Pregenerated sensors for FZD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036904Ensembl transcript IDs: ENSMUST00000041080.7
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTATCATGCTAATAGCAGTCAACACTGGGAAGGGGTGGGAACCCTaGCCGGTCTGGGGTCCCTTCGCCGCCCACGGGTTCTCCATCCCC | + |
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Preference number: 1 (lower is better) Translates to: IIMLIAVNTGKGWEP*PVWGPFAAHGFSIP Trigger: GGGGATGGAGAACCCGTGGGCGGCGAAGGGACCCCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTTGACTGCTATTAGCATGATAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 90 bp | TGGATACCATTAAGAGTTCATTATCATGCTAATAGCAGTCAACACTaGGAAGGGGTGGGAACCCTGGCCGGTCTGGGGTCCCTTCGCCGC | + |
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Preference number: 1 (lower is better) Translates to: WIPLRVHYHANSSQH*EGVGTLAGLGSLRR Trigger: GCGGCGAAGGGACCCCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTTGACTGCTATTAGCATGATAATGAACTCTTAATGGTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 90 bp | AAGGAAACCGCTTTAAATTGGGGGATTATGTGCAGAGACCACCTGTaGGGCATTCAGAGCCTTTTCTATAATGCACAGCCCAGGCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: KETALNWGIMCRDHL*GIQSLFYNAQPRPS Trigger: GCTAGGCCTGGGCTGTGCATTATAGAAAAGGCTCTGAATGCCCCACAGGTGGTCTCTGCACATAATCCCCCAATTTAAAGCGGTTTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 90 bp | GAGTTCATGGCCAGTTTATACACAGTCAGCATCCCACTTGTAGTGTaGGTTAGGTGGGAATGCATGATATGCCTAGGTCACAAACCAGTA | + |
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Preference number: 1 (lower is better) Translates to: EFMASLYTVSIPLVV*VRWECMICLGHKPV Trigger: TACTGGTTTGTGACCTAGGCATATCATGCATTCCCACCTAACCCACACTACAAGTGGGATGCTGACTGTGTATAAACTGGCCATGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 90 bp | CTAACCTCCACATTTCTGAGTGCAGCCAGCTCTGTAAAAGGCCAGTaGTTTCAAAATCACAGACTGAAGATACTCATTCACATAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LTSTFLSAASSVKGQ*FQNHRLKILIHIGL Trigger: CAGCCCTATGTGAATGAGTATCTTCAGTCTGTGATTTTGAAAGCACTGGCCTTTTACAGAGCTGGCTGCACTCAGAAATGTGGAGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 90 bp | AGAGCATTGTGGTTCAGTGCTAGTCCTGAACCACTGAGTCTCTGTTaGTTACAGCAGCAGGCAGCTTTTCCACTGAAAGTTTTTAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: RALWFSASPEPLSLC*LQQQAAFPLKVFRV Trigger: TACTCTAAAAACTTTCAGTGGAAAAGCTGCCTGCTGCTGTAACCAACAGAGACTCAGTGGTTCAGGACTAGCACTGAACCACAATGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 90 bp | TTATACACAGTCAGCATCCCACTTGTAGTGTGGGTTAGGTGGGAATaGATGATATGCCTAGGTCACAAACCAGTAATTATAAACTGCGGG | + |
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Preference number: 1 (lower is better) Translates to: LYTVSIPLVVWVRWE*MICLGHKPVIINCG Trigger: CCCGCAGTTTATAATTACTGGTTTGTGACCTAGGCATATCATGCATTCCCACCTAACCCACACTACAAGTGGGATGCTGACTGTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 90 bp | GCCAGTTTATACACAGTCAGCATCCCACTTGTAGTGTGGGTTAGGTaGGAATGCATGATATGCCTAGGTCACAAACCAGTAATTATAAAC | + |
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Preference number: 1 (lower is better) Translates to: ASLYTVSIPLVVWVR*ECMICLGHKPVIIN Trigger: GTTTATAATTACTGGTTTGTGACCTAGGCATATCATGCATTCCCACCTAACCCACACTACAAGTGGGATGCTGACTGTGTATAAACTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 90 bp | GCTATTAAGAAGTTAACCCATTCGTTTAATCTGTTAGCCAGCACCTaGTCTGCTACACCAGATTGTCAAGTGACTTACAGTATAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: AIKKLTHSFNLLAST*SATPDCQVTYSIEV Trigger: CACCTCTATACTGTAAGTCACTTGACAATCTGGTGTAGCAGAGCAGGTGCTGGCTAACAGATTAAACGAATGGGTTAACTTCTTAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGCTCCACATTTCTGAGTaGAGCCAGCTCTGTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRLHISE*SQLCKR Trigger: CCTTTTACAGAGCTGGCTGCACTCAGAAATGTGGAG...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCCCTCCCCTTCCACAATGCTGGACTCCAGTTATTAGCAGGGTAGCTGCCAGCAAGGAGAGACCATaGAAAACATCATTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVPPLPQCWTPVISRVAASKERP*KTSFLG Trigger: CCCCAAAAATGATGTTTTTCATGGTCTCTCCTTGCT...GGCAGCTACCCTGCTAATAACTGGAGTCCAGCATTGTGGAAGGGGAGGGACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTAACACTGGGAAGGGGTaGGAACCCTGGCCGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSNTGKG*EPWPVW Trigger: CCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTT...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCCCTCCCCTTCCACAATGCTGGACTCCAGTTATTAGCAGGGTAGCTGCCGAAAAGCAGCACACTTaGAATACACAAGCAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RVPPLPQCWTPVISRVAAEKQHT*NTQAGN Trigger: ATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTC...GGCAGCTACCCTGCTAATAACTGGAGTCCAGCATTGTGGAAGGGGAGGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTGTCTGGGGTAAGTGCTaGGGCATCAGAGAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSVWGKC*GIREEG Trigger: CCCCTCCTCTCTGATGCCCCAGCACTTACCCCAGAC...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCTAAGGGAGTCATTTAAGTCCCCGCTGCTAATGGATACCATTAAGAGTAATAGCAGTCAACACTaGGAAGGGGTGGGAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: FVLRESFKSPLLMDTIKSNSSQH*EGVGTL Trigger: CAGGGTTCCCACCCCTTCCCAGTGTTGACTGCTATT...ACTCTTAATGGTATCCATTAGCAGCGGGGACTTAAATGACTCCCTTAGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGACAGTTCAGGAGAGGTaGGGGACAGGGTGGTACTTA | + |
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Preference number: 2 (lower is better) Translates to: LAHSSADSTAFCSNKLASTVQER*GTGWYL Trigger: TAAGTACCACCCTGTCCCCCACCTCTCCTGAACTGT...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR GCA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTATCTGGGAGGCTTCAATaGCAGGTACTTTGTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: INQQLLALFHTCDKALSLSGRLQ*QVLCSK Trigger: CTTAGAACAAAGTACCTGGCATTGAAGCCTCCCAGA...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CAA 90 bp | GGTCACAAACCAGTAATTATAAACTGCGGGCAAGGTGCCCAATTCTaGAAGGTAAAATGGGCAAGACAACTAAAGCATATATTCACATTA | + |
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Preference number: 2 (lower is better) Translates to: GHKPVIINCGQGAQF*KVKWARQLKHIFTL Trigger: TAATGTGAATATATGCTTTAGTTGTCTTGCCCATTTTACCTTCAAGAATTGGGCACCTTGCCCGCAGTTTATAATTACTGGTTTGTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTAGGTGGGGGACAGGGTaGTACTTAAATCATTTATCA | + |
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Preference number: 2 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSRWGTG*YLNHLS Trigger: TGATAAATGATTTAAGTACCACCCTGTCCCCCACCT...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CAA 90 bp | CTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTAACTTaGACTTTATTTCTGAACACACAGAGTTCATGGCCAGTTTATACA | + |
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Preference number: 2 (lower is better) Translates to: LLALFHTCDKALSLT*TLFLNTQSSWPVYT Trigger: TGTATAAACTGGCCATGAACTCTGTGTGTTCAGAAATAAAGTCAAAGTTAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR GCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTTCTGTAAAAGGCCAGTaGTTTCAAAATCACAGACTG | + |
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Preference number: 2 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSSVKGQ*FQNHRL Trigger: CAGTCTGTGATTTTGAAAGCACTGGCCTTTTACAGA...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTTTAAGGCATCTGCCTaGTCATTAAGAATACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LAHSSADSTAFCSNKLASFKASA*SLRIPK Trigger: TTTGGGTATTCTTAATGACCAGGCAGATGCCTTAAA...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTTTCTTGAAGGTAAAATaGGCAAGACAACTAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSFLKVK*ARQLKH Trigger: ATGCTTTAGTTGTCTTGCCCATTTTACCTTCAAGAA...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | GTCAACACTGGGAAGGGGTGGGAACCCTGGCCGGTCTaGGGTCCCTTCGCCGCCCACGGGTTCTCCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: VNTGKGWEPWPV*GPFAAHGFSIP Trigger: GGGGATGGAGAACCCGTGGGCGGCGAAGGGACCCCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTTGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | CTAATAGCAGTCAACACTGGGAAGGGGTGGGAACCCTaGCCGGTCTGGGGTCCCTTCGCCGCCCACGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: LIAVNTGKGWEP*PVWGPFAAHGF Trigger: GAACCCGTGGGCGGCGAAGGGACCCCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTTGACTGCTATTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | TTAAGAGTTCATTATCATGCTAATAGCAGTCAACACTaGGAAGGGGTGGGAACCCTGGCCGGTCTGGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LRVHYHANSSQH*EGVGTLAGLGS Trigger: GGACCCCAGACCGGCCAGGGTTCCCACCCCTTCCCAGTGTTGACTGCTATTAGCATGATAATGAACTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CAA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTACTCCACGGTGGCCAATaGCTCCGCACCAAGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: INQQLLALFHTCDKALSLLHGGQ*LRTKRS Trigger: GCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAG...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | GCTTTAAATTGGGGGATTATGTGCAGAGACCACCTGTaGGGCATTCAGAGCCTTTTCTATAATGCACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: ALNWGIMCRDHL*GIQSLFYNAQP Trigger: GGGCTGTGCATTATAGAAAAGGCTCTGAATGCCCCACAGGTGGTCTCTGCACATAATCCCCCAATTTAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | TGGTTCAGTGCTAGTCCTGAACCACTGAGTCTCTGTTaGTTACAGCAGCAGGCAGCTTTTCCACTGAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: WFSASPEPLSLC*LQQQAAFPLKV Trigger: AACTTTCAGTGGAAAAGCTGCCTGCTGCTGTAACCAACAGAGACTCAGTGGTTCAGGACTAGCACTGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | TACACAGTCAGCATCCCACTTGTAGTGTGGGTTAGGTaGGAATGCATGATATGCCTAGGTCACAAACCAGTA | + |
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Preference number: 3 (lower is better) Translates to: YTVSIPLVVWVR*ECMICLGHKPV Trigger: TACTGGTTTGTGACCTAGGCATATCATGCATTCCCACCTAACCCACACTACAAGTGGGATGCTGACTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 72 bp | CCTGTGGCCTTAAATACTAACCTCCACATTTCTGAGTaGAGCCAGCTCTGTAAAAGGCCAGTGCTTTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PVALNTNLHISE*SQLCKRPVLSK Trigger: TTTTGAAAGCACTGGCCTTTTACAGAGCTGGCTGCACTCAGAAATGTGGAGGTTAGTATTTAAGGCCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR CCA 72 bp | TCCTCAGCAAGCATAAGGGGAACAGTTCAGGAGAGGTaGGGGACAGGGTGGTACTTAAATCATTTATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SSASIRGTVQER*GTGWYLNHLSK Trigger: TTTTGATAAATGATTTAAGTACCACCCTGTCCCCCACCTCTCCTGAACTGTTCCCCTTATGCTTGCTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 72 bp | GTCAGCATCCCACTTGTAGTGTGGGTTAGGTGGGAATaGATGATATGCCTAGGTCACAAACCAGTAATTATA | + |
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Preference number: 3 (lower is better) Translates to: VSIPLVVWVRWE*MICLGHKPVII Trigger: TATAATTACTGGTTTGTGACCTAGGCATATCATGCATTCCCACCTAACCCACACTACAAGTGGGATGCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 72 bp | ACATTTCTGAGTGCAGCCAGCTCTGTAAAAGGCCAGTaGTTTCAAAATCACAGACTGAAGATACTCATTCAC | + |
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Preference number: 3 (lower is better) Translates to: TFLSAASSVKGQ*FQNHRLKILIH Trigger: GTGAATGAGTATCTTCAGTCTGTGATTTTGAAAGCACTGGCCTTTTACAGAGCTGGCTGCACTCAGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CAA 90 bp | GCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTCTGGAAAAGCAGCACACTaGGAATACACAAGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: AHSSADSTAFCSNKLASSGKAAH*EYTSRE Trigger: TTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCC...AGACGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR GCA 72 bp | ATGATATGCCTAGGTCACAAACCAGTAATTATAAACTaGGGGCAAGGTGCCCAATTCTTGAAGGTAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: MICLGHKPVIIN*GQGAQFLKVKW Trigger: CCATTTTACCTTCAAGAATTGGGCACCTTGCCCGCAGTTTATAATTACTGGTTTGTGACCTAGGCATATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CAA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTACTCTGCTACACCAGATaGTCAAGTGACTTACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: INQQLLALFHTCDKALSLLCYTR*SSDLQY Trigger: ATACTGTAAGTCACTTGACAATCTGGTGTAGCAGAG...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CAA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTAGAAACCCGTATTTACTaGGGGTGTATAATTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: INQQLLALFHTCDKALSLETRIY*GCIIKT Trigger: TGTCTTAATTATACACCCCAAGTAAATACGGGTTTC...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR-3UTR CAA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTGCCCTGTCTCTAACTTaGACTTTATTTCTGAACACA | + |
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Preference number: 3 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSALSLT*TLFLNT Trigger: TGTGTTCAGAAATAAAGTCAAAGTTAGAGACAGGGC...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| 3UTR TCA 72 bp | TACCCATACAATCAACTGTGGGTCTCATTTGGGTGTTaGCAACTTTTGACTTACATTTTAGTTTCTAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: YPYNQLWVSFGC*QLLTYILVSKA Trigger: AGCTTTAGAAACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTGTATGGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGATGGGCAGTTGTGCGTaGCCTCCCAGCGCGGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRMGSCA*PPSAVG Trigger: ACCGACCGCGCTGGGAGGCCACGCACAACTGCCCAT...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGCGATCCAGAAGACGGTaGAGGCGCGCTCATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRRSRRR*RRAHPG Trigger: GCCAGGATGAGCGCGCCTTCACCGTCTTCTGGATCG...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGGGCACCGTGATCTCTTaGCACGCCAGCTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRGTVIS*HASSLA Trigger: GGCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCC...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR TCA 90 bp | AGGGTCCCTCCCCTTCCACAATGCTGGACTCCAGTTATTAGCAGGGTAGCTGCCCCCACACGCCCGATGTaGTGCCCACTACTAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: RVPPLPQCWTPVISRVAAPTRPM*CPLLGT Trigger: TGTGCCTAGTAGTGGGCATCACATCGGGCGTGTGGG...GGCAGCTACCCTGCTAATAACTGGAGTCCAGCATTGTGGAAGGGGAGGGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | AGGGTCCCTCCCCTTCCACAATGCTGGACTCCAGTTATTAGCAGGGTAGCTGCCACAGCGCGGGGCCAGTaGTTTCATAGCGAACATGCT | + |
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Preference number: 4 (lower is better) Translates to: RVPPLPQCWTPVISRVAATARGQ*FHSEHA Trigger: AGCATGTTCGCTATGAAACCACTGGCCCCGCGCTGT...GGCAGCTACCCTGCTAATAACTGGAGTCCAGCATTGTGGAAGGGGAGGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTGGCACGCCAGCTCCTTaGCCGAAGCCGCGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSGTPAP*PKPRQR Trigger: GCGCTGCCGCGGCTTCGGCCAAGGAGCTGGCGTGCC...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | AGGGTCCCTCCCCTTCCACAATGCTGGACTCCAGTTATTAGCAGGGTAGCTGCCAGTCCTCCAGGCAGATaGGCGTGTACATGCTACACA | + |
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Preference number: 4 (lower is better) Translates to: RVPPLPQCWTPVISRVAASPPGR*ACTCYT Trigger: TGTGTAGCATGTACACGCCCATCTGCCTGGAGGACT...GGCAGCTACCCTGCTAATAACTGGAGTCCAGCATTGTGGAAGGGGAGGGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTATGGGCGCGCGGCACTaGCACCCCGGCTCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSMGARH*HPGSQG Trigger: TCCCTGCGAGCCGGGGTGCCAGTGCCGCGCGCCCAT...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTCGCCGTCTACGGAGCTaGGCGCCAGCACCGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSRRLRS*APAPRW Trigger: CCATCGCGGTGCTGGCGCTCAGCTCCGTAGACGGCG...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| 3UTR CAA 72 bp | CAGGAGGGTTCCAACTATCCTAACCCACTGAAACCATaGTCTGGGGTAAGTGCTGGGGCATCAGAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEGSNYPNPLKP*SGVSAGASERR Trigger: CCTCCTCTCTGATGCCCCAGCACTTACCCCAGACAATGGTTTCAGTGGGTTAGGATAGTTGGAACCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTGGAGAAAGACCACCGTaGACAGCGCGGGGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSGERPP*TARGQW Trigger: CCACTGGCCCCGCGCTGTGCACGGTGGTCTTTCTCC...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | GCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTCTAGCGCCCGCGCCTACTaGAGCGCCCTTGCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSSADSTAFCSNKLASSSARAY*SALAGP Trigger: TGGGCCAGCAAGGGCGCTGCAGTAGGCGCGGGCGCT...AGACGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTAAGGGAGTCATTTAAGTCCCCGCTGCTAATGGATACCATTAAGAGTTGGACACGCTCACCATaGGCGCGCGGCACTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FVLRESFKSPLLMDTIKSWTRSP*ARGTGT Trigger: GGTGCCAGTGCCGCGCGCCCATGGTGAGCGTGTCCA...ACTCTTAATGGTATCCATTAGCAGCGGGGACTTAAATGACTCCCTTAGAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTAAGGGAGTCATTTAAGTCCCCGCTGCTAATGGATACCATTAAGAGTTCGGGCCTGCGAGCCTaGTCCGGTTGCAGGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLRESFKSPLLMDTIKSSGLRA*SGCRSR Trigger: TCGGGACCTGCAACCGGACCAGGCTCGCAGGCCCGA...ACTCTTAATGGTATCCATTAGCAGCGGGGACTTAAATGACTCCCTTAGAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTAAGGGAGTCATTTAAGTCCCCGCTGCTAATGGATACCATTAAGAGTCGATCTGGCCGGTCTTaGCGCGGTTGTAGAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVLRESFKSPLLMDTIKSRSGRS*RGCRAG Trigger: ACCCGCTCTACAACCGCGTCAAGACCGGCCAGATCG...ACTCTTAATGGTATCCATTAGCAGCGGGGACTTAAATGACTCCCTTAGAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGAGGCATGGGCAGTTGTaGGTGGCCTCCCAGCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAHSSADSTAFCSNKLASRHGQL*VASQRG Trigger: ACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCT...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTAAGGGAGTCATTTAAGTCCCCGCTGCTAATGGATACCATTAAGAGTCAAGCAAAGCCGTACTaGCGCATGAGCGGCGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVLRESFKSPLLMDTIKSQAKPY*RMSGAQ Trigger: CTGCGCGCCGCTCATGCGCCAGTACGGCTTTGCTTG...ACTCTTAATGGTATCCATTAGCAGCGGGGACTTAAATGACTCCCTTAGAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTGCGGGTGGCGTTCGCTaGACACGCTCACCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSAGGVR*TRSPWA Trigger: CGCCCATGGTGAGCGTGTCCAGCGAACGCCACCCGC...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTGCACCGCGATGGACTTaGCGCTGGGCACAAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSAPRWT*RWAQAT Trigger: CGTGGCTTGTGCCCAGCGTCAAGTCCATCGCGGTGC...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGCAGGTCCCGAAGGCATaGGCAGTTGTGCGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSSADSTAFCSNKLASQVPKA*AVVRGL Trigger: GAGGCCACGCACAACTGCCCATGCCTTCGGGACCTG...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | GCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTCTACGTCAGGCCGGTACTaGCGTCGCTGTAGAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AHSSADSTAFCSNKLASSTSGRY*RRCRGI Trigger: GATCCCTCTACAGCGACGTCAGTACCGGCCTGACGT...AGACGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAAAAGCAGCACACTTGGAATACACAAGCAGGGAATGCTATTAAGAAGTAACATGCTGCTCGACTaGACCCAGCTCCTCGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKSSTLGIHKQGMLLRSNMLLD*TQLLVL Trigger: GAGTACGAGGAGCTGGGTGCAGTCGAGCAGCATGTT...ACTTCTTAATAGCATTCCCTGCTTGTGTATTCCAAGTGTGCTGCTTTTCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGAGGACTCCAGAGTCTTaGCGGACCAGACCCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSSADSTAFCSNKLASRTPES*RTRPTR Trigger: GCGTGTGGGTCTGGTCCGGCAAGACTCTGGAGTCCT...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTATACAGAGCTGGCCGTaGCAGACCGCCACGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSIQSWP*QTATSG Trigger: GCCTGACGTGGCGGTCTGGCACGGCCAGCTCTGTAT...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGGCACAGTTGGCGATCTaGCCGGTCTTGACGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAHSSADSTAFCSNKLASAQLAI*PVLTRL Trigger: CAACCGCGTCAAGACCGGCCAGATCGCCAACTGTGC...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTCCGTGTAGAGCACGGTaGAGAGGCCCAAGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSPCRAR*RGPSGS Trigger: TGATCCGCTTGGGCCTCTTCACCGTGCTCTACACGG...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTACCGATCGCAGCGCATaGGGTCAGGCCAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSTDRSA*GQAKQS Trigger: GCTTTGCTTGGCCTGACCGCATGCGCTGCGATCGGT...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| 3UTR CAA 72 bp | GTAATGCAATTGTCCAGCAAAGGAAACCGCTTTAAATaGGGGGATTATGTGCAGAGACCACCTGTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VMQLSSKGNRFK*GDYVQRPPVGH Trigger: ATGCCCCACAGGTGGTCTCTGCACATAATCCCCCAATTTAAAGCGGTTTCCTTTGCTGGACAATTGCATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| 3UTR CAA 72 bp | GTTAGAGTGGTATCTGCGCAGCCACCCTGCCGTTGTTaGTTTAATGCACATGGCTTCTTCTTTCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVVSAQPPCRC*FNAHGFFFRFP Trigger: AGGAAAACGAAAGAAGAAGCCATGTGCATTAAACAAACAACGGCAGGGTGGCTGCGCAGATACCACTCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR GCA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTGCGGTTGTAGTCCATaGACAGAGTGTCCGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSSADSTAFCSNKLASCGCSP*TECPGC Trigger: GCAACCCGGACACTCTGTGCATGGACTACAACCGCA...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | GCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGTCTCTAAAGAAGGGGTTGTaGCAGGGCAGCGCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHSSADSTAFCSNKLASSLKKGL*QGSAQL Trigger: CAACTGTGCGCTGCCCTGCCACAACCCCTTCTTTAG...AGACGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTAAGGCGCGCTCATCCTaGCTAAAGAAGGGGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSKARSS*LKKGLW Trigger: CCACAACCCCTTCTTTAGCCAGGATGAGCGCGCCTT...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR TCA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTAGGCCCAAGCGGATCATaGGTTTTTCTAGCTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: INQQLLALFHTCDKALSLGPSGS*VFLACV Trigger: CACACAAGCTAGAAAAACTCATGATCCGCTTGGGCC...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CCA 90 bp | CAATCAACTGTGGGTCTCATTTGGGTGTTGACAACTTTTGACTTACATTTTAGTTCAGACCTGGGACAATaGCATTTGCTTAGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVGLIWVLTTFDLHFSSDLGQ*HLLRVR Trigger: TCTTACCCTAAGCAAATGCCATTGTCCCAGGTCTGA...ACTAAAATGTAAGTCAAAAGTTGTCAACACCCAAATGAGACCCACAGTTGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| 3UTR CAA 72 bp | TATTTACCTCAATCCTCTGGACATATAACAACCACATaGCCTACCCTCAAATATTTGATGAGTCTTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: YLPQSSGHITTT*PTLKYLMSLNI Trigger: AATGTTAAGACTCATCAAATATTTGAGGGTAGGCAATGTGGTTGTTATATGTCCAGAGGATTGAGGTAAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | CTGCTGCCGCCACGATGTGGGGGCCTGGCCCCTGGCGGGCGGCTGTaGCCGCTGCCAGAGGGCGGCTGCTCGCCGGGAGGAGGCGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPPRCGGLAPGGRL*PLPEGGCSPGGGGG Trigger: TCCGCCGCCTCCTCCCGGCGAGCAGCCGCCCTCTGGCAGCGGCCACAGCCGCCCGCCAGGGGCCAGGCCCCCACATCGTGGCGGCAGCAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | GGGCGGCTGCTCGCCGGGAGGAGGCGGCGGAGGCAGGCGGCGCGGTaGGCTGGGCGCGGCCGTGGTGAGGTCGGTGCGGTTGTAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRLLAGRRRRRQAAR*AGRGRGEVGAVVVH Trigger: ATGGACTACAACCGCACCGACCTCACCACGGCCGCGCCCAGCCCACCGCGCCGCCTGCCTCCGCCGCCTCCTCCCGGCGAGCAGCCGCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | AGCGGGTGGCGTTCGCTGGACACGCTCACCATGGGCGCGCGGCACTaGCACCCCGGCTCGCAGGGAGCAGCGCCGCCACCAGGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGWRSLDTLTMGARH*HPGSQGAAPPPGGL Trigger: GAGGCCCCCTGGTGGCGGCGCTGCTCCCTGCGAGCCGGGGTGCCAGTGCCGCGCGCCCATGGTGAGCGTGTCCAGCGAACGCCACCCGCT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS GCA 90 bp | GCACAGCGCGGGGCCAGTGGTTTCATAGCGAACATGCTGCTCGACTaGACCCAGCTCCTCGTACTCGCCGCGCGCGCCCGGGCTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQRGASGFIANMLLD*TQLLVLAARARAAR Trigger: GCGAGCAGCCCGGGCGCGCGCGGCGAGTACGAGGAGCTGGGTGCAGTCGAGCAGCATGTTCGCTATGAAACCACTGGCCCCGCGCTGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS TCA 90 bp | AAGATACAGAGCTGGCCGTGCCAGACCGCCACGTCAGGCCGGTACTaGCGTCGCTGTAGAGGGATCCCCCGCCTCCGCCGTGTCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KIQSWPCQTATSGRY*RRCRGIPRLRRVPH Trigger: GTGGGGGACACGGCGGAGGCGGGGGATCCCTCTACAGCGACGTCAGTACCGGCCTGACGTGGCGGTCTGGCACGGCCAGCTCTGTATCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | GTAATCGGGCCTGCGAGCCTGGTCCGGTTGCAGGTCCCGAAGGCATaGGCAGTTGTGCGTGGCCTCCCAGCGCGGTCGGTTGTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIGPASLVRLQVPKA*AVVRGLPARSVVLL Trigger: GAGCAGCACAACCGACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGGACCAGGCTCGCAGGCCCGATTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | GAGCCTGGTCCGGTTGCAGGTCCCGAAGGCATGGGCAGTTGTGCGTaGCCTCCCAGCGCGGTCGGTTGTGCTGCTCATAGAAAAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPGPVAGPEGMGSCA*PPSAVGCAAHRKGR Trigger: CCTGCCTTTTCTATGAGCAGCACAACCGACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGGACCAGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | CAGAAGACGGTGAAGGCGCGCTCATCCTGGCTAAAGAAGGGGTTGTaGCAGGGCAGCGCACAGTTGGCGATCTGGCCGGTCTTGACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QKTVKARSSWLKKGL*QGSAQLAIWPVLTR Trigger: CCGCGTCAAGACCGGCCAGATCGCCAACTGTGCGCTGCCCTGCCACAACCCCTTCTTTAGCCAGGATGAGCGCGCCTTCACCGTCTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGAGCACCGCGATGGACTaGACGCTGGGCACAAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRSTAMD*TLGTSH Trigger: GTGGCTTGTGCCCAGCGTCAAGTCCATCGCGGTGCT...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | GTTAAGGCTCCACGGTGGCCAATTGCTCCGCACCAAGAGGAGCCAGGCAGCAGGCAGGACTCCAGAGTCTaGCCGGACCAGACCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: VKAPRWPIAPHQEEPGSRQDSRV*PDQTHT Trigger: CGTGTGGGTCTGGTCCGGCAAGACTCTGGAGTCCTG...CCTGCTGCCTGGCTCCTCTTGGTGCGGAGCAATTGGCCACCGTGGAGCCTTAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS TCA 90 bp | GCATGTAAGTGTAGTTGTAACCGATGCCTTTGCACAACGGCACCGTaGTCTCTTGGCACGCCAGCTCCTTGGCCGAAGCCGCGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACKCSCNRCLCTTAP*SLGTPAPWPKPRQR Trigger: GCGCTGCCGCGGCTTCGGCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCCGTTGTGCAAAGGCATCGGTTACAACTACACTTACATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS CCA 90 bp | AAAAGTAGACAAGGAGAAAGACCACCGTGCACAGCGCGGGGCCAGTaGTTTCATAGCGAACATGCTGCTCGACTGCACCCAGCTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KSRQGERPPCTARGQ*FHSEHAARLHPAPR Trigger: ACGAGGAGCTGGGTGCAGTCGAGCAGCATGTTCGCTATGAAACCACTGGCCCCGCGCTGTGCACGGTGGTCTTTCTCCTTGTCTACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGCGAAGGCATGGGCAGTaGTGCGTGGCCTCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LAHSSADSTAFCSNKLASRRHGQ*CVASQR Trigger: GCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCG...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGCGGCACCGTGATCTCTaGGCACGCCAGCTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAHSSADSTAFCSNKLASRHRDL*ARQLLG Trigger: GCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCCG...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTACAGGGCAGCGCACAGTaGGCGATCTGGCCGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: INQQLLALFHTCDKALSLQGSAQ*AIWPVL Trigger: CAAGACCGGCCAGATCGCCAACTGTGCGCTGCCCTG...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGCCTACTGCAGCGCCCTaGCTGGCCCAGCAGCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: LAHSSADSTAFCSNKLASPTAAP*LAQQHL Trigger: TAGGTGCTGCTGGGCCAGCAAGGGCGCTGCAGTAGG...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | ATAAACCAGCAACTTTTAGCTCTTTTCCACACATGTGATAAAGCCCTGTCTCTATGGCTAAAGAAGGGGTaGTGGCAGGGCAGCGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: INQQLLALFHTCDKALSLWLKKG*WQGSAQ Trigger: CTGTGCGCTGCCCTGCCACAACCCCTTCTTTAGCCA...TAGAGACAGGGCTTTATCACATGTGTGGAAAAGAGCTAAAAGTTGCTGGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
||
| CDS-3UTR CAA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGACAAAGCCGCGTAGGTaGTCAAGGCTCTGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LAHSSADSTAFCSNKLASTKPRR*SRLWLP Trigger: GGGCAACCAGAGCCTTGACAACCTACGCGGCTTTGT...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS-3UTR CAA 90 bp | CTAGCACATTCTTCTGCTGATTCAACAGCCTTCTGTTCAAATAAATTAGCTTCGCTGGGACAATGGCATTaGCTTAGGGTAAGATACAGA | + |
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Preference number: 5 (lower is better) Translates to: LAHSSADSTAFCSNKLASLGQWH*LRVRYR Trigger: TCTGTATCTTACCCTAAGCAAATGCCATTGTCCCAG...CGAAGCTAATTTATTTGAACAGAAGGCTGTTGAATCAGCAGAAGAATGTGCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | CCACGATGTGGGGGCCTGGCCCCTGGCGGGCGGCTGTaGCCGCTGCCAGAGGGCGGCTGCTCGCCGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PRCGGLAPGGRL*PLPEGGCSPGG Trigger: TCCTCCCGGCGAGCAGCCGCCCTCTGGCAGCGGCCACAGCCGCCCGCCAGGGGCCAGGCCCCCACATCGTGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | CGTTCGCTGGACACGCTCACCATGGGCGCGCGGCACTaGCACCCCGGCTCGCAGGGAGCAGCGCCGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RSLDTLTMGARH*HPGSQGAAPPP Trigger: TGGTGGCGGCGCTGCTCCCTGCGAGCCGGGGTGCCAGTGCCGCGCGCCCATGGTGAGCGTGTCCAGCGAACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 90 bp | CCCCCAGGGCCGCTGCCTCCAGCGCCCGCGCCTACTGCAGCGCCCTaGCTGGCCCAGCAGCACCTAGTGCACAACGCGCGCCAGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: PPGPLPPAPAPTAAP*LAQQHLVHNARQDS Trigger: GGAGTCCTGGCGCGCGTTGTGCACTAGGTGCTGCTGGGCCAGCAAGGGCGCTGCAGTAGGCGCGGGCGCTGGAGGCAGCGGCCCTGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | CCGCTGCCTCCAGCGCCCGCGCCTACTGCAGCGCCCTaGCTGGCCCAGCAGCACCTAGTGCACAACGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PLPPAPAPTAAP*LAQQHLVHNAR Trigger: GCGCGCGTTGTGCACTAGGTGCTGCTGGGCCAGCAAGGGCGCTGCAGTAGGCGCGGGCGCTGGAGGCAGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | TGTAGAGCGGGTGGCGTTCGCTGGACACGCTCACCATaGGCGCGCGGCACTGGCACCCCGGCTCGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CRAGGVRWTRSP*ARGTGTPARRE Trigger: CTCCCTGCGAGCCGGGGTGCCAGTGCCGCGCGCCCATGGTGAGCGTGTCCAGCGAACGCCACCCGCTCTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS TCA 72 bp | AGCTGGCCGTGCCAGACCGCCACGTCAGGCCGGTACTaGCGTCGCTGTAGAGGGATCCCCCGCCTCCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SWPCQTATSGRY*RRCRGIPRLRR Trigger: ACGGCGGAGGCGGGGGATCCCTCTACAGCGACGTCAGTACCGGCCTGACGTGGCGGTCTGGCACGGCCAGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | CCTGCGAGCCTGGTCCGGTTGCAGGTCCCGAAGGCATaGGCAGTTGTGCGTGGCCTCCCAGCGCGGTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: PASLVRLQVPKA*AVVRGLPARSV Trigger: AACCGACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGGACCAGGCTCGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | GCCTGGTCCGGTTGCAGGTCCCGAAGGCATGGGCAGTaGTGCGTGGCCTCCCAGCGCGGTCGGTTGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWSGCRSRRHGQ*CVASQRGRLCC Trigger: GCAGCACAACCGACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGGACCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS GCA 72 bp | GGGGCCAGTGGTTTCATAGCGAACATGCTGCTCGACTaGACCCAGCTCCTCGTACTCGCCGCGCGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GASGFIANMLLD*TQLLVLAARAR Trigger: CCGGGCGCGCGCGGCGAGTACGAGGAGCTGGGTGCAGTCGAGCAGCATGTTCGCTATGAAACCACTGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | CACAACGGCACCGTGATCTCTTGGCACGCCAGCTCCTaGGCCGAAGCCGCGGCAGCGCCGCTAGAGCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HNGTVISWHASS*AEAAAAPLERC Trigger: ACAGCGCTCTAGCGGCGCTGCCGCGGCTTCGGCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCCGTTGTG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 90 bp | ATGCCTTTGCACAACGGCACCGTGATCTCTTGGCACGCCAGCTCCTaGGCCGAAGCCGCGGCAGCGCCGCTAGAGCGCTGTAGCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: MPLHNGTVISWHASS*AEAAAAPLERCSTA Trigger: GGCGGTGCTACAGCGCTCTAGCGGCGCTGCCGCGGCTTCGGCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCCGTTGTGCAAAGGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | GAAGACCGCGTAATCGGGCCTGCGAGCCTGGTCCGGTaGCAGGTCCCGAAGGCATGGGCAGTTGTGCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: EDRVIGPASLVR*QVPKAWAVVRG Trigger: GCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGGACCAGGCTCGCAGGCCCGATTACGCGGTCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS GCA 72 bp | CGGTGCGGTTGTAGTCCATGCACAGAGTGTCCGGGTTaGCCTGCTCCGGCAACCGATCGCAGCGCATGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RCGCSPCTECPG*PAPATDRSACG Trigger: ACCGCATGCGCTGCGATCGGTTGCCGGAGCAGGGCAACCCGGACACTCTGTGCATGGACTACAACCGCACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | CCGGTTGCAGGTCCCGAAGGCATGGGCAGTTGTGCGTaGCCTCCCAGCGCGGTCGGTTGTGCTGCTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: PVAGPEGMGSCA*PPSAVGCAAHR Trigger: TCTATGAGCAGCACAACCGACCGCGCTGGGAGGCCACGCACAACTGCCCATGCCTTCGGGACCTGCAACCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | GTGAAGGCGCGCTCATCCTGGCTAAAGAAGGGGTTGTaGCAGGGCAGCGCACAGTTGGCGATCTGGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VKARSSWLKKGL*QGSAQLAIWPV Trigger: GACCGGCCAGATCGCCAACTGTGCGCTGCCCTGCCACAACCCCTTCTTTAGCCAGGATGAGCGCGCCTTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | ACGGTGAAGGCGCGCTCATCCTGGCTAAAGAAGGGGTaGTGGCAGGGCAGCGCACAGTTGGCGATCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TVKARSSWLKKG*WQGSAQLAIWP Trigger: CGGCCAGATCGCCAACTGTGCGCTGCCCTGCCACAACCCCTTCTTTAGCCAGGATGAGCGCGCCTTCACCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 90 bp | ATCCAGAAGACGGTGAAGGCGCGCTCATCCTGGCTAAAGAAGGGGTaGTGGCAGGGCAGCGCACAGTTGGCGATCTGGCCGGTCTTGACG | + |
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Preference number: 6 (lower is better) Translates to: IQKTVKARSSWLKKG*WQGSAQLAIWPVLT Trigger: CGTCAAGACCGGCCAGATCGCCAACTGTGCGCTGCCCTGCCACAACCCCTTCTTTAGCCAGGATGAGCGCGCCTTCACCGTCTTCTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CCA 72 bp | CAAGGAGAAAGACCACCGTGCACAGCGCGGGGCCAGTaGTTTCATAGCGAACATGCTGCTCGACTGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: QGERPPCTARGQ*FHSEHAARLHP Trigger: TGGGTGCAGTCGAGCAGCATGTTCGCTATGAAACCACTGGCCCCGCGCTGTGCACGGTGGTCTTTCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS TCA 72 bp | TGTAGTTGTAACCGATGCCTTTGCACAACGGCACCGTaGTCTCTTGGCACGCCAGCTCCTTGGCCGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: CSCNRCLCTTAP*SLGTPAPWPKP Trigger: CGGCTTCGGCCAAGGAGCTGGCGTGCCAAGAGATCACGGTGCCGTTGTGCAAAGGCATCGGTTACAACTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | TCTAGCTTGTGTGTCTTAGTTGGGCCTCCTTGCTGCTaGATGACTGAACGGATTCGGAACAGCGACACGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSLCVLVGPPCC*MTERIRNSDTK Trigger: CTTCGTGTCGCTGTTCCGAATCCGTTCAGTCATCAAGCAGCAAGGAGGCCCAACTAAGACACACAAGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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| CDS CAA 72 bp | GTGAAGAGGCCCAAGCGGATCATGAGTTTTTCTAGCTaGTGTGTCTTAGTTGGGCCTCCTTGCTGCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: VKRPKRIMSFSS*CVLVGPPCCLM Trigger: CATCAAGCAGCAAGGAGGCCCAACTAAGACACACAAGCTAGAAAAACTCATGATCCGCTTGGGCCTCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041080.7 |
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