Pregenerated sensors for G6PC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078650Ensembl transcript IDs: ENSMUST00000019469.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCACCGCAAGAGCATTCTCAGTTGGGATCTCTAGCCTGGGCTTaGTCTTCTGTATCCGACAGGAGGCTGGTAAGCGAATCTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SAPQEHSQLGSLAWA*SSVSDRRLVSESSG Trigger: CCCTGAAGATTCGCTTACCAGCCTCCTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTGCGGTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CCA 90 bp | AAGACAGGGCTACCAGGGCCGATGTCAACACCTCTGGCCTCACAATaGGTTTCAGAGGCTTTAGTTGTTCCTAGTCCTTTGCATGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: KTGLPGPMSTPLASQ*VSEALVVPSPLHGG Trigger: ACCGCCATGCAAAGGACTAGGAACAACTAAAGCCTCTGAAACCCATTGTGAGGCCAGAGGTGTTGACATCGGCCCTGGTAGCCCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR TCA 90 bp | GAGAATTCTGGGGAATGCAGACATAGGCTGAGGAGGAGAAAACTGTaGCGTGATAGAGAAGGTGGTGTGAGAGACAGTCACCACTACCAT | + |
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Preference number: 1 (lower is better) Translates to: ENSGECRHRLRRRKL*RDREGGVRDSHHYH Trigger: ATGGTAGTGGTGACTGTCTCTCACACCACCTTCTCTATCACGTCACAGTTTTCTCCTCCTCAGCCTATGTCTGCATTCCCCAGAATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR GCA 90 bp | ACACAGACACAACTGAAGCCGGTTAGACATAGATTGCATCTGGTTTaGTCGATACATAAAACACTCTCCCTCCTCCTGATCCTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: TQTQLKPVRHRLHLV*SIHKTLSLLLILLS Trigger: AGAAAGAAGGATCAGGAGGAGGGAGAGTGTTTTATGTATCGAGCAAACCAGATGCAATCTATGTCTAACCGGCTTCAGTTGTGTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 90 bp | TCCTTTTCCCAGCCGGAAGATTCTGCACCGCAAGAGCATTCTCAGTaGGGATCTCTAGCCTGGGCTTGCTCTTCTGTATCCGACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SFSQPEDSAPQEHSQ*GSLAWACSSVSDRR Trigger: CCTCCTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTGCGGTGCAGAATCTTCCGGCTGGGAAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAGGGCCAGGGAACAAGTaGAGAATTCTGGGGAATGCA | + |
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Preference number: 2 (lower is better) Translates to: TLQKHQQTVAYQTQQGPAGPGNK*RILGNA Trigger: TGCATTCCCCAGAATTCTCCACTTGTTCCCTGGCCC...TGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCCGAGGCAGGAGGACAGTCACCAAGGGGCTGCCTTTTCTTCTAAGAATGCCTCTGGCCTCACAATaGGTTTCAGAGGCTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: ISRGRRTVTKGLPFLLRMPLASQ*VSEALV Trigger: AACTAAAGCCTCTGAAACCCATTGTGAGGCCAGAGG...CATTCTTAGAAGAAAAGGCAGCCCCTTGGTGACTGTCCTCCTGCCTCGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR TCA 90 bp | CTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAGCAAATGCAGACATAGGCTaGGGAGGAGAAAACTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LQKHQQTVAYQTQQGPAANADIG*GGENCD Trigger: GTCACAGTTTTCTCCTCCTCAGCCTATGTCTGCATT...TGCTGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR GCA 90 bp | CGTGATAGAGAAGGTGGTGTGAGAGACAGTCACCACTACCATACAGGAATGCAACTGGCAAATGCATGGTaGTCTTTTCCTTTTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RDREGGVRDSHHYHTGMQLANAW*SFPFPS Trigger: GCTGGGAAAAGGAAAAGAGCACCATGCATTTGCCAG...TTGCATTCCTGTATGGTAGTGGTGACTGTCTCTCACACCACCTTCTCTATCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGGAGAGAAGAATCCTGGGTCTCCTTGCCATTTTGCCCAAGATCTCAGAGTTAGGAGGAGAAAACTGTaGCGTGATAGAGAAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: FGEKNPGSPCHFAQDLRVRRRKL*RDREGG Trigger: ACCACCTTCTCTATCACGTCACAGTTTTCTCCTCCT...AACTCTGAGATCTTGGGCAAAATGGCAAGGAGACCCAGGATTCTTCTCTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGAAGTACTCTGCAAATCAGCCGAGGCAGGAGGACAGTCACCAAGGGGCTGATTTTTATGTACAGTaGAGACTATCTGGAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LKKYSANQPRQEDSHQGADFYVQ*RLSGSR Trigger: TCTGCTTCCAGATAGTCTCCACTGTACATAAAAATC...AGCCCCTTGGTGACTGTCCTCCTGCCTCGGCTGATTTGCAGAGTACTTCTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAAGATTGCATCTGGTTTaGTCGATACATAAAACACTC | + |
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Preference number: 2 (lower is better) Translates to: TLQKHQQTVAYQTQQGPARLHLV*SIHKTL Trigger: GAGTGTTTTATGTATCGAGCAAACCAGATGCAATCT...TGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 90 bp | TCGTATCTAAAAACACAGACACAACTGAAGCCGGTTAGACATAGATaGCATCTGGTTTGCTCGATACATAAAACACTCTCCCTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SYLKTQTQLKPVRHR*HLVCSIHKTLSLLL Trigger: CAGGAGGAGGGAGAGTGTTTTATGTATCGAGCAAACCAGATGCAATCTATGTCTAACCGGCTTCAGTTGTGTCTGTGTTTTTAGATACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CCA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCTTGGGATCTCTAGCCTaGGCTTGCTCTTCTGTATCC | + |
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Preference number: 2 (lower is better) Translates to: AHSVIFMYSGDYLEAELILGSLA*ACSSVS Trigger: GGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAA...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGCCATTTTGCCCAAGATCTCAGAGTTTAACTTAACCCTACAAAAGCACCCTTCTTTCTCTTCCTaGCAAATGCATGGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLAILPKISEFNLTLQKHPSFSS*QMHGAL Trigger: AAGAGCACCATGCATTTGCCAGGAAGAGAAAGAAGG...GTGCTTTTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGCAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 90 bp | GCCTTTAACTGGCTACTCATTACACTAGTTGGTCTATTATTATTATaGAGTGTGTCGTATCTAAAAACACAGACACAACTGAAGCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: AFNWLLITLVGLLLL*SVSYLKTQTQLKPV Trigger: AACCGGCTTCAGTTGTGTCTGTGTTTTTAGATACGACACACTCAATAATAATAATAGACCAACTAGTGTAATGAGTAGCCAGTTAAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CCA 72 bp | GCACCGCAAGAGCATTCTCAGTTGGGATCTCTAGCCTaGGCTTGCTCTTCTGTATCCGACAGGAGGCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: APQEHSQLGSLA*ACSSVSDRRLV Trigger: TACCAGCCTCCTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTGCGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR GCA 72 bp | CAAGAGCATTCTCAGTTGGGATCTCTAGCCTGGGCTTaGTCTTCTGTATCCGACAGGAGGCTGGTAAGCGAA | + |
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Preference number: 3 (lower is better) Translates to: QEHSQLGSLAWA*SSVSDRRLVSE Trigger: TTCGCTTACCAGCCTCCTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR TCA 72 bp | GGGGAATGCAGACATAGGCTGAGGAGGAGAAAACTGTaGCGTGATAGAGAAGGTGGTGTGAGAGACAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GECRHRLRRRKL*RDREGGVRDSH Trigger: GTGACTGTCTCTCACACCACCTTCTCTATCACGTCACAGTTTTCTCCTCCTCAGCCTATGTCTGCATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR GCA 72 bp | CATGGTGCTCTTTTCCTTTTCCCAGCCGGAAGATTCTaGACCGCAAGAGCATTCTCAGTTGGGATCTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: HGALFLFPAGRF*TARAFSVGISS Trigger: GCTAGAGATCCCAACTGAGAATGCTCTTGCGGTGCAGAATCTTCCGGCTGGGAAAAGGAAAAGAGCACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CCA 72 bp | CTACCAGGGCCGATGTCAACACCTCTGGCCTCACAATaGGTTTCAGAGGCTTTAGTTGTTCCTAGTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LPGPMSTPLASQ*VSEALVVPSPL Trigger: CAAAGGACTAGGAACAACTAAAGCCTCTGAAACCCATTGTGAGGCCAGAGGTGTTGACATCGGCCCTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR TCA 72 bp | GGAGGAGAAAACTGTGACGTGATAGAGAAGGTGGTGTaGGAGACAGTCACCACTACCATACAGGAATGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GGENCDVIEKVV*ETVTTTIQECK Trigger: CTTGCATTCCTGTATGGTAGTGGTGACTGTCTCTCACACCACCTTCTCTATCACGTCACAGTTTTCTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR TCA 72 bp | AACAAGTGGAGAATTCTGGGGAATGCAGACATAGGCTaGGGAGGAGAAAACTGTGACGTGATAGAGAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: NKWRILGNADIG*GGENCDVIEKV Trigger: CACCTTCTCTATCACGTCACAGTTTTCTCCTCCTCAGCCTATGTCTGCATTCCCCAGAATTCTCCACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR TCA 72 bp | ATATTTCTGCCCCAGGAATCAAAAATAACATCGGAGTaGCCTTTGGAGAGAAGAATCCTGGGTCTCCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: IFLPQESKITSE*PLERRILGLLA Trigger: GGCAAGGAGACCCAGGATTCTTCTCTCCAAAGGTCACTCCGATGTTATTTTTGATTCCTGGGGCAGAAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR GCA 72 bp | CAACTGAAGCCGGTTAGACATAGATTGCATCTGGTTTaGTCGATACATAAAACACTCTCCCTCCTCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: QLKPVRHRLHLV*SIHKTLSLLLI Trigger: GATCAGGAGGAGGGAGAGTGTTTTATGTATCGAGCAAACCAGATGCAATCTATGTCTAACCGGCTTCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR-3UTR CAA 90 bp | GCCATTTTGCCCAAGATCTCAGAGTTTAACTTAACCCTACAAAAGCACCAACAACCGGTTAGACATAGATaGCATCTGGTTTGCTCGATA | + |
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Preference number: 3 (lower is better) Translates to: AILPKISEFNLTLQKHQQPVRHR*HLVCSI Trigger: TATCGAGCAAACCAGATGCAATCTATGTCTAACCGG...TTGTTGGTGCTTTTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CCA 72 bp | GGAGACTATCTGGAAGCAGAATTAATCGCCTTTAACTaGCTACTCATTACACTAGTTGGTCTATTATTATTA | + |
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Preference number: 3 (lower is better) Translates to: GDYLEAELIAFN*LLITLVGLLLL Trigger: TAATAATAATAGACCAACTAGTGTAATGAGTAGCCAGTTAAAGGCGATTAATTCTGCTTCCAGATAGTCTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | CACCTTTTGGTTAAGATAGCAAAGAAAGACAGGGCTACCAGGGCCGATGTCAACGCTGCGCCCATGGCATaGCCAGAGGGACTTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: HLLVKIAKKDRATRADVNAAPMA*PEGLPG Trigger: ACCAGGAAGTCCCTCTGGCCATGCCATGGGCGCAGC...GTTGACATCGGCCCTGGTAGCCCTGTCTTTCTTTGCTATCTTAACCAAAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 72 bp | GCAAGAGCATTCTCAGTTGGGATCTCTAGCCTGGGCTaGCTCTTCTGTATCCGACAGGAGGCTGGTAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: ARAFSVGISSLG*LFCIRQEAGKR Trigger: TCGCTTACCAGCCTCCTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 72 bp | CAGCCGGAAGATTCTGCACCGCAAGAGCATTCTCAGTaGGGATCTCTAGCCTGGGCTTGCTCTTCTGTATCC | + |
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Preference number: 4 (lower is better) Translates to: QPEDSAPQEHSQ*GSLAWACSSVS Trigger: GGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCTTGCGGTGCAGAATCTTCCGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGAAGTACTCTGCAAATCAGCCGAGGCAGGAGGACAGTCACCAAGGGGCTATGGGAGCAACTTGCTaGGTTCTCCCTTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LKKYSANQPRQEDSHQGAMGATC*VLPCSS Trigger: AGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCAT...AGCCCCTTGGTGACTGTCCTCCTGCCTCGGCTGATTTGCAGAGTACTTCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | ACCCTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAGCAGGCGAAGCGGAATaGGAGCAACTTGCTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TLQKHQQTVAYQTQQGPAAGEAE*EQLAEF Trigger: GAACTCAGCAAGTTGCTCCCATTCCGCTTCGCCTGC...TGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | ACCCTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAATAGTATACACCTGCTaGGCCCATGGCATGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLQKHQQTVAYQTQQGPAIVYTC*AHGMAR Trigger: TCTGGCCATGCCATGGGCGCAGCAGGTGTATACTAT...TGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | AGAGCATTCTCAGTTGGGATCTCTAGCCTGGGCTTGCTCTTCTGTATCCGACAGAGACAGACGTTCAGCTaGACAGCCCAGAATCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RAFSVGISSLGLLFCIRQRQTFS*TAQNPN Trigger: GTTGGGATTCTGGGCTGTGCAGCTGAACGTCTGTCT...CTGTCGGATACAGAAGAGCAAGCCCAGGCTAGAGATCCCAACTGAGAATGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | CTACAAAAGCACCAACAAACAGTTGCCTACCAGACACAGCAGGGTCCAGCAGCATGCAAAGGGAACTGTTaGGCTCTTGCAGAAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: LQKHQQTVAYQTQQGPAACKGNC*ALAERQ Trigger: TTGTCTTTCTGCAAGAGCGCAACAGTTCCCTTTGCA...TGCTGCTGGACCCTGCTGTGTCTGGTAGGCAACTGTTTGTTGGTGCTTTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | CTCCTTGCCATTTTGCCCAAGATCTCAGAGTTTAACTTAACCCTACAAAAGCACAACATAGTATACACCTaGTGCGCCCATGGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLAILPKISEFNLTLQKHNIVYT*CAHGMA Trigger: GGCCATGCCATGGGCGCAGCAGGTGTATACTATGTT...GTGCTTTTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGCAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCCCAAGGAAGCCACAATaGAGGCGAAGCGGAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: AHSVIFMYSGDYLEAELIPRKPQ*RRSGMG Trigger: TCCCATTCCGCTTCGCCTGCATTGTGGCTTCCTTGG...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | CTCCTTGCCATTTTGCCCAAGATCTCAGAGTTTAACTTAACCCTACAAAAGCACAGAGAGTCAAAGAGATaGAGGAGGACCAAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLAILPKISEFNLTLQKHRESKR*RRTKEA Trigger: GGCTTCCTTGGTCCTCCTGCATCTCTTTGACTCTCT...GTGCTTTTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGCAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | CGTGATAGAGAAGGTGGTGTGAGAGACAGTCACCACTACCATACAGGAATGCAAGAACTGTTGCGCTCTTaGAGAAAGACAAGATGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RDREGGVRDSHHYHTGMQELLRS*RKTRCR Trigger: TCTACATCTTGTCTTTCTGCAAGAGCGCAACAGTTC...TTGCATTCCTGTATGGTAGTGGTGACTGTCTCTCACACCACCTTCTCTATCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | CACCTTTTGGTTAAGATAGCAAAGAAAGACAGGGCTACCAGGGCCGATGTCAACCCGGAATCCATACGTTaGCTTTTTCTTTCCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: HLLVKIAKKDRATRADVNPESIR*LFLSSK Trigger: TTTCGAGGAAAGAAAAAGCCAACGTATGGATTCCGG...GTTGACATCGGCCCTGGTAGCCCTGTCTTTCTTTGCTATCTTAACCAAAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 72 bp | CCTTTGGAGAGAAGAATCCTGGGTCTCCTTGCCATTTaGCCCAAGATCTCAGAGTTTAACTTAACCCTACAA | + |
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Preference number: 4 (lower is better) Translates to: PLERRILGLLAI*PKISEFNLTLQ Trigger: TTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGCAAGGAGACCCAGGATTCTTCTCTCCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR TCA 90 bp | TGCACATGTAGTTTTCTTATCAAAGATATTAGAAACAAAGTGCTTGGTGTGGGTGGGTTCCCAGGTTTTTaGAGAGGCTGGCAAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CTCSFLIKDIRNKVLGVGGFPGF*RGWQRV Trigger: CACCCTTTGCCAGCCTCTTCAAAAACCTGGGAACCC...ACCCACACCAAGCACTTTGTTTCTAATATCTTTGATAAGAAAACTACATGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR GCA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCTTTCAGCCACAGCAATaGCTGACAAGACTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AHSVIFMYSGDYLEAELIFQPQQ*LTRLQP Trigger: TGGCTGGAGTCTTGTCAGGCATTGCTGTGGCTGAAA...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR TCA 90 bp | ACACTTTCCTCAAACAGCCCTGTAAGCTTTGTAAAAATTCACCTTTTGGTTAAGTCACAGACACAAGGATaGACCAGTCCTGGGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLSSNSPVSFVKIHLLVKSQTQG*TSPGSL Trigger: AAGACTCCCAGGACTGGTTCATCCTTGTGTCTGTGA...CTTAACCAAAAGGTGAATTTTTACAAAGCTTACAGGGCTGTTTGAGGAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR TCA 90 bp | ACACTTTCCTCAAACAGCCCTGTAAGCTTTGTAAAAATTCACCTTTTGGTTAAGGTCCGGTCTCACAGGTaGCAGGGAACTGCTTTATTA | + |
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Preference number: 4 (lower is better) Translates to: TLSSNSPVSFVKIHLLVKVRSHR*QGTALL Trigger: TAATAAAGCAGTTCCCTGTCACCTGTGAGACCGGAC...CTTAACCAAAAGGTGAATTTTTACAAAGCTTACAGGGCTGTTTGAGGAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | TGCACATGTAGTTTTCTTATCAAAGATATTAGAAACAAAGTGCTTGGTGTGGGTAAGGTGGACCCATTCTaGCCGCTCACACCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CTCSFLIKDIRNKVLGVGKVDPF*PLTPSL Trigger: AAGAGATGGTGTGAGCGGCCAGAATGGGTCCACCTT...ACCCACACCAAGCACTTTGTTTCTAATATCTTTGATAAGAAAACTACATGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | TGCACATGTAGTTTTCTTATCAAAGATATTAGAAACAAAGTGCTTGGTGTGGGTAAGATCAACTCAACCTaGGATGGGGGCTTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CTCSFLIKDIRNKVLGVGKINST*DGGFRE Trigger: CTCTCTGAAGCCCCCATCCCAGGTTGAGTTGATCTT...ACCCACACCAAGCACTTTGTTTCTAATATCTTTGATAAGAAAACTACATGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CCA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCTGGATCCCAAAGTCATaGAGAATGTTCATTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AHSVIFMYSGDYLEAELIWIPKS*RMFIPS Trigger: GGAAGGAATGAACATTCTCCATGACTTTGGGATCCA...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 72 bp | TCAAACAGCCCTGTAAGCTTTGTAAAAATTCACCTTTaGGTTAAGATAGCAAAGAAAGACAGGGCTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SNSPVSFVKIHL*VKIAKKDRATR Trigger: CCTGGTAGCCCTGTCTTTCTTTGCTATCTTAACCAAAAGGTGAATTTTTACAAAGCTTACAGGGCTGTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| 3UTR CAA 72 bp | TGGCTACTCATTACACTAGTTGGTCTATTATTATTATaGAGTGTGTCGTATCTAAAAACACAGACACAACTG | + |
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Preference number: 4 (lower is better) Translates to: WLLITLVGLLLL*SVSYLKTQTQL Trigger: CAGTTGTGTCTGTGTTTTTAGATACGACACACTCAATAATAATAATAGACCAACTAGTGTAATGAGTAGCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS TCA 90 bp | GACAATACTTCCGGAGGCTGGCATTGTAGATGCCCCGGATGTGGCTaGAAGTTTCAGCCACAGCAATGCCTGACAAGACTCCAGCCACGA | + |
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Preference number: 5 (lower is better) Translates to: DNTSGGWHCRCPGCG*KFQPQQCLTRLQPR Trigger: TCGTGGCTGGAGTCTTGTCAGGCATTGCTGTGGCTGAAACTTTCAGCCACATCCGGGGCATCTACAATGCCAGCCTCCGGAAGTATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 90 bp | TTTGAAGAGGCTGGCAAAGGGTGTAGTGTCAAGGTGGACCCATTCTaGCCGCTCACACCATCTCTTAGCTTTCTCCAAAGTCCACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FEEAGKGCSVKVDPF*PLTPSLSFLQSPQE Trigger: CTCCTGTGGACTTTGGAGAAAGCTAAGAGATGGTGTGAGCGGCCAGAATGGGTCCACCTTGACACTACACCCTTTGCCAGCCTCTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCTTTTCCCAGCCGGAAGATTCTGCACCGCAAGAGCATTCTCAGTTGGGACGGAATGGGAGCAACTaGCTGAGTTCTCCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSFSQPEDSAPQEHSQLGRNGSN*LSSPLQ Trigger: CTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCG...TCCCAACTGAGAATGCTCTTGCGGTGCAGAATCTTCCGGCTGGGAAAAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 90 bp | GTTCCCAGGTTTTTGAAGAGGCTGGCAAAGGGTGTAGTGTCAAGGTaGACCCATTCTGGCCGCTCACACCATCTCTTAGCTTTCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: VPRFLKRLAKGVVSR*THSGRSHHLLAFSK Trigger: TTTGGAGAAAGCTAAGAGATGGTGTGAGCGGCCAGAATGGGTCCACCTTGACACTACACCCTTTGCCAGCCTCTTCAAAAACCTGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | ATCAGCCGAGGCAGGAGGACAGTCACCAAGGGGCTGCCTTTTCTTCTAAGAATGCCAAACAGAATCCACTaGAAGACGAGGTTGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: ISRGRRTVTKGLPFLLRMPNRIH*KTRLNQ Trigger: CTGGTTCAACCTCGTCTTCAAGTGGATTCTGTTTGG...CATTCTTAGAAGAAAAGGCAGCCCCTTGGTGACTGTCCTCCTGCCTCGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | GCCATTTTGCCCAAGATCTCAGAGTTTAACTTAACCCTACAAAAGCACCAACAACGGTACATGCTGGAGTaGAGGGCCAGCCCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: AILPKISEFNLTLQKHQQRYMLE*RASPNP Trigger: GGGGTTGGGGCTGGCCCTCAACTCCAGCATGTACCG...TTGTTGGTGCTTTTGTAGGGTTAAGTTAAACTCTGAGATCTTGGGCAAAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 90 bp | GCTCTTGCAGAAAGACAAGATGTAGAAGATCAACTCAACCTGGGATaGGGGCTTCAGAGAGTCAAAGAGATGCAGGAGGACCAAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ALAERQDVEDQLNLG*GLQRVKEMQEDQGS Trigger: GCTTCCTTGGTCCTCCTGCATCTCTTTGACTCTCTGAAGCCCCCATCCCAGGTTGAGTTGATCTTCTACATCTTGTCTTTCTGCAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | TGCATGGTGCTCTTTTCCTTTTCCCAGCCGGAAGATTCTGCACCGCAAGAGCATCCAGTCCTGGGAGTCTaGGTAATTCACTTGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: CMVLFSFSQPEDSAPQEHPVLGV*VIHLEI Trigger: TATCTCCAAGTGAATTACCAAGACTCCCAGGACTGG...ATGCTCTTGCGGTGCAGAATCTTCCGGCTGGGAAAAGGAAAAGAGCACCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | CACCTTTTGGTTAAGATAGCAAAGAAAGACAGGGCTACCAGGGCCGATGTCAACGCCACCCAGAGGAGATaGATGCCCACAGTCTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: HLLVKIAKKDRATRADVNATQRR*MPTVSL Trigger: TAAAGAGACTGTGGGCATCAATCTCCTCTGGGTGGC...GTTGACATCGGCCCTGGTAGCCCTGTCTTTCTTTGCTATCTTAACCAAAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS GCA 90 bp | AAACAGAATCCACTTGAAGACGAGGTTGAACCAGTCTCCGACCACTaGCACCCAGAGGAGATTGATGCCCACAGTCTCTTTAAGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: KQNPLEDEVEPVSDH*HPEEIDAHSLFKME Trigger: TTCCATCTTAAAGAGACTGTGGGCATCAATCTCCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAACCTCGTCTTCAAGTGGATTCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCAGGGTTCCCAGGTTTTaGAAGAGGCTGGCAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: AHSVIFMYSGDYLEAELIRVPRF*KRLAKG Trigger: ACCCTTTGCCAGCCTCTTCAAAAACCTGGGAACCCT...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS-3UTR CAA 90 bp | GCACACAGTGTGATTTTTATGTACAGTGGAGACTATCTGGAAGCAGAATTAATCCCACCAATACGGGCGTaGTCCAAACAGAATCCACTT | + |
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Preference number: 5 (lower is better) Translates to: AHSVIFMYSGDYLEAELIPPIRA*SKQNPL Trigger: AAGTGGATTCTGTTTGGACAACGCCCGTATTGGTGG...GATTAATTCTGCTTCCAGATAGTCTCCACTGTACATAAAAATCACACTGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | ACAATGCAGGCGAAGCGGAATGGGAGCAACTTGCTGAGTTCTCCCTaGCAGCTCTTCCGGTACATGCTGGAGTTGAGGGCCAGCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TMQAKRNGSNLLSSP*QLFRYMLELRASPN Trigger: GTTGGGGCTGGCCCTCAACTCCAGCATGTACCGGAAGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCGCTTCGCCTGCATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | GCGAAGCGGAATGGGAGCAACTTGCTGAGTTCTCCCTaGCAGCTCTTCCGGTACATGCTGGAGTTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AKRNGSNLLSSP*QLFRYMLELRA Trigger: GGCCCTCAACTCCAGCATGTACCGGAAGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCGCTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | GTGTCCAGGACCCACCAATACGGGCGTTGTCCAAACAGAATCCACTaGAAGACGAGGTTGAACCAGTCTCCGACCACTGCCACCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VSRTHQYGRCPNRIH*KTRLNQSPTTATQR Trigger: CCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAACCTCGTCTTCAAGTGGATTCTGTTTGGACAACGCCCGTATTGGTGGGTCCTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS TCA 72 bp | CCACAATGCAGGCGAAGCGGAATGGGAGCAACTTGCTaGGTTCTCCCTTGCAGCTCTTCCGGTACATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PQCRRSGMGATC*VLPCSSSGTCW Trigger: CCAGCATGTACCGGAAGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCGCTTCGCCTGCATTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | AGGACCAAGGAAGCCACAATGCAGGCGAAGCGGAATGGGAGCAACTaGCTGAGTTCTCCCTTGCAGCTCTTCCGGTACATGCTGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RTKEATMQAKRNGSN*LSSPLQLFRYMLEL Trigger: CAACTCCAGCATGTACCGGAAGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCGCTTCGCCTGCATTGTGGCTTCCTTGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS TCA 72 bp | TCCGGAGGCTGGCATTGTAGATGCCCCGGATGTGGCTaGAAGTTTCAGCCACAGCAATGCCTGACAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: SGGWHCRCPGCG*KFQPQQCLTRL Trigger: GAGTCTTGTCAGGCATTGCTGTGGCTGAAACTTTCAGCCACATCCGGGGCATCTACAATGCCAGCCTCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | GGGCGTTGTCCAAACAGAATCCACTTGAAGACGAGGTaGAACCAGTCTCCGACCACTGCCACCCAGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GRCPNRIHLKTR*NQSPTTATQRR Trigger: TCTCCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAACCTCGTCTTCAAGTGGATTCTGTTTGGACAACGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | GAAGCCACAATGCAGGCGAAGCGGAATGGGAGCAACTaGCTGAGTTCTCCCTTGCAGCTCTTCCGGTACATG | + |
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Preference number: 6 (lower is better) Translates to: EATMQAKRNGSN*LSSPLQLFRYM Trigger: CATGTACCGGAAGAGCTGCAAGGGAGAACTCAGCAAGTTGCTCCCATTCCGCTTCGCCTGCATTGTGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS GCA 72 bp | CCACTTGAAGACGAGGTTGAACCAGTCTCCGACCACTaGCACCCAGAGGAGATTGATGCCCACAGTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PLEDEVEPVSDH*HPEEIDAHSLF Trigger: AAAGAGACTGTGGGCATCAATCTCCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAACCTCGTCTTCAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | ACCCACCAATACGGGCGTTGTCCAAACAGAATCCACTaGAAGACGAGGTTGAACCAGTCTCCGACCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: THQYGRCPNRIH*KTRLNQSPTTA Trigger: GGCAGTGGTCGGAGACTGGTTCAACCTCGTCTTCAAGTGGATTCTGTTTGGACAACGCCCGTATTGGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 72 bp | GCTGGCAAAGGGTGTAGTGTCAAGGTGGACCCATTCTaGCCGCTCACACCATCTCTTAGCTTTCTCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGKGCSVKVDPF*PLTPSLSFLQS Trigger: ACTTTGGAGAAAGCTAAGAGATGGTGTGAGCGGCCAGAATGGGTCCACCTTGACACTACACCCTTTGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | AAGACGAGGTTGAACCAGTCTCCGACCACTGCCACCCAGAGGAGATaGATGCCCACAGTCTCTTTAAGATGGAACCAGATGGGAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KTRLNQSPTTATQRR*MPTVSLRWNQMGKR Trigger: CCTCTTTCCCATCTGGTTCCATCTTAAAGAGACTGTGGGCATCAATCTCCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAACCTCGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 72 bp | TTTTTGAAGAGGCTGGCAAAGGGTGTAGTGTCAAGGTaGACCCATTCTGGCCGCTCACACCATCTCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: FLKRLAKGVVSR*THSGRSHHLLA Trigger: AGCTAAGAGATGGTGTGAGCGGCCAGAATGGGTCCACCTTGACACTACACCCTTTGCCAGCCTCTTCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | TTGAACCAGTCTCCGACCACTGCCACCCAGAGGAGATaGATGCCCACAGTCTCTTTAAGATGGAACCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LNQSPTTATQRR*MPTVSLRWNQM Trigger: CATCTGGTTCCATCTTAAAGAGACTGTGGGCATCAATCTCCTCTGGGTGGCAGTGGTCGGAGACTGGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | GTAGTAGTCGGTGTCCAGGACCCACCAATACGGGCGTaGTCCAAACAGAATCCACTTGAAGACGAGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VVVGVQDPPIRA*SKQNPLEDEVE Trigger: TTCAACCTCGTCTTCAAGTGGATTCTGTTTGGACAACGCCCGTATTGGTGGGTCCTGGACACCGACTACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | CAGGTCAGCAATCACAGACACAAGGATGAACCAGTCCTGGGAGTCTaGGTAATTCACTTGGAGATAGCGAGTCGACTGGATCCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QVSNHRHKDEPVLGV*VIHLEIASRLDPKV Trigger: GACTTTGGGATCCAGTCGACTCGCTATCTCCAAGTGAATTACCAAGACTCCCAGGACTGGTTCATCCTTGTGTCTGTGATTGCTGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS TCA 72 bp | AGGCGTTCCTCAGGTCAGCAATCACAGACACAAGGATaGACCAGTCCTGGGAGTCTTGGTAATTCACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRSSGQQSQTQG*TSPGSLGNSLG Trigger: TCCAAGTGAATTACCAAGACTCCCAGGACTGGTTCATCCTTGTGTCTGTGATTGCTGACCTGAGGAACGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 72 bp | GAAAGACAAGATGTAGAAGATCAACTCAACCTGGGATaGGGGCTTCAGAGAGTCAAAGAGATGCAGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ERQDVEDQLNLG*GLQRVKEMQED Trigger: GTCCTCCTGCATCTCTTTGACTCTCTGAAGCCCCCATCCCAGGTTGAGTTGATCTTCTACATCTTGTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | AAGGATGAACCAGTCCTGGGAGTCTTGGTAATTCACTaGGAGATAGCGAGTCGACTGGATCCCAAAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: KDEPVLGVLVIH*EIASRLDPKVM Trigger: CATGACTTTGGGATCCAGTCGACTCGCTATCTCCAAGTGAATTACCAAGACTCCCAGGACTGGTTCATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 90 bp | CACAGACACAAGGATGAACCAGTCCTGGGAGTCTTGGTAATTCACTaGGAGATAGCGAGTCGACTGGATCCCAAAGTCATGGAGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: HRHKDEPVLGVLVIH*EIASRLDPKVMENV Trigger: AACATTCTCCATGACTTTGGGATCCAGTCGACTCGCTATCTCCAAGTGAATTACCAAGACTCCCAGGACTGGTTCATCCTTGTGTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CAA 72 bp | AATCACAGACACAAGGATGAACCAGTCCTGGGAGTCTaGGTAATTCACTTGGAGATAGCGAGTCGACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: NHRHKDEPVLGV*VIHLEIASRLD Trigger: ATCCAGTCGACTCGCTATCTCCAAGTGAATTACCAAGACTCCCAGGACTGGTTCATCCTTGTGTCTGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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| CDS CCA 72 bp | CCACAAGATGACGTTCAAACACCGGAATCCATACGTTaGCTTTTTCTTTCCTCGAAAGATAGCAAGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PQDDVQTPESIR*LFLSSKDSKSR Trigger: TCTACTCTTGCTATCTTTCGAGGAAAGAAAAAGCCAACGTATGGATTCCGGTGTTTGAACGTCATCTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019469.3 |
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