RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FZD3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000007989

Ensembl transcript IDs: ENSMUST00000131309.3

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGGAGCTACAGTAGGCACTGTGAGCACAAGGGAGGGAGGAACTaGACTTGGGTCCTTTGGAAGAGCAGCAGGTCCACTTACCCACTG +
Preference number: 1 (lower is better)
Translates to: SWSYSRHCEHKGGRN*TWVLWKSSRSTYPL
Trigger: CAGTGGGTAAGTGGACCTGCTGCTCTTCCAAAGGACCCAAGTTCAGTTCCTCCCTCCCTTGTGCTCACAGTGCCTACTGTAGCTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp AGTTCCATGAGCTCAAAGCCAGCCTGGGATATACACCTAAGCCTCTaGGATCAGCCTGAGCCAGTCTGTGAGGGGGCTGGAAATGGAGCC +
Preference number: 1 (lower is better)
Translates to: SSMSSKPAWDIHLSL*DQPEPVCEGAGNGA
Trigger: GGCTCCATTTCCAGCCCCCTCACAGACTGGCTCAGGCTGATCTCAGAGGCTTAGGTGTATATCCCAGGCTGGCTTTGAGCTCATGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp TCTACTCCAGTGCTCATCCACAGCCTGCATATCTTGGGGGAAGACTaGCAGACTTTGAGACAACCTCCCACAGGCCAACCAGATCTTCCA +
Preference number: 1 (lower is better)
Translates to: STPVLIHSLHILGED*QTLRQPPTGQPDLP
Trigger: TGGAAGATCTGGTTGGCCTGTGGGAGGTTGTCTCAAAGTCTGTCAGTCTTCCCCCAAGATATGCAGGCTGTGGATGAGCACTGGAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp AAAATAAATCTACAACAGCAGAGTGCAGAGCACACCCAGCTACCGTaGCAGTACAGCCCATGCTCTAACTGGGTGTGCCCGCCCTACACA +
Preference number: 1 (lower is better)
Translates to: KINLQQQSAEHTQLP*QYSPCSNWVCPPYT
Trigger: TGTGTAGGGCGGGCACACCCAGTTAGAGCATGGGCTGTACTGTCACGGTAGCTGGGTGTGCTCTGCACTCTGCTGTTGTAGATTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp CTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCACCTTCCAACTaGGTGGGCTGGAGGAATGGCTCAGTGGTTAGAAGATCTTTCAGG +
Preference number: 1 (lower is better)
Translates to: LKGCRQSELRNPPSN*VGWRNGSVVRRSFR
Trigger: CCTGAAAGATCTTCTAACCACTGAGCCATTCCTCCAGCCCACCCAGTTGGAAGGTGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp ACTGAACTTGGGTCCTTTGGAAGAGCAGCAGGTCCACTTACCCACTaGCCTGTTTCTGCAATCCCAAGCTTTTCTCATCCTAGCTGTCAC +
Preference number: 1 (lower is better)
Translates to: TELGSFGRAAGPLTH*PVSAIPSFSHPSCH
Trigger: GTGACAGCTAGGATGAGAAAAGCTTGGGATTGCAGAAACAGGTCAGTGGGTAAGTGGACCTGCTGCTCTTCCAAAGGACCCAAGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp TACTGGGGAATCTGGGGCAGACAATCAGCTCATTATAGGAGGGCCTaGGTACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGT +
Preference number: 1 (lower is better)
Translates to: YWGIWGRQSAHYRRA*VPRSNGFGKITSHC
Trigger: ACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTACCCAGGCCCTCCTATAATGAGCTGATTGTCTGCCCCAGATTCCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp ACAGAAGTAAGTCATGGCTACCAGGAAACTGGCTCTTCTGTCATGTaGGCACTCCTAGTTTTAAAGGGCGAGAGAAGCAGACACACGAAT +
Preference number: 1 (lower is better)
Translates to: TEVSHGYQETGSSVM*ALLVLKGERSRHTN
Trigger: ATTCGTGTGTCTGCTTCTCTCGCCCTTTAAAACTAGGAGTGCCCACATGACAGAAGAGCCAGTTTCCTGGTAGCCATGACTTACTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp CTACTGATGCATACTTCGGAGAAGCAACATGACAGAAGTAAGTCATaGCTACCAGGAAACTGGCTCTTCTGTCATGTGGGCACTCCTAGT +
Preference number: 1 (lower is better)
Translates to: LLMHTSEKQHDRSKS*LPGNWLFCHVGTPS
Trigger: ACTAGGAGTGCCCACATGACAGAAGAGCCAGTTTCCTGGTAGCCATGACTTACTTCTGTCATGTTGCTTCTCCGAAGTATGCATCAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp CAAGAGGAAATGCAACAACACACACAAACTCTGGAAGCACAAAGGTaGGACTTTCATGGCAATGCTCTCTTCACTGTCTACACTTGGCCC +
Preference number: 1 (lower is better)
Translates to: QEEMQQHTQTLEAQR*DFHGNALFTVYTWP
Trigger: GGGCCAAGTGTAGACAGTGAAGAGAGCATTGCCATGAAAGTCTCACCTTTGTGCTTCCAGAGTTTGTGTGTGTTGTTGCATTTCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp AGATATGGTTCAGTGGCAGAAGGTGTGGATAATAAAAGAAAGGCCTaGTTCCACATTCGTCACAGACAGACACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: RYGSVAEGVDNKRKA*FHIRHRQTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTCTGTCTGTGACGAATGTGGAACCAGGCCTTTCTTTTATTATCCACACCTTCTGCCACTGAACCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 90 bp ACACACACAAACTCTGGAAGCACAAAGGTGAGACTTTCATGGCAATaGTCTCTTCACTGTCTACACTTGGCCCACTTTAAAAGACAACCA +
Preference number: 1 (lower is better)
Translates to: THTNSGSTKVRLSWQ*SLHCLHLAHFKRQP
Trigger: TGGTTGTCTTTTAAAGTGGGCCAAGTGTAGACAGTGAAGAGAGCATTGCCATGAAAGTCTCACCTTTGTGCTTCCAGAGTTTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp TCATGCTGTTCCCGGAGCTTCTCTGACAGAAGCTTCATGAGTTATTaGTCTGTTTATAGACAAGTTATCAGTTATAAGGGACTTTGGGCC +
Preference number: 1 (lower is better)
Translates to: SCCSRSFSDRSFMSY*SVYRQVISYKGLWA
Trigger: GGCCCAAAGTCCCTTATAACTGATAACTTGTCTATAAACAGATCAATAACTCATGAAGCTTCTGTCAGAGAAGCTCCGGGAACAGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp CAGCTACTTAAACCAAACAGTACTGTGCTGAGTGCACAGAACAAGTaGAGGATGGTACTTGGTGAAGGTGACTGTAAGGTTAACATTATC +
Preference number: 1 (lower is better)
Translates to: QLLKPNSTVLSAQNK*RMVLGEGDCKVNII
Trigger: GATAATGTTAACCTTACAGTCACCTTCACCAAGTACCATCCTTCACTTGTTCTGTGCACTCAGCACAGTACTGTTTGGTTTAAGTAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp TTCCTGGCAATCCTCTGGCCTCATTTAGCCTTGCCTCCTAAATGCTaGGATTATAGACATATATCTATCACGTTGGACTTGAAAACAACA +
Preference number: 1 (lower is better)
Translates to: FLAILWPHLALPPKC*DYRHISITLDLKTT
Trigger: TGTTGTTTTCAAGTCCAACGTGATAGATATATGTCTATAATCCCAGCATTTAGGAGGCAAGGCTAAATGAGGCCAGAGGATTGCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp TCCCTCTACTTGGTTTTTGACACGGTCTTACTATGTAGCTCAGGTTaGCCTATAATTATATACCATGCAGCACAAGATGGCCTTAAATGT +
Preference number: 1 (lower is better)
Translates to: SLYLVFDTVLLCSSG*PIIIYHAAQDGLKC
Trigger: ACATTTAAGGCCATCTTGTGCTGCATGGTATATAATTATAGGCCAACCTGAGCTACATAGTAAGACCGTGTCAAAAACCAAGTAGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp ACATGCTTAGAAGAGTATTTCCAACTATTCAGACTGAGAGAACCTTaGGCTCAAGTGTCAGAGAAATCACTCAACAACAGAGTTGTTCAC +
Preference number: 1 (lower is better)
Translates to: TCLEEYFQLFRLREP*AQVSEKSLNNRVVH
Trigger: GTGAACAACTCTGTTGTTGAGTGATTTCTCTGACACTTGAGCTCAAGGTTCTCTCAGTCTGAATAGTTGGAAATACTCTTCTAAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp AGGTACTCTCCCAATGAGCTACACTACAGCTCTACAGAATGCATTTaGTATGAGGGCTGGACTAGAAAATCTATATTCATAATTAAGAGA +
Preference number: 1 (lower is better)
Translates to: RYSPNELHYSSTECI*YEGWTRKSIFIIKR
Trigger: TCTCTTAATTATGAATATAGATTTTCTAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGGGAGAGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 90 bp AGTAAGCTGATCGAGCAAACAGAGTTTATGGGAAGACAATACAAGTaGGCTCTCAACAATGACTATAAAATGGTCAAGGGAGAAACAAAT +
Preference number: 1 (lower is better)
Translates to: SKLIEQTEFMGRQYK*ALNNDYKMVKGETN
Trigger: ATTTGTTTCTCCCTTGACCATTTTATAGTCATTGTTGAGAGCTCACTTGTATTGTCTTCCCATAAACTCTGTTTGCTCGATCAGCTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 90 bp GTGCCACAAGATACAAGTCTTCACCACAAACACTTTCTAACTAGATaGCTGTATGATAAAACAAGGTTAGGTCTAGAATTTAGTTACCTC +
Preference number: 1 (lower is better)
Translates to: VPQDTSLHHKHFLTR*LYDKTRLGLEFSYL
Trigger: GAGGTAACTAAATTCTAGACCTAACCTTGTTTTATCATACAGCCATCTAGTTAGAAAGTGTTTGTGGTGAAGACTTGTATCTTGTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGCGCATGGGGAGGCATaGCTACTCTTCCTATGCCTG +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPAHGEA*LLFLCL
Trigger: CAGGCATAGGAAGAGTAGGCATGCCTCCCCATGCGC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCACTGGGACTGAACCCATaGCCCTGTCTATTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPLGLNP*PCLLLS
Trigger: GCTCAGCAATAGACAGGGCCATGGGTTCAGTCCCAG...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTAATACACCTAAGCCTCTaGGATCAGCCTGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLIHLSL*DQPEPV
Trigger: GACTGGCTCAGGCTGATCTCAGAGGCTTAGGTGTAT...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGAGGTACTCTCCCAATaGGCTACACTACAGCTCTAC +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPEVLSQ*ATLQLY
Trigger: GTAGAGCTGTAGTGTAGCTCATTGGGAGAGTACCTC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTCCAACTGGGTGGGCTaGAGGAATGGCTCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCSNWVG*RNGSVV
Trigger: AACCACTGAGCCATTCCTCCAGCCCACCCAGTTGGA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp ACTGGTCTCCTCTCTTCACTGCTGTTTGGTTTGTGGATGTTTGTTTaGGTTTGCTCATGCTGTTCCCGGAGCTTCTCTGACAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: TGLLSSLLFGLWMFV*VCSCCSRSFSDRSF
Trigger: GAAGCTTCTGTCAGAGAAGCTCCGGGAACAGCATGAGCAAACCAAAACAAACATCCACAAACCAAACAGCAGTGAAGAGAGGAGACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp CTCACACTGGTCTCCTCTCTTCACTGCTGTTTGGTTTGTGGATGTTaGTTTTGGTTTGCTCATGCTGTTCCCGGAGCTTCTCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: LTLVSSLHCCLVCGC*FWFAHAVPGASLTE
Trigger: TTCTGTCAGAGAAGCTCCGGGAACAGCATGAGCAAACCAAAACAAACATCCACAAACCAAACAGCAGTGAAGAGAGGAGACCAGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAAGCTGTAGCCAACTaGCTACTGGGGAATCTGGGG +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFKAVAN*LLGNLG
Trigger: CCCCAGATTCCCCAGTAGCCAGTTGGCTACAGCTTT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp AGCTGGTTGTTTTTAAAGCATCAACTCAGACCTGACAGAAAGATGTaGGCTACTGAGAGTTCCAGAGTGATCTGTACCCGCAATCAGGGC +
Preference number: 2 (lower is better)
Translates to: SWLFLKHQLRPDRKM*ATESSRVICTRNQG
Trigger: GCCCTGATTGCGGGTACAGATCACTCTGGAACTCTCAGTAGCCAACATCTTTCTGTCAGGTCTGAGTTGATGCTTTAAAAACAACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp TTTAAACAAGAGGAGCTAGGCTCACGGAGGCTGACTTGTTCAAAGTaGAAAACTAGCATATGGCAAAGCCAGACCTCTCCAGAGTCTAGG +
Preference number: 2 (lower is better)
Translates to: FKQEELGSRRLTCSK*KTSIWQSQTSPESR
Trigger: CCTAGACTCTGGAGAGGTCTGGCTTTGCCATATGCTAGTTTTCAACTTTGAACAAGTCAGCCTCCGTGAGCCTAGCTCCTCTTGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAACCCCAGGGTTGATGTaGTACAAAGAGCAAAGATCT +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPTPGLM*YKEQRS
Trigger: AGATCTTTGCTCTTTGTATCACATCAACCCTGGGGT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGTCTCCTCTCTTCACTaGTGTTTGGTTTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPVSSLH*CLVCGC
Trigger: ACATCCACAAACCAAACAGCAGTGAAGAGAGGAGAC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCGATCTACTTTCCCAGTaGGCACACTCTGCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFDLLSQ*AHSAQE
Trigger: TTCTTGGGCAGAGTGTGCCCACTGGGAAAGTAGATC...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTTAGATCCCCAGAGCTaGAGCTACAGTAGGCACTGT +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFLDPQS*SYSRHC
Trigger: ACAGTGCCTACTGTAGCTCCAGCTCTGGGGATCTAA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCGTGTTACAAGTGTGTTaGTGTCAGGAGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFVLQVC*CQEARR
Trigger: CCTTCTGGCCTCCTGACACCAACACACTTGTAACAC...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTCAAAGGACAACTTGTaGGAGTCTGTTCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCSKDNL*ESVLSP
Trigger: GGGGGAGAGAACAGACTCCCACAAGTTGTCCTTTGA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGAAGACTGACAGACTTTaGGACAACCTCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLKTDRL*DNLPQA
Trigger: GGCCTGTGGGAGGTTGTCTCAAAGTCTGTCAGTCTT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCATCTTGGGGGAAGACTaGCAGACTTTGAGACAACCT +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFILGED*QTLRQP
Trigger: AGGTTGTCTCAAAGTCTGTCAGTCTTCCCCCAAGAT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACAAACAGTACTGTGCTaGGTGCACAGAACAAGTGAA +
Preference number: 2 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLQTVLC*VHRTSE
Trigger: TTCACTTGTTCTGTGCACTCAGCACAGTACTGTTTG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCAGTTCAAGGTCAGCCTaGTCTACAGAGCAAGTTCCA +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFSSRSA*STEQVP
Trigger: TGGAACTTGCTCTGTAGATCAGGCTGACCTTGAACT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCCAATTACAGGGGAATaGTCATCTCTGCCTCTACTC +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCPITGE*SSLPLL
Trigger: GAGTAGAGGCAGAGATGAGCATTCCCCTGTAATTGG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACAGTACTGTGCTGAGTaGACAGAACAAGTGAAGGAT +
Preference number: 2 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLQYCAE*TEQVKD
Trigger: ATCCTTCACTTGTTCTGTGCACTCAGCACAGTACTG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTGCCTACTCTTCCTATaGCTGTCCCAGTACTCATGT +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCCLLFL*LSQYSC
Trigger: ACATGAGTACTGGGACAGGCATAGGAAGAGTAGGCA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACAGAAAATAGGGATGTaGGCAAAAGCTGTAGCCAAC +
Preference number: 2 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLQKIGM*AKAVAN
Trigger: GTTGGCTACAGCTTTTGCCCACATCCCTATTTTCTG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACTGACAGAAAGATGTTaGCTACTGAGAGTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLLTERC*LLRVPE
Trigger: CTCTGGAACTCTCAGTAGCCAACATCTTTCTGTCAG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAAAGGTGAGACTTTCATaGCAATGCTCTCTTCACTGT +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPKVRLS*QCSLHC
Trigger: ACAGTGAAGAGAGCATTGCCATGAAAGTCTCACCTT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACTGCTCATCCACAGCCTaGATATCTTGGGGGAAGACT +
Preference number: 2 (lower is better)
Translates to: YQGLMALARSHLTVEKYDCSSTA*ISWGKT
Trigger: AGTCTTCCCCCAAGATATGCAGGCTGTGGATGAGCA...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGGGGAATGCTCATCTCTaGCTCTACTCCAGTGCTCAT +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLGNAHL*LYSSAH
Trigger: ATGAGCACTGGAGTAGAGGCAGAGATGAGCATTCCC...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCATGTTTGTTTTGGTTTaGTCATGCTGTTCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFMFVLV*SCCSRS
Trigger: GCTCCGGGAACAGCATGAGCAAACCAAAACAAACAT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTGCCAGGCATTCAAATaGTACACAGACACAGATCCA +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCCQAFK*YTDTDP
Trigger: TGGATCTGTGTCTGTGTACCATTTGAATGCCTGGCA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCGGAGGAATGGCTCAGTaGTTAGAAGATCTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCGGMAQ*LEDLSG
Trigger: TCCTGAAAGATCTTCTAACCACTGAGCCATTCCTCC...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCACTTTTGTGATGACATaGTCCTTAGGGTTTGGGATG +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFTFVMT*SLGFGM
Trigger: CATCCCAAACCCTAAGGATCATGTCATCACAAAAGT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTCCTGTGGTCAAATCTaGTGCCATCAACCTATCTTT +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCSCGQI*CHQPIF
Trigger: AAAGATAGGTTGATGGCATCAGATTTGACCACAGGA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGTTCCCGGAGCTTCTCTaGCAGAAGCTTCATGAGTTA +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLFPELL*QKLHEL
Trigger: TAACTCATGAAGCTTCTGTCAGAGAAGCTCCGGGAA...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGTGTCTTATGAAGAATaGGTAATCTCTACTGATGCA +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPVSYEE*VISTDA
Trigger: TGCATCAGTAGAGATTACCCATTCTTCATAAGACAC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAAGCAAACAGAGTTTATaGGAAGACAATACAAGTGAG +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPSKQSL*EDNTSE
Trigger: CTCACTTGTATTGTCTTCCCATAAACTCTGTTTGCT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAAACACTAATGAAAGCTaGAAAAACCTGACAGCCTTT +
Preference number: 2 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPNTNES*KNLTAF
Trigger: AAAGGCTGTCAGGTTTTTCCAGCTTTCATTAGTGTT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp AATCAGCTCATTATAGGAGGGCCTGGGTACCAAGGTCTAATGGCTTaGGCAAGATCACATCTCACTGTAGAAAAATACGACAATGAATAC +
Preference number: 2 (lower is better)
Translates to: NQLIIGGPGYQGLMA*ARSHLTVEKYDNEY
Trigger: GTATTCATTGTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTACCCAGGCCCTCCTATAATGAGCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGACCCGCAATCAGGGCTaGGGATCACTTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLTRNQG*GSLIFS
Trigger: AGAAAATATAAGTGATCCTCAGCCCTGATTGCGGGT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCCTGCCTTTGATTTATTaGGTAAGACTCTCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFLPLIY*VRLSRE
Trigger: CTCTCTAGAGAGTCTTACTCAATAAATCAAAGGCAG...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCGGAAGACAATACAAGTaGGCTCTCAACAATGACTAT +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFGRQYK*ALNNDY
Trigger: ATAGTCATTGTTGAGAGCTCACTTGTATTGTCTTCC...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGCCACTGACCTGTTTCTaGAATCCCAAGCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLPLTCF*NPKLFS
Trigger: TGAGAAAAGCTTGGGATTGCAGAAACAGGTCAGTGG...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCAAATTAGAGTCTGGTaGAATCTGAGACTCCTAATC +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCQIRVW*NLRLLI
Trigger: GATTAGGAGTCTCAGATTCCACCAGACTCTAATTTG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCAGATATCAGCTTTCCTaGCTCAAAAATCCTTGGATA +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFRYQLS*LKNPWI
Trigger: TATCCAAGGATTTTTGAGTCAGGAAAGCTGATATCT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCAAAGCCAGGACAAATaGACAATAACAAGTCACATT +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCQSQDK*TITSHI
Trigger: AATGTGACTTGTTATTGTTCATTTGTCCTGGCTTTG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCAATCATCTAAAAGTCTaGAAATTTGAGCAAGCCCGA +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFNHLKV*KFEQAR
Trigger: TCGGGCTTGCTCAAATTTGCAGACTTTTAGATGATT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGTTGAAAACTAGCATATaGCAAAGCCAGACCTCTCCA +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLLKTSI*QSQTSP
Trigger: TGGAGAGGTCTGGCTTTGCCATATGCTAGTTTTCAA...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCTCTTCACTGCTGTTTaGTTTGTGGATGTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCLFTAV*FVDVCF
Trigger: AAAACAAACATCCACAAACCAAACAGCAGTGAAGAG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGAACACACACAAACTCTaGAAGCACAAAGGTGAGACT +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLNTHKL*KHKGET
Trigger: AGTCTCACCTTTGTGCTTCCAGAGTTTGTGTGTGTT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGCAAGTGAGATTTCCTTaGTCCAATTCATGTAAAGCG +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLQVRFP*SNSCKA
Trigger: CGCTTTACATGAATTGGATCAAGGAAATCTCACTTG...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCGAAGAGATGTACAAATaGCAATGCATTTCCATATAC +
Preference number: 2 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCEEMYK*QCISIY
Trigger: GTATATGGAAATGCATTGGCATTTGTACATCTCTTC...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTCGCTAAACATTTACTaGAAAGCTTACTCTGTACTA +
Preference number: 2 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFSLNIY*KAYSVL
Trigger: TAGTACAGAGTAAGCTTTCCAGTAAATGTTTAGCGA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp GCCAACCAGATCTTCCATGGCACTGTTATCTTAGCTAAAATACTCTaGCTGGCTTATCAAAGTCTTCTACAGTTTAAAAACGGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: ANQIFHGTVILAKIL*LAYQSLLQFKNGSF
Trigger: AAAGGAACCGTTTTTAAACTGTAGAAGACTTTGATAAGCCAGCAAGAGTATTTTAGCTAAGATAACAGTGCCATGGAAGATCTGGTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 90 bp TTTTTGAGCAAGCATGGACAGTATTCACCTGTAAATTTCCTGTCATaGAGCAGAGCTGTCAATGTTTATGTGTTTGGTTCTCTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: FLSKHGQYSPVNFLS*SRAVNVYVFGSLSA
Trigger: TGCTGAAAGAGAACCAAACACATAAACATTGACAGCTCTGCTCAATGACAGGAAATTTACAGGTGAATACTGTCCATGCTTGCTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACACCCCTTATAATGTGTaGTGCTTATTTTACTGCATG +
Preference number: 2 (lower is better)
Translates to: YQGLMALARSHLTVEKYDTPYNV*CLFYCM
Trigger: CATGCAGTAAAATAAGCATCACACATTATAAGGGGT...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR GCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGTATGGTAATATTCTCTaGAAAGCCAGGACAAATGAA +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLYGNIL*KARTNE
Trigger: TTCATTTGTCCTGGCTTTGCAGAGAATATTACCATA...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGATTTGGTATGAGGGCTaGACTAGAAAATCTATATTC +
Preference number: 2 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLIWYEG*TRKSIF
Trigger: GAATATAGATTTTCTAGTCCAGCCCTCATACCAAAT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp CTACAACAGCAGAGTGCAGAGCACACCCAGCTACCGTaGCAGTACAGCCCATGCTCTAACTGGGTGTGCCCG +
Preference number: 3 (lower is better)
Translates to: LQQQSAEHTQLP*QYSPCSNWVCP
Trigger: CGGGCACACCCAGTTAGAGCATGGGCTGTACTGTCACGGTAGCTGGGTGTGCTCTGCACTCTGCTGTTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp CCAACACTGTCAGGCACGGCAGCAAGTGCCAGTACCTaGCACGTCATCTCACTGGCCCCAGGAGAATTAAGG +
Preference number: 3 (lower is better)
Translates to: PTLSGTAASAST*HVISLAPGELR
Trigger: CCTTAATTCTCCTGGGGCCAGTGAGATGACGTGGCAGGTACTGGCACTTGCTGCCGTGCCTGACAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TCAGGAGGCCAGAAGGGAATGTTAGATCCCCAGAGCTaGAGCTACAGTAGGCACTGTGAGCACAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SGGQKGMLDPQS*SYSRHCEHKGG
Trigger: CCCTCCCTTGTGCTCACAGTGCCTACTGTAGCTCCAGCTCTGGGGATCTAACATTCCCTTCTGGCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp CCAAGGTCTGGTGAGCTGGAACACTTGCCGAATATATaGAAGGCTCTGGTAGCAGGCAAGGCCCTAGTCCCA +
Preference number: 3 (lower is better)
Translates to: PRSGELEHLPNI*KALVAGKALVP
Trigger: TGGGACTAGGGCCTTGCCTGCTACCAGAGCCTTGCATATATTCGGCAAGTGTTCCAGCTCACCAGACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GGCATGTCTGAAATCCCAGCACTTGCCTGGCAAGGGTaGGAGTTCCATGAGCTCAAAGCCAGCCTGGGATAT +
Preference number: 3 (lower is better)
Translates to: GMSEIPALAWQG*EFHELKASLGY
Trigger: ATATCCCAGGCTGGCTTTGAGCTCATGGAACTCTCACCCTTGCCAGGCAAGTGCTGGGATTTCAGACATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp GTATATAGCTCACTGGTAGAATGGCTGCCTAGCACATaGTTGTTCACCAGAACCAAAGGGGATGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: VYSSLVEWLPST*LFTRTKGDGRG
Trigger: GCCCCTCCCATCCCCTTTGGTTCTGGTGAACAAGCATGTGCTAGGCAGCCATTCTACCAGTGAGCTATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp CACCTTCCAACTGGGTGGGCTGGAGGAATGGCTCAGTaGTTAGAAGATCTTTCAGGACTGGGGTTAGATTCC +
Preference number: 3 (lower is better)
Translates to: HLPTGWAGGMAQ*LEDLSGLGLDS
Trigger: GGAATCTAACCCCAGTCCTGAAAGATCTTCTAACCACTGAGCCATTCCTCCAGCCCACCCAGTTGGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TGCAGACAGTCAGAGCTAAGAAACCCACCTTCCAACTaGGTGGGCTGGAGGAATGGCTCAGTGGTTAGAAGA +
Preference number: 3 (lower is better)
Translates to: CRQSELRNPPSN*VGWRNGSVVRR
Trigger: TCTTCTAACCACTGAGCCATTCCTCCAGCCCACCCAGTTGGAAGGTGGGTTTCTTAGCTCTGACTGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GGGTCCTTTGGAAGAGCAGCAGGTCCACTTACCCACTaGCCTGTTTCTGCAATCCCAAGCTTTTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: GSFGRAAGPLTH*PVSAIPSFSHP
Trigger: AGGATGAGAAAAGCTTGGGATTGCAGAAACAGGTCAGTGGGTAAGTGGACCTGCTGCTCTTCCAAAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp ATTACAGGGGAATGCTCATCTCTGCCTCTACTCCAGTaGTCATCCACAGCCTGCATATCTTGGGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: ITGECSSLPLLQ*SSTACISWGKT
Trigger: AGTCTTCCCCCAAGATATGCAGGCTGTGGATGAGCACTGGAGTAGAGGCAGAGATGAGCATTCCCCTGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp AGTCTAGCGCATGGGGAGGCATGCCTACTCTTCCTATaGCTGTCCCAGTACTCATGTGGCTGTAACAACAAA +
Preference number: 3 (lower is better)
Translates to: SLAHGEACLLFL*LSQYSCGCNNK
Trigger: TTTGTTGTTACAGCCACATGAGTACTGGGACAGGCATAGGAAGAGTAGGCATGCCTCCCCATGCGCTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp ATCTGGGGCAGACAATCAGCTCATTATAGGAGGGCCTaGGTACCAAGGTCTAATGGCTTTGGCAAGATCACA +
Preference number: 3 (lower is better)
Translates to: IWGRQSAHYRRA*VPRSNGFGKIT
Trigger: TGTGATCTTGCCAAAGCCATTAGACCTTGGTACCCAGGCCCTCCTATAATGAGCTGATTGTCTGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp AGTCATGGCTACCAGGAAACTGGCTCTTCTGTCATGTaGGCACTCCTAGTTTTAAAGGGCGAGAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: SHGYQETGSSVM*ALLVLKGERSR
Trigger: TCTGCTTCTCTCGCCCTTTAAAACTAGGAGTGCCCACATGACAGAAGAGCCAGTTTCCTGGTAGCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp CAAAACCCAATCCAATTACAGGGGAATGCTCATCTCTaGCTCTACTCCAGTGCTCATCCACAGCCTGCATAT +
Preference number: 3 (lower is better)
Translates to: QNPIQLQGNAHL*LYSSAHPQPAY
Trigger: ATATGCAGGCTGTGGATGAGCACTGGAGTAGAGGCAGAGATGAGCATTCCCCTGTAATTGGATTGGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TGCAGATGGTGGCAGATGACATCTTTGAGCTCACACTaGTCTCCTCTCTTCACTGCTGTTTGGTTTGTGGAT +
Preference number: 3 (lower is better)
Translates to: CRWWQMTSLSSH*SPLFTAVWFVD
Trigger: ATCCACAAACCAAACAGCAGTGAAGAGAGGAGACCAGTGTGAGCTCAAAGATGTCATCTGCCACCATCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TGTTTATGTGTGTGCATGTGCACTACAACCCGCATGTaGAGGTCAAAGGACAACTTGTGGGAGTCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: CLCVCMCTTTRM*RSKDNLWESVL
Trigger: GAGAACAGACTCCCACAAGTTGTCCTTTGACCTCCACATGCGGGTTGTAGTGCACATGCACACACATAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAAGTGAAGGATGGTACTaGGTGAAGGTGACTGTAAGG +
Preference number: 3 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPSEGWY*VKVTVR
Trigger: CCTTACAGTCACCTTCACCAAGTACCATCCTTCACT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GCACTCACCGAATCACATGCCTATGATGTTACTAAGTaGTATGACCCTATGGGACCACTGCTGTATGGACAG +
Preference number: 3 (lower is better)
Translates to: ALTESHAYDVTK*YDPMGPLLYGQ
Trigger: CTGTCCATACAGCAGTGGTCCCATAGGGTCATATCACTTAGTAACATCATAGGCATGTGATTCGGTGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TCAGTGGCAGAAGGTGTGGATAATAAAAGAAAGGCCTaGTTCCACATTCGTCACAGACAGACACACACACAC +
Preference number: 3 (lower is better)
Translates to: SVAEGVDNKRKA*FHIRHRQTHTH
Trigger: GTGTGTGTGTGTCTGTCTGTGACGAATGTGGAACCAGGCCTTTCTTTTATTATCCACACCTTCTGCCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp ATTTTTGAAAACAGGGTCTTGTTATGTAGCTCAGCCTaGCCGTCAGTTCCTGGCAATCCTCTGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: IFENRVLLCSSA*PSVPGNPLASF
Trigger: AAATGAGGCCAGAGGATTGCCAGGAACTGACGGCCAGGCTGAGCTACATAACAAGACCCTGTTTTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACAAGGTCTAATGGCTTaGGCAAGATCACATCTCACT +
Preference number: 3 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLQGLMA*ARSHLT
Trigger: AGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp ATCCTTAGGGTTTGGGATGTGTTCACACCCCAGGGTTaGTGTGATACAAAGAGCAAAGATCTACTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: ILRVWDVFTPQG*CDTKSKDLLSQ
Trigger: CTGGGAAAGTAGATCTTTGCTCTTTGTATCACATCAACCCTGGGGTGTGAACACATCCCAAACCCTAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp CAAAGGGACCGGTGCTGTCAGCGATCTGTTCATCACTaGTTTTATTTTGAACACATGCTAGGGAGGTACTCT +
Preference number: 3 (lower is better)
Translates to: QRDRCCQRSVHH*FYFEHMLGRYS
Trigger: AGAGTACCTCCCTAGCATGTGTTCAAAATAAAATCAGTGATGAACAGATCGCTGACAGCACCGGTCCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp CTGTTTGGTTTGTGGATGTTTGTTTTGGTTTGCTCATaGTGTTCCCGGAGCTTCTCTGACAGAAGCTTCATG +
Preference number: 3 (lower is better)
Translates to: LFGLWMFVLVCS*CSRSFSDRSFM
Trigger: CATGAAGCTTCTGTCAGAGAAGCTCCGGGAACAGCATGAGCAAACCAAAACAAACATCCACAAACCAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp CGGAGGCTGACTTGTTCAAAGTTGAAAACTAGCATATaGCAAAGCCAGACCTCTCCAGAGTCTAGGGTATAT +
Preference number: 3 (lower is better)
Translates to: RRLTCSKLKTSI*QSQTSPESRVY
Trigger: ATATACCCTAGACTCTGGAGAGGTCTGGCTTTGCCATATGCTAGTTTTCAACTTTGAACAAGTCAGCCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp GACTTTCATGGCAATGCTCTCTTCACTGTCTACACTTaGCCCACTTTAAAAGACAACCAACTAGCACTTGGC +
Preference number: 3 (lower is better)
Translates to: DFHGNALFTVYT*PTLKDNQLALG
Trigger: GCCAAGTGCTAGTTGGTTGTCTTTTAAAGTGGGCCAAGTGTAGACAGTGAAGAGAGCATTGCCATGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGAGGTCAAAGGACAACTaGTGGGAGTCTGTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLRSKDN*WESVLS
Trigger: GGAGAGAACAGACTCCCACAAGTTGTCCTTTGACCT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp TTAAAAGACAACCAACTAGCACTTGGCAATAGGCAGTaGTGCAGATGGTGGCAGATGACATCTTTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: LKDNQLALGNRQ*CRWWQMTSLSS
Trigger: TGAGCTCAAAGATGTCATCTGCCACCATCTGCATCACTGCCTATTGCCAAGTGCTAGTTGGTTGTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp ATGCAACAACACACACAAACTCTGGAAGCACAAAGGTaGGACTTTCATGGCAATGCTCTCTTCACTGTCTAC +
Preference number: 3 (lower is better)
Translates to: MQQHTQTLEAQR*DFHGNALFTVY
Trigger: GTAGACAGTGAAGAGAGCATTGCCATGAAAGTCTCACCTTTGTGCTTCCAGAGTTTGTGTGTGTTGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp AAACCAAACAGTACTGTGCTGAGTGCACAGAACAAGTaGAGGATGGTACTTGGTGAAGGTGACTGTAAGGTT +
Preference number: 3 (lower is better)
Translates to: KPNSTVLSAQNK*RMVLGEGDCKV
Trigger: AACCTTACAGTCACCTTCACCAAGTACCATCCTTCACTTGTTCTGTGCACTCAGCACAGTACTGTTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GGAAGGAAGGAAAAATATAAGCTGATGTTAAGTACATaGGAAGCTCACGACTGCAACCTTGGCACTCAGGAG +
Preference number: 3 (lower is better)
Translates to: GRKEKYKLMLST*EAHDCNLGTQE
Trigger: CTCCTGAGTGCCAAGGTTGCAGTCGTGAGCTTCTCATGTACTTAACATCAGCTTATATTTTTCCTTCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp GACATCTTTGAGCTCACACTGGTCTCCTCTCTTCACTaGTGTTTGGTTTGTGGATGTTTGTTTTGGTTTGCT +
Preference number: 3 (lower is better)
Translates to: DIFELTLVSSLH*CLVCGCLFWFA
Trigger: AGCAAACCAAAACAAACATCCACAAACCAAACAGCAGTGAAGAGAGGAGACCAGTGTGAGCTCAAAGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp CCATATACGCATCACCACTACCAAAGCAAGAGGAAATaGAACAACACACACAAACTCTGGAAGCACAAAGGT +
Preference number: 3 (lower is better)
Translates to: PYTHHHYQSKRK*NNTHKLWKHKG
Trigger: ACCTTTGTGCTTCCAGAGTTTGTGTGTGTTGTTGCATTTCCTCTTGCTTTGGTAGTGGTGATGCGTATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp GCAATCCTCTGGCCTCATTTAGCCTTGCCTCCTAAATaGTGGGATTATAGACATATATCTATCACGTTGGAC +
Preference number: 3 (lower is better)
Translates to: AILWPHLALPPK*WDYRHISITLD
Trigger: GTCCAACGTGATAGATATATGTCTATAATCCCAGCATTTAGGAGGCAAGGCTAAATGAGGCCAGAGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TGTGGGGCCAAATGCTCACATGTGTCTTATGAAGAATaGGTAATCTCTACTGATGCATACTTCGGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: CGAKCSHVSYEE*VISTDAYFGEA
Trigger: TGCTTCTCCGAAGTATGCATCAGTAGAGATTACCCATTCTTCATAAGACACATGTGAGCATTTGGCCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TCTGTTTATAGACAAGTTATCAGTTATAAGGGACTTTaGGCCTCTCCAAGTGGTAACCCCAGTTCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: SVYRQVISYKGL*ASPSGNPSSKE
Trigger: CTCCTTGGAACTGGGGTTACCACTTGGAGAGGCCCAAAGTCCCTTATAACTGATAACTTGTCTATAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGCCTGACAGAAAGATGTaGGCTACTGAGAGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLPDRKM*ATESSR
Trigger: TCTGGAACTCTCAGTAGCCAACATCTTTCTGTCAGG...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTATTGGTTTGTGGATGTTaGTTTTGGTTTGCTCATGCT +
Preference number: 3 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLLVCGC*FWFAHA
Trigger: AGCATGAGCAAACCAAAACAAACATCCACAAACCAA...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTATCACTGCTGTTTGGTTaGTGGATGTTTGTTTTGGTT +
Preference number: 3 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLSLLFG*WMFVLV
Trigger: AACCAAAACAAACATCCACAAACCAAACAGCAGTGA...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCTTCACTGTCTACACTaGGCCCACTTTAAAAGACAA +
Preference number: 3 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCLHCLH*AHFKRQ
Trigger: TTGTCTTTTAAAGTGGGCCAAGTGTAGACAGTGAAG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp TCTGTCTTAGCCTCTCAAGAGACTGGGATTCCAGTGTaGGTCCCCACACTTAGCTTAAACAAACATTTTCAT +
Preference number: 3 (lower is better)
Translates to: SVLASQETGIPV*VPTLSLNKHFH
Trigger: ATGAAAATGTTTGTTTAAGCTAAGTGTGGGGACTCACACTGGAATCCCAGTCTCTTGAGAGGCTAAGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp TATAATAGTTCCTACAAAGGAAATAAGCCAGCACGATaGTCCAGGCTCTATAAACTGTACTCTGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: YNSSYKGNKPAR*SRLYKLYSGSW
Trigger: CCAGCTTCCAGAGTACAGTTTATAGAGCCTGGAGCATCGTGCTGGCTTATTTCCTTTGTAGGAACTATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp TCTAAGTTCTTTAGACTTTATAATCAATCTGGGCAGTaGTGGCACATAACTTTAAGCCTCTCACGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SKFFRLYNQSGQ*WHITLSLSRGR
Trigger: CCTCCCACGTGAGAGGCTTAAAGTTATGTGCCACCACTGCCCAGATTGATTATAAAGTCTAAAGAACTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCACCTGAAAAGCTGGTaGTTTTTAAAGCATCAACTC +
Preference number: 3 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCHLKSW*FLKHQL
Trigger: GAGTTGATGCTTTAAAAACAACCAGCTTTTCAGGTG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTAAGAGCTTCCAGACTGTaGTTTTCATTTGATCTCAAT +
Preference number: 3 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLRASRL*FSFDLN
Trigger: ATTGAGATCAAATGAAAACAACAGTCTGGAAGCTCT...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp AAATTGAACAGCTACTTAAACCAAACAGTACTGTGCTaGGTGCACAGAACAAGTGAAGGATGGTACTTGGTG +
Preference number: 3 (lower is better)
Translates to: KLNSYLNQTVLC*VHRTSEGWYLV
Trigger: CACCAAGTACCATCCTTCACTTGTTCTGTGCACTCAGCACAGTACTGTTTGGTTTAAGTAGCTGTTCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR GCA 72 bp TACTCTCCCAATGAGCTACACTACAGCTCTACAGAATaGATTTGGTATGAGGGCTGGACTAGAAAATCTATA +
Preference number: 3 (lower is better)
Translates to: YSPNELHYSSTE*IWYEGWTRKSI
Trigger: TATAGATTTTCTAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGGGAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGAGAGCATGGCCCAAATaGAACAGCTACTTAAACCAA +
Preference number: 3 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLRAWPK*NSYLNQ
Trigger: TTGGTTTAAGTAGCTGTTCAATTTGGGCCATGCTCT...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCACATATTCAATGAAGTaGAGGAGGCAGTTAAAGAGT +
Preference number: 3 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCTYSMK*RRQLKS
Trigger: ACTCTTTAACTGCCTCCTCAACTTCATTGAATATGT...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR-3UTR CAA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGTCTCTTCACTGCTGTTaGGTTTGTGGATGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLSLHCC*VCGCLF
Trigger: AAACAAACATCCACAAACCAAACAGCAGTGAAGAGA...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp ACCAGTACATCAACCTATACCTACTTCCTAATGCTATaGACTCATCAGACTTCAGTCTCAACTGTACACTGT +
Preference number: 3 (lower is better)
Translates to: TSTSTYTYFLML*THQTSVSTVHC
Trigger: ACAGTGTACAGTTGAGACTGAAGTCTGATGAGTTCATAGCATTAGGAAGTAGGTATAGGTTGATGTACTGGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GATAACAAAATCCACATTTATTCAGCTTCCAGAGTCTaGATGCCTTTCCCCTTCTCCCTCTACTTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: DNKIHIYSASRV*MPFPFSLYLVF
Trigger: AAAAACCAAGTAGAGGGAGAAGGGGAAAGGCATTCAGACTCTGGAAGCTGAATAAATGTGGATTTTGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GAAGAGTATTTCCAACTATTCAGACTGAGAGAACCTTaGGCTCAAGTGTCAGAGAAATCACTCAACAACAGA +
Preference number: 3 (lower is better)
Translates to: EEYFQLFRLREP*AQVSEKSLNNR
Trigger: TCTGTTGTTGAGTGATTTCTCTGACACTTGAGCTCAAGGTTCTCTCAGTCTGAATAGTTGGAAATACTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp CCCAATGAGCTACACTACAGCTCTACAGAATGCATTTaGTATGAGGGCTGGACTAGAAAATCTATATTCATA +
Preference number: 3 (lower is better)
Translates to: PNELHYSSTECI*YEGWTRKSIFI
Trigger: TATGAATATAGATTTTCTAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp ATACACATTTGTGAAATCCTACTGCCTTTGATTTATTaGGTAAGACTCTCTAGAGAGGAGAGCCGAGAATTC +
Preference number: 3 (lower is better)
Translates to: IHICEILLPLIY*VRLSREESREF
Trigger: GAATTCTCGGCTCTCCTCTCTAGAGAGTCTTACTCAATAAATCAAAGGCAGTAGGATTTCACAAATGTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp TCCCGGAGCTTCTCTGACAGAAGCTTCATGAGTTATTaGTCTGTTTATAGACAAGTTATCAGTTATAAGGGA +
Preference number: 3 (lower is better)
Translates to: SRSFSDRSFMSY*SVYRQVISYKG
Trigger: TCCCTTATAACTGATAACTTGTCTATAAACAGATCAATAACTCATGAAGCTTCTGTCAGAGAAGCTCCGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp ATCGAGCAAACAGAGTTTATGGGAAGACAATACAAGTaGGCTCTCAACAATGACTATAAAATGGTCAAGGGA +
Preference number: 3 (lower is better)
Translates to: IEQTEFMGRQYK*ALNNDYKMVKG
Trigger: TCCCTTGACCATTTTATAGTCATTGTTGAGAGCTCACTTGTATTGTCTTCCCATAAACTCTGTTTGCTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp GTGTCAGAGAAATCACTCAACAACAGAGTTGTTCACTaGGACAAGAAAGTAAGAGACAGCTCATTAATATGG +
Preference number: 3 (lower is better)
Translates to: VSEKSLNNRVVH*DKKVRDSSLIW
Trigger: CCATATTAATGAGCTGTCTCTTACTTTCTTGTCTCAGTGAACAACTCTGTTGTTGAGTGATTTCTCTGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp CACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTaGACTAGAAAATCTATATTCATAATTAAGAGAACA +
Preference number: 3 (lower is better)
Translates to: HYSSTECIWYEG*TRKSIFIIKRT
Trigger: TGTTCTCTTAATTATGAATATAGATTTTCTAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR TCA 72 bp CTTGACATTGTGACAGTATGTCAGCTTATAAAAGCTTaGAAATCAAACACAGACTTAGTGAAGAGCTTATGT +
Preference number: 3 (lower is better)
Translates to: LDIVTVCQLIKA*KSNTDLVKSLC
Trigger: ACATAAGCTCTTCACTAAGTCTGTGTTTGATTTTCAAGCTTTTATAAGCTGACATACTGTCACAATGTCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CCA 72 bp AGAAAATCTTTAGATGAAAGCTTACAGAACATGTGTTaGCTGTATAGCATGGCATTCATTTATTTTGGAGGA +
Preference number: 3 (lower is better)
Translates to: RKSLDESLQNMC*LYSMAFIYFGG
Trigger: TCCTCCAAAATAAATGAATGCCATGCTATACAGCCAACACATGTTCTGTAAGCTTTCATCTAAAGATTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp TATAGCTCACTGGTAGAATGGCTGCCTAGCACATGCTaGTTCACCAGAACCAAAGGGGATGGGAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: YSSLVEWLPSTC*FTRTKGDGRGN
Trigger: GTTGCCCCTCCCATCCCCTTTGGTTCTGGTGAACAAGCATGTGCTAGGCAGCCATTCTACCAGTGAGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGTGACCTGTGGAGGCTaGCATGGTAGCTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPVTCGG*HGSCSL
Trigger: AAGTGAGCAGCTACCATGGCAGCCTCCACAGGTCAC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTACCTCTGCACTGCAACTaGGGCTCCTTCAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLPLHCN*GSFSWI
Trigger: GATCCAACTGAAGGAGCCCCAGTTGCAGTGCAGAGG...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGGATGCCCCAGGCACTaGCATGAAACAGCAATGCTT +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPGCPRH*HETAML
Trigger: AAGCATTGCTGTTTCATGCCAGTGCCTGGGGCATCC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGAGAACTACTGTGCCTaGAATGATCCGTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPENYCA*NDPSAV
Trigger: CACGGCTGACGGATCATTCCAGGCACAGTAGTTCTC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTGGGTCCCTCAGGAGTaGCTGAGCAAAGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFWVPQE*LSKVRF
Trigger: GAACCTGACTTTGCTCAGTCACTCCTGAGGGACCCA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCCGTGACATGCTGCCGTaGGGTAGTCTCTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFRDMLP*GSLSSI
Trigger: AATGGAGGAGAGACTACCTCACGGCAGCATGTCACG...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTTAGAGTTCCGGGGATaGCCCAGGCACTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCLEFRG*PRHWHE
Trigger: TTCATGCCAGTGCCTGGGGCATCCCCGGAACTCTAA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTGCTCGTTGAGCCGATaGGAACTACTGTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFCSLSR*ELLCLE
Trigger: TTCCAGGCACAGTAGTTCTCATCGGCTCAACGAGCA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCTGTGCCCACCTATCTaGCCCAGAAACACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCLCPPI*PRNTVK
Trigger: CTTGACTGTGTTTCTGGGGCAGATAGGTGGGCACAG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCCGTCAGCCGTGACATaGTGCCGTGAGGTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDPSAVT*CREVVS
Trigger: AGAGACTACCTCACGGCAGCATGTCACGGCTGACGG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTCTCTGCAGCGTTCCTaGATCCATGTTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCSLQRS*IHVVSQ
Trigger: CTGGGAGACAACATGGATCCAGGAACGCTGCAGAGA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTACGGCAGGGAAGTGTaGCACGTCCATATTCCATAC +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCYGREV*HVHIPY
Trigger: GTATGGAATATGGACGTGTCACACTTCCCTGCCGTA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGTACAGGCCTTATTGTaGGATCCTTGTGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPVQALL*DPCVTV
Trigger: TACAGTGACACAAGGATCTCACAATAAGGCCTGTAC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTACGGACATGGAATGTaGTACTCTCTGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFYGHGM*YSLQRS
Trigger: GGAACGCTGCAGAGAGTATCACATTCCATGTCCGTA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCTCTGGACGACTCATCTaGGTAACCTGGTACGGACAT +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFSGRLI*VTWYGH
Trigger: ATGTCCGTACCAGGTTACTCAGATGAGTCGTCCAGA...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTATGTGTGGATGTCCCTTaGGTGGAAGTTCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLCVDVP*VEVPLD
Trigger: ATCAAGAGGAACTTCCACTCAAGGGACATCCACACA...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACGTCGGGACTGCTCGTTaGGCCGATGAGAACTACTGT +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDVGTAR*ADENYC
Trigger: ACAGTAGTTCTCATCGGCTCAACGAGCAGTCCCGAC...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCTGTGCAGGGCTAGATaGATTGCAGGCTACTCGGTC +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDLCRAR*IAGYSV
Trigger: GACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCATGTTGTCTCCCAGATaGCGCGGTAAGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCMLSPR*RGKLAH
Trigger: ATGAGCAAGCTTACCGCGGCATCTGGGAGACAACAT...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp TCTGAATGCCTTTCCCCTTCTCCCTCTACTTGGTTTTaGACACGGTCTTACTATGTAGCTCAGGTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SECLSPSPSTWF*TRSYYVAQVGL
Trigger: TAGGCCAACCTGAGCTACATAGTAAGACCGTGTCAAAAACCAAGTAGAGGGAGAAGGGGAAAGGCATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCCCCAGGCACTGGCATaGAACAGCAATGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDPQALA*NSNAFF
Trigger: GAAGAAAGCATTGCTGTTTCATGCCAGTGCCTGGGG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACTCCACCATGGCCAGCTaGGTTGAAGAAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDSTMAS*VEEACV
Trigger: CACACATGCTTCTTCAACTCAGCTGGCCATGGTGGA...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGGGTTCCTGGAGCACCTaGCGGCTCTCATTCACTATC +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMGSWST*RLSFTI
Trigger: GATAGTGAATGAGAGCCGGCAGGTGCTCCAGGAACC...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGGGCTGCCATGGTAGCTaGTCACTTTGCTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMGCHGS*SLCCGH
Trigger: GTGTCCACAGCAAAGTGAGCAGCTACCATGGCAGCC...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCCATTCCTCGGTAACTaGAGGGAGTGTACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDPFLGN*RECTCH
Trigger: ATGGCAGGTACACTCCCTGCAGTTACCGAGGAATGG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGTCAGCCGTGACATGCTaGCGTGAGGTAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMSAVTC*REVVSP
Trigger: AGGAGAGACTACCTCACGGCAGCATGTCACGGCTGA...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTATGGCTCATCACAATCTaGAAACCTACTGCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLWLITI*KPTALH
Trigger: ATGGAGTGCAGTAGGTTTCCAGATTGTGATGAGCCA...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCTTTGGTCATCCACCATaGCCAGCTGAGTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCFGHPP*PAELKK
Trigger: CTTCTTCAACTCAGCTGGCCATGGTGGATGACCAAA...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCATTGAAATCAGGCCTATaGAATAGCGAGCAAATGACA +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPLKSGL*NSEQMT
Trigger: TGTCATTTGCTCGCTATTTCATAGGCCTGATTTCAA...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCTCCCTCAGGAGTGACTaGGCAAAGTCAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: YISAVNQSNSENRDVGKSSLRSD*AKSGSW
Trigger: CCAGGAACCTGACTTTGCTCAGTCACTCCTGAGGGA...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGGCATGAAACAGCAATaGTTTCTTCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPGMKQQ*FLLNSF
Trigger: GAAGCTATTGAGAAGAAAGCATTGCTGTTTCATGCC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAAATTACAACCAAGAGTaGCACAAGGTAGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPNYNQE*HKVENA
Trigger: AGCATTCTCTACCTTGTGCCACTCTTGGTTGTAATT...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp ATTATAGGAGGGCCTGGGTACCAAGGTCTAATGGCTTaGGCAAGATCACATCTCACTGTAGAAAAATACGAC +
Preference number: 4 (lower is better)
Translates to: IIGGPGYQGLMA*ARSHLTVEKYD
Trigger: GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTACCCAGGCCCTCCTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCGAAATAGCGAGCAAATaGCAGTTCTTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCEIASK*QFFSPE
Trigger: TTCAGGAGAGAAGAACTGTCATTTGCTCGCTATTTC...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGGCTGTGGACACTCCCTaGTTTGCTTCTTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMAVDTP*FASLVI
Trigger: GATGACCAAAGAAGCAAAGCAGGGAGTGTCCACAGC...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCGGTAGCTGCTCACTTTaGTGTGGACACTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: YISAVNQSNSENRDVGKSGSCSL*CGHSLL
Trigger: AAGCAGGGAGTGTCCACAGCAAAGTGAGCAGCTACC...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp GAGGTGTACCAAGTCTCTACTGAAATCAAAGTACCTTaGTCTAACACAAGAATGCATCGAGAACTGAGACGC +
Preference number: 4 (lower is better)
Translates to: EVYQVSTEIKVP*SNTRMHRELRR
Trigger: GCGTCTCAGTTCTCGATGCATTCTTGTGTTAGACAAAGGTACTTTGATTTCAGTAGAGACTTGGTACACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp AACTGTACACTGTATGTCTACAGTCCAAGGCATTCAAGATGTCTGAAGGGATGCCACCAATCCGGATCATaGACTTCACTAACTTATCTT +
Preference number: 4 (lower is better)
Translates to: NCTLYVYSPRHSRCLKGCHQSGS*TSLTYL
Trigger: AAGATAAGTTAGTGAAGTTCATGATCCGGATTGGTG...GCATCCCTTCAGACATCTTGAATGCCTTGGACTGTAGACATACAGTGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCCATGGCCAGCTGAGTTaGAGAAGCATGTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: YISAVNQSNSENRDVGKSHGQLS*RSMCGC
Trigger: ACATCCACACATGCTTCTTCAACTCAGCTGGCCATG...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACAATCTGGAAACCTACTaGACTCCATATCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDNLETY*TPYLQA
Trigger: GGCCTGAAGATATGGAGTGCAGTAGGTTTCCAGATT...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCACATCATGTAGCAGACTaGATAAAATATGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPHHVAD*IKYDRS
Trigger: AGACCTATCATATTTTATGCAGTCTGCTACATGATG...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR GCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACAGAAGCCTTATACTGTaGAGGGCTAGATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDRSLIL*RARCIA
Trigger: TGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCT...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGAGGTTCACCATAGGGTaGAAGGGCTCCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMRFTIG*KGSIAK
Trigger: TTTAGCAATGGAGCCCTTCCACCCTATGGTGAACCT...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCCTGCTCACTTTGCTGTaGACACTCCCTGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: YISAVNQSNSENRDVGKSLLTLL*TLPALL
Trigger: AAGCAAAGCAGGGAGTGTCCACAGCAAAGTGAGCAG...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCACCAAACATCTCCATaGGTTTTGAACACTCGCTAT +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDHQTSP*VLNTRY
Trigger: ATAGCGAGTGTTCAAAACTCATGGAGATGTTTGGTG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACACAGTTCTTCTCTCCTaGAGTACATATTGGGACATG +
Preference number: 4 (lower is better)
Translates to: YQGLMALARSHLTVEKYDTVLLS*STYWDM
Trigger: CATGTCCCAATATGTACTTCAGGAGAGAAGAACTGT...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCCCAGCAAAAACCCAATaGAGAAAATTAATGACACCA +
Preference number: 4 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFPAKTQ*RKLMTP
Trigger: TGGTGTCATTAATTTTCTTCATTGGGTTTTTGCTGG...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGGAGTGCACAAAGAAATaGCCGAAAATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMECTKK*PKIPRT
Trigger: TGTTCTCGGGATTTTCGGCCATTTCTTTGTGCACTC...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCCACAAGTCGGGGATATaGCTCATCACAATCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YISAVNQSNSENRDVGKSHKSGI*LITIWK
Trigger: TTTCCAGATTGTGATGAGCCATATCCCCGACTTGTG...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGAAAGAGAATCAGGTCTaGACGACTCATCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMKENQV*TTHLSN
Trigger: GTTACTCAGATGAGTCGTCCAGACCTGATTCTCTTT...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR TCA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGGGTAACGGAATCTTGTaGCGTCAATTAGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: MLTRQSSLHSLERITFVMGNGIL*RQLERL
Trigger: TAACCTTTCTAATTGACGTCACAAGATTCCGTTACC...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp ACTGCATGCCTCCACAGAACATATATGAACATGAAGTaGTCTACTATTTCCTGGGAAAAATGGCCACAAATT +
Preference number: 4 (lower is better)
Translates to: TACLHRTYMNMK*STISWEKWPQI
Trigger: AATTTGTGGCCATTTTTCCCAGGAAATAGTAGACAACTTCATGTTCATATATGTTCTGTGGAGGCATGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp TCTGTGGCAATCTGCAACTACACATATTCAATGAAGTaGAGGAGGCAGTTAAAGAGTTCTATTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: SVAICNYTYSMK*RRQLKSSIPFL
Trigger: GAGAAATGGAATAGAACTCTTTAACTGCCTCCTCAACTTCATTGAATATGTGTAGTTGCAGATTGCCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CCA 90 bp GGACTTCATAGTCAATGTATGCAACAACAAGGACTTGTAAGAGCCAGAAAACTGCAATTTTTAACTCTCTaGGACACCAAAAACCATAGT +
Preference number: 4 (lower is better)
Translates to: GLHSQCMQQQGLVRARKLQFLTL*DTKNHS
Trigger: ACTATGGTTTTTGGTGTCCCAGAGAGTTAAAAATTG...CAGTTTTCTGGCTCTTACAAGTCCTTGTTGTTGCATACATTGACTATGAAGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
3UTR CAA 72 bp ATCTTCCATGGCACTGTTATCTTAGCTAAAATACTCTaGCTGGCTTATCAAAGTCTTCTACAGTTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: IFHGTVILAKIL*LAYQSLLQFKN
Trigger: GTTTTTAAACTGTAGAAGACTTTGATAAGCCAGCAAGAGTATTTTAGCTAAGATAACAGTGCCATGGAAGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp GCCGATGAGAACTACTGTGCCTGGAATGATCCGTCAGCCGTGACATaGTGCCGTGAGGTAGTCTCTCCTCCATTCCTCGGTAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: ADENYCAWNDPSAVT*CREVVSPPFLGNCR
Trigger: CCTGCAGTTACCGAGGAATGGAGGAGAGACTACCTCACGGCAGCATGTCACGGCTGACGGATCATTCCAGGCACAGTAGTTCTCATCGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp GATGAGAACTACTGTGCCTGGAATGATCCGTCAGCCGTGACATGCTaGCGTGAGGTAGTCTCTCCTCCATTCCTCGGTAACTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DENYCAWNDPSAVTC*REVVSPPFLGNCRE
Trigger: CTCCCTGCAGTTACCGAGGAATGGAGGAGAGACTACCTCACGGCAGCATGTCACGGCTGACGGATCATTCCAGGCACAGTAGTTCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 90 bp CTCCATATCTTCAGGCCACGGGACACCAAACATCTCCATGAGTTTTaGACACTCGCTATAGGCACGCTGACACAGCCTACGGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LHIFRPRDTKHLHEF*TLAIGTLTQPTAGK
Trigger: CTTCCCTGCCGTAGGCTGTGTCAGCGTGCCTATAGCGAGTGTTCAAAACTCATGGAGATGTTTGGTGTCCCGTGGCCTGAAGATATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 90 bp CCATCCTCCTCAATAACACGGTTCATGCTGGTGCCATGTGTAATGTaGGTCATGGGGTTGTTACTGAGGTCTCGGATGCTGCTGTGTCGG +
Preference number: 5 (lower is better)
Translates to: PSSSITRFMLVPCVM*VMGLLLRSRMLLCR
Trigger: CCGACACAGCAGCATCCGAGACCTCAGTAACAACCCCATGACTCACATTACACATGGCACCAGCATGAACCGTGTTATTGAGGAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 90 bp CTTTGCTGTGGACACTCCCTGCTTTGCTTCTTTGGTCATCCACCATaGCCAGCTGAGTTGAAGAAGCATGTGTGGATGTCCCTTGAGTGG +
Preference number: 5 (lower is better)
Translates to: LCCGHSLLCFFGHPP*PAELKKHVWMSLEW
Trigger: CCACTCAAGGGACATCCACACATGCTTCTTCAACTCAGCTGGCCATGGTGGATGACCAAAGAAGCAAAGCAGGGAGTGTCCACAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCGCAGGGCTAGATGCATaGCAGGCTACTCGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFAGLDA*QATRSS
Trigger: GGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGC...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CCAATGAGCTACACTACAGCTCTACAGAATGCATTTGGTATGAGGGCTGGACTAGTTCCTGGATCCATGTaGTCTCCCAGATGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: PMSYTTALQNAFGMRAGLVPGSM*SPRCRG
Trigger: ACCGCGGCATCTGGGAGACAACATGGATCCAGGAAC...TAGTCCAGCCCTCATACCAAATGCATTCTGTAGAGCTGTAGTGTAGCTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCAGGTGGAAGGGCTCCATaGCTAAAGCTGCAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPGGRAP*LKLQSV
Trigger: AACAGACTGCAGCTTTAGCAATGGAGCCCTTCCACC...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp GGCCTTATTGTGAGATCCTTGTGTCACTGTAGAAGCCTTATACTGTaGAGGGCTAGATGCATTGCAGGCTACTCGGTCCTCCAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: GLIVRSLCHCRSLIL*RARCIAGYSVLQQK
Trigger: TTTTTGCTGGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCTACAGTGACACAAGGATCTCACAATAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 90 bp CTTGATTTTCTTATAATTGGAGTATTTGGGTCCCTCAGGAGTGACTaGGCAAAGTCAGGTTCCTGGAGCACCTGCCGGCTCTCATTCACT +
Preference number: 5 (lower is better)
Translates to: LDFLIIGVFGSLRSD*AKSGSWSTCRLSFT
Trigger: AGTGAATGAGAGCCGGCAGGTGCTCCAGGAACCTGACTTTGCTCAGTCACTCCTGAGGGACCCAAATACTCCAATTATAAGAAAATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp AGATCCTTGTGTCACTGTAGAAGCCTTATACTGTGCAGGGCTAGATaGATTGCAGGCTACTCGGTCCTCCAGCAAAAACCCAATGAAGAA +
Preference number: 5 (lower is better)
Translates to: RSLCHCRSLILCRAR*IAGYSVLQQKPNEE
Trigger: TTCTTCATTGGGTTTTTGCTGGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCTACAGTGACACAAGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp TGTGATACTCTCTGCAGCGTTCCTGGATCCATGTTGTCTCCCAGATaGCGCGGTAAGCTTGCTCATAAAAGTAACATCCAATTACAACCA +
Preference number: 5 (lower is better)
Translates to: CDTLCSVPGSMLSPR*RGKLAHKSNIQLQP
Trigger: TGGTTGTAATTGGATGTTACTTTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAGGAACGCTGCAGAGAGTATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 90 bp TCTTGGCACATCCTCAAGGTTATAGGTTCACAAGAAAACAAACTGTaGCCACCTATCTGCCCCAGAAACACAGTCAAGAGCCAAAGATCA +
Preference number: 5 (lower is better)
Translates to: SWHILKVIGSQENKL*PPICPRNTVKSQRS
Trigger: TGATCTTTGGCTCTTGACTGTGTTTCTGGGGCAGATAGGTGGGCACAGTTTGTTTTCTTGTGAACCTATAACCTTGAGGATGTGCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 90 bp ACGTCCATATTCCATACAAATAGGGGCATAGAGTGCACAAAGAAATaGCCGAAAATCCCGAGAACAATCCAGGTTCACCATAGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: TSIFHTNRGIECTKK*PKIPRTIQVHHRVE
Trigger: TTCCACCCTATGGTGAACCTGGATTGTTCTCGGGATTTTCGGCCATTTCTTTGTGCACTCTATGCCCCTATTTGTATGGAATATGGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCGATGCCGCGGTAAGCTaGCTCATAAAAGTAACATCC +
Preference number: 5 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFDAAVS*LIKVTS
Trigger: GGATGTTACTTTTATGAGCAAGCTTACCGCGGCATC...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 90 bp AACTATGAGAGCCATGAGATACTTCATCAGAAAGAGAATCAGGTCTaGACGACTCATCTGAGTAACCTGGTACGGACATGGAATGTGATA +
Preference number: 5 (lower is better)
Translates to: NYESHEILHQKENQV*TTHLSNLVRTWNVI
Trigger: TATCACATTCCATGTCCGTACCAGGTTACTCAGATGAGTCGTCCAGACCTGATTCTCTTTCTGATGAAGTATCTCATGGCTCTCATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp TACCAAGGTCTAATGGCTTTGGCAAGATCACATCTCACTGTAGAAAAATACGACCTGGGGCTCCTTCAGTaGGATCTCCAACTAAATTCA +
Preference number: 5 (lower is better)
Translates to: YQGLMALARSHLTVEKYDLGLLQ*DLQLNS
Trigger: TGAATTTAGTTGGAGATCCAACTGAAGGAGCCCCAG...GTCGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCATTAGACCTTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCCTTATTGTGAGATCCTaGTGTCACTGTAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFLIVRS*CHCRSL
Trigger: AAGGCTTCTACAGTGACACAAGGATCTCACAATAAG...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CCAAGGCATTCAAGATGTCTGAAGGGATGCAGACAGTCAGAGCTAAGAAACCCACACACGCCACTAATATaGTCACCTTCAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: PRHSRCLKGCRQSELRNPHTPLI*SPSILF
Trigger: GAATAAAATTGAAGGTGACAATATTAGTGGCGTGTG...TGGGTTTCTTAGCTCTGACTGTCTGCATCCCTTCAGACATCTTGAATGCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp TATATTTCAGCTGTAAACCAGAGTAATTCAGAAAATAGGGATGTGGGCAAAAGCCCATGGCCAGCTGAGTaGAAGAAGCATGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: YISAVNQSNSENRDVGKSPWPAE*KKHVWM
Trigger: CATCCACACATGCTTCTTCAACTCAGCTGGCCATGG...GCTTTTGCCCACATCCCTATTTTCTGAATTACTCTGGTTTACAGCTGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 90 bp GCGGTAAGCTTGCTCATAAAAGTAACATCCAATTACAACCAAGAGTaGCACAAGGTAGAGAATGCTGAAAACACCAATCCGGATCATGAA +
Preference number: 5 (lower is better)
Translates to: AVSLLIKVTSNYNQE*HKVENAENTNPDHE
Trigger: TTCATGATCCGGATTGGTGTTTTCAGCATTCTCTACCTTGTGCCACTCTTGGTTGTAATTGGATGTTACTTTTATGAGCAAGCTTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp CTCATCAGACTTCAGTCTCAACTGTACACTGTATGTCTACAGTCCAAGGCATTCATTGTAAGGCAAATCTaGGCACATCCTCAAGGTTAT +
Preference number: 5 (lower is better)
Translates to: LIRLQSQLYTVCLQSKAFIVRQI*AHPQGY
Trigger: ATAACCTTGAGGATGTGCCAAGATTTGCCTTACAAT...GAATGCCTTGGACTGTAGACATACAGTGTACAGTTGAGACTGAAGTCTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS-3UTR CAA 90 bp ATGCTCACCAGACAATCATCTCTTCACAGCCTAGAAAGAATTACTTTTGTGATGCTCCTGAAGTACATATaGGGACATGGTGGCGAACAA +
Preference number: 5 (lower is better)
Translates to: MLTRQSSLHSLERITFVMLLKYI*GHGGEQ
Trigger: TTGTTCGCCACCATGTCCCAATATGTACTTCAGGAG...CATCACAAAAGTAATTCTTTCTAGGCTGTGAAGAGATGATTGTCTGGTGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 72 bp TACTGTGCCTGGAATGATCCGTCAGCCGTGACATGCTaGCGTGAGGTAGTCTCTCCTCCATTCCTCGGTAAC +
Preference number: 6 (lower is better)
Translates to: YCAWNDPSAVTC*REVVSPPFLGN
Trigger: GTTACCGAGGAATGGAGGAGAGACTACCTCACGGCAGCATGTCACGGCTGACGGATCATTCCAGGCACAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 72 bp AACTACTGTGCCTGGAATGATCCGTCAGCCGTGACATaGTGCCGTGAGGTAGTCTCTCCTCCATTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: NYCAWNDPSAVT*CREVVSPPFLG
Trigger: ACCGAGGAATGGAGGAGAGACTACCTCACGGCAGCATGTCACGGCTGACGGATCATTCCAGGCACAGTAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 72 bp GTGACCTGTGGAGGCTGCCATGGTAGCTGCTCACTTTaGTGTGGACACTCCCTGCTTTGCTTCTTTGGTCAT +
Preference number: 6 (lower is better)
Translates to: VTCGGCHGSCSL*CGHSLLCFFGH
Trigger: ATGACCAAAGAAGCAAAGCAGGGAGTGTCCACAGCAAAGTGAGCAGCTACCATGGCAGCCTCCACAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 72 bp TTCAGGCCACGGGACACCAAACATCTCCATGAGTTTTaGACACTCGCTATAGGCACGCTGACACAGCCTACG +
Preference number: 6 (lower is better)
Translates to: FRPRDTKHLHEF*TLAIGTLTQPT
Trigger: CGTAGGCTGTGTCAGCGTGCCTATAGCGAGTGTTCAAAACTCATGGAGATGTTTGGTGTCCCGTGGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 72 bp CTTATAATTGGAGTATTTGGGTCCCTCAGGAGTGACTaGGCAAAGTCAGGTTCCTGGAGCACCTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: LIIGVFGSLRSD*AKSGSWSTCRL
Trigger: GAGCCGGCAGGTGCTCCAGGAACCTGACTTTGCTCAGTCACTCCTGAGGGACCCAAATACTCCAATTATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 72 bp TGTCACTGTAGAAGCCTTATACTGTGCAGGGCTAGATaGATTGCAGGCTACTCGGTCCTCCAGCAAAAACCC +
Preference number: 6 (lower is better)
Translates to: CHCRSLILCRAR*IAGYSVLQQKP
Trigger: GGGTTTTTGCTGGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCTACAGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS GCA 72 bp CTCTGCAGCGTTCCTGGATCCATGTTGTCTCCCAGATaGCGCGGTAAGCTTGCTCATAAAAGTAACATCCAA +
Preference number: 6 (lower is better)
Translates to: LCSVPGSMLSPR*RGKLAHKSNIQ
Trigger: TTGGATGTTACTTTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAGGAACGCTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp CATAGTCCCTCTGCACTGCAACTGGGGCTCCTTCAGTaGGATCTCCAACTAAATTCAAATCCACAAGTCGGG +
Preference number: 6 (lower is better)
Translates to: HSPSALQLGLLQ*DLQLNSNPQVG
Trigger: CCCGACTTGTGGATTTGAATTTAGTTGGAGATCCAACTGAAGGAGCCCCAGTTGCAGTGCAGAGGGACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp ACTGTAGAAGCCTTATACTGTGCAGGGCTAGATGCATaGCAGGCTACTCGGTCCTCCAGCAAAAACCCAATG +
Preference number: 6 (lower is better)
Translates to: TVEALYCAGLDA*QATRSSSKNPM
Trigger: CATTGGGTTTTTGCTGGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCTACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp GAATGTGATACTCTCTGCAGCGTTCCTGGATCCATGTaGTCTCCCAGATGCCGCGGTAAGCTTGCTCATAAA +
Preference number: 6 (lower is better)
Translates to: ECDTLCSVPGSM*SPRCRGKLAHK
Trigger: TTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAGGAACGCTGCAGAGAGTATCACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 90 bp GCAGCGTTCCTGGATCCATGTTGTCTCCCAGATGCCGCGGTAAGCTaGCTCATAAAAGTAACATCCAATTACAACCAAGAGTGGCACAAG +
Preference number: 6 (lower is better)
Translates to: AAFLDPCCLPDAAVS*LIKVTSNYNQEWHK
Trigger: CTTGTGCCACTCTTGGTTGTAATTGGATGTTACTTTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAGGAACGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 90 bp ACGGACATGGAATGTGATACTCTCTGCAGCGTTCCTGGATCCATGTaGTCTCCCAGATGCCGCGGTAAGCTTGCTCATAAAAGTAACATC +
Preference number: 6 (lower is better)
Translates to: TDMECDTLCSVPGSM*SPRCRGKLAHKSNI
Trigger: GATGTTACTTTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAGGAACGCTGCAGAGAGTATCACATTCCATGTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 72 bp ATAGTTAGAGTTCCGGGGATGCCCCAGGCACTGGCATaGAACAGCAATGCTTTCTTCTCAATAGCTTCACTG +
Preference number: 6 (lower is better)
Translates to: IVRVPGMPQALA*NSNAFFSIASL
Trigger: CAGTGAAGCTATTGAGAAGAAAGCATTGCTGTTTCATGCCAGTGCCTGGGGCATCCCCGGAACTCTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 72 bp TTTTCTTATAATTGGAGTATTTGGGTCCCTCAGGAGTaGCTGAGCAAAGTCAGGTTCCTGGAGCACCTGCCG +
Preference number: 6 (lower is better)
Translates to: FSYNWSIWVPQE*LSKVRFLEHLP
Trigger: CGGCAGGTGCTCCAGGAACCTGACTTTGCTCAGTCACTCCTGAGGGACCCAAATACTCCAATTATAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 72 bp CAGTTCTTCTCTCCTGAAGTACATATTGGGACATGGTaGCGAACAATCTCGCACGTGCAGAAAGGAATAGCC +
Preference number: 6 (lower is better)
Translates to: QFFSPEVHIGTW*RTISHVQKGIA
Trigger: GGCTATTCCTTTCTGCACGTGCGAGATTGTTCGCCACCATGTCCCAATATGTACTTCAGGAGAGAAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp CGAGCAAATGACAGTTCTTCTCTCCTGAAGTACATATaGGGACATGGTGGCGAACAATCTCGCACGTGCAGA +
Preference number: 6 (lower is better)
Translates to: RANDSSSLLKYI*GHGGEQSRTCR
Trigger: TCTGCACGTGCGAGATTGTTCGCCACCATGTCCCAATATGTACTTCAGGAGAGAAGAACTGTCATTTGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 90 bp CCTTGTGTCACTGTAGAAGCCTTATACTGTGCAGGGCTAGATGCATaGCAGGCTACTCGGTCCTCCAGCAAAAACCCAATGAAGAAAATT +
Preference number: 6 (lower is better)
Translates to: PCVTVEALYCAGLDA*QATRSSSKNPMKKI
Trigger: AATTTTCTTCATTGGGTTTTTGCTGGAGGACCGAGTAGCCTGCAATGCATCTAGCCCTGCACAGTATAAGGCTTCTACAGTGACACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 72 bp AGCCATGAGATACTTCATCAGAAAGAGAATCAGGTCTaGACGACTCATCTGAGTAACCTGGTACGGACATGG +
Preference number: 6 (lower is better)
Translates to: SHEILHQKENQV*TTHLSNLVRTW
Trigger: CCATGTCCGTACCAGGTTACTCAGATGAGTCGTCCAGACCTGATTCTCTTTCTGATGAAGTATCTCATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp CATAAAGAGCATGGTACAGGCCTTATTGTGAGATCCTaGTGTCACTGTAGAAGCCTTATACTGTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: HKEHGTGLIVRS*CHCRSLILCRA
Trigger: AGCCCTGCACAGTATAAGGCTTCTACAGTGACACAAGGATCTCACAATAAGGCCTGTACCATGCTCTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp CTGGATCCATGTTGTCTCCCAGATGCCGCGGTAAGCTaGCTCATAAAAGTAACATCCAATTACAACCAAGAG +
Preference number: 6 (lower is better)
Translates to: LDPCCLPDAAVS*LIKVTSNYNQE
Trigger: CTCTTGGTTGTAATTGGATGTTACTTTTATGAGCAAGCTTACCGCGGCATCTGGGAGACAACATGGATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 72 bp TTCCATACAAATAGGGGCATAGAGTGCACAAAGAAATaGCCGAAAATCCCGAGAACAATCCAGGTTCACCAT +
Preference number: 6 (lower is better)
Translates to: FHTNRGIECTKK*PKIPRTIQVHH
Trigger: ATGGTGAACCTGGATTGTTCTCGGGATTTTCGGCCATTTCTTTGTGCACTCTATGCCCCTATTTGTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS TCA 72 bp TATAGTACCATAAAGAGCATGGTACAGGCCTTATTGTaGGATCCTTGTGTCACTGTAGAAGCCTTATACTGT +
Preference number: 6 (lower is better)
Translates to: YSTIKSMVQALL*DPCVTVEALYC
Trigger: ACAGTATAAGGCTTCTACAGTGACACAAGGATCTCACAATAAGGCCTGTACCATGCTCTTTATGGTACTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 72 bp TTGCTCATAAAAGTAACATCCAATTACAACCAAGAGTaGCACAAGGTAGAGAATGCTGAAAACACCAATCCG +
Preference number: 6 (lower is better)
Translates to: LLIKVTSNYNQE*HKVENAENTNP
Trigger: CGGATTGGTGTTTTCAGCATTCTCTACCTTGTGCCACTCTTGGTTGTAATTGGATGTTACTTTTATGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 90 bp ATGGTTCAGAAGATTAGGCATGAAGGTAGTATTGTAAGGCAAATCTaGGCACATCCTCAAGGTTATAGGTTCACAAGAAAACAAACTGTG +
Preference number: 6 (lower is better)
Translates to: MVQKIRHEGSIVRQI*AHPQGYRFTRKQTV
Trigger: CACAGTTTGTTTTCTTGTGAACCTATAACCTTGAGGATGTGCCAAGATTTGCCTTACAATACTACCTTCATGCCTAATCTTCTGAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CCA 72 bp ACACCAATCCGGATCATGAACTTCACTAACTTATCTTaGTTTTCCTTTTCTAATGGGATCTCAATCCGAACT +
Preference number: 6 (lower is better)
Translates to: TPIRIMNFTNLS*FSFSNGISIRT
Trigger: AGTTCGGATTGAGATCCCATTAGAAAAGGAAAACCAAGATAAGTTAGTGAAGTTCATGATCCGGATTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3
CDS CAA 72 bp AAGATTAGGCATGAAGGTAGTATTGTAAGGCAAATCTaGGCACATCCTCAAGGTTATAGGTTCACAAGAAAA +
Preference number: 6 (lower is better)
Translates to: KIRHEGSIVRQI*AHPQGYRFTRK
Trigger: TTTTCTTGTGAACCTATAACCTTGAGGATGTGCCAAGATTTGCCTTACAATACTACCTTCATGCCTAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131309.3