Pregenerated sensors for G2E3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035293Ensembl transcript IDs: ENSMUST00000054308.13, ENSMUST00000119211.8, ENSMUST00000121521.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTAGTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTaGACTAGTGGCCTTGGCTTCTGTAAGAAAGCAAATGAGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ISGEWEGPSPCAVPP*TSGLGFCKKANEQA Trigger: GGCTTGCTCATTTGCTTTCTTACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCACTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 90 bp | GGCAGCAATCACTTTGTATCAACCCCCACCAGCAGACTCCTGCCTTaGCTTCCCTCCTTGAGGAACAGTGCTATTCTGCCTTTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: GSNHFVSTPTSRLLP*LPSLRNSAILPFCL Trigger: GAGACAGAAAGGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTGCTGGTGGGGGTTGATACAAAGTGATTGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 90 bp | CCTGGAAATAGGGAAGGGGTTCAGTATGAGGCAAGAAGGGGAGTATaGCCAAAGCTCATTACACACATGTATGCATGTGTCGTGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: PGNREGVQYEARRGV*PKLITHMYACVVTA Trigger: GGCTGTCACGACACATGCATACATGTGTGTAATGAGCTTTGGTCATACTCCCCTTCTTGCCTCATACTGAACCCCTTCCCTATTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR GCA 90 bp | CCCCACCAGCAGACTCCTGCCTTGACTTCCCTCCTTGAGGAACAGTaGTATTCTGCCTTTCTGTCTCAAGATTCCCAACACATTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: PHQQTPALTSLLEEQ*YSAFLSQDSQHIYL Trigger: TAAATAAATGTGTTGGGAATCTTGAGACAGAAAGGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTGCTGGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 90 bp | TTGTGCCCTAGGGGAAGTATCTCAATTCTGGTGTCCATGGACTCTTaGGCAGAATGGCTTTCCCACCTTCCAGTGAGTTTAATCTTACTC | + |
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Preference number: 1 (lower is better) Translates to: LCPRGSISILVSMDS*AEWLSHLPVSLILL Trigger: GAGTAAGATTAAACTCACTGGAAGGTGGGAAAGCCATTCTGCTCAAGAGTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR GCA 90 bp | AAAGACCACCCCATCCTTATTAGATGCCTGACACAGCTAGAGACATaGAAGCAGAGAACACTTCAACTGAGAAAATGGCTCCATGAAACC | + |
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Preference number: 1 (lower is better) Translates to: KDHPILIRCLTQLET*KQRTLQLRKWLHET Trigger: GGTTTCATGGAGCCATTTTCTCAGTTGAAGTGTTCTCTGCTTGCATGTCTCTAGCTGTGTCAGGCATCTAATAAGGATGGGGTGGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 90 bp | CAGAGACTCTTCAGACACCTAGATGGTTTCAAGCATGAGACATTCTaGCTACTAAAGAACATAAATAGTCTGTGCTTTCTAAGGGATTTT | + |
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Preference number: 1 (lower is better) Translates to: QRLFRHLDGFKHETF*LLKNINSLCFLRDF Trigger: AAAATCCCTTAGAAAGCACAGACTATTTATGTTCTTTAGTAGTCAGAATGTCTCATGCTTGAAACCATCTAGGTGTCTGAAGAGTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCAGGGGGAAGCATAAATaGAGACAACAGAGACCACGC | + |
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Preference number: 2 (lower is better) Translates to: VANGKGPARVQCHPGLVARGKHK*RQQRPR Trigger: GCGTGGTCTCTGTTGTCTGCATTTATGCTTCCCCCT...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR TCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCCAACTTGGAAGGTTCTaGTGCAACCAAGAAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: VANGKGPARVQCHPGLVAQLGRF*CNQENG Trigger: GCCATTTTCTTGGTTGCATCAGAACCTTCCAAGTTG...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CAA 90 bp | GGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTaGGCTTCTGTAAGAAAGCAAATGAGCAAGCCATGGAAAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GKGPARVQCHPGLVA*ASVRKQMSKPWKAR Trigger: CCTTGCTTTCCATGGCTTGCTCATTTGCTTTCTTACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR TCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCCCACCCTATGTTTTATaGAGGCTGTGTTCGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VANGKGPARVQCHPGLVAPPYVL*RLCSLY Trigger: ATAAAGCGAACACAGCCTTCATAAAACATAGGGTGG...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCAACAAATCTGATAGCTaGACAAAACTAGAGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VANGKGPARVQCHPGLVANKSDS*TKLESV Trigger: GACACTCTCTAGTTTTGTGCAGCTATCAGATTTGTT...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CAA 90 bp | AGGCAGCAATCACTTTGTATCAACCCCCACCAGCAGACTCCTGCCTaGACTTCCCTCCTTGAGGAACAGTGCTATTCTGCCTTTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RQQSLCINPHQQTPA*TSLLEEQCYSAFLS Trigger: AGACAGAAAGGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTGCTGGTGGGGGTTGATACAAAGTGATTGCTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR CCA 90 bp | GAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGCATGAGGTTGTGCCAAGAAGCTaGCCAGAATGTTCAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ETMMVQRLFRHLDGFKHEVVPRS*PECSKV Trigger: CACTTTTGAACATTCTGGCCAGCTTCTTGGCACAAC...CTCATGCTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR CCA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTGTTGTGCCAAGAAGCTaGCCAGAATGTTCAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPVVPRS*PECSKV Trigger: CACTTTTGAACATTCTGGCCAGCTTCTTGGCACAAC...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACTACCAGTTTGTGCCCTAGGGGAAGTATCTCAATTCTGGTGTCCATGGACATAAGGCAGGAAGATTaGAAATTTAGAACAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: ITTSLCPRGSISILVSMDIRQED*KFRTVE Trigger: CTCAACTGTTCTAAATTTGCAATCTTCCTGCCTTAT...GTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACAAACTGGTAGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CAA 90 bp | TCCTTTGGCATTAAGAAGGGCATTGTCAATACCAAGTCAATCCTGTaGTTTAAGGGATCTAAGTCCCTTTTAAATCTTGTGTTTCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SFGIKKGIVNTKSIL*FKGSKSLLNLVFLR Trigger: CCTAAGAAACACAAGATTTAAAAGGGACTTAGATCCCTTAAACAACAGGATTGACTTGGTATTGACAATGCCCTTCTTAATGCCAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACAACAAATCTGATAGCTaGACAAAACTAGAGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNNKSDS*TKLESV Trigger: GACACTCTCTAGTTTTGTGCAGCTATCAGATTTGTT...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| 3UTR GCA 72 bp | TTAGTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTaGCACCCTGGACTAGTGGCCTTGGCTTCTGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LVANGKGPARVQ*HPGLVALASVR Trigger: TCTTACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCACTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CCA 72 bp | GAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTaGACTAGTGGCCTTGGCTTCTGTAAGAAAGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: EWEGPSPCAVPP*TSGLGFCKKAN Trigger: ATTTGCTTTCTTACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 72 bp | CACTTTGTATCAACCCCCACCAGCAGACTCCTGCCTTaGCTTCCCTCCTTGAGGAACAGTGCTATTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: HFVSTPTSRLLP*LPSLRNSAILP Trigger: AGGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTGCTGGTGGGGGTTGATACAAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR CAA 90 bp | AAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTTGGCTTCTGTAGAACCAGAAGACATCTaGAAATCTGATGTTTCACTT | + |
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Preference number: 3 (lower is better) Translates to: KGPARVQCHPGLVALASVEPEDI*KSDVSL Trigger: AAGTGAAACATCAGATTTCAAGATGTCTTCTGGTTC...TACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CCA 72 bp | TGTGCCCTAGGGGAAGTATCTCAATTCTGGTGTCCATaGACTCTTGAGCAGAATGGCTTTCCCACCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CALGEVSQFWCP*TLEQNGFPTFQ Trigger: CTGGAAGGTGGGAAAGCCATTCTGCTCAAGAGTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR GCA 72 bp | CAGACTCCTGCCTTGACTTCCCTCCTTGAGGAACAGTaGTATTCTGCCTTTCTGTCTCAAGATTCCCAACAC | + |
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Preference number: 3 (lower is better) Translates to: QTPALTSLLEEQ*YSAFLSQDSQH Trigger: GTGTTGGGAATCTTGAGACAGAAAGGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CCA 72 bp | CTACCAGTTTGTGCCCTAGGGGAAGTATCTCAATTCTaGTGTCCATGGACTCTTGAGCAGAATGGCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LPVCALGEVSQF*CPWTLEQNGFP Trigger: GGGAAAGCCATTCTGCTCAAGAGTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACAAACTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR-3UTR CAA 90 bp | ATAACTACCAGTTTGTGCCCTAGGGGAAGTATCTCAATTCTGGTGTCCATGGACCCTGGACTAGTGGCCTaGGCTTCTGTAAGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: ITTSLCPRGSISILVSMDPGLVA*ASVRKQ Trigger: TTGCTTTCTTACAGAAGCCAAGGCCACTAGTCCAGG...GTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACAAACTGGTAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 72 bp | AGGGAAGGGGTTCAGTATGAGGCAAGAAGGGGAGTATaGCCAAAGCTCATTACACACATGTATGCATGTGTC | + |
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Preference number: 3 (lower is better) Translates to: REGVQYEARRGV*PKLITHMYACV Trigger: GACACATGCATACATGTGTGTAATGAGCTTTGGTCATACTCCCCTTCTTGCCTCATACTGAACCCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 72 bp | AACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATaGGAAAGTTATAAATTTTGTTGTGCCAAGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: NLQWFGSQTIPL*ESYKFCCAKKL Trigger: CAGCTTCTTGGCACAACAAAATTTATAACTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| 3UTR TCA 72 bp | CTTTCCCACCTTCCAGTGAGTTTAATCTTACTCACCTaGGAATCCCCACTTTTAAGTACAAATTTGTCATTT | + |
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Preference number: 3 (lower is better) Translates to: LSHLPVSLILLT*ESPLLSTNLSF Trigger: AAATGACAAATTTGTACTTAAAAGTGGGGATTCTCAGGTGAGTAAGATTAAACTCACTGGAAGGTGGGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 72 bp | ATAGGTCATGCTAATATAGCCGAGCACCTGTACAGTTaGACGGTTTGTACAACCATTCTAAAAATATATGAA | + |
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Preference number: 3 (lower is better) Translates to: IGHANIAEHLYS*TVCTTILKIYE Trigger: TTCATATATTTTTAGAATGGTTGTACAAACCGTTCAACTGTACAGGTGCTCGGCTATATTAGCATGACCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| 3UTR TCA 72 bp | TTCAGACACCTAGATGGTTTCAAGCATGAGACATTCTaGCTACTAAAGAACATAAATAGTCTGTGCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: FRHLDGFKHETF*LLKNINSLCFL Trigger: TAGAAAGCACAGACTATTTATGTTCTTTAGTAGTCAGAATGTCTCATGCTTGAAACCATCTAGGTGTCTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR TCA 72 bp | GTGATGTCGTGCCTTGAGATGAGACTGTACATATCTTaGTTTTATTACGTGGTTTCTTGTTACTCTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: VMSCLEMRLYIS*FYYVVSCYSFT Trigger: TGTAAAAGAGTAACAAGAAACCACGTAATAAAATCAAGATATGTACAGTCTCATCTCAAGGCACGACATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR GCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCCTCAGTAGTTCTTTATaGTGGGCTACAGTTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: VANGKGPARVQCHPGLVALSSSL*WATVDC Trigger: ACAGTCAACTGTAGCCCAGCATAAAGAACTACTGAG...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CAA 72 bp | CCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTaGGCTTCTGTAAGAAAGCAAATGAGCAAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PARVQCHPGLVA*ASVRKQMSKPW Trigger: CCATGGCTTGCTCATTTGCTTTCTTACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR TCA 90 bp | GAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTTGGCTGCAACATCAATGTCTaGTACATCATCCAAAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EWEGPSPCAVPPWTSGLGCNINV*YIIQSW Trigger: CCAACTTTGGATGATGTATCAGACATTGATGTTGCA...GCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR CCA 90 bp | GTGGCGAATGGGAAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCGCTGGTAGAACTAAATaGTTTCTATATTTGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VANGKGPARVQCHPGLVAAGRTK*FLYLSA Trigger: TGCAGACAAATATAGAAACCATTTAGTTCTACCAGC...GGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTTCCCATTCGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| 3UTR CAA 72 bp | TCACTTTGTATCAACCCCCACCAGCAGACTCCTGCCTaGACTTCCCTCCTTGAGGAACAGTGCTATTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SLCINPHQQTPA*TSLLEEQCYSA Trigger: GGCAGAATAGCACTGTTCCTCAAGGAGGGAAGTCAAGGCAGGAGTCTGCTGGTGGGGGTTGATACAAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR CCA 90 bp | TGGCGCGAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGCTGTACACTTCAGTTTaGAGGCTCTCTGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: WRETMMVQRLFRHLDGFKLYTSV*RLSGLP Trigger: AGGAAGTCCAGAGAGCCTCCAAACTGAAGTGTACAG...CTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTCGCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR CCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATAGTTTGGAGGCTCTCTaGACTTCCTTCCTGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYSLEAL*TSFLMS Trigger: AGACATCAGGAAGGAAGTCCAGAGAGCCTCCAAACT...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CCA 90 bp | TGGCGCGAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGAGTAGTTCTTTATGCTaGGCTACAGTTGACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: WRETMMVQRLFRHLDGFKSSSLC*ATVDCL Trigger: CAGACAGTCAACTGTAGCCCAGCATAAAGAACTACT...CTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTCGCGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
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| CDS-3UTR TCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGGTCCGAGGTAGTATGTaGGACCTTTCTTCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKVRGSM*DLSSFS Trigger: AGAAAAGGAAGAAAGGTCTCACATACTACCTCGGAC...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGGAAGGGTTAAACTTCTaGCTCTGGAACTGCTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKEGLNF*LWNCSK Trigger: CTTAGAGCAGTTCCAGAGCCAGAAGTTTAACCCTTC...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
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| CDS-3UTR TCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATTACCACACATCCAATTaGAGCACCATTCTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYYHTSN*STILLA Trigger: TGCAAGAAGAATGGTGCTTCAATTGGATGTGTGGTA...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR TCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGTACCACACATCCAATTaGAGCACCATTCTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKYHTSN*STILLA Trigger: TGCAAGAAGAATGGTGCTTCAATTGGATGTGTGGTA...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGAACTTCGTTTACACGTaGGTACCACACATCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKNFVYT*VPHIQL Trigger: CAATTGGATGTGTGGTACCCACGTGTAAACGAAGTT...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATAGTAGTTCTTTATGCTaGGCTACAGTTGACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYSSSLC*ATVDCL Trigger: CAGACAGTCAACTGTAGCCCAGCATAAAGAACTACT...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR TCA 90 bp | GAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGCATGAGGGCCTTTTGGAAATCTaGAGTGTAGGTAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETMMVQRLFRHLDGFKHEGLLEI*SVGNSS Trigger: AGAAGAATTACCTACACTTCAGATTTCCAAAAGGCC...CTCATGCTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGCAGAAATTCCTGCTTTaGTCCAAGATGCTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDSLFYIDRFQDNQDYVEQKFLL*SKMLAS Trigger: GGAAGCCAGCATCTTGGATCAAAGCAGGAATTTCTG...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGCTGTACACTTCAGTTTaGAGGCTCTCTGGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FDSLFYIDRFQDNQDYVELYTSV*RLSGLP Trigger: AGGAAGTCCAGAGAGCCTCCAAACTGAAGTGTACAG...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | GAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGCATGAGCCTGCATTTATTGCTTaGACCTGTAAACAGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ETMMVQRLFRHLDGFKHEPAFIA*TCKQSL Trigger: TAGAGACTGTTTACAGGTCCAAGCAATAAATGCAGG...CTCATGCTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATCCTGCATTTATTGCTTaGACCTGTAAACAGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYPAFIA*TCKQSL Trigger: TAGAGACTGTTTACAGGTCCAAGCAATAAATGCAGG...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGCCTGCATTTATTGCTTaGACCTGTAAACAGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKPAFIA*TCKQSL Trigger: TAGAGACTGTTTACAGGTCCAAGCAATAAATGCAGG...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACCAGAAATTCCTGCTTTaGTCCAAGATGCTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNQKFLL*SKMLAS Trigger: GGAAGCCAGCATCTTGGATCAAAGCAGGAATTTCTG...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGGTCCGAGGTAGTATGTaGGACCTTTCTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FDSLFYIDRFQDNQDYVEVRGSM*DLSSFS Trigger: AGAAAAGGAAGAAAGGTCTCACATACTACCTCGGAC...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATAAGCACCATTCTTCTTaGAAACTGTACACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYKHHSS*KLYTSV Trigger: AACTGAAGTGTACAGTTTGCAAGAAGAATGGTGCTT...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGAAGCACCATTCTTCTTaGAAACTGTACACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKKHHSS*KLYTSV Trigger: AACTGAAGTGTACAGTTTGCAAGAAGAATGGTGCTT...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGTATCCTGTTAATATTTAGACCATCTCACCAACAAGGCCATTGTCTTACCAGTTTGGAGGCTCTCTaGACTTCCTTCCTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSILLIFRPSHQQGHCLTSLEAL*TSFLMS Trigger: AGACATCAGGAAGGAAGTCCAGAGAGCCTCCAAACT...GGTAAGACAATGGCCTTGTTGGTGAGATGGTCTAAATATTAACAGGATACTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR TCA 90 bp | AAAATTAAACCCAAGGCCTTCCACATACTAGCTAGGCAAACCATTCTACTACCATACCACACATCCAATTaGAGCACCATTCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KIKPKAFHILARQTILLPYHTSN*STILLA Trigger: TGCAAGAAGAATGGTGCTTCAATTGGATGTGTGGTA...TGGTAGTAGAATGGTTTGCCTAGCTAGTATGTGGAAGGCCTTGGGTTTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR TCA 90 bp | AAAATTAAACCCAAGGCCTTCCACATACTAGCTAGGCAAACCATTCTACTACCATTAGATGTAATTGCTTaGACGGGTCGATGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIKPKAFHILARQTILLPLDVIA*TGRCFQ Trigger: CTGGAAACATCGACCCGTTCAAGCAATTACATCTAA...TGGTAGTAGAATGGTTTGCCTAGCTAGTATGTGGAAGGCCTTGGGTTTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR GCA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTCTCAGTAGTTCTTTATaGTGGGCTACAGTTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPLSSSL*WATVDC Trigger: ACAGTCAACTGTAGCCCAGCATAAAGAACTACTGAG...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTAACTTCGTTTACACGTaGGTACCACACATCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPNFVYT*VPHIQL Trigger: CAATTGGATGTGTGGTACCCACGTGTAAACGAAGTT...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGCTGGTAGAACTAAATaGTTTCTATATTTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYAGRTK*FLYLSA Trigger: TGCAGACAAATATAGAAACCATTTAGTTCTACCAGC...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGGCTGGTAGAACTAAATaGTTTCTATATTTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKAGRTK*FLYLSA Trigger: TGCAGACAAATATAGAAACCATTTAGTTCTACCAGC...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTGGCCTTTTGGAAATCTaGAGTGTAGGTAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPGLLEI*SVGNSS Trigger: AGAAGAATTACCTACACTTCAGATTTCCAAAAGGCC...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGTGCAACATCAATGTCTaGTACATCATCCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FDSLFYIDRFQDNQDYVECNINV*YIIQSW Trigger: CCAACTTTGGATGATGTATCAGACATTGATGTTGCA...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGGCTGTGGTTGATAACTaGATTTCTTGCTTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FDSLFYIDRFQDNQDYVEAVVDN*ISCFSL Trigger: GAGACTAAAGCAAGAAATTCAGTTATCAACCACAGC...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119211.8 |
||
| CDS-3UTR CCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTAGTTTGGAGGCTCTCTaGACTTCCTTCCTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMISLEAL*TSFLMS Trigger: AGACATCAGGAAGGAAGTCCAGAGAGCCTCCAAACT...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACAACTTCGTTTACACGTaGGTACCACACATCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNNFVYT*VPHIQL Trigger: CAATTGGATGTGTGGTACCCACGTGTAAACGAAGTT...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACGGCCTTTTGGAAATCTaGAGTGTAGGTAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNGLLEI*SVGNSS Trigger: AGAAGAATTACCTACACTTCAGATTTCCAAAAGGCC...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACTGCAACATCAATGTCTaGTACATCATCCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNCNINV*YIIQSW Trigger: CCAACTTTGGATGATGTATCAGACATTGATGTTGCA...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR TCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTGTCCGAGGTAGTATGTaGGACCTTTCTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMIVRGSM*DLSSFS Trigger: AGAAAAGGAAGAAAGGTCTCACATACTACCTCGGAC...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR GCA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTAAGCACCATTCTTCTTaGAAACTGTACACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPKHHSS*KLYTSV Trigger: AACTGAAGTGTACAGTTTGCAAGAAGAATGGTGCTT...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTGAAGGGTTAAACTTCTaGCTCTGGAACTGCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMIEGLNF*LWNCSK Trigger: CTTAGAGCAGTTCCAGAGCCAGAAGTTTAACCCTTC...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR TCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTTTAGATGTAATTGCTTaGACGGGTCGATGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMILDVIA*TGRCFQ Trigger: CTGGAAACATCGACCCGTTCAAGCAATTACATCTAA...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTAGTAGTTCTTTATGCTaGGCTACAGTTGACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMISSSLC*ATVDCL Trigger: CAGACAGTCAACTGTAGCCCAGCATAAAGAACTACT...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACGTTTCTATATTTGTCTaGAACAGGAAAATCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNVSIFV*NRKIHM Trigger: CATGTGGATTTTCCTGTTGCAGACAAATATAGAAAC...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR GCA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTCTAAATTTGCTGCCTTaGCTTTGTGTTAAACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VINFVVPRSWPECSKVMILNLLP*LCVKQD Trigger: GTCCTGTTTAACACAAAGGCAAGGCAGCAAATTTAG...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119211.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTTGGCTTCTGTAGCACTCCTCCACACATaGGCTTTGTTGATGTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: KGPARVQCHPGLVALASVALLHT*ALLMYN Trigger: ATTATACATCAACAAAGCCAATGTGTGGAGGAGTGC...TACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCCAGCCCGTGTGCAGTGCCACCCTGGACTAGTGGCCTTGGCTTCTGTACTCTCAAAAGGTGCCTaGACTCTATTAATTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: KGPARVQCHPGLVALASVLSKGA*TLLITW Trigger: CCATGTAATTAATAGAGTCAAGGCACCTTTTGAGAG...TACAGAAGCCAAGGCCACTAGTCCAGGGTGGCACTGCACACGGGCTGGGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS CCA 90 bp | CCATTAACATACACTACGTCAATGGAGCATGAAGGGTTAAACTTCTaGCTCTGGAACTGCTCTAAGGCACTCCTCCACACATTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLTYTTSMEHEGLNF*LWNCSKALLHTLAL Trigger: CAAAGCCAATGTGTGGAGGAGTGCCTTAGAGCAGTTCCAGAGCCAGAAGTTTAACCCTTCATGCTCCATTGACGTAGTGTATGTTAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGACACTCCTGCATTTATaGCTTGGACCTGTAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKTLLHL*LGPVNS Trigger: ACTGTTTACAGGTCCAAGCAATAAATGCAGGAGTGT...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CAA 90 bp | TGGCGCGAAACCATGATGGTCCAGAGACTCTTCAGACACCTAGATGGTTTCAAGATACATCATCCAAAGTaGGTAGAGTATTTTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WRETMMVQRLFRHLDGFKIHHPK*VEYFLV Trigger: GACCAGAAAATACTCTACCAACTTTGGATGATGTAT...CTTGAAACCATCTAGGTGTCTGAAGAGTCTCTGGACCATCATGGTTTCGCGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR CAA 90 bp | ATAACTACCAGTTTGTGCCCTAGGGGAAGTATCTCAATTCTGGTGTCCATGGACTCTGCCAAATTCCACTaGACATTAACAAGCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ITTSLCPRGSISILVSMDSAKFH*TLTSSS Trigger: ACTACTGCTTGTTAATGTCAAGTGGAATTTGGCAGA...GTCCATGGACACCAGAATTGAGATACTTCCCCTAGGGCACAAACTGGTAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR CAA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGTCTGCCAAATTCCACTaGACATTAACAAGCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKSAKFH*TLTSSS Trigger: ACTACTGCTTGTTAATGTCAAGTGGAATTTGGCAGA...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATGAGAAAGCTCTCAAAAGGTGCCTaGACTCTATTAATTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALTKPSVVRKPNHPFMRKLSKGA*TLLITW Trigger: CCATGTAATTAATAGAGTCAAGGCACCTTTTGAGAG...CTTTCTCATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
||
| CDS-3UTR CAA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGATGTCTCTCCTAAATTaGCTGCCTTGCCTCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FDSLFYIDRFQDNQDYVEMSLLN*LPCLSS Trigger: ACTACTGAGGCAAGGCAGCAAATTTAGGAGAGACAT...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054308.13 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGGCCTTAACCAAACCTTCAGTGGTTCGGAAGCCAAACCATCCCTTTATCTCCACACATTGGCTTaGTTGATGTATAATGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LEGLNQTFSGSEAKPSLYLHTLA*LMYNVL Trigger: TAAGACATTATACATCAACAAAGCCAATGTGTGGAG...ATAAAGGGATGGTTTGGCTTCCGAACCACTGAAGGTTTGGTTAAGGCCTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR CAA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTTGGCTTCCAACCTCATaGCCATTAACATACACTACG | + |
|
Preference number: 5 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPWLPTS*PLTYTT Trigger: CGTAGTGTATGTTAATGGCAATGAGGTTGGAAGCCA...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
||
| CDS-3UTR CAA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTTCTGCCAAATTCCACTaGACATTAACAAGCAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPSAKFH*TLTSSS Trigger: ACTACTGCTTGTTAATGTCAAGTGGAATTTGGCAGA...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CAA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACACACTCCTGCATTTATaGCTTGGACCTGTAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNTLLHL*LGPVNS Trigger: ACTGTTTACAGGTCCAAGCAATAAATGCAGGAGTGT...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CAA 90 bp | AGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGAAAAACGCACTCCTCCACACATaGGCTTTGTTGATGTATAAT | + |
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Preference number: 5 (lower is better) Translates to: SLFYIDRFQDNQDYVEKNALLHT*ALLMYN Trigger: ATTATACATCAACAAAGCCAATGTGTGGAGGAGTGC...GTTTTTCTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
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| CDS-3UTR CAA 90 bp | TTTGACAGCTTGTTCTACATAGACAGGTTCCAAGACAATCAGGACTATGTAGAGATACATCATCCAAAGTaGGTAGAGTATTTTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FDSLFYIDRFQDNQDYVEIHHPK*VEYFLV Trigger: GACCAGAAAATACTCTACCAACTTTGGATGATGTAT...CTCTACATAGTCCTGATTGTCTTGGAACCTGTCTATGTAGAACAAGCTGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CAA 90 bp | TTACGAAGGCAACACAGTAATAGAAAGCTATCACCAAACATGACTAGAAGGCCTATACATCATCCAAAGTaGGTAGAGTATTTTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LRRQHSNRKLSPNMTRRPIHHPK*VEYFLV Trigger: GACCAGAAAATACTCTACCAACTTTGGATGATGTAT...AGGCCTTCTAGTCATGTTTGGTGATAGCTTTCTATTACTGTGTTGCCTTCGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 ENSMUST00000121521.2 |
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| CDS-3UTR CAA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTATGTCTCTCCTAAATTaGCTGCCTTGCCTTTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: VINFVVPRSWPECSKVMIMSLLN*LPCLCV Trigger: AACACAAAGGCAAGGCAGCAAATTTAGGAGAGACAT...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119211.8 |
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| CDS-3UTR CAA 90 bp | GTTATAAATTTTGTTGTGCCAAGAAGCTGGCCAGAATGTTCAAAAGTGATGATTCTCCACACATTGGCTTaGTTGATGTATAATGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VINFVVPRSWPECSKVMILHTLA*LMYNVL Trigger: TAAGACATTATACATCAACAAAGCCAATGTGTGGAG...AATCATCACTTTTGAACATTCTGGCCAGCTTCTTGGCACAACAAAATTTATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
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| CDS CCA 72 bp | ACGTCAATGGAGCATGAAGGGTTAAACTTCTGGCTCTaGAACTGCTCTAAGGCACTCCTCCACACATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TSMEHEGLNFWL*NCSKALLHTLA Trigger: AGCCAATGTGTGGAGGAGTGCCTTAGAGCAGTTCCAGAGCCAGAAGTTTAACCCTTCATGCTCCATTGACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054308.13 ENSMUST00000119211.8 |
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