Pregenerated sensors for G6PC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005232Ensembl transcript IDs: ENSMUST00000005364.12, ENSMUST00000112317.3
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAGTCCAGCAAAAGGCGTGCTGTCAATGTGGATCCAGTCTGGGTTaGCACACCACTTTTTGGCGATGGGCACGGACCACAGCAGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: RVQQKACCQCGSSLG*HTTFWRWARTTAGQ Trigger: TTGACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTGCTGGACTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 90 bp | TCTCACGAGTCCAGCAAAAGGCGTGCTGTCAATGTGGATCCAGTCTaGGTTGGCACACCACTTTTTGGCGATGGGCACGGACCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SHESSKRRAVNVDPV*VGTPLFGDGHGPQQ Trigger: CTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTGCTGGACTCGTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 90 bp | TGTCAATGTGGATCCAGTCTGGGTTGGCACACCACTTTTTGGCGATaGGCACGGACCACAGCAGGTCAATACCGAACAGTCGGAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: CQCGSSLGWHTTFWR*ARTTAGQYRTVGEA Trigger: TGCTTCTCCGACTGTTCGGTATTGACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 90 bp | TTGTGGTCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTTaGTGCCATTTTCTCCCTGGCAGCTCCGAAGGAACATTTCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: LWSVRSEHRASGSSA*CHFLPGSSEGTFLS Trigger: ACTCAGAAATGTTCCTTCGGAGCTGCCAGGGAGAAAATGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGACCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR TCA 90 bp | TGGTGCCATTTTCTCCCTGGCAGCTCCGAAGGAACATTTCTGAGTTaGTGGCGAAACCCAAGCCAAAGAGGACCCCGAGGTTTCTCACGA | + |
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Preference number: 1 (lower is better) Translates to: WCHFLPGSSEGTFLS*WRNPSQRGPRGFSR Trigger: TCGTGAGAAACCTCGGGGTCCTCTTTGGCTTGGGTTTCGCCATCAACTCAGAAATGTTCCTTCGGAGCTGCCAGGGAGAAAATGGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR TCA 90 bp | CCCAGTCTCTGTGCTGTGGCTCTATTGAGGAAAACAGAAAGTAGGTaGTCCTCAGACCACAGGGCACTGCAGCTCTATTTAGTCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: PSLCAVALLRKTESR*SSDHRALQLYLVFL Trigger: CAAGAAGACTAAATAGAGCTGCAGTGCCCTGTGGTCTGAGGATCACCTACTTTCTGTTTTCCTCAATAGAGCCACAGCACAGAGACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR GCA 90 bp | GATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTaGACTATTACAGTCAAGTTACTTGATCTGAACAAACCTCTATTT | + |
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Preference number: 1 (lower is better) Translates to: DICIRSLVFQLWFQP*TITVKLLDLNKPLF Trigger: AAATAGAGGTTTGTTCAGATCAAGTAACTTGACTGTAATAGTGCAGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR CAA 90 bp | ACGAGTCCAGCAAAAGGCGTGCTGTCAATGTGGATCCAGTCTGGGTaGGCACACCACTTTTTGGCGATGGGCACGGACCACAGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSPAKGVLSMWIQSG*AHHFLAMGTDHSRS Trigger: TGACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTGCTGGACTCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGTGGTCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTTGGTGCCAGGTACACACTCAAGCTaGCCATGTGGACTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: IVVSEVRAQSKRKLGLVPGTHSS*PCGLLE Trigger: CTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACC...TGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGACCACAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGATGGCGAAACCCAAGCCAAAGAGGACCCCGAGGTTTCTCACGAGTCCAGCTGGCACACCACTTTTTaGCGATGGGCACGGACCACA | + |
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Preference number: 2 (lower is better) Translates to: VDGETQAKEDPEVSHESSWHTTF*RWARTT Trigger: TGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCA...GCTGGACTCGTGAGAAACCTCGGGGTCCTCTTTGGCTTGGGTTTCGCCATCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CAA 90 bp | ATTGTGGTCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTaGGTGCCATTTTCTCCCTGGCAGCTCCGAAGGAACATTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: IVVSEVRAQSKRKLG*VPFSPWQLRRNISE Trigger: CTCAGAAATGTTCCTTCGGAGCTGCCAGGGAGAAAATGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGACCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTTGGTGCCATTTTCTCCGCTCCCAGTCTCTGTaGTGTGGCTCTATTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SVRSEHRASGSSAWCHFLRSQSL*CGSIEE Trigger: TTCCTCAATAGAGCCACAGCACAGAGACTGGGAGCG...GAGAAAATGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTACCACTTTTTGGCGATaGGCACGGACCACAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LIEIYVSEALCSNSGFNPTTFWR*ARTTAG Trigger: ACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGT...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR TCA 90 bp | AGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGGTGTGGTCCACAGGAGCCTaGAGTAGCCAGACTTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: SISQAECSIPMPFLKTWVWSTGA*SSQTLR Trigger: TCTTAAAGTCTGGCTACTTCAGGCTCCTGTGGACCA...CACCCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR GCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTCGCTCCCAGTCTCTGTaGTGTGGCTCTATTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LIEIYVSEALCSNSGFNPRSQSL*CGSIEE Trigger: TTCCTCAATAGAGCCACAGCACAGAGACTGGGAGCG...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGAAAACAGAAAGTAGGTaGTCCTCAGACCACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LSISQAECSIPMPFLKTWKTESR*SSDHRA Trigger: TGCCCTGTGGTCTGAGGATCACCTACTTTCTGTTTT...CCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR TCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTAAAACAGAAAGTAGGTaGTCCTCAGACCACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LIEIYVSEALCSNSGFNPKTESR*SSDHRA Trigger: TGCCCTGTGGTCTGAGGATCACCTACTTTCTGTTTT...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CCA 90 bp | AGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGGTGAGTCTTTCTGCTAACTaGAATGTAAGCATCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SISQAECSIPMPFLKTWVSLSAN*NVSIQP Trigger: GGGCTGGATGCTTACATTCCAGTTAGCAGAAAGACT...CACCCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGAATGTGGATCCAGTCTaGGTTGGCACACCACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSISQAECSIPMPFLKTWNVDPV*VGTPLF Trigger: AAAAAGTGGTGTGCCAACCCAGACTGGATCCACATT...CCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGTCTCCTGGGGGTTTTGTTaGCTGCTAAATACTATGATT | + |
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Preference number: 2 (lower is better) Translates to: VFTWVIPSLICYRIVSFVSWGFC*LLNTMI Trigger: AATCATAGTATTTAGCAGTCAACAAAACCCCCAGGA...GACAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR CAA 90 bp | AGAAAGAAAGAAAGCATTCTTATAGAGATATATGTATCAGAAGCCTaGTGTTCCAACTCTGGTTTCAACCCTGCACTATTACAGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RKKESILIEIYVSEA*CSNSGFNPALLQSS Trigger: ACTTGACTGTAATAGTGCAGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAGAATGCTTTCTTTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTTGGTGCCATTTTCTCTTGGCACACCACTTTTaGGCGATGGGCACGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: SVRSEHRASGSSAWCHFLLAHHF*AMGTDH Trigger: GTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAA...GAGAAAATGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | GGATCCAGTCTGGGTTGGCACACCACTTTTTGGCGATaGGCACGGACCACAGCAGGTCAATACCGAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: GSSLGWHTTFWR*ARTTAGQYRTV Trigger: GACTGTTCGGTATTGACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | CAAAAGGCGTGCTGTCAATGTGGATCCAGTCTGGGTTaGCACACCACTTTTTGGCGATGGGCACGGACCACA | + |
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Preference number: 3 (lower is better) Translates to: QKACCQCGSSLG*HTTFWRWARTT Trigger: TGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | TCCAGCAAAAGGCGTGCTGTCAATGTGGATCCAGTCTaGGTTGGCACACCACTTTTTGGCGATGGGCACGGA | + |
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Preference number: 3 (lower is better) Translates to: SSKRRAVNVDPV*VGTPLFGDGHG Trigger: TCCGTGCCCATCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR TCA 72 bp | TTTCTCCCTGGCAGCTCCGAAGGAACATTTCTGAGTTaGTGGCGAAACCCAAGCCAAAGAGGACCCCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: FLPGSSEGTFLS*WRNPSQRGPRG Trigger: ACCTCGGGGTCCTCTTTGGCTTGGGTTTCGCCATCAACTCAGAAATGTTCCTTCGGAGCTGCCAGGGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | ACATGTCTGTGGGTGGAGCAGGACCTTTGGTCATCATaGTGTGACCTCTGTAGAGACGCTCCCAGTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TCLWVEQDLWSS*CDLCRDAPSLC Trigger: ACAGAGACTGGGAGCGTCTCTACAGAGGTCACACCATGATGACCAAAGGTCCTGCTCCACCCACAGACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | TTTCTCACGAGTCCAGCAAAAGGCGTGCTGTCAATGTaGATCCAGTCTGGGTTGGCACACCACTTTTTGGCG | + |
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Preference number: 3 (lower is better) Translates to: FLTSPAKGVLSM*IQSGLAHHFLA Trigger: CGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCACATTGACAGCACGCCTTTTGCTGGACTCGTGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR TCA 72 bp | TGTGCTGTGGCTCTATTGAGGAAAACAGAAAGTAGGTaGTCCTCAGACCACAGGGCACTGCAGCTCTATTTA | + |
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Preference number: 3 (lower is better) Translates to: CAVALLRKTESR*SSDHRALQLYL Trigger: TAAATAGAGCTGCAGTGCCCTGTGGTCTGAGGATCACCTACTTTCTGTTTTCCTCAATAGAGCCACAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGAATTGACTCCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCATGGATCCAGTCTGGGTaGGCACACCACTTTTTGGCG | + |
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Preference number: 3 (lower is better) Translates to: KELTPKSKSRPWSLLSGPWIQSG*AHHFLA Trigger: CGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCA...TGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGGAGTCAATTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | TTGACTCCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGAGCGATAAAGTTGCATaGTGGTCAGTGAGGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LTPKSKSRPWSLLSGPQESDKVA*WSVRSE Trigger: CTCTGACCTCACTGACCACAATGCAACTTTATCGCT...CTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGGAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | TTGACTCCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGTGTGCTGTGGCTCTATaGAGGAAAACAGAAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: LTPKSKSRPWSLLSGPQECAVAL*RKTESR Trigger: CCTACTTTCTGTTTTCCTCAATAGAGCCACAGCACA...CTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATCAGCTCCTGGGGGTTTaGTTGACTGCTAAATACTAT | + |
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Preference number: 3 (lower is better) Translates to: APVNCLYMGYTISHMLPYQLLGV*LTAKYY Trigger: ATAGTATTTAGCAGTCAACAAAACCCCCAGGAGCTG...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGAGGAAGAGGAAGACGTaGGTCTTCAGGTACACACTC | + |
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Preference number: 3 (lower is better) Translates to: LSLHGLYHLSYVTVLSVLRKRKT*VFRYTL Trigger: GAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCT...CAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | AGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGGTGCTCCTGGGGGTTTTGTaGACTGCTAAATACTATGAT | + |
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Preference number: 3 (lower is better) Translates to: SISQAECSIPMPFLKTWVLLGVL*TAKYYD Trigger: ATCATAGTATTTAGCAGTCAACAAAACCCCCAGGAG...CACCCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR-3UTR CAA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTCAGCTCCTGGGGGTTTaGTTGACTGCTAAATACTAT | + |
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Preference number: 3 (lower is better) Translates to: LIEIYVSEALCSNSGFNPQLLGV*LTAKYY Trigger: ATAGTATTTAGCAGTCAACAAAACCCCCAGGAGCTG...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR CCA 72 bp | CAGCGTTTATTGAAATATATACAGCCATTGCTAGCCTaGAAAAGACACTGTACTCTGAGCATAAGTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: QRLLKYIQPLLA*KRHCTLSISQA Trigger: TGCTTGACTTATGCTCAGAGTACAGTGTCTTTTCCAGGCTAGCAATGGCTGTATATATTTCAATAAACGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| 3UTR TCA 72 bp | CTGGTTTCAACCCTGCACTATTACAGTCAAGTTACTTaGTCTGAACAAACCTCTATTTCCTTATCTGATACA | + |
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Preference number: 3 (lower is better) Translates to: LVSTLHYYSQVT*SEQTSISLSDT Trigger: TGTATCAGATAAGGAAATAGAGGTTTGTTCAGATCAAGTAACTTGACTGTAATAGTGCAGGGTTGAAACCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| CDS-3UTR GCA 90 bp | TCAGTGAGGTCAGAGCACAGAGCAAGCGGAAGCTCGGCTTGGTGCCATTTTCTCCTACTAGCATCCCTGTaGAGAGTGACAGAGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SVRSEHRASGSSAWCHFLLLASL*RVTEDS Trigger: GGAGTCCTCTGTCACTCTGCACAGGGATGCTAGTAG...GAGAAAATGGCACCAAGCCGAGCTTCCGCTTGCTCTGTGCTCTGACCTCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| 3UTR CAA 72 bp | TTTTCTCCCTGGCAGCTCCGAAGGAACATTTCTGAGTaGATGGCGAAACCCAAGCCAAAGAGGACCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FSPWQLRRNISE*MAKPKPKRTPR Trigger: CCTCGGGGTCCTCTTTGGCTTGGGTTTCGCCATCAACTCAGAAATGTTCCTTCGGAGCTGCCAGGGAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGGGAAGCTCGGCTTGGTaGCATTTTCTCCCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAPVNCLYMGYTISHMLPGSSAW*HFLPGS Trigger: GCTGCCAGGGAGAAAATGGCACCAAGCCGAGCTTCC...CGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
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| CDS-3UTR CCA 90 bp | TTGACTCCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGGATGAGCCCATTGCGTaGCCAGATGGACTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LTPKSKSRPWSLLSGPQEDEPIA*PDGLPG Trigger: CCCAGGAAGTCCATCTGGCCACGCAATGGGCTCATC...CTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGGAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| CDS-3UTR CCA 90 bp | CCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGCCTGAAACCACTTTTTGGCGATaGGCACGGACCACAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PKSKSRPWSLLSGPQEPETTFWR*ARTTAG Trigger: ACCTGCTGTGGTCCGTGCCCATCGCCAAAAAGTGGT...TTCAGGCTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
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| CDS-3UTR CCA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATGATGAGCCCATTGCGTaGCCAGATGGACTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: APVNCLYMGYTISHMLPYDEPIA*PDGLPG Trigger: CCCAGGAAGTCCATCTGGCCACGCAATGGGCTCATC...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
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| CDS-3UTR CCA 90 bp | TCCAGCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCTGGCACACCACTTTTTaGCGATGGGCACGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SSPCQLSLHGLYHLSYVTWHTTF*RWARTT Trigger: TGTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCA...GGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
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| CDS-3UTR TCA 90 bp | GGGCAAACAGGAAGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTGGCCACTCAAGACATGGGCTTaGATGATTTGGATAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: GQTGRGRRWSSGTHSSWPLKTWA*MIWINL Trigger: GAGATTTATCCAAATCATTCAAGCCCATGTCTTGAG...TGGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCTGTTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
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| CDS-3UTR CCA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATGGCCATGTGGACTCCTaGAGTGTGTTCAAAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APVNCLYMGYTISHMLPYGHVDS*SVFKGL Trigger: GAGGCCTTTGAACACACTCCAGGAGTCCACATGGCC...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CCA 90 bp | CCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGCCTGAAGATAAAGTTGCATTGTaGTCAGTGAGGTCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSKSRPWSLLSGPQEPEDKVAL*SVRSEH Trigger: GTGCTCTGACCTCACTGACCACAATGCAACTTTATC...TTCAGGCTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR GCA 90 bp | TCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTGACCAGGTCAGTCTGTaGAGAGTGACAGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVFTWVIPSLICYRIVSDQVSL*RVTEDS Trigger: GGAGTCCTCTGTCACTCTGCACAGACTGACCTGGTC...ACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGGGTACACACTCAAGCTaGCCATGTGGACTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLHGLYHLSYVTVLSVLGTHSS*PCGLLE Trigger: CTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACC...CAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTGGATCCAGTCTGGGTTaGCACACCACTTTTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIEIYVSEALCSNSGFNPGSSLG*HTTFWR Trigger: TCGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCC...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTTTGCATTGTGGTCAGTaGGGTCAGAGCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIEIYVSEALCSNSGFNPLHCGQ*GQSTEQ Trigger: TTGCTCTGTGCTCTGACCTCACTGACCACAATGCAA...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR GCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTGTCCAGCAAAAGGCGTaGTGTCAATGTGGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIEIYVSEALCSNSGFNPVQQKA*CQCGSS Trigger: ACTGGATCCACATTGACAGCACGCCTTTTGCTGGAC...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGCTCAAGCTGGCCATGTaGACTCCTGGAGTGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLHGLYHLSYVTVLSVLLKLAM*TPGVCS Trigger: TGAACACACTCCAGGAGTCCACATGGCCAGCTTGAG...CAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCTTGAGATGCAGACGCTaGTTTGAATCAACCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPCQLSLHGLYHLSYVTLRCRR*FESTRK Trigger: TTTTCTGGTTGATTCAAATCAGCGTCTGCATCTCAA...GGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGACTCCAAGAATGACCTaGTGGGGGAAATGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHGLYHLSYVTVLSVLTPRMT*WGKCVA Trigger: AGCCACACATTTCCCCCATCAGGTCATTCTTGGAGT...CAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTCAATCACTCCAAGAATaGCCTGATGGGGGAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIEIYVSEALCSNSGFNPQSLQE*PDGGNV Trigger: CACATTTCCCCCATCAGGTCATTCTTGGAGTGATTG...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATCTCAAGACATGGGCTTaGATGATTTGGATAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: APVNCLYMGYTISHMLPYLKTWA*MIWINL Trigger: GAGATTTATCCAAATCATTCAAGCCCATGTCTTGAG...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CCA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTAATGTGGATCCAGTCTaGGTTGGCACACCACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIEIYVSEALCSNSGFNPNVDPV*VGTPLF Trigger: AAAAAGTGGTGTGCCAACCCAGACTGGATCCACATT...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | GTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGTCGGCTATGAATACTCTTaGGATGCAGACGCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTWVIPSLICYRIVSFVGYEYS*DADADL Trigger: CAAATCAGCGTCTGCATCTCAAGAGTATTCATAGCC...GACAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR TCA 90 bp | GTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGTCGGAAATGTGTGGCTATaGATACTCTTGAGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFTWVIPSLICYRIVSFVGNVWL*ILLRCR Trigger: TCTGCATCTCAAGAGTATTCATAGCCACACATTTCC...GACAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| 3UTR CAA 72 bp | GAAAGCATTCTTATAGAGATATATGTATCAGAAGCCTaGTGTTCCAACTCTGGTTTCAACCCTGCACTATTA | + |
|
Preference number: 4 (lower is better) Translates to: ESILIEIYVSEA*CSNSGFNPALL Trigger: TAATAGTGCAGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAGAATGCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| 3UTR CAA 72 bp | TTACATGGGTTATACCATCTCTCATATGTTACCGTATaGTCAGTTTTGTCAAGAAAATATGGACTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHGLYHLSYVTV*SVLSRKYGLSG Trigger: ACCAGAAAGTCCATATTTTCTTGACAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGAGCAGGACCTTTGGTCATCATGGTGTGACCTCTGTAGAGACGCTCCCAAGCGGAAGCTCGGCTaGGTGCCATTTTCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WVEQDLWSSWCDLCRDAPKRKLG*VPFSPW Trigger: CCAGGGAGAAAATGGCACCAAGCCGAGCTTCCGCTT...GGGAGCGTCTCTACAGAGGTCACACCATGATGACCAAAGGTCCTGCTCCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGGTCATCATGGTGTGACCTCTGTAGAGACGCTCCCAGTCTCTGTGCTGCGCACGATGAGCCCATaGCGTGGCCAGATGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFGHHGVTSVETLPVSVLRTMSP*RGQMDF Trigger: GAAGTCCATCTGGCCACGCAATGGGCTCATCGTGCG...CAGCACAGAGACTGGGAGCGTCTCTACAGAGGTCACACCATGATGACCAAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS CCA 90 bp | AAGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTGGCCATGTaGACTCCTGGAGTGTGTTCAAAGGCCTCGGCTACTAGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRKTLVFRYTLKLAM*TPGVCSKASATSIP Trigger: TGGGATGCTAGTAGCCGAGGCCTTTGAACACACTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS CCA 90 bp | CAAACAGGAAGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTaGCCATGTGGACTCCTGGAGTGTGTTCAAAGGCCTCGGCTACTA | + |
|
Preference number: 5 (lower is better) Translates to: QTGRGRRWSSGTHSS*PCGLLECVQRPRLL Trigger: TAGTAGCCGAGGCCTTTGAACACACTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS TCA 90 bp | AAGGCCTCGGCTACTAGCATCCCACCAATCACTCCAAGAATGACCTaGTGGGGGAAATGTGTGGCTATGAATACTCTTGAGATGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KASATSIPPITPRMT*WGKCVAMNTLEMQT Trigger: CGTCTGCATCTCAAGAGTATTCATAGCCACACATTTCCCCCATCAGGTCATTCTTGGAGTGATTGGTGGGATGCTAGTAGCCGAGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | TTGACTCCTAAAAGTAAAAGTAGACCGTGGTCACTTCTAAGTGGTCCACAGGAGTTGGCACACCACTTTTaGGCGATGGGCACGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTPKSKSRPWSLLSGPQELAHHF*AMGTDH Trigger: GTGGTCCGTGCCCATCGCCAAAAAGTGGTGTGCCAA...CTCCTGTGGACCACTTAGAAGTGACCACGGTCTACTTTTACTTTTAGGAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTGGCCATGTGGACATAAATCTCAGTTTCTaGTATCCACCAGTAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QEEEDVGLQVHTQAGHVDINLSF*YPPVRT Trigger: CGTCCTTACTGGTGGATACAAGAAACTGAGATTTAT...GTCCACATGGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAACAGGAAGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTGGCCGCTCAAGACATGGGCTaGAATGATTTGGATAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RANRKRKTLVFRYTLKLAAQDMG*NDLDKS Trigger: AGATTTATCCAAATCATTCAAGCCCATGTCTTGAGC...GGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCTGTTTGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | CTTATAGAGATATATGTATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTCGCACGATGAGCCCATaGCGTGGCCAGATGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIEIYVSEALCSNSGFNPRTMSP*RGQMDF Trigger: GAAGTCCATCTGGCCACGCAATGGGCTCATCGTGCG...AGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATACATATATCTCTATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | AGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGGTGTGGATCCAGTCTGGGTaGGCACACCACTTTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SISQAECSIPMPFLKTWVWIQSG*AHHFLA Trigger: CGCCAAAAAGTGGTGTGCCAACCCAGACTGGATCCA...CACCCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS TCA 90 bp | TCCAAGAATGACCTGATGGGGGAAATGTGTGGCTATGAATACTCTTaGGATGCAGACGCTGATTTGAATCAACCAGAAAACACTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SKNDLMGEMCGYEYS*DADADLNQPENTPQ Trigger: CTGTGGAGTGTTTTCTGGTTGATTCAAATCAGCGTCTGCATCTCAAGAGTATTCATAGCCACACATTTCCCCCATCAGGTCATTCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | CTGAGCATAAGTCAAGCAGAATGTAGCATTCCAATGCCATTTCTGAAAACATGGAGGAAGAGGAAGACGTaGGTCTTCAGGTACACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LSISQAECSIPMPFLKTWRKRKT*VFRYTL Trigger: GAGTGTGTACCTGAAGACCAACGTCTTCCTCTTCCT...CCATGTTTTCAGAAATGGCATTGGAATGCTACATTCTGCTTGACTTATGCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS TCA 90 bp | TGGGCCTGTTTCACACGTAGTAGGAAACTGCTCAAGACATGGGCTTaGATGATTTGGATAAATCTCAGTTTCTTGTATCCACCAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WACFTRSRKLLKTWA*MIWINLSFLYPPVR Trigger: CCTTACTGGTGGATACAAGAAACTGAGATTTATCCAAATCATTCAAGCCCATGTCTTGAGCAGTTTCCTACTACGTGTGAAACAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTGCACTATTACAGTCAAGGATGCAGACGCTGATTaGAATCAACCAGAAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: IRSLVFQLWFQPCTITVKDADAD*NQPENT Trigger: AGTGTTTTCTGGTTGATTCAAATCAGCGTCTGCATC...CTTGACTGTAATAGTGCAGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATCGGGGGTCTCCAACATaGGACATAAAATTTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: APVNCLYMGYTISHMLPYRGSPT*DIKFRK Trigger: TTTTCTAAATTTTATGTCCAATGTTGGAGACCCCCG...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | TATCAGAAGCCTTGTGTTCCAACTCTGGTTTCAACCCTGCACTATTACAGTCAACATTTAAATATGAGATaGAACCAGTCCCCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: YQKPCVPTLVSTLHYYSQHLNMR*NQSPMT Trigger: GGTCATAGGGGACTGGTTCAATCTCATATTTAAATG...TTGACTGTAATAGTGCAGGGTTGAAACCAGAGTTGGAACACAAGGCTTCTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATATAAATCTCAGTTTCTaGTATCCACCAGTAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: APVNCLYMGYTISHMLPYINLSF*YPPVRT Trigger: CGTCCTTACTGGTGGATACAAGAAACTGAGATTTAT...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGTCAACTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATGCTCAAGACATGGGCTaGAATGATTTGGATAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: APVNCLYMGYTISHMLPYAQDMG*NDLDKS Trigger: AGATTTATCCAAATCATTCAAGCCCATGTCTTGAGC...ATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAGTTGACAGGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGAGCGATAAAGTTGCATaGTGGTCAGTGAGGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLHGLYHLSYVTVLSVLSDKVA*WSVRSE Trigger: CTCTGACCTCACTGACCACAATGCAACTTTATCGCT...CAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS-3UTR CAA 90 bp | GTCTTTACATGGGTTATACCATCTCTCATATGTTACCGTATTGTCAGTTTTGTCCATTTAAATATGAGATaGAACCAGTCCCCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: VFTWVIPSLICYRIVSFVHLNMR*NQSPMT Trigger: GGTCATAGGGGACTGGTTCAATCTCATATTTAAATG...GACAAAACTGACAATACGGTAACATATGAGAGATGGTATAACCCATGTAAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS CCA 72 bp | ACCATGACATACCAGACGCACGATGAGCCCATTGCGTaGCCAGATGGACTTCCTGGGCCTGTTTCACACGTA | + |
|
Preference number: 6 (lower is better) Translates to: TMTYQTHDEPIA*PDGLPGPVSHV Trigger: TACGTGTGAAACAGGCCCAGGAAGTCCATCTGGCCACGCAATGGGCTCATCGTGCGTCTGGTATGTCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||
| CDS CCA 72 bp | ACGTTGGTCTTCAGGTACACACTCAAGCTGGCCATGTaGACTCCTGGAGTGTGTTCAAAGGCCTCGGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: TLVFRYTLKLAM*TPGVCSKASAT Trigger: AGTAGCCGAGGCCTTTGAACACACTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACCTGAAGACCAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS CCA 72 bp | AGAGGAAGACGTTGGTCTTCAGGTACACACTCAAGCTaGCCATGTGGACTCCTGGAGTGTGTTCAAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RGRRWSSGTHSS*PCGLLECVQRP Trigger: AGGCCTTTGAACACACTCCAGGAGTCCACATGGCCAGCTTGAGTGTGTACCTGAAGACCAACGTCTTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS TCA 72 bp | GCTACTAGCATCCCACCAATCACTCCAAGAATGACCTaGTGGGGGAAATGTGTGGCTATGAATACTCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATSIPPITPRMT*WGKCVAMNTLE Trigger: CTCAAGAGTATTCATAGCCACACATTTCCCCCATCAGGTCATTCTTGGAGTGATTGGTGGGATGCTAGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS TCA 72 bp | GACCTGATGGGGGAAATGTGTGGCTATGAATACTCTTaGGATGCAGACGCTGATTTGAATCAACCAGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: DLMGEMCGYEYS*DADADLNQPEN Trigger: GTTTTCTGGTTGATTCAAATCAGCGTCTGCATCTCAAGAGTATTCATAGCCACACATTTCCCCCATCAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005364.12 |
||
| CDS CAA 72 bp | GGACGATGGCCAAACAATATCCATTTAAATATGAGATaGAACCAGTCCCCTATGACCGCTACCCAGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: GRWPNNIHLNMR*NQSPMTATQII Trigger: GATGATCTGGGTAGCGGTCATAGGGGACTGGTTCAATCTCATATTTAAATGGATATTGTTTGGCCATCGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005364.12 ENSMUST00000112317.3 |
||