Pregenerated sensors for FZD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041075Ensembl transcript IDs: ENSMUST00000114246.4
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGCAGGGGATTGGACTCACAGCCCTGGCTCATCTCTGGCGCCTaGAAACCTCACCAGTCTCTCTCTCTGCTGGTCTCAACCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CSRGLDSQPWLISGA*KPHQSLSLLVSTFP Trigger: GGGAAAGGTTGAGACCAGCAGAGAGAGAGACTGGTGAGGTTTTCAGGCGCCAGAGATGAGCCAGGGCTGTGAGTCCAATCCCCTGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 90 bp | CTTGCCTTGCAGCAGGGGATTGGACTCACAGCCCTGGCTCATCTCTaGCGCCTGAAAACCTCACCAGTCTCTCTCTCTGCTGGTCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LALQQGIGLTALAHL*RLKTSPVSLSAGLN Trigger: GTTGAGACCAGCAGAGAGAGAGACTGGTGAGGTTTTCAGGCGCCAGAGATGAGCCAGGGCTGTGAGTCCAATCCCCTGCTGCAAGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 90 bp | TCTTCTCACCTCCAAATAACTTCTCACTTCCAGGTTAAAGCTCAGTaGAGGGGGCAGGTAGCTTACGGAAACAAGCCCCCACCCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SSHLQITSHFQVKAQ*RGQVAYGNKPPPSS Trigger: ACTGCTGGGTGGGGGCTTGTTTCCGTAAGCTACCTGCCCCCTCCACTGAGCTTTAACCTGGAAGTGAGAAGTTATTTGGAGGTGAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACAGGTTTGACCACCACTTaGCAAGGGCACCGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SVKGRVKVNSHDALLSFTGLTTT*QGHRRR Trigger: CCTCCTGCGGTGCCCTTGTCAAGTGGTGGTCAAACC...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACACTTGCAGCAGGGGATTaGACTCACAGCCCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SVKGRVKVNSHDALLSFTLAAGD*THSPGS Trigger: TGAGCCAGGGCTGTGAGTCCAATCCCCTGCTGCAAG...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CCA 90 bp | ATCATTCCTCTTGCCCTCGCCTCATGCAACCAGAGAGAGAAAGGGTCAGCTCATTATGGGGGCGTAGAATaGGAGGAGATTTCATTAAGC | + |
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Preference number: 2 (lower is better) Translates to: IIPLALASCNQREKGSAHYGGVE*EEISLS Trigger: GCTTAATGAAATCTCCTCCCATTCTACGCCCCCATA...ATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CAA 90 bp | TCAACCAAATTAACAACCAAAGGAAAACCTCGGATTTCTGTGGCTTaGCCTGTAAAAGCTGCTGGCTTCACAGTTAGGCCTTTCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: STKLTTKGKPRISVA*PVKAAGFTVRPFLR Trigger: CCTGAGGAAAGGCCTAACTGTGAAGCCAGCAGCTTTTACAGGCAAAGCCACAGAAATCCGAGGTTTTCCTTTGGTTGTTAATTTGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CCA 90 bp | ATCATTCCTCTTGCCCTCGCCTCATGCAACCAGAGAGAGAAAGGGTCAGCTCATAGTGAAAAGAGATTATaGTTTGACCACCACTTGACA | + |
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Preference number: 2 (lower is better) Translates to: IIPLALASCNQREKGSAHSEKRL*FDHHLT Trigger: TGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACT...ATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CCA 90 bp | CACTTTGAAGTTCACCTTCCCTTAATGACTTTCTTGAAACCTGACTCAAACTCTAAGGGGAGCCAGGCCTaGTGGACCATGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: HFEVHLPLMTFLKPDSNSKGSQA*WTMPLI Trigger: GATTAAAGGCATGGTCCACCAGGCCTGGCTCCCCTT...AGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR GCA 90 bp | CACTTTGAAGTTCACCTTCCCTTAATGACTTTCTTGAAACCTGACTCAAACTCTGTGAGAACAACCACTTaGCTTGCAGCAGGGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: HFEVHLPLMTFLKPDSNSVRTTT*LAAGDW Trigger: CCAATCCCCTGCTGCAAGGCAAGTGGTTGTTCTCAC...AGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACAGTGTGTGTGTGTGAATaGGTTCCTGTTTTGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVKGRVKVNSHDALLSFTVCVCE*VPVLKS Trigger: GCTTTTCAAAACAGGAACGCATTCACACACACACAC...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR GCA 90 bp | CACTTTGAAGTTCACCTTCCCTTAATGACTTTCTTGAAACCTGACTCAAACTCTACCAGTCTCTCTCTCTaGTGGTCTCAACCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HFEVHLPLMTFLKPDSNSTSLSL*WSQPFP Trigger: AGGGAAAGGTTGAGACCAGCAGAGAGAGAGACTGGT...AGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACACAGAGATACCCTGTCTaGAGGAAAAACAAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: SVKGRVKVNSHDALLSFTQRYPV*RKNKTQ Trigger: TTGTGTTTTGTTTTTCCTCCAGACAGGGTATCTCTG...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CAA 90 bp | GAACTCCAGAATCACTTTGAAGTTCACCTTCCCTTAATGACTTTCTaGAAACCTGACTCAAACTCTCCTCTTCCTTCGCTATCATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ELQNHFEVHLPLMTF*KPDSNSPLPSLSFL Trigger: GAGGAATGATAGCGAAGGAAGAGGAGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTGATTCTGGAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR TCA 72 bp | GGATTGGACTCACAGCCCTGGCTCATCTCTGGCGCCTaGAAACCTCACCAGTCTCTCTCTCTGCTGGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GLDSQPWLISGA*KPHQSLSLLVS Trigger: TGAGACCAGCAGAGAGAGAGACTGGTGAGGTTTTCAGGCGCCAGAGATGAGCCAGGGCTGTGAGTCCAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 72 bp | AGAGTGAGAACAACCACTTGCCTTGCAGCAGGGGATTaGACTCACAGCCCTGGCTCATCTCTGGCGCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RVRTTTCLAAGD*THSPGSSLAPE Trigger: TTCAGGCGCCAGAGATGAGCCAGGGCTGTGAGTCCAATCCCCTGCTGCAAGGCAAGTGGTTGTTCTCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR GCA 72 bp | GAAACAAGCCCCCACCCAGCAGTTCTCTCCCTACCATaGCTCTCCTCCTGTAAAAGGGTAGAAGAGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: ETSPHPAVLSLP*LSSCKRVEEAR Trigger: CCTTGCCTCTTCTACCCTTTTACAGGAGGAGAGGCATGGTAGGGAGAGAACTGCTGGGTGGGGGCTTGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 72 bp | TCTGGGCTCCAGTTTGGCCCCAGTGAAAAGAGATTATaGTTTGACCACCACTTGACAAGGGCACCGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SGLQFGPSEKRL*FDHHLTRAPQE Trigger: CTCCTGCGGTGCCCTTGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACTGGGGCCAAACTGGAGCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 72 bp | GAGTTCAAAGCCAGCCTGCTCTACAGAGCCAGTTCCTaGATAGTCAGGGCTACACAGAGATACCCTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: EFKASLLYRASS*IVRATQRYPVW Trigger: CCAGACAGGGTATCTCTGTGTAGCCCTGACTATCCAGGAACTGGCTCTGTAGAGCAGGCTGGCTTTGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR GCA 72 bp | TCTTCCTTCGCTATCATTCCTCTTGCCCTCGCCTCATaGAACCAGAGAGAGAAAGGGTCAGCTCATGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SSFAIIPLALAS*NQREKGSAHVS Trigger: AGACACATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGATAGCGAAGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CCA 72 bp | CTCCAAATAACTTCTCACTTCCAGGTTAAAGCTCAGTaGAGGGGGCAGGTAGCTTACGGAAACAAGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LQITSHFQVKAQ*RGQVAYGNKPP Trigger: TGGGGGCTTGTTTCCGTAAGCTACCTGCCCCCTCCACTGAGCTTTAACCTGGAAGTGAGAAGTTATTTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAACAAATTAAAAAGTAGCAGACTGTATCTCCCACTCGCCTTCTTGGCCTCCGAACAACCACTTGCCTaGCAGCAGGGGATTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: SNKLKSSRLYLPLAFLASEQPLA*QQGIGL Trigger: GAGTCCAATCCCCTGCTGCAAGGCAAGTGGTTGTTC...GGAGGCCAAGAAGGCGAGTGGGAGATACAGTCTGCTACTTTTTAATTTGTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | GCTCAGTGGAGGGGGCAGGTAGCTTACGGAAACAAGCCCCCACCCAGCAGTTCTGGGGGCACCTTGAGCTaGCGCGGACACGAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQWRGQVAYGNKPPPSSSGGTLS*RGHEKG Trigger: CCCCTTCTCGTGTCCGCGCCAGCTCAAGGTGCCCCC...AGAACTGCTGGGTGGGGGCTTGTTTCCGTAAGCTACCTGCCCCCTCCACTGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR GCA 90 bp | ATCATTCCTCTTGCCCTCGCCTCATGCAACCAGAGAGAGAAAGGGTCAGCTCATTGCCCTGCGCCACCGTaGGGTAGCCATCGTCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: IIPLALASCNQREKGSAHCPAPP*GSHRPR Trigger: TCTCGGACGATGGCTACCGCACGGTGGCGCAGGGCA...ATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | ATCATTCCTCTTGCCCTCGCCTCATGCAACCAGAGAGAGAAAGGGTCAGCTCATGCCGGCACCGTGCACTaGGAAGTTCTCGCAGCGCAA | + |
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Preference number: 4 (lower is better) Translates to: IIPLALASCNQREKGSAHAGTVH*EVLAAQ Trigger: TTGCGCTGCGAGAACTTCCCAGTGCACGGTGCCGGC...ATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | ACCAAAGGAAAACCTCGGATTTCTGTGGCTTTGCCTGTAAAAGCTGCTGGCTTCGGCGCAGCACAGCACTaGCCACACACCCACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TKGKPRISVALPVKAAGFGAAQH*PHTHPE Trigger: CTCTGGGTGGGTGTGTGGTCAGTGCTGTGCTGCGCC...GAAGCCAGCAGCTTTTACAGGCAAAGCCACAGAAATCCGAGGTTTTCCTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR GCA 90 bp | AGCATCGTCCTGCAAGTCTTAGCCAGAAGTCTTTTCGGCCACTGCCTTTGCCTTATCTCGCCGGCACCGTaGACTGGGAAGTTCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SIVLQVLARSLFGHCLCLISPAP*TGKFSQ Trigger: CTGCGAGAACTTCCCAGTGCACGGTGCCGGCGAGAT...AAGGCAAAGGCAGTGGCCGAAAAGACTTCTGGCTAAGACTTGCAGGACGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | AGCATCGTCCTGCAAGTCTTAGCCAGAAGTCTTTTCGGCCACTGCCTTTGCCTTAACGGCACGGAGGAATaGCTTGGTCGAGCACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SIVLQVLARSLFGHCLCLNGTEE*LGRARC Trigger: GCACCGTGCTCGACCAAGCCATTCCTCCGTGCCGTT...AAGGCAAAGGCAGTGGCCGAAAAGACTTCTGGCTAAGACTTGCAGGACGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | GGGCTCCAGTTTGGCCCCAGTGAAAAGAGATTATGGTTTGACCACCACTTGACAGTAGAAGCGACGCCATaGCTGCAGGGTCTTGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GLQFGPSEKRLWFDHHLTVEATP*LQGLAR Trigger: TCGGGCAAGACCCTGCAGTCATGGCGTCGCTTCTAC...TGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACTGGGGCCAAACTGGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR GCA 90 bp | AGTGAAAAGAGATTATGGTTTGACCACCACTTGACAAGGGCACCGCAGGAGGTCAAGCGACGCCATGACTaGAGGGTCTTGCCCGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SEKRLWFDHHLTRAPQEVKRRHD*RVLPDQ Trigger: CTGGTCGGGCAAGACCCTGCAGTCATGGCGTCGCTT...GACCTCCTGCGGTGCCCTTGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | ACCAAAGGAAAACCTCGGATTTCTGTGGCTTTGCCTGTAAAAGCTGCTGGCTTCGCGCCACTGCCACCATaGAGTAGCAACCCGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKGKPRISVALPVKAAGFAPLPP*SSNPTG Trigger: TCCTGTCGGGTTGCTACTTCATGGTGGCAGTGGCGC...GAAGCCAGCAGCTTTTACAGGCAAAGCCACAGAAATCCGAGGTTTTCCTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | GGGCTCCAGTTTGGCCCCAGTGAAAAGAGATTATGGTTTGACCACCACTTGACACCTTGCTGCTGTGGCTaGGTCTGTGGTAGAAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GLQFGPSEKRLWFDHHLTPCCCG*VCGRSD Trigger: GTCGCTTCTACCACAGACTCAGCCACAGCAGCAAGG...TGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACTGGGGCCAAACTGGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR GCA 90 bp | GGGCTCCAGTTTGGCCCCAGTGAAAAGAGATTATGGTTTGACCACCACTTGACAAAGACAAGCGGCCTCTaGCATCTGAGGGGGACATCG | + |
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Preference number: 4 (lower is better) Translates to: GLQFGPSEKRLWFDHHLTKTSGL*HLRGTS Trigger: CGATGTCCCCCTCAGATGGCAGAGGCCGCTTGTCTT...TGTCAAGTGGTGGTCAAACCATAATCTCTTTTCACTGGGGCCAAACTGGAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | ATCATTCCTCTTGCCCTCGCCTCATGCAACCAGAGAGAGAAAGGGTCAGCTCATAGTGAAAGGTGGGTCTaGCAGGTAGGGAGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: IIPLALASCNQREKGSAHSERWV*QVGSSR Trigger: CCTACTGCTCCCTACCTGCCAGACCCACCTTTCACT...ATGAGCTGACCCTTTCTCTCTCTGGTTGCATGAGGCGAGGGCAAGAGGAATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACAGATTGTCTTGACCGCTaGCACAGCCCACGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVKGRVKVNSHDALLSFTDCLDR*HSPRGQ Trigger: CTGGCCGCGTGGGCTGTGCCAGCGGTCAAGACAATC...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | AGCAACAAATTAAAAAGTAGCAGACTGTATCTCCCACTCGCCTTCTTGGCCTCCCTCATGGGAGAGAAGTaGCCCGGAGGGCAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: SNKLKSSRLYLPLAFLASLMGEK*PGGQGT Trigger: TGTGCCCTGCCCTCCGGGCCACTTCTCTCCCATGAG...GGAGGCCAAGAAGGCGAGTGGGAGATACAGTCTGCTACTTTTTAATTTGTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACAAGGGGGACATCGCAGTaGAAGGTGGGTCTGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVKGRVKVNSHDALLSFTRGTSQ*KVGLAG Trigger: ACCTGCCAGACCCACCTTTCACTGCGATGTCCCCCT...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR GCA 90 bp | ACCAAAGGAAAACCTCGGATTTCTGTGGCTTTGCCTGTAAAAGCTGCTGGCTTCTGCCACGTGCGCCACTaGCACCATGAAGTAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: TKGKPRISVALPVKAAGFCHVRH*HHEVAT Trigger: GGTTGCTACTTCATGGTGGCAGTGGCGCACGTGGCA...GAAGCCAGCAGCTTTTACAGGCAAAGCCACAGAAATCCGAGGTTTTCCTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | AGCAACAAATTAAAAAGTAGCAGACTGTATCTCCCACTCGCCTTCTTGGCCTCCAGGCCAACACGATGGTaGCCGGCACCGTGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SNKLKSSRLYLPLAFLASRPTRW*PAPCRA Trigger: TGCTCTACACGGTGCCGGCCACCATCGTGTTGGCCT...GGAGGCCAAGAAGGCGAGTGGGAGATACAGTCTGCTACTTTTTAATTTGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR TCA 90 bp | AGTGTCAAAGGTAGGGTAAAGGTCAACTCCCATGATGCTCTGCTCAGCTTTACAGGAAGGACGTCCCGATaGAGAGGTAGACGAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVKGRVKVNSHDALLSFTGRTSR*RGRRTR Trigger: CCTTGTTCGTCTACCTCTTCATCGGGACGTCCTTCC...TGTAAAGCTGAGCAGAGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | CACTTTGAAGTTCACCTTCCCTTAATGACTTTCTTGAAACCTGACTCAAACTCTGCAGCGCAACCGCTCTaGCCACTGGAAGCCGAACTT | + |
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Preference number: 4 (lower is better) Translates to: HFEVHLPLMTFLKPDSNSAAQPL*PLEAEL Trigger: AAGTTCGGCTTCCAGTGGCCAGAGCGGTTGCGCTGC...AGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CCA 90 bp | CACTTTGAAGTTCACCTTCCCTTAATGACTTTCTTGAAACCTGACTCAAACTCTCATCGCAGTGAAAGGTaGGTCTGGCAGGTAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HFEVHLPLMTFLKPDSNSHRSER*VWQVGS Trigger: GCTCCCTACCTGCCAGACCCACCTTTCACTGCGATG...AGAGTTTGAGTCAGGTTTCAAGAAAGTCATTAAGGGAAGGTGAACTTCAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| 3UTR CAA 72 bp | TTAACAACCAAAGGAAAACCTCGGATTTCTGTGGCTTaGCCTGTAAAAGCTGCTGGCTTCACAGTTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LTTKGKPRISVA*PVKAAGFTVRP Trigger: AGGCCTAACTGTGAAGCCAGCAGCTTTTACAGGCAAAGCCACAGAAATCCGAGGTTTTCCTTTGGTTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS CCA 90 bp | CCGAGATGCCTTTCTCGCCGTGATATGGCTGAGCCCGGGTGTCCGTaGGCAGCGCGCCCAGAAGAGCAAGCACCAGGGCGCAGAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PRCLSRRDMAEPGCP*AARPEEQAPGRRGP Trigger: TGGGCCTCTGCGCCCTGGTGCTTGCTCTTCTGGGCGCGCTGCCCACGGACACCCGGGCTCAGCCATATCACGGCGAGAAAGGCATCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CAA 90 bp | GCTCAGTGGAGGGGGCAGGTAGCTTACGGAAACAAGCCCCCACCCAGCAGTTCTAAAATGGTGATTGTCTaGACCGCTGGCACAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: AQWRGQVAYGNKPPPSSSKMVIV*TAGTAH Trigger: GTGGGCTGTGCCAGCGGTCAAGACAATCACCATTTT...AGAACTGCTGGGTGGGGGCTTGTTTCCGTAAGCTACCTGCCCCCTCCACTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS-3UTR CAA 90 bp | AGCATCGTCCTGCAAGTCTTAGCCAGAAGTCTTTTCGGCCACTGCCTTTGCCTTACCGCAGTTTCCCCCTaGCTGCTGTGGCTGAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SIVLQVLARSLFGHCLCLTAVSP*LLWLSL Trigger: CAGACTCAGCCACAGCAGCAAGGGGGAAACTGCGGT...AAGGCAAAGGCAGTGGCCGAAAAGACTTCTGGCTAAGACTTGCAGGACGATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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| CDS CCA 72 bp | CTTTCTCGCCGTGATATGGCTGAGCCCGGGTGTCCGTaGGCAGCGCGCCCAGAAGAGCAAGCACCAGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSRRDMAEPGCP*AARPEEQAPGR Trigger: GCGCCCTGGTGCTTGCTCTTCTGGGCGCGCTGCCCACGGACACCCGGGCTCAGCCATATCACGGCGAGAAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114246.4 |
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