Pregenerated sensors for FZD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049551Ensembl transcript IDs: ENSMUST00000062572.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGACCCTGCCCCCTTCTGCCCCTTCTTATCCTGGGACCCTCTGTaGACTAGGACCACTCCCTGCATGAGACAGAAGGTCAAGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LDPAPFCPFLSWDPL*TRTTPCMRQKVKAL Trigger: CAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAAGGGGGCAGGGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR CCA 90 bp | GACCACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTaGGTCCCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: DHSLHETEGQGPELY*VPTLVLSPLCLTCL Trigger: CAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR CCA 72 bp | CTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTaGGTCCCCACCCTAGTCCTCAGCCCCCTGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LHETEGQGPELY*VPTLVLSPLCL Trigger: GAGACACAGGGGGCTGAGGACTAGGGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR CCA 72 bp | GCCCCCTTCTGCCCCTTCTTATCCTGGGACCCTCTGTaGACTAGGACCACTCCCTGCATGAGACAGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: APFCPFLSWDPL*TRTTPCMRQKV Trigger: GACCTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAAGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACCCCCTGTGTCTCACTaGTCTGACCTTGACAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRPPVSH*SDLDSW Trigger: CCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGG...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR GCA 72 bp | TTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTaGATGAGACAGAAGGTCAAGGCCCTGAGCTTTACT | + |
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Preference number: 3 (lower is better) Translates to: LSWDPLWTRTTP*MRQKVKALSFT Trigger: AGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | CCCCCTTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGGGTTCGGCAGGCCTTaGCCCGGGCTCGGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPSAPSYPGTLCGLGPLPGFGRP*PGLGQL Trigger: CAGCTGGCCGAGCCCGGGCCAAGGCCTGCCGAACCC...AGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCATCGCTTGGCACGGTaGGGGGCCACGGCCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: PTLVLSPLCLTCLTLTAGHRLAR*GATATL Trigger: GAGCGTGGCCGTGGCCCCGCACCGTGCCAAGCGATG...CCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTACCCGTCGCCAGCAGCTaGCACAGCAGCAGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLPVASS*HSSSAP Trigger: CGGGGCGCTGCTGCTGTGGCAGCTGCTGGCGACGGG...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | ACCACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCAGCCGCCGCCTCGCCCTaGGACGTGTGGCCCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: TTPCMRQKVKALSFTGSPAAASP*DVWPSR Trigger: CCTACTGGGCCACACGTCGCAGGGCGAGGCGGCGGC...TGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTGCGTGCGGGTCGTTaGGCGTGGGGAGCCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLVRAGR*AWGAGH Trigger: GTGCCCGGCTCCCCACGCGCAACGACCCGCACGCAC...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCCCTCGCGGGCCGAGGTaGCACAGGGAGCATGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HSLHETEGQGPELYWVPTPRGPR*HREHAQ Trigger: CTGGGCATGCTCCCTGTGGCACCTCGGCCCGCGAGG...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGCAGCGCAGGCGAGCCTaGTCGCACATGGGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FCPFLSWDPLWTRTTPCMQRRRA*SHMGRQ Trigger: CTGCCGGCCCATGTGCGAGCAGGCTCGCCTGCGCTG...CATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGGGCACCGAGCCCCCTaGCAGCGAGCAGTCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLGHRAP*QRAVSP Trigger: CGGAGAGACTGCTCGCTGCCAGGGGGCTCGGTGCCC...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGCCGGCAGGCTGGGATaGGAGTGGAGACCTGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLAGRLG*EWRPGR Trigger: CCGACCAGGTCTCCACTCCCATCCCAGCCTGCCGGC...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGGAGAACTCGGCCAGCTaGGCCGCCGCCTCGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKENSAS*AAASPC Trigger: GCAGGGCGAGGCGGCGGCGCAGCTGGCCGAGTTCTC...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCTCCATACAGAGTGCGTaGGGGTCGTTGCGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HSLHETEGQGPELYWVPTSIQSA*GSLRVG Trigger: CCCCACGCGCAACGACCCGCACGCACTCTGTATGGA...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCTCGCCCTGCGACGTGTaGCCCAGTAGGTTGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: HSLHETEGQGPELYWVPTSPCDV*PSRLGM Trigger: CATGCCCAACCTACTGGGCCACACGTCGCAGGGCGA...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACAGAAGGAACACCTCGACGCCTaGCCCGCAGCGCGGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FLSWDPLWTRTTPCMRQKEHLDA*PAARSA Trigger: TGCGCTCCGCGCTGCGGGCCAGGCGTCGAGGTGTTC...CTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | CCCCCTTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTAGAGCCCCTGCCTCCTaGTCGCATGCCACACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PPSAPSYPGTLCGLGPLPRAPAS*SHATLC Trigger: ACAGAGTGTGGCATGCGACCAGGAGGCAGGGGCTCT...AGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGGTGCCACAGGGAGCATaGCCAGGCCCTTGTGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FCPFLSWDPLWTRTTPCMVPQGA*PGPCGV Trigger: AACCCCACAAGGGCCTGGGCATGCTCCCTGTGGCAC...CATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGATGGCAGGCCCCACGCTaGCATGTGGAAGTAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRWQAPR*HVEVAA Trigger: GGCAGCTACTTCCACATGGCAGCGTGGGGCCTGCCA...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCGCAGCAGTACATGGTTaGTCTGTGGCCCGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HSLHETEGQGPELYWVPTAAVHG*SVARSR Trigger: GCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGC...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGGCGGGTCGTTGCGCGTaGGGAGCCGGGCACAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKAGRCA*GAGHSR Trigger: TCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGC...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGATGCCCAGGCCCTTGTaGGGTTCTGTGGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FCPFLSWDPLWTRTTPCMMPRPL*GSVGPA Trigger: AGCAGGCCCCACAGAACCCCACAAGGGCCTGGGCAT...CATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| 3UTR CAA 72 bp | GGTCCCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTaGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GPHPSPQPPVSH*SDLDSWAAVSQ Trigger: CTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGATGCCTCCATACAGAGTaGGTGCGGGTCGTTGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRCLHTE*VRVVAR Trigger: ACGCGCAACGACCCGCACGCACTCTGTATGGAGGCA...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | ACCACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCATGCCTCCTGGTCGCATaGCACACTCTGTGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TTPCMRQKVKALSFTGSPCLLVA*HTLCTC Trigger: GCAGGTGCACAGAGTGTGGCATGCGACCAGGAGGCA...TGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAAAAGCCAGTGAGGGCTaGCGGGTCCATGCTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLKASEG*RVHAGY Trigger: GTAGCCAGCATGGACCCGGCAGCCCTCACTGGCTTT...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTACCGGGCTCGGCCAGCTaGCATTTTTCGGTAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLPGSAS*HFSVAQ Trigger: CTGTGCTACCGAAAAATGGCAGCTGGCCGAGCCCGG...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | ACCACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCAAAACGTAGCAGACAATaGCGCAGGTGGCCGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: TTPCMRQKVKALSFTGSPKRSRQ*RRWPAL Trigger: CAGTGCCGGCCACCTGCGTCATTGTCTGCTACGTTT...TGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | CCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCCCAGACTCCACTGGTaGTGCCCACCACCAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: PLCLTCLTLTAGQLLVSCPRLHW*CPPPRT Trigger: TGTCCTTGGTGGTGGGCATCACCAGTGGAGTCTGGG...ACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CCCCCTTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTCAGCCGAAATTGAATTaGTCCATGATGGGGGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPSAPSYPGTLCGLGPLPQPKLN*SMMGAQ Trigger: CTGCGCCCCCATCATGGAGCAATTCAATTTCGGCTG...AGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | CCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGTCTGTCTTAGTCATGTaGAAGACCACCGTGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PTLVLSPLCLTCLTLTAGSVLVM*KTTVGA Trigger: AGCCCCCACGGTGGTCTTGCACATGACTAAGACAGA...CCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCCGGTCAGGAGGAAACTaGTACCCAGTACCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HSLHETEGQGPELYWVPTRSGGN*YPVPGS Trigger: GCTACCTGGTACTGGGTACCAGTTTCCTCCTGACCG...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGCCGGGCACAGTCGAGTaGGTCGGGCCAGCCGAAATT | + |
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Preference number: 4 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKPGTVE*VGPAEI Trigger: AATTTCGGCTGGCCCGACTCACTCGACTGTGCCCGG...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACAGAAGTGGAGACCTGGTCGGTaGACATTGGGGCGTAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: FLSWDPLWTRTTPCMRQKWRPGR*TLGRRA Trigger: CGCTCTACGCCCCAATGTGCACCGACCAGGTCTCCA...CTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGATGTGCAAGACCACCGTaGGGGCTTTGTAGTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRCARPP*GLCSGS Trigger: ACTGCCACTACAAAGCCCCCACGGTGGTCTTGCACA...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | CCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGAGGCTCTGCCAAGTCTaGAAAGTCTTGGAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PTLVLSPLCLTCLTLTAGRLCQV*KVLELH Trigger: ATGGAGTTCCAAGACTTTTCAGACTTGGCAGAGCCT...CCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACAGAAGCCATGTGGAAGTAGCTaGCGTGAGCCTCGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLSWDPLWTRTTPCMRQKPCGSS*REPRWP Trigger: AGGCCATCGAGGCTCACGGCAGCTACTTCCACATGG...CTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR GCA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGCATCGCCAGCCACCTTaGGCAGAGTCAGGACCACGA | + |
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Preference number: 4 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKHRQPP*AESGPR Trigger: TCGTGGTCCTGACTCTGCGCAAGGTGGCTGGCGATG...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACAGAAGTGTGGCCCAGTAGGTTaGGCATGCGGGTCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FLSWDPLWTRTTPCMRQKCGPVG*ACGSGC Trigger: ACAACCTGACCCGCATGCCCAACCTACTGGGCCACA...CTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | TTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGTTTTCCAGACCCTCCTaGATCACATACAGAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: FCPFLSWDPLWTRTTPCMFSRPS*ITYRAP Trigger: AGGGGCTCTGTATGTGATCCAGGAGGGTCTGGAAAA...CATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | CCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTTGCCTCCCGTCTTCATaGTTTTGCGGATATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PLCLTCLTLTAGQLLVSCCLPSS*FCGYGR Trigger: TCTTCCATATCCGCAAAATCATGAAGACGGGAGGCA...ACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAAAGTCTGAAAAGTCTTaGAACTCCATACCCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLKSEKS*NSIPRL Trigger: GAGTCTGGGTATGGAGTTCCAAGACTTTTCAGACTT...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR TCA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGAAAAGACTCCGATTTTaGCCATCAGCTTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKKRLRF*PSASPA Trigger: AGCTGGAGAAGCTGATGGTCAAAATCGGAGTCTTTT...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS TCA 90 bp | CTTCTCGGGGTTGTCGCAGGTGCCACCGCTGCCGGGACCTGGGGCTaGATCTCCCGGTGGCCTCGCGGGCCGAGGTGCCACAGGGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGVVAGATAAGTWG*ISRWPRGPRCHREH Trigger: ATGCTCCCTGTGGCACCTCGGCCCGCGAGGCCACCGGGAGATTCAGCCCCAGGTCCCGGCAGCGGTGGCACCTGCGACAACCCCGAGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 90 bp | CCGAGCCCCCTGGCAGCGAGCAGTCTCTCCGGCCTCCAGGCACGGTaGCAGCAGTACATGGTTGCTCTGTGGCCCGAAGCCGCCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLAASSLSGLQAR*QQYMVALWPEAARS Trigger: ACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTCGCTGCCAGGGGGCTCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS TCA 90 bp | GAGTGCGTGCGGGTCGTTGCGCGTGGGGAGCCGGGCACAGTCGAGTaGGTCGGGCCAGCCGAAATTGAATTGCTCCATGATGGGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ECVRVVARGEPGTVE*VGPAEIELLHDGGA Trigger: TGCGCCCCCATCATGGAGCAATTCAATTTCGGCTGGCCCGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 90 bp | CCGAAATTGAATTGCTCCATGATGGGGGCGCAGCGCAGGCGAGCCTaGTCGCACATGGGCCGGCAGGCTGGGATGGGAGTGGAGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLNCSMMGAQRRRA*SHMGRQAGMGVETW Trigger: CCAGGTCTCCACTCCCATCCCAGCCTGCCGGCCCATGTGCGAGCAGGCTCGCCTGCGCTGCGCCCCCATCATGGAGCAATTCAATTTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 90 bp | TGCCACAGGGAGCATGCCCAGGCCCTTGTGGGGTTCTGTGGGGCCTaGTGTAGCGTTCTCGGGTGCCTCCATACAGAGTGCGTGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHREHAQALVGFCGA*CSVLGCLHTECVRV Trigger: GACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGCAGGCCCCACAGAACCCCACAAGGGCCTGGGCATGCTCCCTGTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGGGGTTCGGCAGGCCTaGGCCCGGGCTCGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSPLCLTCLTLTAGQLLGVRQA*ARARPA Trigger: AGCTGGCCGAGCCCGGGCCAAGGCCTGCCGAACCCC...TAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 90 bp | CAGCGAGCAGTCTCTCCGGCCTCCAGGCACGGTGGCAGCAGTACATaGTTGCTCTGTGGCCCGAAGCCGCCAGAAGTCCATGTTGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRAVSPASRHGGSST*LLCGPKPPEVHVEA Trigger: CGCCTCAACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 90 bp | GAAGATTTTGAGCATGAAGACAGCCACAGTGGGCACCGAGCCCCCTaGCAGCGAGCAGTCTCTCCGGCCTCCAGGCACGGTGGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EDFEHEDSHSGHRAP*QRAVSPASRHGGSS Trigger: ACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTCGCTGCCAGGGGGCTCGGTGCCCACTGTGGCTGTCTTCATGCTCAAAATCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 90 bp | GAGCAGTCTCTCCGGCCTCCAGGCACGGTGGCAGCAGTACATGGTTaGTCTGTGGCCCGAAGCCGCCAGAAGTCCATGTTGAGGCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQSLRPPGTVAAVHG*SVARSRQKSMLRRS Trigger: TGAACGCCTCAACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGAGTGCGTGCGGGTCGTaGCGCGTGGGGAGCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKSACGS*RVGSRA Trigger: TGCCCGGCTCCCCACGCGCAACGACCCGCACGCACT...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | TTCTGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGCATGCCCAGGCCCTaGTGGGGTTCTGTGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FCPFLSWDPLWTRTTPCMSMPRP*WGSVGP Trigger: AGGCCCCACAGAACCCCACAAGGGCCTGGGCATGCT...CATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 90 bp | GTGTTTTCCAGACCCTCCTGGATCACATACAGAGCCCCTGCCTCCTaGTCGCATGCCACACTCTGTGCACCTGCCACCGCTCTGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSRPSWITYRAPAS*SHATLCAPATALIR Trigger: CCTGATCAGAGCGGTGGCAGGTGCACAGAGTGTGGCATGCGACCAGGAGGCAGGGGCTCTGTATGTGATCCAGGAGGGTCTGGAAAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGATGGAACTTCTCGGGGTaGTCGCAGGTGCCACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRWNFSG*SQVPPL Trigger: CAGCGGTGGCACCTGCGACAACCCCGAGAAGTTCCA...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGAGGCAGCAGTACATGGTaGCTCTGTGGCCCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPFLSWDPLWTRTTPCMRGSSTW*LCGPKP Trigger: CGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCC...TCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCTCCAGCTTCTCCGTATaGGTGCCTCCCGTCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: HSLHETEGQGPELYWVPTSSFSV*VPPVFM Trigger: CATGAAGACGGGAGGCACCAATACGGAGAAGCTGGA...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS TCA 90 bp | TACCCAGTACCAGGTAGCAAGATAGGGGTACCAACACAAAGCCAGTaGGGGCTGCCGGGTCCATGCTGGCTACATAGCAGAGCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPVPGSKIGVPTQSQ*GLPGPCWLHSRAQS Trigger: TGACTGGGCTCTGCTATGTAGCCAGCATGGACCCGGCAGCCCTCACTGGCTTTGTGTTGGTACCCCTATCTTGCTACCTGGTACTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | CACTCCCTGCATGAGACAGAAGGTCAAGGCCCTGAGCTTTACTGGGTCCCCACCGAAAAGACTCCGATTTaGACCATCAGCTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLHETEGQGPELYWVPTEKTPI*TISFSS Trigger: GCTGGAGAAGCTGATGGTCAAAATCGGAGTCTTTTC...GGTGGGGACCCAGTAAAGCTCAGGGCCTTGACCTTCTGTCTCATGCAGGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACTTGTCTGACCTTGACAGCTGGGCAGCTGTTAGTCAGCTGTCTCTGAAGCCAGCCGAAATTGAATaGCTCCATGATGGGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLSDLDSWAAVSQLSLKPAEIE*LHDGGA Trigger: TGCGCCCCCATCATGGAGCAATTCAATTTCGGCTGG...CTTCAGAGACAGCTGACTAACAGCTGCCCAGCTGTCAAGGTCAGACAAGTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS-3UTR CAA 90 bp | CCCACCCTAGTCCTCAGCCCCCTGTGTCTCACTTGTCTGACCTTGACAGCTGGGAAGGACATGAAGATTTaGAGCATGAAGACAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTLVLSPLCLTCLTLTAGKDMKI*SMKTAT Trigger: TGTGGCTGTCTTCATGCTCAAAATCTTCATGTCCTT...CCCAGCTGTCAAGGTCAGACAAGTGAGACACAGGGGGCTGAGGACTAGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS-3UTR CAA 90 bp | TTCTTATCCTGGGACCCTCTGTGGACTAGGACCACTCCCTGCATGAGACAGAAGCCCGTCTTCATGATTTaGCGGATATGGAAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLSWDPLWTRTTPCMRQKPVFMI*RIWKRA Trigger: GGCTCTCTTCCATATCCGCAAAATCATGAAGACGGG...CTTCTGTCTCATGCAGGGAGTGGTCCTAGTCCACAGAGGGTCCCAGGATAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS TCA 72 bp | GTTGTCGCAGGTGCCACCGCTGCCGGGACCTGGGGCTaGATCTCCCGGTGGCCTCGCGGGCCGAGGTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VVAGATAAGTWG*ISRWPRGPRCH Trigger: GTGGCACCTCGGCCCGCGAGGCCACCGGGAGATTCAGCCCCAGGTCCCGGCAGCGGTGGCACCTGCGACAAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 72 bp | CAGCCGTACTGCACGAGGGGCGAGAACTCGGCCAGCTaGGCCGCCGCCTCGCCCTGCGACGTGTGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QPYCTRGENSAS*AAASPCDVWPS Trigger: ACTGGGCCACACGTCGCAGGGCGAGGCGGCGGCGCAGCTGGCCGAGTTCTCGCCCCTCGTGCAGTACGGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 72 bp | CCGGTGGCCTCGCGGGCCGAGGTGCCACAGGGAGCATaGCCAGGCCCTTGTGGGGTTCTGTGGGGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVASRAEVPQGA*PGPCGVLWGLL Trigger: CAGCAGGCCCCACAGAACCCCACAAGGGCCTGGGCATGCTCCCTGTGGCACCTCGGCCCGCGAGGCCACCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 72 bp | TTTGTAGTGGCAGTGGGTACCCCGGCCATAGCCCCCTaGGGTTCGGCAGGCCTTGGCCCGGGCTCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FVVAVGTPAIAP*GSAGLGPGSAS Trigger: GCTGGCCGAGCCCGGGCCAAGGCCTGCCGAACCCCAGGGGGCTATGGCCGGGGTACCCACTGCCACTACAAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CAA 90 bp | GCTGTAGCGTTCTCGGGTGCCTCCATACAGAGTGCGTGCGGGTCGTaGCGCGTGGGGAGCCGGGCACAGTCGAGTGAGTCGGGCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVAFSGASIQSACGS*RVGSRAQSSESGQP Trigger: CGGCTGGCCCGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 72 bp | GTGCCTCCATACAGAGTGCGTGCGGGTCGTTGCGCGTaGGGAGCCGGGCACAGTCGAGTGAGTCGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPPYRVRAGRCA*GAGHSRVSRAS Trigger: GCTGGCCCGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CAA 72 bp | GCGGGCCGAGGTGCCACAGGGAGCATGCCCAGGCCCTaGTGGGGTTCTGTGGGGCCTGCTGTAGCGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGRGATGSMPRP*WGSVGPAVAFS Trigger: CGAGAACGCTACAGCAGGCCCCACAGAACCCCACAAGGGCCTGGGCATGCTCCCTGTGGCACCTCGGCCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 72 bp | AATTGCTCCATGATGGGGGCGCAGCGCAGGCGAGCCTaGTCGCACATGGGCCGGCAGGCTGGGATGGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NCSMMGAQRRRA*SHMGRQAGMGV Trigger: CACTCCCATCCCAGCCTGCCGGCCCATGTGCGAGCAGGCTCGCCTGCGCTGCGCCCCCATCATGGAGCAATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 72 bp | TCTCGGGTGCCTCCATACAGAGTGCGTGCGGGTCGTTaGGCGTGGGGAGCCGGGCACAGTCGAGTGAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVPPYRVRAGR*AWGAGHSRVSR Trigger: CCGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | GCTGTAGCGTTCTCGGGTGCCTCCATACAGAGTGCGTaGGGGTCGTTGCGCGTGGGGAGCCGGGCACAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AVAFSGASIQSA*GSLRVGSRAQS Trigger: CGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | GCCTGCTGTAGCGTTCTCGGGTGCCTCCATACAGAGTaGGTGCGGGTCGTTGCGCGTGGGGAGCCGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ACCSVLGCLHTE*VRVVARGEPGT Trigger: TGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS GCA 72 bp | ACTGGAACTTCTCGGGGTTGTCGCAGGTGCCACCGCTaGCGGGACCTGGGGCTGAATCTCCCGGTGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TGTSRGCRRCHR*RDLGLNLPVAS Trigger: CGAGGCCACCGGGAGATTCAGCCCCAGGTCCCGGCAGCGGTGGCACCTGCGACAACCCCGAGAAGTTCCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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| CDS CCA 72 bp | GTCCTTATCGCGCCGAGACCAGAACACCTCGACGCCTaGCCCGCAGCGCGGAGCGCACGAGCGACTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLIAPRPEHLDA*PAARSARATLL Trigger: GAGAAGAGTCGCTCGTGCGCTCCGCGCTGCGGGCCAGGCGTCGAGGTGTTCTGGTCTCGGCGCGATAAGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CCA 72 bp | GAGCATGAAGACAGCCACAGTGGGCACCGAGCCCCCTaGCAGCGAGCAGTCTCTCCGGCCTCCAGGCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: EHEDSHSGHRAP*QRAVSPASRHG Trigger: ACCGTGCCTGGAGGCCGGAGAGACTGCTCGCTGCCAGGGGGCTCGGTGCCCACTGTGGCTGTCTTCATGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CCA 72 bp | CTGGCAGCGAGCAGTCTCTCCGGCCTCCAGGCACGGTaGCAGCAGTACATGGTTGCTCTGTGGCCCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAASSLSGLQAR*QQYMVALWPEA Trigger: GGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTCGCTGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CAA 72 bp | TTCTCGGGTGCCTCCATACAGAGTGCGTGCGGGTCGTaGCGCGTGGGGAGCCGGGCACAGTCGAGTGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FSGASIQSACGS*RVGSRAQSSES Trigger: CGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | GTGGGGTTCTGTGGGGCCTGCTGTAGCGTTCTCGGGTaGCTCCATACAGAGTGCGTGCGGGTCGTTGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VGFCGACCSVLG*LHTECVRVVAR Trigger: ACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGCAGGCCCCACAGAACCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | TGGGGTTCGGCAGGCCTTGGCCCGGGCTCGGCCAGCTaGCATTTTTCGGTAGCACAGGCTCTGCCAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WGSAGLGPGSAS*HFSVAQALPSL Trigger: CAGACTTGGCAGAGCCTGTGCTACCGAAAAATGGCAGCTGGCCGAGCCCGGGCCAAGGCCTGCCGAACCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | CTCCGGCCTCCAGGCACGGTGGCAGCAGTACATGGTTaGTCTGTGGCCCGAAGCCGCCAGAAGTCCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRPPGTVAAVHG*SVARSRQKSML Trigger: CAACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CCA 72 bp | GTCTCTCCGGCCTCCAGGCACGGTGGCAGCAGTACATaGTTGCTCTGTGGCCCGAAGCCGCCAGAAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSPASRHGGSST*LLCGPKPPEVH Trigger: ATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CAA 90 bp | CGAGCAGTCTCTCCGGCCTCCAGGCACGGTGGCAGCAGTACATGGTaGCTCTGTGGCCCGAAGCCGCCAGAAGTCCATGTTGAGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAVSPASRHGGSSTW*LCGPKPPEVHVEAF Trigger: GAACGCCTCAACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGAGACTGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS TCA 72 bp | CGGGTCGTTGCGCGTGGGGAGCCGGGCACAGTCGAGTaGGTCGGGCCAGCCGAAATTGAATTGCTCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: RVVARGEPGTVE*VGPAEIELLHD Trigger: ATCATGGAGCAATTCAATTTCGGCTGGCCCGACTCACTCGACTGTGCCCGGCTCCCCACGCGCAACGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | CCCTGCCTCCTGGTCGCATGCCACACTCTGTGCACCTaGCACCGCTCTGATCAGGAAGGCCAAGGAGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PCLLVACHTLCT*HRSDQEGQGVD Trigger: GTCTACTCCTTGGCCTTCCTGATCAGAGCGGTGGCAGGTGCACAGAGTGTGGCATGCGACCAGGAGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS CAA 72 bp | TCTCCGGCCTCCAGGCACGGTGGCAGCAGTACATGGTaGCTCTGTGGCCCGAAGCCGCCAGAAGTCCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPASRHGGSSTW*LCGPKPPEVHV Trigger: AACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACCGTGCCTGGAGGCCGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS GCA 72 bp | GTTTTCCAGACCCTCCTGGATCACATACAGAGCCCCTaGCTCCTGGTCGCATGCCACACTCTGTGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFQTLLDHIQSP*LLVACHTLCTC Trigger: GCAGGTGCACAGAGTGTGGCATGCGACCAGGAGGCAGGGGCTCTGTATGTGATCCAGGAGGGTCTGGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS TCA 72 bp | GGTCGCATGCCACACTCTGTGCACCTGCCACCGCTCTaGTCAGGAAGGCCAAGGAGTAGACATTGTAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: GRMPHSVHLPPL*SGRPRSRHCST Trigger: TGTGCTACAATGTCTACTCCTTGGCCTTCCTGATCAGAGCGGTGGCAGGTGCACAGAGTGTGGCATGCGACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
||
| CDS TCA 72 bp | CCAGGTAGCAAGATAGGGGTACCAACACAAAGCCAGTaGGGGCTGCCGGGTCCATGCTGGCTACATAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGSKIGVPTQSQ*GLPGPCWLHSR Trigger: TCTGCTATGTAGCCAGCATGGACCCGGCAGCCCTCACTGGCTTTGTGTTGGTACCCCTATCTTGCTACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062572.3 |
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