Pregenerated sensors for FZD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045005Ensembl transcript IDs: ENSMUST00000063982.7, ENSMUST00000116133.4
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCACACAAGGCAAGCGTGCGCGCGCGCGCACACACACTGGCCCTaGCCACTGGTAATGATCACAGGAAACTGTGACAAAAAGGATTGC | + |
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Preference number: 1 (lower is better) Translates to: VHTRQACARAHTHWP*PLVMITGNCDKKDC Trigger: GCAATCCTTTTTGTCACAGTTTCCTGTGATCATTACCAGTGGCCAGGGCCAGTGTGTGTGCGCGCGCGCGCACGCTTGCCTTGTGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 90 bp | AAGGGTAAGGGAGAGGGGAGCAGAGGACAGAAAACTCCAGGCCTCTaGAGCTCCATCCAAAGGCATTCCCGGCCTCCAGCTCTAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: KGKGEGSRGQKTPGL*SSIQRHSRPPALAL Trigger: CAATGCTAGAGCTGGAGGCCGGGAATGCCTTTGGATGGAGCTTCAGAGGCCTGGAGTTTTCTGTCCTCTGCTCCCCTCTCCCTTACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 90 bp | AGTACAGATATGCAAAGTGGAGGAAAACGTGCGGTGGGAAGAGGGTaGGAAGAGGGGGTAGTCATCCGAAGGCAGCTTCCCTCTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: STDMQSGGKRAVGRG*EEGVVIRRQLPSSL Trigger: GAGGGAAGAGGGAAGCTGCCTTCGGATGACTACCCCCTCTTCCCACCCTCTTCCCACCGCACGTTTTCCTCCACTTTGCATATCTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR GCA 90 bp | CGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTGAATaGCCTGGACTCCAACTGCTGACTCGGTATGTGCCTCATTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RDRHCTCMPTMHSTE*PGLQLLTRYVPHLA Trigger: AGCCAAATGAGGCACATACCGAGTCAGCAGTTGGAGTCCAGGGCATTCAGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR GCA 90 bp | ATCCCTAAATTCAGTCCCCGCTCTGCCTTGGTCACTGGTACGCCCTaGCATTTCCTTCCCAGTAATGGCCCCACACTCTTAGTGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: IPKFSPRSALVTGTP*HFLPSNGPTLLVNE Trigger: TTCATTCACTAAGAGTGTGGGGCCATTACTGGGAAGGAAATGGCAGGGCGTACCAGTGACCAAGGCAGAGCGGGGACTGAATTTAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 90 bp | CATGATGTTTTCTCCTGGCAGCCGGTGTCAAGATTAGTGCTGCCCTaGCCCAGGAGGGAACAGCCTAATGAATACCAACTTAGAACCAGT | + |
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Preference number: 1 (lower is better) Translates to: HDVFSWQPVSRLVLP*PRREQPNEYQLRTS Trigger: ACTGGTTCTAAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGGGCAGCACTAATCTTGACACCGGCTGCCAGGAGAAAACATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 90 bp | ACCCTAGTCCTCTCAGCTACACAAGGCTGGCGGTGCACAAGTTGCTaGACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTATCAGTACA | + |
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Preference number: 1 (lower is better) Translates to: TLVLSATQGWRCTSC*TPPRLFISLLVIST Trigger: TGTACTGATAACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAGCCTTGTGTAGCTGAGAGGACTAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 90 bp | ACAGAGGACTTGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTCTaGCCTCTAAGTGTCCTGGACATTTTAAGCACTGTAAGAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: TEDLRGLDTERADGL*PLSVLDILSTVRRN Trigger: GTTTCTTCTTACAGTGCTTAAAATGTCCAGGACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAAGTCCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 90 bp | AGCAGACAATTCTTAGCCGCTGTACCTCACACCTGCCTGGATTTGTaGTGTGCTCAGTCCTGTTTGCCAGTGTTAGAACGCACTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: SRQFLAAVPHTCLDL*CAQSCLPVLERTYS Trigger: TGAATAAGTGCGTTCTAACACTGGCAAACAGGACTGAGCACATCACAAATCCAGGCAGGTGTGAGGTACAGCGGCTAAGAATTGTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 90 bp | TCAATCCTGCGATTGTCACCACACTACCAGAAGGCTCTGAGAGTCTaGAGCAGGTTAGCTACATCTTCCCTACCCTTCTTTACTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SILRLSPHYQKALRV*SRLATSSLPFFTVL Trigger: CAAGACAGTAAAGAAGGGTAGGGAAGATGTAGCTAACCTGCTTCAGACTCTCAGAGCCTTCTGGTAGTGTGGTGACAATCGCAGGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 90 bp | TCACAGAGTCCTGCATCTAGGTGTACAAGGTCTTGTGGAAGCCACTaGAATTCTAATTCTGACTCCAGTGAGCGAGGGCAGAGTATTTTA | + |
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Preference number: 1 (lower is better) Translates to: SQSPASRCTRSCGSH*NSNSDSSERGQSIL Trigger: TAAAATACTCTGCCCTCGCTCACTGGAGTCAGAATTAGAATTTCAGTGGCTTCCACAAGACCTTGTACACCTAGATGCAGGACTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTCCCCGCTCTGCCTTGGTCACTGGTACGCCCTGCCATTTCCTTCCCAGTCTCCCTCCCCCAGTCTaGGCACTTCATTGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FSPRSALVTGTPCHFLPSLPPPV*ALHWWV Trigger: CACCCACCAATGAAGTGCTCAGACTGGGGGAGGGAG...ACTGGGAAGGAAATGGCAGGGCGTACCAGTGACCAAGGCAGAGCGGGGACTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCCAGGAGGGAACAGCCTAATGAATACCAACTTAGAACCAGTGCCATCCAAGCATCCCAGGGGTTaGGAGGTGAGTGAGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGPGGNSLMNTNLEPVPSKHPRG*EVSEVA Trigger: GGCCACCTCACTCACCTCTCAACCCCTGGGATGCTT...GGATGGCACTGGTTCTAAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGTTGGCTTCAGGGAAGCAGGTGCGCTTTGTCTCTCTAAGGGTAAGGGAGAGAGCAGATGGCCTCTaGCCTCTAAGTGTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLLASGKQVRFVSLRVRERADGL*PLSVLD Trigger: GTCCAGGACACTTAGAGGCCAGAGGCCATCTGCTCT...CTCCCTTACCCTTAGAGAGACAAAGCGCACCTGCTTCCCTGAAGCCAACAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | GGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTATGGCTCTATCGGGGATaGGAAAGATGGCAGCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: GGAQVAELPQGFSFRFLLWLYRG*ERWQLG Trigger: GCCGAGCTGCCATCTTTCTCATCCCCGATAGAGCCA...TAACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCCAGGAGGGAACAGCCTAATGAATACCAACTTAGAACCAGTGCCATCCGGCCATCGGAGTCATTaGGGTCCTGCTTCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PGPGGNSLMNTNLEPVPSGHRSH*GPASFF Trigger: AAAGAAAGAAGCAGGACCTCAATGACTCCGATGGCC...GGATGGCACTGGTTCTAAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR CCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCATTCCAGCACTGTCCCTaGGCCTCGGCCTCCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAFQHCP*ASASRP Trigger: AGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAA...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCCAGGAGGGAACAGCCTAATGAATACCAACTTAGAACCAGTGCCATCCCACAGAAAGAGCAGATaGCCTCTGGCCTCTAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGPGGNSLMNTNLEPVPSHRKSR*PLASKC Trigger: ACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTG...GGATGGCACTGGTTCTAAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTGTACATGCGCACAAGTaGACACAAGGCAAGCGTGCG | + |
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Preference number: 2 (lower is better) Translates to: ILTARDRHCTCMPTMHSTVHAHK*TQGKRA Trigger: CGCACGCTTGCCTTGTGTGCACTTGTGCGCATGTAC...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | GTACTGACTGACTCCCAGGCACAAAACCAAACCAAACGTCTCTCCAAGACGCTCTTTCCCAGGATCACTTaGTTGGACTTTGGCGACAAG | + |
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Preference number: 2 (lower is better) Translates to: VLTDSQAQNQTKRLSKTLFPRIT*LDFGDK Trigger: CTTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAA...GAGCGTCTTGGAGAGACGTTTGGTTTGGTTTTGTGCCTGGGAGTCAGTCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTCTGGACTCCAACTGCTaGCTCGGTATGTGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: ILTARDRHCTCMPTMHSTLDSNC*LGMCLI Trigger: AATGAGGCACATACCGAGTCAGCAGTTGGAGTCCAG...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTAAAACTCCAGGCCTCTaGAGCTCCATCCAAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: ILTARDRHCTCMPTMHSTKTPGL*SSIQRH Trigger: ATGCCTTTGGATGGAGCTTCAGAGGCCTGGAGTTTT...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTCTCGATTTTCTTTGTaGGAGAGGAACAACCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LAVHKLLNSPKAFHFASCSRFSL*ERNNPN Trigger: GTTAGGGTTGTTCCTCTCTCACAAAGAAAATCGAGA...ACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CAA 90 bp | TACACTTACAGTAGCCCCCATATTACAAAGCTTAAGTTAGGAGTCTaGTTGGTTTTCAGGCTACTAGGGCATGGTGTAGCTGCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: YTYSSPHITKLKLGV*LVFRLLGHGVAALG Trigger: CCCCAAAGCAGCTACACCATGCCCTAGTAGCCTGAAAACCAACAAGACTCCTAACTTAAGCTTTGTAATATGGGGGCTACTGTAAGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTAGGGCATGGTGTAGCTaGTTTGGGGAATATATCTAT | + |
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Preference number: 2 (lower is better) Translates to: ILTARDRHCTCMPTMHSTRAWCS*FGEYIY Trigger: ATAGATATATTCCCCAAAGCAGCTACACCATGCCCT...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTTTTGAAAAACAGAAGTaGTGCATAGCCAGTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: ILTARDRHCTCMPTMHSTFEKQK*CIASEC Trigger: ACACTCACTGGCTATGCACCACTTCTGTTTTTCAAA...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR TCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAGAAGGTAAACGGAAGTaGCCTTCACAAAGCTACCAA | + |
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Preference number: 2 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAEGKRK*PSQSYQ Trigger: TTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTC...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGGCAAATGTTTAGGTCCGCTCTATAATGCCTCCTCTAACTTATTCAAGGTCCTAACCACATCATaGTCTACTTTCACAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LQGKCLGPLYNASSNLFKVLTTS*STFTED Trigger: GTCCTCTGTGAAAGTAGACCATGATGTGGTTAGGAC...CTTGAATAAGTTAGAGGAGGCATTATAGAGCGGACCTAAACATTTGCCTTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | AGGCAAGCGTGCGCGCGCGCGCACACACACTGGCCCTaGCCACTGGTAATGATCACAGGAAACTGTGACAAA | + |
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Preference number: 3 (lower is better) Translates to: RQACARAHTHWP*PLVMITGNCDK Trigger: TTTGTCACAGTTTCCTGTGATCATTACCAGTGGCCAGGGCCAGTGTGTGTGCGCGCGCGCGCACGCTTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | ATGCAAAGTGGAGGAAAACGTGCGGTGGGAAGAGGGTaGGAAGAGGGGGTAGTCATCCGAAGGCAGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: MQSGGKRAVGRG*EEGVVIRRQLP Trigger: GGGAAGCTGCCTTCGGATGACTACCCCCTCTTCCCACCCTCTTCCCACCGCACGTTTTCCTCCACTTTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR CAA 90 bp | GGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTAAGTCCCCGCTCTGCCTaGGTCACTGGTACGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GGAQVAELPQGFSFRFLLSPRSA*VTGTPC Trigger: GCAGGGCGTACCAGTGACCAAGGCAGAGCGGGGACT...TAACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR GCA 72 bp | TTCAGTCCCCGCTCTGCCTTGGTCACTGGTACGCCCTaGCATTTCCTTCCCAGTAATGGCCCCACACTCTTA | + |
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Preference number: 3 (lower is better) Translates to: FSPRSALVTGTP*HFLPSNGPTLL Trigger: TAAGAGTGTGGGGCCATTACTGGGAAGGAAATGGCAGGGCGTACCAGTGACCAAGGCAGAGCGGGGACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | ACCTCCCTCCCCCAGTCTGAGCACTTCATTGGTGGGTaGGTGTGGTTTCTAATCACCACTCTCCACCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSLPQSEHFIGG*VWFLITTLHQE Trigger: CTCCTGGTGGAGAGTGGTGATTAGAAACCACACCCACCCACCAATGAAGTGCTCAGACTGGGGGAGGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | TTCTCCTGGCAGCCGGTGTCAAGATTAGTGCTGCCCTaGCCCAGGAGGGAACAGCCTAATGAATACCAACTT | + |
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Preference number: 3 (lower is better) Translates to: FSWQPVSRLVLP*PRREQPNEYQL Trigger: AAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGGGCAGCACTAATCTTGACACCGGCTGCCAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR GCA 72 bp | CACTGTACATGTATGCCAACCATGCACAGCACTGAATaGCCTGGACTCCAACTGCTGACTCGGTATGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: HCTCMPTMHSTE*PGLQLLTRYVP Trigger: AGGCACATACCGAGTCAGCAGTTGGAGTCCAGGGCATTCAGTGCTGTGCATGGTTGGCATACATGTACAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | CTCTCAGCTACACAAGGCTGGCGGTGCACAAGTTGCTaGACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: LSATQGWRCTSC*TPPRLFISLLV Trigger: AACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAGCCTTGTGTAGCTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | TTCTTAGCCGCTGTACCTCACACCTGCCTGGATTTGTaGTGTGCTCAGTCCTGTTTGCCAGTGTTAGAACGC | + |
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Preference number: 3 (lower is better) Translates to: FLAAVPHTCLDL*CAQSCLPVLER Trigger: GCGTTCTAACACTGGCAAACAGGACTGAGCACATCACAAATCCAGGCAGGTGTGAGGTACAGCGGCTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | CCTACCCTTCTTTACTGTCTTGTTAGGTTTCCCTTCTaGGCGCACTCCCCAAGCCAGGCTGTTTCTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PTLLYCLVRFPF*AHSPSQAVSFP Trigger: TGGGAAAGAAACAGCCTGGCTTGGGGAGTGCGCTCAGAAGGGAAACCTAACAAGACAGTAAAGAAGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | CATTTTAGATCCCTAAATTCAGTCCCCGCTCTGCCTTaGTCACTGGTACGCCCTGCCATTTCCTTCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: HFRSLNSVPALP*SLVRPAISFPV Trigger: TACTGGGAAGGAAATGGCAGGGCGTACCAGTGACCAAGGCAGAGCGGGGACTGAATTTAGGGATCTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR-3UTR CAA 90 bp | GTACTGACTGACTCCCAGGCACAAAACCAAACCAAACGTCTCTCCAAGACGCTCCTTTCCCAGGATCACTaGATTGGACTTTGGCGACAA | + |
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Preference number: 3 (lower is better) Translates to: VLTDSQAQNQTKRLSKTLLSQDH*IGLWRQ Trigger: TTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAAG...GAGCGTCTTGGAGAGACGTTTGGTTTGGTTTTGTGCCTGGGAGTCAGTCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | CCTGCATCTAGGTGTACAAGGTCTTGTGGAAGCCACTaGAATTCTAATTCTGACTCCAGTGAGCGAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PASRCTRSCGSH*NSNSDSSERGQ Trigger: CTGCCCTCGCTCACTGGAGTCAGAATTAGAATTTCAGTGGCTTCCACAAGACCTTGTACACCTAGATGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | TTGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTCTaGCCTCTAAGTGTCCTGGACATTTTAAGCACTGTA | + |
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Preference number: 3 (lower is better) Translates to: LRGLDTERADGL*PLSVLDILSTV Trigger: TACAGTGCTTAAAATGTCCAGGACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | AGGCTGTTTCTTTCCCAGGATCACTTGATTGGACTTTaGCGACAAGAAAGGGCAGAGAGAGGCAGCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: RLFLSQDHLIGL*RQERAERGSRQ Trigger: TTGTCTGCTGCCTCTCTCTGCCCTTTCTTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAAGAAACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR CCA 72 bp | GCACAAAACCAAACCAAACGTCTCTCCAAGACGCTCTaGGTCTCCTTTTGCGAGCGTTATGGGTTCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: AQNQTKRLSKTL*VSFCERYGFRI Trigger: AATCCTGAACCCATAACGCTCGCAAAAGGAGACCCAGAGCGTCTTGGAGAGACGTTTGGTTTGGTTTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | GACTCCAGTGAGCGAGGGCAGAGTATTTTACAAATGTaGACACCCTCTGACTGCTTACATTCCCAGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: DSSERGQSILQM*TPSDCLHSQWE Trigger: TTCCCACTGGGAATGTAAGCAGTCAGAGGGTGTTCACATTTGTAAAATACTCTGCCCTCGCTCACTGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | CGATTGTCACCACACTACCAGAAGGCTCTGAGAGTCTaGAGCAGGTTAGCTACATCTTCCCTACCCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: RLSPHYQKALRV*SRLATSSLPFF Trigger: AAAGAAGGGTAGGGAAGATGTAGCTAACCTGCTTCAGACTCTCAGAGCCTTCTGGTAGTGTGGTGACAATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR GCA 72 bp | GGCTTTTCATTTCGCTTCTTGTTATCAGTACAGATATaGAAAGTGGAGGAAAACGTGCGGTGGGAAGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: GFSFRFLLSVQI*KVEENVRWEEG Trigger: ACCCTCTTCCCACCGCACGTTTTCCTCCACTTTGCATATCTGTACTGATAACAAGAAGCGAAATGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| 3UTR TCA 72 bp | ACTAACATAAGCACATACAGTTGCTGTTGTACTGACTaGCTCCCAGGCACAAAACCAAACCAAACGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TNISTYSCCCTD*LPGTKPNQTSL Trigger: GAGAGACGTTTGGTTTGGTTTTGTGCCTGGGAGTCAGTCAGTACAACAGCAACTGTATGTGCTTATGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| 3UTR GCA 72 bp | CTTGTTGGTTTTCAGGCTACTAGGGCATGGTGTAGCTaGTTTGGGGAATATATCTATCTGGCTTTAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVGFQATRAWCS*FGEYIYLALNL Trigger: AAGGTTTAAAGCCAGATAGATATATTCCCCAAAGCAGCTACACCATGCCCTAGTAGCCTGAAAACCAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| 3UTR TCA 72 bp | CAAAAAGCCTTCCTAATATCTGGCCATCGGAGTCATTaGGGTCCTGCTTCTTTCTTTAAACTACCTAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: QKAFLISGHRSH*GPASFFKLPKS Trigger: GGATTTAGGTAGTTTAAAGAAAGAAGCAGGACCTCAATGACTCCGATGGCCAGATATTAGGAAGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR GCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTGCCCGGCCCACCAGCTaGGCCAGCAACAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLARPTS*ASNSSR Trigger: TCTGCTGCTGTTGCTGGCGCAGCTGGTGGGCCGGGC...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTAGGGCACCGCGCAGTTaGGCACTTGGCCGGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLRAPRS*ALGRCA Trigger: TGCGCACCGGCCAAGTGCCCAACTGCGCGGTGCCCT...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTAGCAGCAGCGGCTGGTaGACCGCCGCCAAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLSSSGW*TAAKTP Trigger: TGGAGTCTTGGCGGCGGTTCACCAGCCGCTGCTGCT...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTGGCTGCAAGCGACGCTaGCATGGCCCACTACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLGCKRR*HGPLPG Trigger: GCCTGGTAGTGGGCCATGCCAGCGTCGCTTGCAGCC...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTGTGACTCCTTCAGGATaGGCACGAAGGGCTCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLVTPSG*ARRARG Trigger: GCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCAC...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTGCGCAGTTGGGCACTTaGCCGGTGCGCACCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLAQLGT*PVRTLL Trigger: CAACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGC...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGTGCGCTCGTCCGGGCTaGAGGACGGCTGGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASCARPG*RTAGSR Trigger: CCTGCTACCAGCCGTCCTTCAGCCCGGACGAGCGCA...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCCGGCCCACCAGCTaGGCCAGCAACAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASARPTS*ASNSSR Trigger: TCTGCTGCTGTTGCTGGCGCAGCTGGTGGGCCGGGC...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | CCGAAGGCAGCTTCCCTCTTCCCTCCCCTAGGGCTGGCTAGAAACTCCTGTTGGGGCTGTGCTCACGGCTaGAAGCGACGCTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKAASLFPPLGLARNSCWGCAHG*KRRWHG Trigger: GCCATGCCAGCGTCGCTTGCAGCCGTGAGCACAGCC...CCAACAGGAGTTTCTAGCCAGCCCTAGGGGAGGGAAGAGGGAAGCTGCCTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR GCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTTGCCCACATAGCAGATaGCAGCCACTGGGTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLCPHSR*QPLGPR Trigger: ACGGGGACCCAGTGGCTGGCATCTGCTATGTGGGCA...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | TACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGAGGGCACCGCGCAGTTaGGCACTTGGCCGGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQAKQLPPSTSSTVPGPRRAPRS*ALGRCA Trigger: TGCGCACCGGCCAAGTGCCCAACTGCGCGGTGCCCT...CCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTCACCACGATGCTGGCTaGCACCGTGTAGAGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLHHDAG*HRVEQG Trigger: ACCCTGCTCTACACGGTGCCAGCCAGCATCGTGGTG...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | TACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGGGCACATGGGCACCGTaGTTTCCTGGCACACCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YQAKQLPPSTSSTVPGPRGTWAP*FPGTPG Trigger: CCCCGGTGTGCCAGGAAATCACGGTGCCCATGTGCC...CCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTCCGTGTAGAGCAGGGTaGAGATGCCGATGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLPCRAG*RCRCGS Trigger: TGATCCGCATCGGCATCTTCACCCTGCTCTACACGG...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTTGCGACAGGGACACTTaGTTGTGGTATGCGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLCDRDT*LWYAAV Trigger: CACCGCCGCATACCACAAGCAAGTGTCCCTGTCGCA...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGGCACCGTGATTTCCTaGCACACCGGGGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASGTVIS*HTGALE Trigger: CTCCAAGGCCCCGGTGTGCCAGGAAATCACGGTGCC...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGGCCAATCCAGAAGGTaGCGAATGTGCGCTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASGQSRR*RMCARP Trigger: CGGACGAGCGCACATTCGCCACCTTCTGGATTGGCC...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTGTTTCTTTCCCAGGATCACTTGATTGGACTTTGGCGACAAGAAAGGTGTGGTATGCGGCGGTaGGGCCAGGCGGCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLFLSQDHLIGLWRQERCGMRR*GQAARS Trigger: GGACCGGGCCGCCTGGCCCCACCGCCGCATACCACA...CCTTTCTTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAAGAAACAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | TACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGAGGGACACTTGCTTGTaGTATGCGGCGGTGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQAKQLPPSTSSTVPGPRRDTCL*YAAVGP Trigger: TGGCCCCACCGCCGCATACCACAAGCAAGTGTCCCT...CCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | GTACTGACTGACTCCCAGGCACAAAACCAAACCAAACGTCTCTCCAAGACGCTCTGCGCTCGTCCGGGCTaGAGGACGGCTGGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLTDSQAQNQTKRLSKTLCARPG*RTAGSR Trigger: CCTGCTACCAGCCGTCCTTCAGCCCGGACGAGCGCA...GAGCGTCTTGGAGAGACGTTTGGTTTGGTTTTGTGCCTGGGAGTCAGTCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGTGCCGATGCGGATCATaGGCTTCTCTAGCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASCRCGS*ASLACP Trigger: CGGACAAGCTAGAGAAGCTCATGATCCGCATCGGCA...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CTGGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTAGCAGCAGCGGCTGGTaGACCGCCGCCAAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVHKLLNSPKAFHFASCSSSGW*TAAKTP Trigger: TGGAGTCTTGGCGGCGGTTCACCAGCCGCTGCTGCT...ACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | ACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAACTGCTGTGGTATGCGGCGGTaGGGCCAGGCGGCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKKVNGSDLHKATKRNNCCGMRR*GQAARS Trigger: GGACCGGGCCGCCTGGCCCCACCGCCGCATACCACA...GCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | GACTTGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTCTGGCCTCTAAGTGTCTGCGACAGGGACACTTaGTTGTGGTATGCGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRGLDTERADGLWPLSVCDRDT*LWYAAV Trigger: CACCGCCGCATACCACAAGCAAGTGTCCCTGTCGCA...GACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGTGTCATGGTTGAACTaGTTGGGCATGTGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSETTAPFNFQHCPWASVSWLN*LGMCVR Trigger: CCTGACGCACATGCCCAACCAGTTCAACCATGACAC...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCCAGGAGGGAACAGCCTAATGAATACCAACTTAGAACCAGTGCCATCCGGCCAATCCAGAAGGTaGCGAATGTGCGCTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGPGGNSLMNTNLEPVPSGQSRR*RMCARP Trigger: CGGACGAGCGCACATTCGCCACCTTCTGGATTGGCC...GGATGGCACTGGTTCTAAGTTGGTATTCATTAGGCTGTTCCCTCCTGGGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGTGGGCCGGAGCCGCAGATTCGAAGCAATGGGAATTTACTTTAATTACGGCACATGGGCACCGTaGTTTCCTGGCACACCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEVGRSRRFEAMGIYFNYGTWAP*FPGTPG Trigger: CCCCGGTGTGCCAGGAAATCACGGTGCCCATGTGCC...GTAATTAAAGTAAATTCCCATTGCTTCGAATCTGCGGCTCCGGCCCACCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | GACTTGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTCTGGCCTCTAAGTGTCGTTGTAGAGTGGGTGTaGCTCCTTCAGGATGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLRGLDTERADGLWPLSVVVEWV*LLQDGH Trigger: GTGCCCATCCTGAAGGAGTCACACCCACTCTACAAC...GACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTGTTTCTTTCCCAGGATCACTTGATTGGACTTTGGCGACAAGAAAGGGCGCAGTTGGGCACTTaGCCGGTGCGCACCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLFLSQDHLIGLWRQERAQLGT*PVRTLL Trigger: CAACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGC...CCTTTCTTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAAGAAACAGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACGGCTGCAAGCGACGCTaGCATGGCCCACTACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNGCKRR*HGPLPG Trigger: GCCTGGTAGTGGGCCATGCCAGCGTCGCTTGCAGCC...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | GGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTAAGGCCACCACGATGCTaGCTGGCACCGTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGAQVAELPQGFSFRFLLRPPRC*LAPCRA Trigger: TGCTCTACACGGTGCCAGCCAGCATCGTGGTGGCCT...TAACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACCCCAGTACTCGGGTTTaGCGCGTGGCTGGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNPSTRV*RVAGQR Trigger: ACGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGG...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTAGGTTTGGCGCGTGGCTaGCCAGCGTCCGGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVGLARG*PASGPG Trigger: TCCGGGACCGGACGCTGGCCAGCCACGCGCCAAACC...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGTGGGCCGGAGCCGCAGATTCGAAGCAATGGGAATTTACTTTAATTACCCTGCGTGTCATGGTTaGACTGGTTGGGCATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KEVGRSRRFEAMGIYFNYPACHG*TGWACA Trigger: CGCACATGCCCAACCAGTTCAACCATGACACGCAGG...GTAATTAAAGTAAATTCCCATTGCTTCGAATCTGCGGCTCCGGCCCACCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | AGCGAGGGCAGAGTATTTTACAAATGTGAACACCCTCTGACTGCTTACATTCCCGAAGCGCAGGTCCGGTaGGCAGTGGATCTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEGRVFYKCEHPLTAYIPEAQVR*AVDLHK Trigger: CTTGTGGAGATCCACTGCTCACCGGACCTGCGCTTC...GGGAATGTAAGCAGTCAGAGGGTGTTCACATTTGTAAAATACTCTGCCCTCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | GTGGGCCGGAGCCGCAGATTCGAAGCAATGGGAATTTACTTTAATTACTGGAAGCCGTGTAGAGCAGGGTaGAGATGCCGATGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSRRFEAMGIYFNYWKPCRAG*RCRCGS Trigger: TGATCCGCATCGGCATCTTCACCCTGCTCTACACGG...CTTCCAGTAATTAAAGTAAATTCCCATTGCTTCGAATCTGCGGCTCCGGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR GCA 90 bp | ACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAACTGCTGCCCACATAGCAGATaGCAGCCACTGGGTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKKVNGSDLHKATKRNNCCPHSR*QPLGPR Trigger: ACGGGGACCCAGTGGCTGGCATCTGCTATGTGGGCA...GCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CTGGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTGTGTCATGGTTGAACTaGTTGGGCATGTGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVHKLLNSPKAFHFASCVSWLN*LGMCVR Trigger: CCTGACGCACATGCCCAACCAGTTCAACCATGACAC...ACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAGGCCACCACGATGCTaGCTGGCACCGTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNRPPRC*LAPCRA Trigger: TGCTCTACACGGTGCCAGCCAGCATCGTGGTGGCCT...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAGGGACACTTGCTTGTaGTATGCGGCGGTGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNRDTCL*YAAVGP Trigger: TGGCCCCACCGCCGCATACCACAAGCAAGTGTCCCT...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCATCCAGACTCCCGACGTaGTGCCCACCACCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKASRLPT*CPPPGT Trigger: TGTGCCTGGTGGTGGGCATCACGTCGGGAGTCTGGA...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACTGGGCACTTGGCCGGTaGGCACCTTGTTGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNWALGR*APCCRV Trigger: CACTCTACAACAAGGTGCGCACCGGCCAAGTGCCCA...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGGCAAATGTTTAGGTCCGCTCTATAATGCCTCCTCTAACTTATTCAAGGTGACTCCTTCAGGATaGGCACGAAGGGCTCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGKCLGPLYNASSNLFKVTPSG*ARRARG Trigger: GCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCAC...CTTGAATAAGTTAGAGGAGGCATTATAGAGCGGACCTAAACATTTGCCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| 3UTR CAA 72 bp | GTCCTAACCACATCATGGTCTACTTTCACAGAGGACTaGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLTTSWSTFTED*RGLDTERADGL Trigger: GAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAAGTCCTCTGTGAAAGTAGACCATGATGTGGTTAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | GTGGGCCGGAGCCGCAGATTCGAAGCAATGGGAATTTACTTTAATTACTGGAAGATCGTTCCATGTCAATaGGGAAGGTGGCAACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRSRRFEAMGIYFNYWKIVPCQ*GRWQRW Trigger: CCACCGTTGCCACCTTCCTCATTGACATGGAACGAT...CTTCCAGTAATTAAAGTAAATTCCCATTGCTTCGAATCTGCGGCTCCGGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTATCCAGACTCCCGACGTaGTGCCCACCACCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVSRLPT*CPPPGT Trigger: TGTGCCTGGTGGTGGGCATCACGTCGGGAGTCTGGA...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTAGGCACCGTGATTTCCTaGCACACCGGGGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVGTVIS*HTGALE Trigger: CTCCAAGGCCCCGGTGTGCCAGGAAATCACGGTGCC...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCACACCACGATGCTGGCTaGCACCGTGTAGAGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAHHDAG*HRVEQG Trigger: ACCCTGCTCTACACGGTGCCAGCCAGCATCGTGGTG...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CTTTACACTTACAGTAGCCCCCATATTACAAAGCTTAAGTTAGGAGTCTTGTTGCCCAGTACTCGGGTTTaGCGCGTGGCTGGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYTYSSPHITKLKLGVLLPSTRV*RVAGQR Trigger: ACGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGG...CAACAAGACTCCTAACTTAAGCTTTGTAATATGGGGGCTACTGTAAGTGTAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| 3UTR CAA 72 bp | AGGTTAGCTACATCTTCCCTACCCTTCTTTACTGTCTaGTTAGGTTTCCCTTCTGAGCGCACTCCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLATSSLPFFTV*LGFPSERTPQA Trigger: GGCTTGGGGAGTGCGCTCAGAAGGGAAACCTAACAAGACAGTAAAGAAGGGTAGGGAAGATGTAGCTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR TCA 90 bp | ACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAACTGCATCGTTCCATGTCAATaGGGAAGGTGGCAACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKKVNGSDLHKATKRNNCIVPCQ*GRWQRW Trigger: CCACCGTTGCCACCTTCCTCATTGACATGGAACGAT...GCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | GGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTCGCTTCTTGTTAAAGGTGGAAGTACTGTaGATAACCTGCGATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGAQVAELPQGFSFRFLLKVEVL*ITCDGF Trigger: GAAGCCATCGCAGGTTATGCACAGTACTTCCACCTT...TAACAAGAAGCGAAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAAGACTCCAGAGTCTTaGCGGACCAGATCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNKTPES*RTRSRL Trigger: GAGTCTGGATCTGGTCCGGCAAGACTCTGGAGTCTT...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | ACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAACTGCAAGACTCCAGAGTCTTaGCGGACCAGATCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TKKVNGSDLHKATKRNNCKTPES*RTRSRL Trigger: GAGTCTGGATCTGGTCCGGCAAGACTCTGGAGTCTT...GCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTACCTGCGTGTCATGGTTaGACTGGTTGGGCATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVPACHG*TGWACA Trigger: CGCACATGCCCAACCAGTTCAACCATGACACGCAGG...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCATGCCGATGCGGATCATaGGCTTCTCTAGCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKACRCGS*ASLACP Trigger: CGGACAAGCTAGAGAAGCTCATGATCCGCATCGGCA...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTATGGGCACTTGGCCGGTaGGCACCTTGTTGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVWALGR*APCCRV Trigger: CACTCTACAACAAGGTGCGCACCGGCCAAGTGCCCA...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCACCAGAAGGAAGAGCGTaGCCACCAACAGGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAPEGRA*PPTGTA Trigger: TGCTGTACCTGTTGGTGGGCACGCTCTTCCTTCTGG...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | GGCAAATGTTTAGGTCCGCTCTATAATGCCTCCTCTAACTTATTCAAGACACGAGTCTTAGTGCCACCCTaGTTGATGACGCTCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKCLGPLYNASSNLFKTRVLVPP*LMTLRM Trigger: CATCCGGAGCGTCATCAAGCAGGGTGGCACTAAGAC...TCGTGTCTTGAATAAGTTAGAGGAGGCATTATAGAGCGGACCTAAACATTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR GCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAGTCTTAGTGCCACCCTaGTTGATGACGCTCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAVLVPP*LMTLRM Trigger: CATCCGGAGCGTCATCAAGCAGGGTGGCACTAAGAC...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR TCA 90 bp | GTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAAGGTAGTTGTAGAGTGGGTGTaGCTCCTTCAGGATGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSLQCQFEDYVAPKAKVVVEWV*LLQDGH Trigger: GTGCCCATCCTGAAGGAGTCACACCCACTCTACAAC...TACCTTTGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAAGGTGGAAGTACTGTaGATAACCTGCGATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISTKKVNGSDLHKATKRNKVEVL*ITCDGF Trigger: GAAGCCATCGCAGGTTATGCACAGTACTTCCACCTT...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCATCGTCCTGCGTGTCATaGTTGAACTGGTTGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PTVTSLQCQFEDYVAPKASSCVS*LNWLGM Trigger: CATGCCCAACCAGTTCAACCATGACACGCAGGACGA...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR GCA 90 bp | CTTTACACTTACAGTAGCCCCCATATTACAAAGCTTAAGTTAGGAGTCTTGTTGCCAGAAGGAAGAGCGTaGCCACCAACAGGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYTYSSPHITKLKLGVLLPEGRA*PPTGTA Trigger: TGCTGTACCTGTTGGTGGGCACGCTCTTCCTTCTGG...CAACAAGACTCCTAACTTAAGCTTTGTAATATGGGGGCTACTGTAAGTGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| 3UTR CAA 72 bp | AGCCCCCATATTACAAAGCTTAAGTTAGGAGTCTTGTaGGTTTTCAGGCTACTAGGGCATGGTGTAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPHITKLKLGVL*VFRLLGHGVAA Trigger: AGCAGCTACACCATGCCCTAGTAGCCTGAAAACCAACAAGACTCCTAACTTAAGCTTTGTAATATGGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS GCA 90 bp | TGGCACACCGGGGCCTTGGAGGCGGCCGCTGCCCGGCCCACCAGCTaGGCCAGCAACAGCAGCAGAAGAGAGGGAGGCGCAGACGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WHTGALEAAAARPTS*ASNSSRREGGADGS Trigger: CGACCCGTCTGCGCCTCCCTCTCTTCTGCTGCTGTTGCTGGCGCAGCTGGTGGGCCGGGCAGCGGCCGCCTCCAAGGCCCCGGTGTGCCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS GCA 90 bp | CCCGGTCCTGCCGGTGAGCGCGGCGCTGGCCTCCGCATAGTCTCCTaGGGCCATAGCGCCACCGCTCTTGTGGCCCCGCCGAGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPAGERGAGLRIVS*GHSATALVAPPRAA Trigger: TGCAGCTCTCGGCGGGGCCACAAGAGCGGTGGCGCTATGGCCGCAGGAGACTATGCGGAGGCCAGCGCCGCGCTCACCGGCAGGACCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS GCA 90 bp | GCGTGGCTGGCCAGCGTCCGGTCCCGGACACGCGCAGGTGAGGGCTaGCTCCCAGCTCTCCCGGTAGTGCTGCTCATACAGGTAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AWLASVRSRTRAGEG*LPALPVVLLIQVAG Trigger: GCCTGCTACCTGTATGAGCAGCACTACCGGGAGAGCTGGGAGGCAGCCCTCACCTGCGCGTGTCCGGGACCGGACGCTGGCCAGCCACGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS TCA 90 bp | GTTTGGCGCGTGGCTGGCCAGCGTCCGGTCCCGGACACGCGCAGGTaGGGGCTGCCTCCCAGCTCTCCCGGTAGTGCTGCTCATACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWRVAGQRPVPDTRR*GLPPSSPGSAAHTG Trigger: ACCTGTATGAGCAGCACTACCGGGAGAGCTGGGAGGCAGCCCTCACCTGCGCGTGTCCGGGACCGGACGCTGGCCAGCCACGCGCCAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS GCA 90 bp | GTGGGTGTGACTCCTTCAGGATGGGCACGAAGGGCTCGCGGCACGTaGACACGGATGGGCCTCCCGAGGGGCACTCGCCCCCGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGVTPSGWARRARGT*TRMGLPRGTRPRKM Trigger: CATCTTCCGGGGGCGAGTGCCCCTCGGGAGGCCCATCCGTGTGCACGTGCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCACACCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS CCA 90 bp | GGCCGGTGCGCACCTTGTTGTAGAGTGGGTGTGACTCCTTCAGGATaGGCACGAAGGGCTCGCGGCACGTGCACACGGATGGGCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRCAPCCRVGVTPSG*ARRARGTCTRMGLP Trigger: CGGGAGGCCCATCCGTGTGCACGTGCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCACACCCACTCTACAACAAGGTGCGCACCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS CCA 90 bp | AAGTACTTGAGCATGAGCACCCAGTACTCGGGTTTGGCGCGTGGCTaGCCAGCGTCCGGTCCCGGACACGCGCAGGTGAGGGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYLSMSTQYSGLARG*PASGPGHAQVRAAS Trigger: GGAGGCAGCCCTCACCTGCGCGTGTCCGGGACCGGACGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGGTGCTCATGCTCAAGTACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGCCTCCAGGCCTTACCCAGTACTCGGGTTaGGCGCGTGGCTGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLPPSTSSTVPGPRPPGLTQYSG*ARGWPA Trigger: CGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGGT...AAGGCCTGGAGGCCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS TCA 90 bp | ACCACAGGCCAATCCAGAAGGTGGCGAATGTGCGCTCGTCCGGGCTaGAGGACGGCTGGTAGCAGGGCACCGCGCAGTTGGGCACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTGQSRRWRMCARPG*RTAGSRAPRSWALG Trigger: GCCAAGTGCCCAACTGCGCGGTGCCCTGCTACCAGCCGTCCTTCAGCCCGGACGAGCGCACATTCGCCACCTTCTGGATTGGCCTGTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS TCA 90 bp | GCAGTTGGGCACTTGGCCGGTGCGCACCTTGTTGTAGAGTGGGTGTaGCTCCTTCAGGATGGGCACGAAGGGCTCGCGGCACGTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: AVGHLAGAHLVVEWV*LLQDGHEGLAARAH Trigger: GTGTGCACGTGCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCACACCCACTCTACAACAAGGTGCGCACCGGCCAAGTGCCCAACTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS GCA 90 bp | AGGACGGCTGGTAGCAGGGCACCGCGCAGTTGGGCACTTGGCCGGTaGGCACCTTGTTGTAGAGTGGGTGTGACTCCTTCAGGATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTAGSRAPRSWALGR*APCCRVGVTPSGWA Trigger: TGCCCATCCTGAAGGAGTCACACCCACTCTACAACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGCGGTGCCCTGCTACCAGCCGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | CTACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGAGCGCCGTAATGGACTaGACACTGGGGATGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSETTAPFNFQHCPWASSAVMD*TLGMSQ Trigger: CTGGCTCATCCCCAGTGTCAAGTCCATTACGGCGCT...CGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | GACTTGAGGGGGCTAGACACAGAAAGAGCAGATGGCCTCTGGCCTCTAAGTGTCGACAGGGACACTTGCTaGTGGTATGCGGCGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLRGLDTERADGLWPLSVDRDTC*WYAAVG Trigger: CCCCACCGCCGCATACCACAAGCAAGTGTCCCTGTC...GACACTTAGAGGCCAGAGGCCATCTGCTCTTTCTGTGTCTAGCCCCCTCAAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CAA 90 bp | TACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGTCCTGCGTGTCATGGTaGAACTGGTTGGGCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YQAKQLPPSTSSTVPGPRSCVSW*NWLGMC Trigger: GCACATGCCCAACCAGTTCAACCATGACACGCAGGA...CCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | TACCAAGCGAAACAACTGCCCCCTTCAACTTCCAGCACTGTCCCTGGGCCTCGGTCATGGTTGAACTGGTaGGGCATGTGCGTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YQAKQLPPSTSSTVPGPRSWLNW*GMCVRL Trigger: CAACCTGACGCACATGCCCAACCAGTTCAACCATGA...CCGAGGCCCAGGGACAGTGCTGGAAGTTGAAGGGGGCAGTTGTTTCGCTTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAGGTGGGCCGGAGCCGCAGATTCGAAGCAATGGGAATTTACTTTAATTACACCCAGTACTCGGGTTaGGCGCGTGGCTGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KEVGRSRRFEAMGIYFNYTQYSG*ARGWPA Trigger: CGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGGT...GTAATTAAAGTAAATTCCCATTGCTTCGAATCTGCGGCTCCGGCCCACCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCTGTTTCTTTCCCAGGATCACTTGATTGGACTTTGGCGACAAGAAAGGCCTGGGAGTGTAGGTTaGGCCGGGAAGGACTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLFLSQDHLIGLWRQERPGSVG*AGKDLG Trigger: CCCTAAGTCCTTCCCGGCCAAACCTACACTCCCAGG...CCTTTCTTGTCGCCAAAGTCCAATCAAGTGATCCTGGGAAAGAAACAGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACCGCGCAGTTGGGCACTaGGCCGGTGCGCACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISTKKVNGSDLHKATKRNRAVGH*AGAHLV Trigger: AACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGCG...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | ACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAACTGCCGCGCAGTTGGGCACTaGGCCGGTGCGCACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKKVNGSDLHKATKRNNCRAVGH*AGAHLV Trigger: AACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGCG...GCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
||
| CDS-3UTR CAA 90 bp | CTACACAAGGCTGGCGGTGCACAAGTTGCTGAACTCCCCCAAGGCTTTTCATTTTCCTGCGTGTCATGGTaGAACTGGTTGGGCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHKAGGAQVAELPQGFSFSCVSW*NWLGMC Trigger: GCACATGCCCAACCAGTTCAACCATGACACGCAGGA...AAATGAAAAGCCTTGGGGGAGTTCAGCAACTTGTGCACCGCCAGCCTTGTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACGACAGGGACACTTGCTaGTGGTATGCGGCGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISTKKVNGSDLHKATKRNDRDTC*WYAAVG Trigger: CCCCACCGCCGCATACCACAAGCAAGTGTCCCTGTC...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS-3UTR CAA 90 bp | GTACTGACTGACTCCCAGGCACAAAACCAAACCAAACGTCTCTCCAAGACGCTCTCATGGTTGAACTGGTaGGGCATGTGCGTCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VLTDSQAQNQTKRLSKTLSWLNW*GMCVRL Trigger: CAACCTGACGCACATGCCCAACCAGTTCAACCATGA...GAGCGTCTTGGAGAGACGTTTGGTTTGGTTTTGTGCCTGGGAGTCAGTCAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| CDS-3UTR CAA 90 bp | ATTCTTACTGCACGGGATAGGCACTGTACATGTATGCCAACCATGCACAGCACTAGCGCCGTAATGGACTaGACACTGGGGATGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILTARDRHCTCMPTMHSTSAVMD*TLGMSQ Trigger: CTGGCTCATCCCCAGTGTCAAGTCCATTACGGCGCT...AGTGCTGTGCATGGTTGGCATACATGTACAGTGCCTATCCCGTGCAGTAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| CDS-3UTR CAA 90 bp | CTCCAAGGCAAATGTTTAGGTCCGCTCTATAATGCCTCCTCTAACTTATTCAAGGTGCGACAGGGACACTaGCTTGTGGTATGCGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: LQGKCLGPLYNASSNLFKVRQGH*LVVCGG Trigger: ACCGCCGCATACCACAAGCAAGTGTCCCTGTCGCAC...CTTGAATAAGTTAGAGGAGGCATTATAGAGCGGACCTAAACATTTGCCTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063982.7 |
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| CDS-3UTR CAA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAGTGCGACAGGGACACTaGCTTGTGGTATGCGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PTVTSLQCQFEDYVAPKAVRQGH*LVVCGG Trigger: ACCGCCGCATACCACAAGCAAGTGTCCCTGTCGCAC...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS-3UTR CAA 90 bp | ATCAGCACCAAGAAGGTAAACGGAAGTGACCTTCACAAAGCTACCAAGCGAAACAGGCACATGAAGTACTaGAGCATGAGCACCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: ISTKKVNGSDLHKATKRNRHMKY*SMSTQY Trigger: GTACTGGGTGCTCATGCTCAAGTACTTCATGTGCCT...GTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACCTTCTTGGTGCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS-3UTR CAA 90 bp | CCAACAGTAACCTCATTACAATGCCAATTTGAGGATTATGTAGCCCCCAAAGCAAGGCACATGAAGTACTaGAGCATGAGCACCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PTVTSLQCQFEDYVAPKARHMKY*SMSTQY Trigger: GTACTGGGTGCTCATGCTCAAGTACTTCATGTGCCT...TGCTTTGGGGGCTACATAATCCTCAAATTGGCATTGTAATGAGGTTACTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS GCA 72 bp | GCCGGTGAGCGCGGCGCTGGCCTCCGCATAGTCTCCTaGGGCCATAGCGCCACCGCTCTTGTGGCCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AGERGAGLRIVS*GHSATALVAPP Trigger: CGGCGGGGCCACAAGAGCGGTGGCGCTATGGCCGCAGGAGACTATGCGGAGGCCAGCGCCGCGCTCACCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS GCA 72 bp | GGGGCCTTGGAGGCGGCCGCTGCCCGGCCCACCAGCTaGGCCAGCAACAGCAGCAGAAGAGAGGGAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GALEAAAARPTS*ASNSSRREGGA Trigger: TGCGCCTCCCTCTCTTCTGCTGCTGTTGCTGGCGCAGCTGGTGGGCCGGGCAGCGGCCGCCTCCAAGGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS GCA 72 bp | GCCAGCGTCCGGTCCCGGACACGCGCAGGTGAGGGCTaGCTCCCAGCTCTCCCGGTAGTGCTGCTCATACAG | + |
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Preference number: 6 (lower is better) Translates to: ASVRSRTRAGEG*LPALPVVLLIQ Trigger: CTGTATGAGCAGCACTACCGGGAGAGCTGGGAGGCAGCCCTCACCTGCGCGTGTCCGGGACCGGACGCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS CCA 72 bp | AGCATGAGCACCCAGTACTCGGGTTTGGCGCGTGGCTaGCCAGCGTCCGGTCCCGGACACGCGCAGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SMSTQYSGLARG*PASGPGHAQVR Trigger: CCTCACCTGCGCGTGTCCGGGACCGGACGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGGTGCTCATGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS CCA 72 bp | CTTGAGCATGAGCACCCAGTACTCGGGTTTGGCGCGTaGCTGGCCAGCGTCCGGTCCCGGACACGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LEHEHPVLGFGA*LASVRSRTRAG Trigger: ACCTGCGCGTGTCCGGGACCGGACGCTGGCCAGCCACGCGCCAAACCCGAGTACTGGGTGCTCATGCTCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS TCA 72 bp | CAATCCAGAAGGTGGCGAATGTGCGCTCGTCCGGGCTaGAGGACGGCTGGTAGCAGGGCACCGCGCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: QSRRWRMCARPG*RTAGSRAPRSW Trigger: CCAACTGCGCGGTGCCCTGCTACCAGCCGTCCTTCAGCCCGGACGAGCGCACATTCGCCACCTTCTGGATTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS GCA 72 bp | GGTAGCAGGGCACCGCGCAGTTGGGCACTTGGCCGGTaGGCACCTTGTTGTAGAGTGGGTGTGACTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GSRAPRSWALGR*APCCRVGVTPS Trigger: TGAAGGAGTCACACCCACTCTACAACAAGGTGCGCACCGGCCAAGTGCCCAACTGCGCGGTGCCCTGCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS CCA 72 bp | GCACCTTGTTGTAGAGTGGGTGTGACTCCTTCAGGATaGGCACGAAGGGCTCGCGGCACGTGCACACGGATG | + |
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Preference number: 6 (lower is better) Translates to: APCCRVGVTPSG*ARRARGTCTRM Trigger: CATCCGTGTGCACGTGCCGCGAGCCCTTCGTGCCCATCCTGAAGGAGTCACACCCACTCTACAACAAGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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| CDS CCA 72 bp | AGTGAATGTGGCTGTGCTCACGGCTGCAAGCGACGCTaGCATGGCCCACTACCAGGCGCACCAAGAATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SECGCAHGCKRR*HGPLPGAPRIP Trigger: TGGGATTCTTGGTGCGCCTGGTAGTGGGCCATGCCAGCGTCGCTTGCAGCCGTGAGCACAGCCACATTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063982.7 ENSMUST00000116133.4 |
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