Pregenerated sensors for G3BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018583Ensembl transcript IDs: ENSMUST00000018727.4
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTGCTGCTCGCTaGTGGGAAGCAGGGCTGAAGCAACTCCCTAACCAGTCACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GLCPSKAHSHPSAAR*WEAGLKQLPNQSQA Trigger: TGCTTGTGACTGGTTAGGGAGTTGCTTCAGCCCTGCTTCCCAGCAGCGAGCAGCACTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CCA 90 bp | CTGTGCCCTTCCAAAGCACACTCCCACCCCAGTGCTGCTCGCTGCTaGGAAGCAGGGCTGAAGCAACTCCCTAACCAGTCACAAGCAATA | + |
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Preference number: 1 (lower is better) Translates to: LCPSKAHSHPSAARC*EAGLKQLPNQSQAI Trigger: TATTGCTTGTGACTGGTTAGGGAGTTGCTTCAGCCCTGCTTCCCAGCAGCGAGCAGCACTGGGGTGGGAGTGTGCTTTGGAAGGGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | AGTCCGATACTCAACCAAATTTCTCTTCTGGCCCAGCAGGAACCCTaGCAGACAGCAGAGCAGAGCGTGGCGCACAGAGCCACTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SPILNQISLLAQQEP*QTAEQSVAHRATEV Trigger: GACCTCAGTGGCTCTGTGCGCCACGCTCTGCTCTGCTGTCTGTCAGGGTTCCTGCTGGGCCAGAAGAGAAATTTGGTTGAGTATCGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CCA 90 bp | AAGAGGTGTTGGTGCATGCCTTTAATCCCACCAGGCAGAGACAGGTaGGCCTCTGAGAGTGAGGCCAGCCTTGTCTACAGAGCAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: KRCWCMPLIPPGRDR*ASESEASLVYRASS Trigger: GGAACTTGCTCTGTAGACAAGGCTGGCCTCACTCTCAGAGGCCCACCTGTCTCTGCCTGGTGGGATTAAAGGCATGCACCAACACCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | AGGGAGATGGCTGAGGCTAAAGCACTACGGGCAAGTATGAAGACCTaGCTAATCGCCAGAAGCCACAGGAAAGCCAGACATGGTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: REMAEAKALRASMKT*LIARSHRKARHGGT Trigger: TGTGCCACCATGTCTGGCTTTCCTGTGGCTTCTGGCGATTAGTCAGGTCTTCATACTTGCCCGTAGTGCTTTAGCCTCAGCCATCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | GCACACACACACACACACACAGAGCTGTACTGCTACACATTTATTTaGGGTAGAAGAGAATGGGCCTTTCATATCCCAACCCACCCACGG | + |
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Preference number: 1 (lower is better) Translates to: AHTHTHTELYCYTFI*GRREWAFHIPTHPR Trigger: CCGTGGGTGGGTTGGGATATGAAAGGCCCATTCTCTTCTACCTCAAATAAATGTGTAGCAGTACAGCTCTGTGTGTGTGTGTGTGTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CCA 90 bp | CATAGAAGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTTGTaGCTTATGGGCCCGTTTCAAACAGTGGAATATAAGGCCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: HRRLTWRLTGAHRSL*LMGPFQTVEYKAWL Trigger: GAGCCAGGCCTTATATTCCACTGTTTGAAACGGGCCCATAAGCCACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | CTGGTTGTCTACAGACTAATAGGGACTTGTCCACAGAGGCTCGTGTaGACAAAACCTTCACCCATGTCACACACAGCACTCAACACACAA | + |
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Preference number: 1 (lower is better) Translates to: LVVYRLIGTCPQRLV*TKPSPMSHTALNTQ Trigger: TTGTGTGTTGAGTGCTGTGTGTGACATGGGTGAAGGTTTTGTTCACACGAGCCTCTGTGGACAAGTCCCTATTAGTCTGTAGACAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | CTGGATGCAGGGAGGGAGGAAACAGACCACTCTCTTCTAGCATGGTaGAGCTTGAATATTGAGCTTGTGAGAAATCAGTTGTTCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LDAGREETDHSLLAW*SLNIELVRNQLFCE Trigger: CTCACAGAACAACTGATTTCTCACAAGCTCAATATTCAAGCTTCACCATGCTAGAAGAGAGTGGTCTGTTTCCTCCCTCCCTGCATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | CAGATGCTGCCAATATTCAGATCTGTGAGGTACCGAGACCAAACCTaGCAACCTCACACCGTTTTCATCCCAACTACTCTTTCTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: QMLPIFRSVRYRDQT*QPHTVFIPTTLSNN Trigger: GTTGTTAGAAAGAGTAGTTGGGATGAAAACGGTGTGAGGTTGTCAGGTTTGGTCTCGGTACCTCACAGATCTGAATATTGGCAGCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR TCA 90 bp | GCCTTAAATACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGTaGGTTAAAAAGAGGTTAAGCTACGCAGCAAGTTCCAGAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: ALNTSIWQAEEGKPL*VKKRLSYAASSRTV Trigger: AACTGTTCTGGAACTTGCTGCGTAGCTTAACCTCTTTTTAACTCACAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGTATTTAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR GCA 90 bp | AGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCATTGCCATaGTCCCATGACACCCCCTCACCTTGCACTGCAAATATTAATCAC | + |
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Preference number: 1 (lower is better) Translates to: RSLLPLFSRECGSLP*SHDTPSPCTANINH Trigger: GTGATTAATATTTGCAGTGCAAGGTGAGGGGGTGTCATGGGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR GCA 90 bp | TTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCATTaGCATGCTCCCATGACACCCCCTCACCTTGCACTGCAAATATTA | + |
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Preference number: 1 (lower is better) Translates to: FSDHCYPCSQENVGH*HAPMTPPHLALQIL Trigger: TAATATTTGCAGTGCAAGGTGAGGGGGTGTCATGGGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CCA 90 bp | AGTGTGAGTCAAATGAAAAGGAACAGTGAGTTCGTAATACATACATaGCACATACATAGCCTGGCAACAGGGCATGTTTCCACCCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SVSQMKRNSEFVIHT*HIHSLATGHVSTQN Trigger: GTTTTGGGTGGAAACATGCCCTGTTGCCAGGCTATGTATGTGCCATGTATGTATTACGAACTCACTGTTCCTTTTCATTTGACTCACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAAGGAATTCACCATTCTaGAGGAGCCGGGGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPRNSPF*RSRGCV Trigger: CACACAGCCCCGGCTCCTGCAGAATGGTGAATTCCT...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCACCACAGAGGCTCGTGTaGACAAAACCTTCACCCATG | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPPQRLV*TKPSPM Trigger: CATGGGTGAAGGTTTTGTTCACACGAGCCTCTGTGG...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAATGGTGGCACATGCCTaGAATCCCTGTGCCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPMVAHA*NPCALT Trigger: TGTAAGGGCACAGGGATTTCAGGCATGTGCCACCAT...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGCTCCTTGGCTCAATACCGTAGGTATTGCCCGAGGCCCTGCCTGCTCCCATAGAAGACTCACTTaGAGACTCACAGGAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KWAPWLNTVGIARGPACSHRRLT*RLTGAH Trigger: ATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATG...GGAGCAGGCAGGGCCTCGGGCAATACCTACGGTATTGAGCCAAGGAGCCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | GAACCTGCCACAGGGGGCTTACAGTCTATGGGACTGGTGAGAGAAAACAGTGTGATTCCAACTCCAGGCTaGACCATGAGAGAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: EPATGGLQSMGLVRENSVIPTPG*TMREAE Trigger: CTCTGCCTCTCTCATGGTTCAGCCTGGAGTTGGAAT...CACACTGTTTTCTCTCACCAGTCCCATAGACTGTAAGCCCCCTGTGGCAGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGCTCCTTGGCTCAATACCGTAGGTATTGCCCGAGGCCCTGCCTGCTCCCTTTTGCCTCCTGAGTaGTGGGATTATTGTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: KWAPWLNTVGIARGPACSLLPPE*WDYCHE Trigger: CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAG...GGAGCAGGCAGGGCCTCGGGCAATACCTACGGTATTGAGCCAAGGAGCCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGCCCAGTGCTGCTCGCTaGTGGGAAGCAGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLQSVISQFLKKSQPSPVPSAAR*WEAGLK Trigger: CTTCAGCCCTGCTTCCCAGCAGCGAGCAGCACTGGG...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGACTCGTCATTCCACAAGTGTGAGTCAAATGAAAAGGAACAGTGAGTTCACACTCCCACCCCAGTaGTGCTCGCTGCTGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: MGTRHSTSVSQMKRNSEFTLPPQ*CSLLGS Trigger: GCTTCCCAGCAGCGAGCAGCACTGGGGTGGGAGTGT...GAACTCACTGTTCCTTTTCATTTGACTCACACTTGTGGAATGACGAGTCCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGAGGGTCAGGCACTTCTGGAAAAAGCCTGTGCTTTCTTGTGTGGCCACGCAGCAGTGCAAAATGTaGTGCCAAGTTCAGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RLRVRHFWKKPVLSCVATQQCKM*CQVQAC Trigger: ACAGGCCTGAACTTGGCAGCACATTTTGCACTGCTG...CGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGAAGTGCCTGACCCTCAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGAGGGTCAGGCACTTCTGGAAAAAGCCTGTGCTTTCTTGTGTGGCCACGAGAGAGCTAGGGAGATaGCTGAGGCTAAAGCACTAC | + |
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Preference number: 2 (lower is better) Translates to: RLRVRHFWKKPVLSCVATRELGR*LRLKHY Trigger: GTAGTGCTTTAGCCTCAGCCATCTCCCTAGCTCTCT...CGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGAAGTGCCTGACCCTCAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCATTGCCTCCTGAGTGCTaGGATTATTGTCATGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPLPPEC*DYCHEP Trigger: TGGCTCATGACAATAATCCCAGCACTCAGGAGGCAA...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTTCTCAAGAGAATGTaGGTCATTGCCATGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPVLKRM*VIAMLP Trigger: TGGGAGCATGGCAATGACCCACATTCTCTTGAGAAC...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGCCGGAAAACTGGGAATaGAGGACTAAGGGGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HRTTHKLLPPECWDYCHEPENWE*RTKGSG Trigger: CCCTGACCCCTTAGTCCTTCATTCCCAGTTTTCCGG...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGACACCCCCTCACCTTaGACTGCAAATATTAATCAC | + |
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Preference number: 2 (lower is better) Translates to: KMCCQVQACALPKHTPTPDTPSP*TANINH Trigger: GTGATTAATATTTGCAGTGCAAGGTGAGGGGGTGTC...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 90 bp | GGCCATAGAAGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTaGTGGCTTATGGGCCCGTTTCAAACAGTGGAATATAAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GHRRLTWRLTGAHRS*WLMGPFQTVEYKAW Trigger: CCAGGCCTTATATTCCACTGTTTGAAACGGGCCCATAAGCCACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGCTCCAGGCTGAACCATaGGAGAGGCAGAGTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GLQSVISQFLKKSQPSPVLQAEP*ERQSPL Trigger: TAGAGGACTCTGCCTCTCTCATGGTTCAGCCTGGAG...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | TTCACTTACAGTGCTCAACGGGGACAGGTCTTGACAAAACCCAGCATGAGAGAGCTACATCCCTATACATaGACACCCGAGCATGCACGA | + |
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Preference number: 2 (lower is better) Translates to: FTYSAQRGQVLTKPSMRELHPYT*TPEHAR Trigger: TCGTGCATGCTCGGGTGTGCATGTATAGGGATGTAG...CTCTCTCATGCTGGGTTTTGTCAAGACCTGTCCCCGTTGAGCACTGTAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGGGGCTGTGTGCTGTGTaGAGATCAGAGCCAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: HRTTHKLLPPECWDYCHEGLCAV*RSEPSN Trigger: ATTGCTTGGCTCTGATCTCCACACAGCACACAGCCC...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGTCACACGGAGGCAGATaGGTGGGTTTCTGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLQSVISQFLKKSQPSPVSHGGR*VGFWSS Trigger: TGAGCTCCAGAAACCCACCCATCTGCCTCCGTGTGA...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATAGAAGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTTGTGGCTTGCTCCCAAATTGTCCTaGCTTTCACAAGCATGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GHRRLTWRLTGAHRSLWLAPKLS*LSQACL Trigger: CAAGCATGCTTGTGAAAGTCAGGACAATTTGGGAGC...AAGCCACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGCCCAAAGCAGTCATGTaGCTTGGCTACCTCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: HRTTHKLLPPECWDYCHEPKAVM*LGYLSS Trigger: TGAACTGAGGTAGCCAAGTCACATGACTGCTTTGGG...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGGGTGCTACTATGTTCTaGATGCCACCTGGGTCTTCG | + |
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Preference number: 2 (lower is better) Translates to: GLQSVISQFLKKSQPSPVGATMF*MPPGSS Trigger: CGAAGACCCAGGTGGCATTCAGAACATAGTAGCACC...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTTTAGCAGTCTACATTaGCAGATGAAGTTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KCAAKFRPVPFQSTLPPQFSSLH*QMKFSS Trigger: GGAAGAAAACTTCATCTGGCAATGTAGACTGCTAAA...CTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCCACAGGGGGCTTACAGTCTATGGGACTGGTGAGAGAAAACAGTGTGCTCAACACACAACACTaGGAAGTGAGTTTTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EPATGGLQSMGLVRENSVLNTQH*EVSFSS Trigger: ACTGCTAAAACTCACTTCCCAGTGTTGTGTGTTGAG...CACACTGTTTTCTCTCACCAGTCCCATAGACTGTAAGCCCCCTGTGGCAGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 90 bp | ACACACACACACACACTCTCTGGTTGTCTACAGACTAATAGGGACTaGTCCACAGAGGCTCGTGTGAACAAAACCTTCACCCATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: THTHTLSGCLQTNRD*STEARVNKTFTHVT Trigger: TGTGACATGGGTGAAGGTTTTGTTCACACGAGCCTCTGTGGACAAGTCCCTATTAGTCTGTAGACAACCAGAGAGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGAGGGTCAGGCACTTCTGGAAAAAGCCTGTGCTTTCTTGTGTGGCCACGCCATTGGGTACCACTTaGACTTTTCTCAGAAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: RLRVRHFWKKPVLSCVATPLGTT*TFLRSN Trigger: ATTACTTCTGAGAAAAGTCCAAGTGGTACCCAATGG...CGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGAAGTGCCTGACCCTCAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCCACAGGGGGCTTACAGTCTATGGGACTGGTGAGAGAAAACAGTGTGTTCTCAGAAGTAATGTaGGGTTTTGACAATCACACT | + |
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Preference number: 2 (lower is better) Translates to: EPATGGLQSMGLVRENSVFSEVM*GFDNHT Trigger: AGTGTGATTGTCAAAACCCCACATTACTTCTGAGAA...CACACTGTTTTCTCTCACCAGTCCCATAGACTGTAAGCCCCCTGTGGCAGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 90 bp | GAGGTAGAAGAGAATGGGCCTTTCATATCCCAACCCACCCACGGGTaGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EVEENGPFISQPTHG*LYFSDHCYPCSQEN Trigger: ATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAACCCGTGGGTGGGTTGGGATATGAAAGGCCCATTCTCTTCTACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGACTCGTCATTCCACAAGTGTGAGTCAAATGAAAAGGAACAGTGAGTTCTCTGGAAAAAGCCTGTaGTTTCTTGTGTGGCCACGA | + |
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Preference number: 2 (lower is better) Translates to: MGTRHSTSVSQMKRNSEFSGKSL*FLVWPR Trigger: TCGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGA...GAACTCACTGTTCCTTTTCATTTGACTCACACTTGTGGAATGACGAGTCCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGACTCGTCATTCCACAAGTGTGAGTCAAATGAAAAGGAACAGTGAGTTCAATCGAGGCTGGTTTTaGATTCAGTCCTCTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: MGTRHSTSVSQMKRNSEFNRGWF*IQSSHL Trigger: AAGGTGAGAGGACTGAATCCAAAACCAGCCTCGATT...GAACTCACTGTTCCTTTTCATTTGACTCACACTTGTGGAATGACGAGTCCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGAATCGCATCTTAATTTaGCATGAGAAGGTTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLQSVISQFLKKSQPSPVNRILI*HEKVEG Trigger: ACCCTCAACCTTCTCATGTCAAATTAAGATGCGATT...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR-3UTR GCA 90 bp | AGCACGTTAGCCAAGTCCGATACTCAACCAAATTTCTCTTCTGGCCCAGCAGGAAAAAGAACAAAGGTCTaGAACCACCTTTTATTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: STLAKSDTQPNFSSGPAGKRTKV*NHLLFS Trigger: ACTGAATAAAAGGTGGTTGCAGACCTTTGTTCTTTT...TCCTGCTGGGCCAGAAGAGAAATTTGGTTGAGTATCGGACTTGGCTAACGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCAACCAGAAAGGAGTCGTaGCTTGATTTTTCCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VALFLRSLLPLFSRECGSTRKES*LDFSCF Trigger: GAAGCAGGAAAAATCAAGTCACGACTCCTTTCTGGT...TGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCACGAGACACCAAACGCTaGTTAAAGGAATTCACCATT | + |
|
Preference number: 2 (lower is better) Translates to: VALFLRSLLPLFSRECGSRDTKR*LKEFTI Trigger: AATGGTGAATTCCTTTAACCAGCGTTTGGTGTCTCG...TGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAAATCAAAGTCTTGGTTAAGATTTACTTACTTCCAACAGGTCTGACAACACACAACACTGGGAAGTaGGTTTTAGCAGTCTACATT | + |
|
Preference number: 2 (lower is better) Translates to: QQIKVLVKIYLLPTGLTTHNTGK*VLAVYI Trigger: AATGTAGACTGCTAAAACTCACTTCCCAGTGTTGTG...TGTTGTCAGACCTGTTGGAAGTAAGTAAATCTTAACCAAGACTTTGATTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAAATCAAAGTCTTGGTTAAGATTTACTTACTTCCAACAGGTCTGACAACAAAAGGAGTCGTGACTTaGTTTTTCCTGCTTCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QQIKVLVKIYLLPTGLTTKGVVT*FFLLPK Trigger: TTTTGGAAGCAGGAAAAATCAAGTCACGACTCCTTT...TGTTGTCAGACCTGTTGGAAGTAAGTAAATCTTAACCAAGACTTTGATTTGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | CCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTGCTaGTCGCTGCTGGGAAGCAGGGCTGAAGCAACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PVPFQSTLPPQC*SLLGSRAEATP Trigger: GGGAGTTGCTTCAGCCCTGCTTCCCAGCAGCGAGCAGCACTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | ACAGACAGCAGAGCAGAGCGTGGCGCACAGAGCCACTaGGGTCACCGGCCTCACAGAAGCACCTTCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDSRAERGAQSH*GHRPHRSTFLS Trigger: GCTGAGGAAGGTGCTTCTGTGAGGCCGGTGACCTCAGTGGCTCTGTGCGCCACGCTCTGCTCTGCTGTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | AGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTaGTGCTCGCTGCTGGGAAGCAGGGCTGAAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: RPVPFQSTLPPQ*CSLLGSRAEAT Trigger: AGTTGCTTCAGCCCTGCTTCCCAGCAGCGAGCAGCACTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | TCTCCAGTCCCCACTGCTCCAAGGCGGCAGCTGAGCTaGCAAAGCACAGGAATGCCACCTCCCAGTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPVPTAPRRQLS*QSTGMPPPSDS Trigger: GCTGTCACTGGGAGGTGGCATTCCTGTGCTTTGCCAGCTCAGCTGCCGCCTTGGAGCAGTGGGGACTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | TCAACTCTCCAGTCCCCACTGCTCCAAGGCGGCAGCTaGGCTGGCAAAGCACAGGAATGCCACCTCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: STLQSPLLQGGS*AGKAQECHLPV Trigger: CACTGGGAGGTGGCATTCCTGTGCTTTGCCAGCTCAGCTGCCGCCTTGGAGCAGTGGGGACTGGAGAGTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | CTCAACCAAATTTCTCTTCTGGCCCAGCAGGAACCCTaGCAGACAGCAGAGCAGAGCGTGGCGCACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LNQISLLAQQEP*QTAEQSVAHRA Trigger: GGCTCTGTGCGCCACGCTCTGCTCTGCTGTCTGTCAGGGTTCCTGCTGGGCCAGAAGAGAAATTTGGTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | GCCAGAAGCCACAGGAAAGCCAGACATGGTGGCACATaGCTGAAATCCCTGTGCCCTTACAGCGAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARSHRKARHGGT*LKSLCPYSERP Trigger: TGGCCTCTCGCTGTAAGGGCACAGGGATTTCAGGCATGTGCCACCATGTCTGGCTTTCCTGTGGCTTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | CCAGCAGTGCAAAATGTGCTGCCAAGTTCAGGCCTGTaGCCTTCCAAAGCACACTCCCACCCCAGTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PAVQNVLPSSGL*PSKAHSHPSAA Trigger: AGCAGCACTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTTGCACTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | CAGGAAATGGGCTCCTTGGCTCAATACCGTAGGTATTaGCCGAGGCCCTGCCTGCTCCTGGAAGCCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: QEMGSLAQYRRY*PRPCLLLEALI Trigger: AATCAGGGCTTCCAGGAGCAGGCAGGGCCTCGGGCAATACCTACGGTATTGAGCCAAGGAGCCCATTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | GGACAGGTCTTGACAAAACCCAGCATGAGAGAGAGGTaGGGCACACAGGCACATGTGCAAGGAGGAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQVLTKPSMRER*GTQAHVQGGEG Trigger: GCCTTCTCCTCCTTGCACATGTGCCTGTGTGCCCCACCTCTCTCTCATGCTGGGTTTTGTCAAGACCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAACCACACACAAGCTTTaGCCTCCTGAGTGCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KMCCQVQACALPKHTPTPTTHKL*PPECWD Trigger: ATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGT...TGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | TCACAACCTAGCCCGGTGGTAATTCCAACTCCAGGCTaGACCATGAGAGAGGCAGAGTCCTCTAGGAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: SQPSPVVIPTPG*TMREAESSRKT Trigger: GGTCTTCCTAGAGGACTCTGCCTCTCTCATGGTTCAGCCTGGAGTTGGAATTACCACCGGGCTAGGTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | AACCTGCCACAGGGGGCTTACAGTCTATGGGACTGGTaGGAGAAAACAGTGTGGGAGATACAAGGCCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NLPQGAYSLWDW*EKTVWEIQGQS Trigger: ACTCTGGCCTTGTATCTCCCACACTGTTTTCTCTCACCAGTCCCATAGACTGTAAGCCCCCTGTGGCAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | AACCAGTCACAAGCAATACTGCTACATCCCTATACATaGACACCCGAGCATGCACGAGCGCGAGAGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: NQSQAILLHPYT*TPEHARAREHT Trigger: TGTGTGCTCTCGCGCTCGTGCATGCTCGGGTGTGCATGTATAGGGATGTAGCAGTATTGCTTGTGACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGAGGGTCAGGCACTTCTGGAAAAAGCCTGTGCTTTCTTGTGTGGCCACGCAACCCACCCACGGGTaGCTCTATTTCTCAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: RLRVRHFWKKPVLSCVATQPTHG*LYFSDH Trigger: ATGATCTGAGAAATAGAGCAACCCGTGGGTGGGTTG...CGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGAAGTGCCTGACCCTCAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | GCTGAGGCTAAAGCACTACGGGCAAGTATGAAGACCTaGCTAATCGCCAGAAGCCACAGGAAAGCCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: AEAKALRASMKT*LIARSHRKARH Trigger: ATGTCTGGCTTTCCTGTGGCTTCTGGCGATTAGTCAGGTCTTCATACTTGCCCGTAGTGCTTTAGCCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | CATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCATTaGCATGCTCCCATGACACCCCCTCACCTTGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: HCYPCSQENVGH*HAPMTPPHLAL Trigger: CAGTGCAAGGTGAGGGGGTGTCATGGGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAACAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | CAAGGGGCCACAGGCATCCTCAGGCACCTACACACATaGCCAACATTCACCCAAACACGTACACATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QGATGILRHLHT*PTFTQTRTHKT Trigger: TGTTTTATGTGTACGTGTTTGGGTGAATGTTGGCCATGTGTGTAGGTGCCTGAGGATGCCTGTGGCCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCACACGCCTTAAATACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGCTTTTCTTTAAACAATaGCCAGGACCGACCGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: VAHALNTSIWQAEEGKPLLFFKQ*PGPTGI Trigger: GATTCCGGTCGGTCCTGGCAATTGTTTAAAGAAAAG...CAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGTATTTAAGGCGTGTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGCTCCTTGGCTCAATACCGTAGGTATTGCCCGAGGCCCTGCCTGCTCCGTTCCCCCACATACTTaGAATCTGAAAACAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: KWAPWLNTVGIARGPACSVPPHT*NLKTNL Trigger: TAGATTTGTTTTCAGATTCAAAGTATGTGGGGGAAC...GGAGCAGGCAGGGCCTCGGGCAATACCTACGGTATTGAGCCAAGGAGCCCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | TTACCCTTGTTCTCAAGAGAATGTGGGTCATTGCCATaGTCCCATGACACCCCCTCACCTTGCACTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPLFSRECGSLP*SHDTPSPCTAN Trigger: ATTTGCAGTGCAAGGTGAGGGGGTGTCATGGGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | TACAGACTAATAGGGACTTGTCCACAGAGGCTCGTGTaGACAAAACCTTCACCCATGTCACACACAGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: YRLIGTCPQRLV*TKPSPMSHTAL Trigger: GAGTGCTGTGTGTGACATGGGTGAAGGTTTTGTTCACACGAGCCTCTGTGGACAAGTCCCTATTAGTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | ACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGTaGGTTAAAAAGAGGTTAAGCTACGCAGCAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TSIWQAEEGKPL*VKKRLSYAASS Trigger: GGAACTTGCTGCGTAGCTTAACCTCTTTTTAACTCACAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | TACATGCTGCACACGTCTGTCTGCATTATCGATGCCTaGAACAAGTGGTTTAAACGGACCCCAAAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: YMLHTSVCIIDA*NKWFKRTPKQS Trigger: TGACTGCTTTGGGGTCCGTTTAAACCACTTGTTTCAGGCATCGATAATGCAGACAGACGTGTGCAGCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | AGAATGGGCCTTTCATATCCCAACCCACCCACGGGTTaGTCTATTTCTCAGATCATTGTTACCCTTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RMGLSYPNPPTG*SISQIIVTLVL Trigger: GAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAACCCGTGGGTGGGTTGGGATATGAAAGGCCCATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | CTTATGGGCCCGTTTCAAACAGTGGAATATAAGGCCTaGCTCCCAAATTGTCCTGACTTTCACAAGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LMGPFQTVEYKA*LPNCPDFHKHA Trigger: AGCATGCTTGTGAAAGTCAGGACAATTTGGGAGCCAGGCCTTATATTCCACTGTTTGAAACGGGCCCATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | CTCACTTGGAGACTCACAGGAGCCCATAGAAGTTTGTaGCTTATGGGCCCGTTTCAAACAGTGGAATATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTWRLTGAHRSL*LMGPFQTVEYK Trigger: CTTATATTCCACTGTTTGAAACGGGCCCATAAGCCACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | ATGGACGGCTATCCCCAGTCACTGACTCAACCATCATaGGGACTTCAAAGTGTCATTTCTCAGTTCCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MDGYPQSLTQPS*GLQSVISQFLK Trigger: CTTAAGGAACTGAGAAATGACACTTTGAAGTCCCCATGATGGTTGAGTCAGTGACTGGGGATAGCCGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGGAAAGGAGTCGTGACTaGATTTTTCCTGCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HRTTHKLLPPECWDYCHEERSRD*IFPASK Trigger: TTTGGAAGCAGGAAAAATCAAGTCACGACTCCTTTC...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | CCAATATTCAGATCTGTGAGGTACCGAGACCAAACCTaGCAACCTCACACCGTTTTCATCCCAACTACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PIFRSVRYRDQT*QPHTVFIPTTL Trigger: AAGAGTAGTTGGGATGAAAACGGTGTGAGGTTGTCAGGTTTGGTCTCGGTACCTCACAGATCTGAATATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | GCTGAGCTGGCAAAGCACAGGAATGCCACCTCCCAGTaGCAGCAAATCAAAGTCTTGGTTAAGATTTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: AELAKHRNATSQ*QQIKVLVKIYL Trigger: TAAGTAAATCTTAACCAAGACTTTGATTTGCTGTCACTGGGAGGTGGCATTCCTGTGCTTTGCCAGCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | GGGAGGGAGGAAACAGACCACTCTCTTCTAGCATGGTaGAGCTTGAATATTGAGCTTGTGAGAAATCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GREETDHSLLAW*SLNIELVRNQL Trigger: CAACTGATTTCTCACAAGCTCAATATTCAAGCTTCACCATGCTAGAAGAGAGTGGTCTGTTTCCTCCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGCCAAGTCCGATACTCAACCAAATTTCTCTTCTGGCCCAGCAGGAACCCTATCAGATTTGGGGGTTaGTTTTCTTGTGGGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSQVRYSTKFLFWPSRNPIRFGG*FSCGNF Trigger: AAAATTCCCACAAGAAAACAAACCCCCAAATCTGAT...AGGGTTCCTGCTGGGCCAGAAGAGAAATTTGGTTGAGTATCGGACTTGGCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | CATTGGGTACCACTTGGACTTTTCTCAGAAGTAATGTaGGGTTTTGACAATCACACTATGCAACCTTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HWVPLGLFSEVM*GFDNHTMQPWW Trigger: CCACCAAGGTTGCATAGTGTGATTGTCAAAACCCCACATTACTTCTGAGAAAAGTCCAAGTGGTACCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | AAGTCTTGGTTAAGATTTACTTACTTCCAACAGGTCTaGCAACAGGGACTCCTGCCTAAGAGTATCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSWLRFTYFQQV*QQGLLPKSILL Trigger: CAGCAAGATACTCTTAGGCAGGAGTCCCTGTTGTCAGACCTGTTGGAAGTAAGTAAATCTTAACCAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR TCA 72 bp | CAGGAATACGACAGAGCTACAAACGGACAAACAAAATaGAAGGGGGTGAATCTGTTCACTTACAGTGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QEYDRATNGQTK*KGVNLFTYSAQ Trigger: TTGAGCACTGTAAGTGAACAGATTCACCCCCTTTCATTTTGTTTGTCCGTTTGTAGCTCTGTCGTATTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR GCA 72 bp | TCTTGTCACCATAAGCTTTACTACAGAAGTACATGCTaGACACGTCTGTCTGCATTATCGATGCCTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SCHHKLYYRSTC*TRLSALSMPET Trigger: TGTTTCAGGCATCGATAATGCAGACAGACGTGTGCAGCATGTACTTCTGTAGTAAAGCTTATGGTGACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CCA 72 bp | CAAATGAAAAGGAACAGTGAGTTCGTAATACATACATaGCACATACATAGCCTGGCAACAGGGCATGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QMKRNSEFVIHT*HIHSLATGHVS Trigger: GGAAACATGCCCTGTTGCCAGGCTATGTATGTGCCATGTATGTATTACGAACTCACTGTTCCTTTTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGGACTCGTCATTCCACAAGTGTGAGTCAAATGAAAAGGAACAGTGAGTTCCTATTTCTCAGATCATaGTTACCCTTGTTCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MGTRHSTSVSQMKRNSEFLFLRS*LPLFSR Trigger: TCTTGAGAACAAGGGTAACAATGATCTGAGAAATAG...GAACTCACTGTTCCTTTTCATTTGACTCACACTTGTGGAATGACGAGTCCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCAAAGTCTTGGTTAAGATTTACTTACTTCCAACAGGTCTGACAACAATAGAAGGCACAGTTTaGCTTGGTTTTTGTTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQIKVLVKIYLLPTGLTTIEGTV*LGFCYQ Trigger: CTGATAACAAAAACCAAGCAAAACTGTGCCTTCTAT...TGTTGTCAGACCTGTTGGAAGTAAGTAAATCTTAACCAAGACTTTGATTTGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCTCCTTGGCTCAATACCGTAGGTATTGCCCGAGGCCCTGCCTGCTCCGGACAAAGGTCTGCATaGACCTCCGCAGAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KWAPWLNTVGIARGPACSGQRSA*TSAEPG Trigger: ACCAGGCTCTGCGGAGGTTCATGCAGACCTTTGTCC...GGAGCAGGCAGGGCCTCGGGCAATACCTACGGTATTGAGCCAAGGAGCCCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| CDS-3UTR TCA 90 bp | AAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGGGTCGGGGTCCTCTCTaGGGAGGGATATTGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KCAAKFRPVPFQSTLPPQGRGPL*GGILIR Trigger: GCGAATCAATATCCCTCCTCAGAGAGGACCCCGACC...CTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| CDS-3UTR CCA 90 bp | GGGACCCAGCGCCAGGTGCCAAAAGGCAATTTTTCCACACCAGAAAGGAGTCGTAGTAGCCCCATCACTTaGACCACCACCCCGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQRQVPKGNFSTPERSRSSPIT*TTTPSF Trigger: GAATGACGGGGTGGTGGTCCAAGTGATGGGGCTACT...ACGACTCCTTTCTGGTGTGGAAAAATTGCCTTTTGGCACCTGGCGCTGGGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| CDS-3UTR GCA 90 bp | GTGGCACACGCCTTAAATACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGCCCGTAGACTGCATCTaGTGGCTTCCCGTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VAHALNTSIWQAEEGKPLPVDCI*WLPVGI Trigger: GATTCCAACGGGAAGCCAGCAGATGCAGTCTACGGG...CAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGTATTTAAGGCGTGTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| CDS-3UTR TCA 90 bp | CGAGAGGCCATAGAAGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTTGTGTGACGCTGGCACTTTaGCCACATGAGGTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REAIEDSLGDSQEPIEVCVTLAL*PHEVVS Trigger: GGACACCACCTCATGTGGTCAAAGTGCCAGCGTCAC...ACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATGGCCTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
||
| 3UTR CAA 72 bp | GAGGGTCAGGCACTTCTGGAAAAAGCCTGTGCTTTCTaGTGTGGCCACGAGTGCCTCTTAAGCTCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGQALLEKACAF*CGHECLLSSEV Trigger: AACCTCAGAGCTTAAGAGGCACTCGTGGCCACACAAGAAAGCACAGGCTTTTTCCAGAAGTGCCTGACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR GCA 90 bp | CGAGAGGCCATAGAAGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTTGTAGCAGCTTCTTCCAATaGAGCCTCAGGCTTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: REAIEDSLGDSQEPIEVCSSFFQ*SLRLVL Trigger: GAGGACAAGCCTGAGGCTGCATTGGAAGAAGCTGCT...ACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCTTCTATGGCCTCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | TTCACTTACAGTGCTCAACGGGGACAGGTCTTGACAAAACCCAGCATGAGAGAGTCTCTGAGGCCTTTGTaGTGGGATCTGAGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FTYSAQRGQVLTKPSMRESLRPL*WDLRVR Trigger: CCTGACTCTCAGATCCCACCACAAAGGCCTCAGAGA...CTCTCTCATGCTGGGTTTTGTCAAGACCTGTCCCCGTTGAGCACTGTAAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 72 bp | CAGACCAGGTTAGCCCACAGAACCACACACAAGCTTTaGCCTCCTGAGTGCTGGGATTATTGTCATGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QTRLAHRTTHKL*PPECWDYCHEP Trigger: TGGCTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTGGGCTAACCTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGAGGTTCCACATCTCCTaGTTCACCAGCCTCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: HRTTHKLLPPECWDYCHERFHIS*FTSLTD Trigger: ATCCGTGAGGCTGGTGAACCAGGAGATGTGGAACCT...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 72 bp | TCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCATaGCCATGCTCCCATGACACCCCCTCACCTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SLLPLFSRECGS*PCSHDTPSPCT Trigger: AGTGCAAGGTGAGGGGGTGTCATGGGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAACAATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | GGCCTTTCATATCCCAACCCACCCACGGGTTGCTCTATTTCTCAGATCATTGTTCTGAGGCCTTTGTGGTaGGATCTGAGAGTCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GLSYPNPPTGCSISQIIVLRPLW*DLRVRF Trigger: AAACCTGACTCTCAGATCCCACCACAAAGGCCTCAG...AACAATGATCTGAGAAATAGAGCAACCCGTGGGTGGGTTGGGATATGAAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR TCA 90 bp | TTCACTTACAGTGCTCAACGGGGACAGGTCTTGACAAAACCCAGCATGAGAGAGCCTCATCTTGGTACCTaGAGATGTCGTTGTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: FTYSAQRGQVLTKPSMREPHLGT*RCRCEH Trigger: ATGTTCACAACGACATCTTCAGGTACCAAGATGAGG...CTCTCTCATGCTGGGTTTTGTCAAGACCTGTCCCCGTTGAGCACTGTAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR GCA 90 bp | TTCACTTACAGTGCTCAACGGGGACAGGTCTTGACAAAACCCAGCATGAGAGAGCTTACTCGTCACAGATaGCCAAGAAAACGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: FTYSAQRGQVLTKPSMRELTRHR*PRKRPQ Trigger: TTGAGGACGTTTTCTTGGGCATCTGTGACGAGTAAG...CTCTCTCATGCTGGGTTTTGTCAAGACCTGTCCCCGTTGAGCACTGTAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGATCAGGCACCACCTCTaGTGTCTGCTGTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GLQSVISQFLKKSQPSPVIRHHL*CLLSFF Trigger: GAAGAAAGACAGCAGACACCAGAGGTGGTGCCTGAT...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR TCA 90 bp | CACAGAACCACACACAAGCTTTTGCCTCCTGAGTGCTGGGATTATTGTCATGAGCTTTGTGGTGGGATCTaGGAGTCAGGTTTAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: HRTTHKLLPPECWDYCHELCGGI*ESGLDS Trigger: AGAATCTAAACCTGACTCTCAGATCCCACCACAAAG...CTCATGACAATAATCCCAGCACTCAGGAGGCAAAAGCTTGTGTGTGGTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR GCA 90 bp | GTTGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCACTTCTGCCCGTAGACTaGATCTGCTGGCTTCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: VALFLRSLLPLFSRECGSLLPVD*ICWLPV Trigger: AACGGGAAGCCAGCAGATGCAGTCTACGGGCAGAAG...TGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 72 bp | AGACTCACTTGGAGACTCACAGGAGCCCATAGAAGTTaGTGGCTTATGGGCCCGTTTCAAACAGTGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: RLTWRLTGAHRS*WLMGPFQTVEY Trigger: ATATTCCACTGTTTGAAACGGGCCCATAAGCCACAAACTTCTATGGGCTCCTGTGAGTCTCCAAGTGAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 72 bp | CCACGGGTTGCTCTATTTCTCAGATCATTGTTACCCTaGTTCTCAAGAGAATGTGGGTCATTGCCATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRVALFLRSLLP*FSRECGSLPCS Trigger: GGAGCATGGCAATGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAACCCGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| 3UTR CAA 72 bp | GAGAATGGGCCTTTCATATCCCAACCCACCCACGGGTaGCTCTATTTCTCAGATCATTGTTACCCTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ENGPFISQPTHG*LYFSDHCYPCS Trigger: AGAACAAGGGTAACAATGATCTGAGAAATAGAGCAACCCGTGGGTGGGTTGGGATATGAAAGGCCCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | GGACTTCAAAGTGTCATTTCTCAGTTCCTTAAGAAGTCACAACCTAGCCCGGTGGAACATAGAATTTGTTaGCAACAGAGCCCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLQSVISQFLKKSQPSPVEHRIC*QQSPQE Trigger: CTCCTGAGGGCTCTGTTGCCAACAAATTCTATGTTC...CACCGGGCTAGGTTGTGACTTCTTAAGGAACTGAGAAATGACACTTTGAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR GCA 90 bp | GTTGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCAACCACCTCTGGTGTCTaGTGTCTTTCTTCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VALFLRSLLPLFSRECGSTTSGV*CLSSGS Trigger: AGAACCTGAAGAAAGACAGCAGACACCAGAGGTGGT...TGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CCA 90 bp | GTTGCTCTATTTCTCAGATCATTGTTACCCTTGTTCTCAAGAGAATGTGGGTCATGGCGGATCTTGGTGTaGCAGTTGGTGAAGTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VALFLRSLLPLFSRECGSWRILV*QLVKFC Trigger: ACAAAACTTCACCAACTGCCACACCAAGATCCGCCA...TGACCCACATTCTCTTGAGAACAAGGGTAACAATGATCTGAGAAATAGAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CAA 90 bp | AAATGTGCTGCCAAGTTCAGGCCTGTGCCCTTCCAAAGCACACTCCCACCCCAGTCTGCTGGCTTCCCGTaGGAATCCAAGCCCCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: KCAAKFRPVPFQSTLPPQSAGFP*ESKPPW Trigger: CCACGGGGGCTTGGATTCCAACGGGAAGCCAGCAGA...CTGGGGTGGGAGTGTGCTTTGGAAGGGCACAGGCCTGAACTTGGCAGCACATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS GCA 90 bp | CGGGGAAGTGCTCTTCTGCACATCGTCGGGAGCAGCTTCTTCCAATaGAGCCTCAGGCTTGTCCTCTTGAATGTCGGACACAGGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: RGSALLHIVGSSFFQ*SLRLVLLNVGHRFR Trigger: CCGGAACCTGTGTCCGACATTCAAGAGGACAAGCCTGAGGCTGCATTGGAAGAAGCTGCTCCCGACGATGTGCAGAAGAGCACTTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS TCA 90 bp | CACCAGCCTCACGGATTGGTCGGGGTCCTCTCTGAGGAGGGATATTaGTTCGCTGCTCTCGAACTCTCTGATCTCTCTGAGGCCTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: HQPHGLVGVLSEEGY*FAALELSDLSEAFV Trigger: CACAAAGGCCTCAGAGAGATCAGAGAGTTCGAGAGCAGCGAATCAATATCCCTCCTCAGAGAGGACCCCGACCAATCCGTGAGGCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CAA 90 bp | TTGTCCACAGAGGCTCGTGTGAACAAAACCTTCACCCATGTCACACACAGCACTCACCAGCCTCACGGATaGGTCGGGGTCCTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSTEARVNKTFTHVTHSTHQPHG*VGVLSE Trigger: CTCAGAGAGGACCCCGACCAATCCGTGAGGCTGGTG...AGTGCTGTGTGTGACATGGGTGAAGGTTTTGTTCACACGAGCCTCTGTGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CAA 90 bp | GTGGCACACGCCTTAAATACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGTTCCTCGGATTCCTCTaGAGGCTCTGTGACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VAHALNTSIWQAEEGKPLFLGFL*RLCDKA Trigger: GGCTTTGTCACAGAGCCTCAAGAGGAATCCGAGGAA...CAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGTATTTAAGGCGTGTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS-3UTR CAA 90 bp | GTGGCACACGCCTTAAATACCAGCATTTGGCAGGCAGAGGAAGGCAAACCTCTGATCTCTCTGAGGCCTTaGTGGTGGGATCTGAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VAHALNTSIWQAEEGKPLISLRP*WWDLRV Trigger: GACTCTCAGATCCCACCACAAAGGCCTCAGAGAGAT...CAGAGGTTTGCCTTCCTCTGCCTGCCAAATGCTGGTATTTAAGGCGTGTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS TCA 72 bp | GGTTCACCAGCCTCACGGATTGGTCGGGGTCCTCTCTaGGGAGGGATATTGATTCGCTGCTCTCGAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: GSPASRIGRGPL*GGILIRCSRTL Trigger: GAGAGTTCGAGAGCAGCGAATCAATATCCCTCCTCAGAGAGGACCCCGACCAATCCGTGAGGCTGGTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS GCA 72 bp | AGCCCCACTGGGAGGAAGGTTCTTACTCGTCACAGATaGCCAAGAAAACGTCCTCAAGTCCTCCTGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPTGRKVLTRHR*PRKRPQVLLCR Trigger: CCGGCACAGGAGGACTTGAGGACGTTTTCTTGGGCATCTGTGACGAGTAAGAACCTTCCTCCCAGTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS GCA 72 bp | GCTCTTCTGCACATCGTCGGGAGCAGCTTCTTCCAATaGAGCCTCAGGCTTGTCCTCTTGAATGTCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: ALLHIVGSSFFQ*SLRLVLLNVGH Trigger: GTGTCCGACATTCAAGAGGACAAGCCTGAGGCTGCATTGGAAGAAGCTGCTCCCGACGATGTGCAGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS CCA 72 bp | GCAAGGACAAAGGTCTGCATGAACCTCCGCAGAGCCTaGTTGTTGTTGGACAGTAGCCCCATCACTTGGACC | + |
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Preference number: 6 (lower is better) Translates to: ARTKVCMNLRRA*LLLDSSPITWT Trigger: GGTCCAAGTGATGGGGCTACTGTCCAACAACAACCAGGCTCTGCGGAGGTTCATGCAGACCTTTGTCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS CCA 72 bp | AGGTTCCACATCTCCTGGTTCACCAGCCTCACGGATTaGTCGGGGTCCTCTCTGAGGAGGGATATTGATTCG | + |
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Preference number: 6 (lower is better) Translates to: RFHISWFTSLTD*SGSSLRRDIDS Trigger: CGAATCAATATCCCTCCTCAGAGAGGACCCCGACCAATCCGTGAGGCTGGTGAACCAGGAGATGTGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS CAA 72 bp | AGGACAAAGGTCTGCATGAACCTCCGCAGAGCCTGGTaGTTGTTGGACAGTAGCCCCATCACTTGGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: RTKVCMNLRRAW*LLDSSPITWTT Trigger: GGTGGTCCAAGTGATGGGGCTACTGTCCAACAACAACCAGGCTCTGCGGAGGTTCATGCAGACCTTTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS CCA 72 bp | CTCTCGAACTCTCTGATCTCTCTGAGGCCTTTGTGGTaGGATCTGAGAGTCAGGTTTAGATTCTGGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSNSLISLRPLW*DLRVRFRFWTG Trigger: CCCCGTCCAGAATCTAAACCTGACTCTCAGATCCCACCACAAAGGCCTCAGAGAGATCAGAGAGTTCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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| CDS CAA 90 bp | GATATTGATTCGCTGCTCTCGAACTCTCTGATCTCTCTGAGGCCTTaGTGGTGGGATCTGAGAGTCAGGTTTAGATTCTGGACGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DIDSLLSNSLISLRP*WWDLRVRFRFWTGL Trigger: CAGCCCCGTCCAGAATCTAAACCTGACTCTCAGATCCCACCACAAAGGCCTCAGAGAGATCAGAGAGTTCGAGAGCAGCGAATCAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018727.4 |
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