Pregenerated sensors for FZD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050288Ensembl transcript IDs: ENSMUST00000057893.7
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAAGCGAGCAGGCTAGGTaGCTCTCCCAGCAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SFHRPLVGEEACKFSFYRSEQAR*LSQQAQ Trigger: CTGGGCCTGCTGGGAGAGGCACCTAGCCTGCTCGCT...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCGAGGGAACCCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGCACAAAGCGTTTTGTTaGCCATTCTCTGCGCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QARGNPCLLETGILTLTKHKAFC*PFSARG Trigger: CCCACGCGCAGAGAATGGGCAACAAAACGCTTTGTG...CTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGGGTTCCCTCGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR-3UTR CCA 90 bp | CTATTTATTATCAAGAAACAGGAGAGACGGTTGAGAGCGGAGCTCTGGCACACTATGCCTGCTGGAAACTaGGATTCTCACACTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: LFIIKKQERRLRAELWHTMPAGN*DSHTNK Trigger: TTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCAT...AGTGTGCCAGAGCTCCGCTCTCAACCGTCTCTCCTGTTTCTTGATAATAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR-3UTR GCA 90 bp | CTATTTATTATCAAGAAACAGGAGAGACGGTTGAGAGCGGAGCTCTGGCACACTGTCGGTGAGGAGGCTTaGAAATTTAGCTTTTATAGA | + |
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Preference number: 2 (lower is better) Translates to: LFIIKKQERRLRAELWHTVGEEA*KFSFYR Trigger: TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGAC...AGTGTGCCAGAGCTCCGCTCTCAACCGTCTCTCCTGTTTCTTGATAATAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR-3UTR TCA 90 bp | CCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACAAGCTTTTATAGAAGTTaGGTGGAACTAACTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: PCLLETGILTLTKILYRTSFYRS*VELTPN Trigger: GTTGGGAGTTAGTTCCACTCAACTTCTATAAAAGCT...TGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR CCA 72 bp | CTCCTGAGTGAAGGAGGGCACGGTGCAGTCCGGACCTaGGAGAGGGGAAAGCCCGGCAGGCAGGCGAGACCG | + |
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Preference number: 3 (lower is better) Translates to: LLSEGGHGAVRT*ERGKPGRQARP Trigger: CGGTCTCGCCTGCCTGCCGGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCACTCAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR GCA 72 bp | GGGGGATGTCAAGACACACTACACAAAGCGTTTTGTTaGCCATTCTCTGCGCGTGGGCCAGAGCTGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: GGCQDTLHKAFC*PFSARGPELKP Trigger: TGGTTTCAGCTCTGGCCCACGCGCAGAGAATGGGCAACAAAACGCTTTGTGTAGTGTGTCTTGACATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR GCA 72 bp | GCAAGCTGTAAAGTACTCCAGGCTCGAGGGAACCCATaGCTGCTGGAAACTGGGATTCTCACACTAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: ASCKVLQARGNP*LLETGILTLTK Trigger: CTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGGGTTCCCTCGAGCCTGGAGTACTTTACAGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR TCA 72 bp | TTGCACTATTTATTATCAAGAAACAGGAGAGACGGTTaGGAGCGGAGCTCTGGCACACTGGTCTTCAGATCG | + |
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Preference number: 3 (lower is better) Translates to: LHYLLSRNRRDG*ERSSGTLVFRS Trigger: CGATCTGAAGACCAGTGTGCCAGAGCTCCGCTCTCAACCGTCTCTCCTGTTTCTTGATAATAAATAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR TCA 72 bp | GGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAAGTTaGGTGGAACTAACTCCCAACTCCTTTAAGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: GEEACKFSFYRS*VELTPNSFKPT Trigger: TGTTGGCTTAAAGGAGTTGGGAGTTAGTTCCACTCAACTTCTATAAAAGCTAAATTTGCAAGCCTCCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | GTGAAGGAGGGCACGGTGCAGTCCGGACCTGGGAGAGGGGAAAGCCCGGCAGGCCCTGCTCCAGCACTGTaGACACCGGCGCGTACATGG | + |
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Preference number: 4 (lower is better) Translates to: VKEGTVQSGPGRGESPAGPAPAL*TPARTW Trigger: CCATGTACGCGCCGGTGTGCACAGTGCTGGAGCAGG...GCCTGCCGGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | GTGAAGGAGGGCACGGTGCAGTCCGGACCTGGGAGAGGGGAAAGCCCGGCAGGCGGATGGCTAGGCTCTTaGAGTGCTGGCTTACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VKEGTVQSGPGRGESPAGGWLGS*SAGLPR Trigger: CCTGGGTAAGCCAGCACTGCAAGAGCCTAGCCATCC...GCCTGCCGGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGAGTGAAGGAGGGCACGGTGCAGTCCGGACCTGGGAGAGGGGAAAGCCCAAGGGTGCTCCAGAGTaGCGTAACGCGGTGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLSEGGHGAVRTWERGKPKGAPE*RNAVAS Trigger: GCTCGCCACCGCGTTACGCCACTCTGGAGCACCCTT...GGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCACTCAGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR TCA 90 bp | GTGAAGGAGGGCACGGTGCAGTCCGGACCTGGGAGAGGGGAAAGCCCGGCAGGCCATGCCGGCTGTTGGTaGGACGAGTGTAGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: VKEGTVQSGPGRGESPAGHAGCW*DECRTS Trigger: GGAAGTTCTACACTCGTCTCACCAACAGCCGGCATG...GCCTGCCGGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGATTCTCCCCGTGGAACTaGGCCGGTCCGGCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRFSPWN*AGPAAG Trigger: GCCGGCCGCCGGACCGGCCCAGTTCCACGGGGAGAA...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | CAGGCTCGAGGGAACCCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATGCCCTTCTCCCCGTaGAACTGGGCCGGTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QARGNPCLLETGILTLTKMPFSP*NWAGPA Trigger: CGCCGGACCGGCCCAGTTCCACGGGGAGAAGGGCAT...CTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGGGTTCCCTCGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR TCA 90 bp | AGATCCCAGGGTTTGCCAACACAGAGGCTAGCGGTACCCCCAAAACCCAGGGAACGCAATGTAGGCCACTaGCACCATGGTGTAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSQGLPTQRLAVPPKPRERNVGH*HHGVAA Trigger: GGCTGCTACACCATGGTGTCAGTGGCCTACATTGCG...TTCCCTGGGTTTTGGGGGTACCGCTAGCCTCTGTGTTGGCAAACCCTGGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | CAGGCTCGAGGGAACCCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGGGTCCGGGATGGAGATaGCCTTCTCCCCGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QARGNPCLLETGILTLTKGPGWR*PSPRGT Trigger: AGTTCCACGGGGAGAAGGGCATCTCCATCCCGGACC...CTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGGGTTCCCTCGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR TCA 90 bp | AGATCCCAGGGTTTGCCAACACAGAGGCTAGCGGTACCCCCAAAACCCAGGGAAGCGATAACCGTCCTCTaGGAAGCGCTCATTGCATAC | + |
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Preference number: 4 (lower is better) Translates to: RSQGLPTQRLAVPPKPREAITVL*EALIAY Trigger: GTATGCAATGAGCGCTTCTCAGAGGACGGTTATCGC...TTCCCTGGGTTTTGGGGGTACCGCTAGCCTCTGTGTTGGCAAACCCTGGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | CAGGCTCGAGGGAACCCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGTGCCCTGCACCACCGTaGGATAACCGTCCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QARGNPCLLETGILTLTKCPAPP*DNRPLR Trigger: TCTCAGAGGACGGTTATCGCACGGTGGTGCAGGGCA...CTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGGGTTCCCTCGAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAGCTCCGTCCTCCGAGTaGTTCTGGCCCACGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRAPSSE*FWPTQI Trigger: GATCTGCGTGGGCCAGAACCACTCGGAGGACGGAGC...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGATCCTCCGAGTGGTTCTaGCCCACGCAGATCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRSSEWF*PTQICS Trigger: GGAGCAGATCTGCGTGGGCCAGAACCACTCGGAGGA...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | AACCCACACATAACACACAACCCAATCCTACAAACAGCTAACCTGGATCCCACCAGGACGCGGGGACAGTaGAAAGGGTGCTCCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: NPHITHNPILQTANLDPTRTRGQ*KGCSRV Trigger: CACTCTGGAGCACCCTTTCCACTGTCCCCGCGTCCT...GGTGGGATCCAGGTTAGCTGTTTGTAGGATTGGGTTGTGTGTTATGTGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR TCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAACAACACCGACCATGTaGGGATCCAGAGACGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRTTPTM*GSRDGQ Trigger: TTGCCCGTCTCTGGATCCTCACATGGTCGGTGTTGT...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAAGGCCACTGACACCATaGTGTAGCAGCCGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRRPLTP*CSSRTE Trigger: TTCTGTCCGGCTGCTACACCATGGTGTCAGTGGCCT...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR TCA 90 bp | CCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACAAAGGTGGCGCGGTGGTaGGTAGCGCAGGAGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PCLLETGILTLTKILYRTKVARW*VAQELR Trigger: ACGGAGCTCCTGCGCTACTCACCACCGCGCCACCTT...TGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | AGCTTCCACAGGCCCCTCGTCGGTGAGGAGGCTTGCAAATTTAGCTTTTATAGAAAACGAGTCTCCTCTTaGGAGAAGAACATAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SFHRPLVGEEACKFSFYRKRVSS*EKNIEP Trigger: CGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTT...TCTATAAAAGCTAAATTTGCAAGCCTCCTCACCGACGAGGGGCCTGTGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | ATTTGCACTATTTATTATCAAGAAACAGGAGAGACGGTTGAGAGCGGAGCTCTGCATACCACGCGCTCCTaGAGAACGAAGCCCGCAATG | + |
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Preference number: 4 (lower is better) Translates to: ICTIYYQETGETVESGALHTTRS*RTKPAM Trigger: CATTGCGGGCTTCGTTCTCCAGGAGCGCGTGGTATG...CAGAGCTCCGCTCTCAACCGTCTCTCCTGTTTCTTGATAATAAATAGTGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CCA 90 bp | CCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACAAGGCTCTTGCAGTGCTaGCTTACCCAGGAGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCLLETGILTLTKILYRTRLLQC*LTQERS Trigger: GGAGCGCTCCTGGGTAAGCCAGCACTGCAAGAGCCT...TGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | CTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACATCTCTCGCTAGGCTCTTGCAGTaGTGGCTTACCCAGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLETGILTLTKILYRTSLARLLQ*WLTQER Trigger: GCGCTCCTGGGTAAGCCAGCACTGCAAGAGCCTAGC...GAGAGATGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | CCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACAACAGTGGTCTCGCCATaGCGGCTGTTGGTGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: PCLLETGILTLTKILYRTTVVSP*RLLVRR Trigger: TCGTCTCACCAACAGCCGGCATGGCGAGACCACTGT...TGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR GCA 90 bp | CTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACATCTCTCCTGAGAAGCGCTCATTaGATACCACGCGCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLETGILTLTKILYRTSLLRSAH*IPRAPG Trigger: TCCAGGAGCGCGTGGTATGCAATGAGCGCTTCTCAG...GAGAGATGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| 3UTR CAA 72 bp | TTTGCACTATTTATTATCAAGAAACAGGAGAGACGGTaGAGAGCGGAGCTCTGGCACACTGGTCTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: FALFIIKKQERR*RAELWHTGLQI Trigger: GATCTGAAGACCAGTGTGCCAGAGCTCCGCTCTCAACCGTCTCTCCTGTTTCTTGATAATAAATAGTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS TCA 90 bp | GGGTGCCACCCGCGCCGGGCTGCAGCCCAGAAGGTGGCGCGGTGGTaGGTAGCGCAGGAGCTCCGTCCTCCGAGTGGTTCTGGCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: GCHPRRAAAQKVARW*VAQELRPPSGSGPR Trigger: GCGTGGGCCAGAACCACTCGGAGGACGGAGCTCCTGCGCTACTCACCACCGCGCCACCTTCTGGGCTGCAGCCCGGCGCGGGTGGCACCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS GCA 90 bp | ACCGACCATGTGAGGATCCAGAGACGGGCAAAACGAGTCTCCTCTTaGGAGAAGAACATAGAGCCGTCGGGCCGTGCGGGCTCGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: TDHVRIQRRAKRVSS*EKNIEPSGRAGSQG Trigger: GCCCTGCGAGCCCGCACGGCCCGACGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTTGCCCGTCTCTGGATCCTCACATGGTCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CAA 90 bp | GTGAAGGAGGGCACGGTGCAGTCCGGACCTGGGAGAGGGGAAAGCCCGGCAGGCAAAACGAGTCTCCTCTaGCGAGAAGAACATAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VKEGTVQSGPGRGESPAGKTSLL*REEHRA Trigger: GGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTT...GCCTGCCGGGCTTTCCCCTCTCCCAGGTCCGGACTGCACCGTGCCCTCCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS TCA 90 bp | GCCTTCTTTCTTAGTGCCCTGCACCACCGTGCGATAACCGTCCTCTaGGAAGCGCTCATTGCATACCACGCGCTCCTGGAGAACGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: AFFLSALHHRAITVL*EALIAYHALLENEA Trigger: GGCTTCGTTCTCCAGGAGCGCGTGGTATGCAATGAGCGCTTCTCAGAGGACGGTTATCGCACGGTGGTGCAGGGCACTAAGAAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CAA 90 bp | AACCCACACATAACACACAACCCAATCCTACAAACAGCTAACCTGGATCCCACCGGGATGGCTAGGCTCTaGCAGTGCTGGCTTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: NPHITHNPILQTANLDPTGMARL*QCWLTQ Trigger: CTGGGTAAGCCAGCACTGCAAGAGCCTAGCCATCCC...GGTGGGATCCAGGTTAGCTGTTTGTAGGATTGGGTTGTGTGTTATGTGTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CAA 90 bp | CTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACATCTCTCAGCGGGTCCAGGCTATaGAGGCCCACGAAGCACACG | + |
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Preference number: 5 (lower is better) Translates to: LLETGILTLTKILYRTSLSGSRL*RPTKHT Trigger: CGTGTGCTTCGTGGGCCTCAATAGCCTGGACCCGCT...GAGAGATGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS-3UTR CAA 90 bp | CCATGCCTGCTGGAAACTGGGATTCTCACACTAACAAAGATACTTTATAGAACATCTGAGAAGCGCTCATaGCATACCACGCGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PCLLETGILTLTKILYRTSEKRS*HTTRSW Trigger: CCAGGAGCGCGTGGTATGCAATGAGCGCTTCTCAGA...TGTTCTATAAAGTATCTTTGTTAGTGTGAGAATCCCAGTTTCCAGCAGGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS CCA 72 bp | GAACTGGGCCGGTCCGGCGGCCGGCAGCAGCAGCAGTaGCAGCAGCAGGCGGGGCAGGGCGCTGCGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ELGRSGGRQQQQ*QQQAGQGAAGQ Trigger: CTGCCCCGCAGCGCCCTGCCCCGCCTGCTGCTGCCACTGCTGCTGCTGCCGGCCGCCGGACCGGCCCAGTTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS GCA 72 bp | GCGTGTAGTGGGCCGGGCAGGGGATGGCTAGGCTCTTaGAGTGCTGGCTTACCCAGGAGCGCTCCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ACSGPGRGWLGS*SAGLPRSAPSA Trigger: AGCACTGGGAGCGCTCCTGGGTAAGCCAGCACTGCAAGAGCCTAGCCATCCCCTGCCCGGCCCACTACACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS CAA 90 bp | CACCGACCATGTGAGGATCCAGAGACGGGCAAAACGAGTCTCCTCTaGCGAGAAGAACATAGAGCCGTCGGGCCGTGCGGGCTCGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HRPCEDPETGKTSLL*REEHRAVGPCGLAG Trigger: CCCTGCGAGCCCGCACGGCCCGACGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTTGCCCGTCTCTGGATCCTCACATGGTCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS GCA 72 bp | GTGAGGATCCAGAGACGGGCAAAACGAGTCTCCTCTTaGGAGAAGAACATAGAGCCGTCGGGCCGTGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: VRIQRRAKRVSS*EKNIEPSGRAG Trigger: GCCCGCACGGCCCGACGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTTGCCCGTCTCTGGATCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS TCA 72 bp | CTTAGTGCCCTGCACCACCGTGCGATAACCGTCCTCTaGGAAGCGCTCATTGCATACCACGCGCTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSALHHRAITVL*EALIAYHALLE Trigger: CTCCAGGAGCGCGTGGTATGCAATGAGCGCTTCTCAGAGGACGGTTATCGCACGGTGGTGCAGGGCACTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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| CDS CAA 72 bp | TGTGAGGATCCAGAGACGGGCAAAACGAGTCTCCTCTaGCGAGAAGAACATAGAGCCGTCGGGCCGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CEDPETGKTSLL*REEHRAVGPCG Trigger: CCCGCACGGCCCGACGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTTGCCCGTCTCTGGATCCTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057893.7 |
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