Pregenerated sensors for FZD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044674Ensembl transcript IDs: ENSMUST00000054294.7
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCTGTGCTGTTTGTTGGGAAAGGGGCCTGCAAAAGTCAGTGGCTaGCGAGGAAGCCTGGAGTGGCCAGGCTTGGCAGGAATTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: NLCCLLGKGPAKVSG*RGSLEWPGLAGIPW Trigger: CCAAGGAATTCCTGCCAAGCCTGGCCACTCCAGGCTTCCTCGCCAGCCACTGACTTTTGCAGGCCCCTTTCCCAACAAACAGCACAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 90 bp | GACACCGGGGTACAGGGAGGCTGGGTCAACTGGCAGAGCCCATACTaGGGTCCTCTAATAAAGCTGGAAGGTGGATCTCAAATAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: DTGVQGGWVNWQSPY*GPLIKLEGGSQISS Trigger: GCTGCTTATTTGAGATCCACCTTCCAGCTTTATTAGAGGACCCCAGTATGGGCTCTGCCAGTTGACCCAGCCTCCCTGTACCCCGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR TCA 90 bp | ACCGCCTCTGTCTTCGGAAGTCCAACCAGGCTTTCTGCGGGGGTGTaGCTGTTTCTCCCTCAGAATGTGCTGCTGAGGAGTAAGCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: TASVFGSPTRLSAGV*LFLPQNVLLRSKQS Trigger: ACTTTGCTTACTCCTCAGCAGCACATTCTGAGGGAGAAACAGTCACACCCCCGCAGAAAGCCTGGTTGGACTTCCGAAGACAGAGGCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 90 bp | AGATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATaGCTAGGTCGTGTTTGTCTCTCTCACCCATCCGTCAGTCCACCG | + |
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Preference number: 1 (lower is better) Translates to: RWDAVGMDTLPLQHA*LGRVCLSHPSVSPP Trigger: CGGTGGACTGACGGATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 90 bp | TTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATaGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGC | + |
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Preference number: 1 (lower is better) Translates to: LHLTHCRKSRQEHTR*DAVGMDTLPLQHAC Trigger: GCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 90 bp | AAAAATCTTACACAGGCTATTTACAATCATAAAAGCGTACAATCCTaGTATCAGAGAGGGCTAGAGAGATCGGTCCACACGCACATACAC | + |
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Preference number: 1 (lower is better) Translates to: KNLTQAIYNHKSVQS*YQRGLERSVHTHIH Trigger: GTGTATGTGCGTGTGGACCGATCTCTCTAGCCCTCTCTGATACCAGGATTGTACGCTTTTATGATTGTAAATAGCCTGTGTAAGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CAA 90 bp | AGGAATGGACACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTaGTCTCTCTCACCCATCCGTCAGTCCACCGCCTCTGTCTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: RNGHTSPSACMPRSC*SLSPIRQSTASVFG Trigger: TCCGAAGACAGAGGCGGTGGACTGACGGATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CAA 90 bp | CTAGAGAGATCGGTCCACACGCACATACACATACACCTCGATCAGTaGGGCCCTCTCGTTCCTTTACCCCAGGGACGGAAGCTTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LERSVHTHIHIHLDQ*GPLVPLPQGRKLLQ Trigger: CTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAACGAGAGGGCCCAACTGATCGAGGTGTATGTGTATGTGCGTGTGGACCGATCTCTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGAGGGACGGAAGCTTTTaGAGAACCTGTGCTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: EMTLERQAHAPLTKMRAQRDGSF*RTCAVC Trigger: ACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCT...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR TCA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGGCAGAAAAGGGCAAGTaGGAAAAGCTCCAAATACGT | + |
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Preference number: 2 (lower is better) Translates to: EMTLERQAHAPLTKMRAQAEKGK*EKLQIR Trigger: ACGTATTTGGAGCTTTTCTCACTTGCCCTTTTCTGC...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTTTGGCAGGAATTCCTTaGGGCCAGCTTCCAGGCGAT | + |
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Preference number: 2 (lower is better) Translates to: HQASQATSRSAFHRRVKSLAGIP*GQLPGD Trigger: ATCGCCTGGAAGCTGGCCCCAAGGAATTCCTGCCAA...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | CACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTTGTCTCTCTCACCCATCGCACTTAGTCAAGTGTaGTCTGTTTTACCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HTSPSACMPRSCLSLSPIALSQV*SVLPPL Trigger: CAGAGGAGGTAAAACAGAGCACACTTGACTAAGTGC...GATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | CACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTTGTCTCTCTCACCCATCACCCACAAAGCTTGCTaGTCTTTCCATGATGATGAC | + |
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Preference number: 2 (lower is better) Translates to: HTSPSACMPRSCLSLSPITHKAC*SFHDDD Trigger: GTCATCATCATGGAAAGAGCAGCAAGCTTTGTGGGT...GATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTACCTGTGCTGTTTGTTaGGAAAGGGGCCTGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: HQASQATSRSAFHRRVKSTCAVC*ERGLQK Trigger: CTTTTGCAGGCCCCTTTCCCAACAAACAGCACAGGT...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTCTTTTGCAGAACCTGTaGTGTTTGTTGGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HQASQATSRSAFHRRVKSLLQNL*CLLGKG Trigger: CCCCTTTCCCAACAAACAGCACAGGTTCTGCAAAAG...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGGTTGGGAAAGGGGCCTaGAAAAGTCAGTGGCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWVGKGA*KSQWLA Trigger: CGCCAGCCACTGACTTTTGCAGGCCCCTTTCCCAAC...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGCGAGGAAGCCTGGAGTaGCCAGGCTTGGCAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWRGSLE*PGLAGI Trigger: AATTCCTGCCAAGCCTGGCCACTCCAGGCTTCCTCG...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGGCCTGCAAAAGTCAGTaGCTGGCGAGGAAGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWACKSQ*LARKPG Trigger: TCCAGGCTTCCTCGCCAGCCACTGACTTTTGCAGGC...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATCTGTTTTACCTCCTCTaGAATCTGCAGAAAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDLFYLL*NLQKRA Trigger: TGCCCTTTTCTGCAGATTGCAGAGGAGGTAAAACAG...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR TCA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATGTAACTCCACTTCACTaGAATCTCCTTAGGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDVTPLH*NLLRFP Trigger: TGGAAACCTAAGGAGATTTCAGTGAAGTGGAGTTAC...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTAGCTTTACAGAGTTCTaGACCTTAAAATTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: HQASQATSRSAFHRRVKSSFTEF*TLKFPT Trigger: AGTGGGAAATTTTAAGGTGCAGAACTCTGTAAAGCT...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CCA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATAAACAGCGTTTCACTTaGAGTAACTCCACTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDKQRFT*SNSTSL Trigger: CAGTGAAGTGGAGTTACTCCAAGTGAAACGCTGTTT...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 72 bp | TGTTTGTTGGGAAAGGGGCCTGCAAAAGTCAGTGGCTaGCGAGGAAGCCTGGAGTGGCCAGGCTTGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: CLLGKGPAKVSG*RGSLEWPGLAG Trigger: TCCTGCCAAGCCTGGCCACTCCAGGCTTCCTCGCCAGCCACTGACTTTTGCAGGCCCCTTTCCCAACAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 72 bp | CGGTCCACACGCACATACACATACACCTCGATCAGTTaGGCCCTCTCGTTCCTTTACCCCAGGGACGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: RSTRTYTYTSIS*ALSFLYPRDGS Trigger: GCTTCCGTCCCTGGGGTAAAGGAACGAGAGGGCCCAACTGATCGAGGTGTATGTGTATGTGCGTGTGGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | GATGCTGAAGGAAATGACCCTGGAGAGGCAGGCCCATaGTCCCTTGACAAAGATGAGGGCACAGGGCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: DAEGNDPGEAGP*SLDKDEGTGQS Trigger: GCTTTGCCCTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTCCTTCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | TCGGTCGGTTACTGCACTCCCTCTGAACAACTTAGGTaGAAGGAGAAAGACACTGGGCAAGGGACACCGGGG | + |
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Preference number: 3 (lower is better) Translates to: SVGYCTPSEQLR*KEKDTGQGTPG Trigger: CCCCGGTGTCCCTTGCCCAGTGTCTTTCTCCTTGCACCTAAGTTGTTCAGAGGGAGTGCAGTAACCGACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR TCA 72 bp | GTCTTCGGAAGTCCAACCAGGCTTTCTGCGGGGGTGTaGCTGTTTCTCCCTCAGAATGTGCTGCTGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: VFGSPTRLSAGV*LFLPQNVLLRS Trigger: ACTCCTCAGCAGCACATTCTGAGGGAGAAACAGTCACACCCCCGCAGAAAGCCTGGTTGGACTTCCGAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | TTTGCAGAACCTGTGCTGTTTGTTGGGAAAGGGGCCTaGAAAAGTCAGTGGCTGGCGAGGAAGCCTGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: FAEPVLFVGKGA*KSQWLARKPGV Trigger: CACTCCAGGCTTCCTCGCCAGCCACTGACTTTTGCAGGCCCCTTTCCCAACAAACAGCACAGGTTCTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CAA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTCTGGAGTGGCCAGGCTaGGCAGGAATTCCTTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: HQASQATSRSAFHRRVKSLEWPG*AGIPWG Trigger: GCCCCAAGGAATTCCTGCCAAGCCTGGCCACTCCAG...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | GCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATaGCTAGGTCGTGTTTGTCTCTCTCACCCATCCGTC | + |
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Preference number: 3 (lower is better) Translates to: AVGMDTLPLQHA*LGRVCLSHPSV Trigger: GACGGATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 72 bp | GTACAGGGAGGCTGGGTCAACTGGCAGAGCCCATACTaGGGTCCTCTAATAAAGCTGGAAGGTGGATCTCAA | + |
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Preference number: 3 (lower is better) Translates to: VQGGWVNWQSPY*GPLIKLEGGSQ Trigger: TTGAGATCCACCTTCCAGCTTTATTAGAGGACCCCAGTATGGGCTCTGCCAGTTGACCCAGCCTCCCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | GGGCCCACCTCGGGATCTGGAAGCTTTACAGAGTTCTaGACCTTAAAATTTCCCACTGCAAGCAAGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: GPTSGSGSFTEF*TLKFPTASKEG Trigger: CCCTTCCTTGCTTGCAGTGGGAAATTTTAAGGTGCAGAACTCTGTAAAGCTTCCAGATCCCGAGGTGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CAA 90 bp | TCCCAACCCACAAAGCTTGCTGCTCTTTCCATGATGATGACCAGACCCAGAGCAAACCTGTGCTGTTTGTaGGGAAAGGGGCCTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SQPTKLAALSMMMTRPRANLCCL*GKGPAK Trigger: TTTTGCAGGCCCCTTTCCCAACAAACAGCACAGGTT...TGCTCTGGGTCTGGTCATCATCATGGAAAGAGCAGCAAGCTTTGTGGGTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CAA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATCAGAACCTGTGCTGTTaGTTGGGAAAGGGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDQNLCC*LGKGPA Trigger: TGCAGGCCCCTTTCCCAACAAACAGCACAGGTTCTG...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CAA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATCAGGGACGGAAGCTTTaGCAGAACCTGTGCTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDQGRKL*QNLCCL Trigger: CAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTG...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | AAGATGAGGGCACAGGGCAAAGCACTTAGTCAAGTGTaGTCTGTTTTACCTCCTCTGCAATCTGCAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: KMRAQGKALSQV*SVLPPLQSAEK Trigger: CTTTTCTGCAGATTGCAGAGGAGGTAAAACAGAGCACACTTGACTAAGTGCTTTGCCCTGTGCCCTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR-3UTR CAA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATGGGGAAGAAAGTAGGTaGCCAGACATCAGAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDGEESR*PDIRMQ Trigger: TTGCATTCTGATGTCTGGCAACCTACTTTCTTCCCC...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CCA 72 bp | ACACAGGCTATTTACAATCATAAAAGCGTACAATCCTaGTATCAGAGAGGGCTAGAGAGATCGGTCCACACG | + |
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Preference number: 3 (lower is better) Translates to: TQAIYNHKSVQS*YQRGLERSVHT Trigger: CGTGTGGACCGATCTCTCTAGCCCTCTCTGATACCAGGATTGTACGCTTTTATGATTGTAAATAGCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR TCA 72 bp | GAAAACAGCGTTTCACTTGGAGTAACTCCACTTCACTaGAATCTCCTTAGGTTTCCATACTCTGTGTATGTT | + |
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Preference number: 3 (lower is better) Translates to: ENSVSLGVTPLH*NLLRFPYSVYV Trigger: AACATACACAGAGTATGGAAACCTAAGGAGATTTCAGTGAAGTGGAGTTACTCCAAGTGAAACGCTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR GCA 72 bp | GCAAAGTGTATTGTTGATTGTGTACAACTTTTAGATTaGAAAGACACATCTAATTGCAGTTTGGCTAAAACC | + |
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Preference number: 3 (lower is better) Translates to: AKCIVDCVQLLD*KDTSNCSLAKT Trigger: GGTTTTAGCCAAACTGCAATTAGATGTGTCTTTGCAATCTAAAAGTTGTACACAATCAACAATACACTTTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CAA 72 bp | AGGAAGCCTGGAGTGGCCAGGCTTGGCAGGAATTCCTaGGGGCCAGCTTCCAGGCGATGGCTAGGATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKPGVARLGRNS*GPASRRWLGSG Trigger: GCCTGATCCTAGCCATCGCCTGGAAGCTGGCCCCAAGGAATTCCTGCCAAGCCTGGCCACTCCAGGCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | ATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGCCCTGCGCCACCGTaGGCGCCCCGTCCTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: MGCSRNGHTSPSACMPRSCPAPP*APRPLQ Trigger: TTGCAGAGGACGGGGCGCGCACGGTGGCGCAGGGCA...CGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGCCTGCTCCAGTACGGTaGACACAGGCGCGTACATGG | + |
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Preference number: 4 (lower is better) Translates to: EMTLERQAHAPLTKMRAQPAPVR*TQARTW Trigger: CCATGTACGCGCCTGTGTGCACCGTACTGGAGCAGG...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | CACAAGATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTGGTGGGTTCGCAGGGTaGGCCGCAGTCCTTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HKMGCSRNGHTSPSACMPGGFAG*AAVLLP Trigger: GGGGAGAAGGACTGCGGCGCACCCTGCGAACCCACC...AGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCATCTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR CCA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGGAAGCGCAGCTCCTCTaGCCCGAAGTACATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EMTLERQAHAPLTKMRAQEAQLL*PEVHEP Trigger: GGGCTCATGTACTTCGGGCCAGAGGAGCTGCGCTTC...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | ATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTAGGTCGCACGCACAGCTCTCCTaGGCCGTGCACCGGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: MGCSRNGHTSPSACMPRSHAQLS*AVHREL Trigger: AAGTTCCCGGTGCACGGCGCAGGAGAGCTGTGCGTG...CGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | GTTCCTTTACCCCAGGGACGGAAGCTTTTGCAGAACCTGTGCTGTTTGTTGGGAAGCTCTCCTGCGCCGTaGACCGGGAACTTCTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: VPLPQGRKLLQNLCCLLGSSPAP*TGNFSH Trigger: GTGCGAGAAGTTCCCGGTGCACGGCGCAGGAGAGCT...TCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| 3UTR CAA 72 bp | GGCCCTCTCGTTCCTTTACCCCAGGGACGGAAGCTTTaGCAGAACCTGTGCTGTTTGTTGGGAAAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLVPLPQGRKL*QNLCCLLGKGP Trigger: AGGCCCCTTTCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAACGAGAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| 3UTR CAA 72 bp | TCGGTCCACACGCACATACACATACACCTCGATCAGTaGGGCCCTCTCGTTCCTTTACCCCAGGGACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVHTHIHIHLDQ*GPLVPLPQGRK Trigger: CTTCCGTCCCTGGGGTAAAGGAACGAGAGGGCCCAACTGATCGAGGTGTATGTGTATGTGCGTGTGGACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| 3UTR CAA 72 bp | CACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTaGTCTCTCTCACCCATCCGTCAGTCCACCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSPSACMPRSC*SLSPIRQSTAS Trigger: AGAGGCGGTGGACTGACGGATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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| CDS-3UTR GCA 90 bp | GTTCCTTTACCCCAGGGACGGAAGCTTTTGCAGAACCTGTGCTGTTTGTTGGGAGGTCCGGGATGGAGATaGCCCGTTCGCCGTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VPLPQGRKLLQNLCCLLGGPGWR*PVRRCT Trigger: AGTACAACGGCGAACGGGGCATCTCCATCCCGGACC...TCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTTACCCCAGGGACGGAAGCTTTTGCAGAACCTGTGCTGTTTGTTGGGAGCGCGCCCCGTCCTCTaGAAACTTGTCGTTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLPQGRKLLQNLCCLLGARPVL*KLVVAH Trigger: GTGTGCAACGACAAGTTTGCAGAGGACGGGGCGCGC...TCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTTCTGGGCCACCCAGCTaGGCTCCCACTGGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HQASQATSRSAFHRRVKSSGPPS*APTGPE Trigger: TTCGGGACCAGTGGGAGCGCAGCTGGGTGGCCCAGA...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR TCA 90 bp | CACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTTGTCTCTCTCACCCATCCAGTGTAGAGGACACTaGAGACTCCGATGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HTSPSACMPRSCLSLSPIQCRGH*RLRCAP Trigger: TGGTGCGCATCGGAGTCTTCAGTGTCCTCTACACTG...GATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | CACCAAGCTTCCCAGGCAACCTCGAGGTCTGCATTTCATAGAAGGGTAAAATCTCAGGGCGGTAGCGCCTaGTCCAGTACGGTGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: HQASQATSRSAFHRRVKSQGGSA*SSTVHT Trigger: TGTGTGCACCGTACTGGAGCAGGCGCTACCGCCCTG...AGATTTTACCCTTCTATGAAATGCAGACCTCGAGGTTGCCTGGGAAGCTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | TCCCAACCCACAAAGCTTGCTGCTCTTTCCATGATGATGACCAGACCCAGAGCAAGATGCCTATCCAGGTaGGCGAGAAGCGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPTKLAALSMMMTRPRARCLSR*ARSAAP Trigger: AGGAGCTGCGCTTCTCGCGCACCTGGATAGGCATCT...TGCTCTGGGTCTGGTCATCATCATGGAAAGAGCAGCAAGCTTTGTGGGTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | CACAAGATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTCACAAAGCCACGCAGTaGGTCCACGTTGTTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKMGCSRNGHTSPSACMPHKATQ*VHVVEP Trigger: GGGCTCAACAACGTGGACGCACTGCGTGGCTTTGTG...AGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCATCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| 3UTR CAA 72 bp | AAGGAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTaGACAAAGATGAGGGCACAGGGCAAAGCACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEMTLERQAHAP*TKMRAQGKALS Trigger: ACTAAGTGCTTTGCCCTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR TCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGGGTAGGAGGGCACCCTaGGGGCGCGCGGGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWGRRAP*GRAGRR Trigger: TCTCCTGCCCGCGCGCCCTCAGGGTGCCCTCCTACC...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATTCGCCGTTGTACTGCTaGCCGCTCTGCTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDSPLYC*PLCWGW Trigger: CCAGCCCCAGCAGAGCGGGCAGCAGTACAACGGCGA...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CCA 90 bp | ATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTAGGTCGCGTGCTGCGGATTACTaGTCCAGAACTCTGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGCSRNGHTSPSACMPRSRAADY*SRTLVA Trigger: TGCTACCAGAGTTCTGGACCAGTAATCCGCAGCACG...CGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTTACCCCAGGGACGGAAGCTTTTGCAGAACCTGTGCTGTTTGTTGGGAGAAGACTGTAAAGTCTaGGCTCATGGGCGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLPQGRKLLQNLCCLLGEDCKV*AHGRVW Trigger: CCACACCCGCCCATGAGCCCAGACTTTACAGTCTTC...TCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CCA 90 bp | TCCCAACCCACAAAGCTTGCTGCTCTTTCCATGATGATGACCAGACCCAGAGCAGCACTTGAGTGTGTCTaGCCACTGGAAGCCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SQPTKLAALSMMMTRPRAALECV*PLEAEL Trigger: AAGTTCGGCTTCCAGTGGCCAGACACACTCAAGTGC...TGCTCTGGGTCTGGTCATCATCATGGAAAGAGCAGCAAGCTTTGTGGGTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | CTTACACAGGCTATTTACAATCATAAAAGCGTACAATCCTGGTATCAGAGAGGGCCACCGCCGCCGTGCTaGGGATTACTGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTQAIYNHKSVQSWYQRGPPPPC*GLLVQN Trigger: GTTCTGGACCAGTAATCCGCAGCACGGCGGCGGTGG...CCCTCTCTGATACCAGGATTGTACGCTTTTATGATTGTAAATAGCCTGTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR TCA 90 bp | GATTTACATTTGACACACTGCCGTAAATCCAGACAGGAGCACACAAGATGGGATGGAACTTCTCGCACTTaGGTGTGTCTGGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTHCRKSRQEHTRWDGTSRT*VCLATG Trigger: TCCAGTGGCCAGACACACTCAAGTGCGAGAAGTTCC...ATCCCATCTTGTGTGCTCCTGTCTGGATTTACGGCAGTGTGTCAAATGTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | GGTATGACAGACATAGATAAATTTAGGTCCTATGTATGTATCGGCATTTGTGATTCTTTCTTAGTGCCCTaGGCCACCGTGCGCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GMTDIDKFRSYVCIGICDSFLVP*ATVRAP Trigger: CGGGGCGCGCACGGTGGCGCAGGGCACTAAGAAAGA...ATCACAAATGCCGATACATACATAGGACCTAAATTTATCTATGTCTGTCATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR TCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGCTGGCCCGAAGTACATaGGCCCGTAAACCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWLARST*ARKPWW Trigger: CCACCAAGGTTTACGGGCTCATGTACTTCGGGCCAG...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | CTTACACAGGCTATTTACAATCATAAAAGCGTACAATCCTGGTATCAGAGAGGGAGGAGGGAGTTGGGGTaGCTTTGTCGGACGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTQAIYNHKSVQSWYQRGRRELG*LCRTCS Trigger: AGAACACGTCCGACAAAGGCACCCCAACTCCCTCCT...CCCTCTCTGATACCAGGATTGTACGCTTTTATGATTGTAAATAGCCTGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGACAGCACGGACCAGATaGCTATCCAGGTGCGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWTARTR*LSRCAR Trigger: TCTCGCGCACCTGGATAGGCATCTGGTCCGTGCTGT...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGTTGTCGGACGTGTTCTaGCCCACGCACAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWLSDVF*PTHSSP Trigger: AGGAGAGCTGTGCGTGGGCCAGAACACGTCCGACAA...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR GCA 90 bp | GGTATGACAGACATAGATAAATTTAGGTCCTATGTATGTATCGGCATTTGTGATGGATGGCATAACTCTTaGAGCTCTGGGCCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTDIDKFRSYVCIGICDGWHNS*SSGPPS Trigger: GCTGGGTGGCCCAGAGCTGCAAGAGTTATGCCATCC...ATCACAAATGCCGATACATACATAGGACCTAAATTTATCTATGTCTGTCATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CCA 90 bp | AAAGACACATCTAATTGCAGTTTGGCTAAAACCAGAAAACAGCGTTTCACTTGGGGTGAGGGCAAGGGATaGCATAACTCTTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDTSNCSLAKTRKQRFTWGEGKG*HNSCSS Trigger: AGAGCTGCAAGAGTTATGCCATCCCTTGCCCTCACC...CCAAGTGAAACGCTGTTTTCTGGTTTTAGCCAAACTGCAATTAGATGTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 90 bp | GCTGGCCGTGTCCTCGTGCCCCACCTCCTCCCGCCGGCCCGGGAGTaGTTCGGCACAAAGTTCCAAGCTCAGCCGGCCGGCGGCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGRVLVPHLLPPARE*FGTKFQAQPAGGPG Trigger: TCCCGGGCCGCCGGCCGGCTGAGCTTGGAACTTTGTGCCGAAGCACTCCCGGGCCGGCGGGAGGAGGTGGGGCACGAGGACACGGCCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 90 bp | CTCCTCCACCTCCCTGGAGGTGAGGGCAAGGGATGGCATAACTCTTaGAGCTCTGGGCCACCCAGCTGCGCTCCCACTGGTCCCGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHLPGGEGKGWHNS*SSGPPSCAPTGPER Trigger: CCTTTCGGGACCAGTGGGAGCGCAGCTGGGTGGCCCAGAGCTGCAAGAGTTATGCCATCCCTTGCCCTCACCTCCAGGGAGGTGGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CCA 90 bp | CCGGGTAGCCGCCGCGGTAACCACCGCCGCCGTGCTGCGGATTACTaGTCCAGAACTCTGGTAGCAAGGAGGGAGTTGGGGTGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRRGNHRRRAADY*SRTLVARRELGCLC Trigger: ACAAAGGCACCCCAACTCCCTCCTTGCTACCAGAGTTCTGGACCAGTAATCCGCAGCACGGCGGCGGTGGTTACCGCGGCGGCTACCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS TCA 90 bp | CTATCCAGGTGCGCGAGAAGCGCAGCTCCTCTGGCCCGAAGTACATaGGCCCGTAAACCTTGGTGGGTTCGCAGGGTGCGCCGCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRCARSAAPLARST*ARKPWWVRRVRRSP Trigger: AGGACTGCGGCGCACCCTGCGAACCCACCAAGGTTTACGGGCTCATGTACTTCGGGCCAGAGGAGCTGCGCTTCTCGCGCACCTGGATAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CCA 90 bp | CACGGACCAGATGCCTATCCAGGTGCGCGAGAAGCGCAGCTCCTCTaGCCCGAAGTACATGAGCCCGTAAACCTTGGTGGGTTCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGPDAYPGAREAQLL*PEVHEPVNLGGFAG Trigger: CCCTGCGAACCCACCAAGGTTTACGGGCTCATGTACTTCGGGCCAGAGGAGCTGCGCTTCTCGCGCACCTGGATAGGCATCTGGTCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 90 bp | TGGCCCGAAGTACATGAGCCCGTAAACCTTGGTGGGTTCGCAGGGTaGGCCGCAGTCCTTCTCCCCCAGAAAGTGGTAGTTGAGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPEVHEPVNLGGFAG*AAVLLPQKVVVEVG Trigger: TCCTACCTCAACTACCACTTTCTGGGGGAGAAGGACTGCGGCGCACCCTGCGAACCCACCAAGGTTTACGGGCTCATGTACTTCGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTATCAGAGAGGGCTAGAGAGATCGGTCCACACGCACATACACATACACGGAGTTGGGGTGCCTTaGTCGGACGTGTTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWYQRGLERSVHTHIHIHGVGVP*SDVFWP Trigger: GGGCCAGAACACGTCCGACAAAGGCACCCCAACTCC...GTGTATGTGTATGTGCGTGTGGACCGATCTCTCTAGCCCTCTCTGATACCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGGTAGTCTCCCCCTGTTaGCTGTTGGTAAGCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EMTLERQAHAPLTKMRAQVVSPC*LLVSLV Trigger: CACGAGGCTTACCAACAGCAAACAGGGGGAGACTAC...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | ATGGGATGCAGTAGGAATGGACACACTTCCCCTTCAGCATGCATGCCTAGGTCGGGGAACTTCTCGCACTaGAGTGTGTCTGGCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGCSRNGHTSPSACMPRSGNFSH*SVSGHW Trigger: CCAGTGGCCAGACACACTCAAGTGCGAGAAGTTCCC...CGACCTAGGCATGCATGCTGAAGGGGAAGTGTGTCCATTCCTACTGCATCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTTACCCCAGGGACGGAAGCTTTTGCAGAACCTGTGCTGTTTGTTGGGATCTGCAAACTTGTCGTaGCACACCACCCGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPLPQGRKLLQNLCCLLGSANLS*HTTRSS Trigger: GGAGGACCGGGTGGTGTGCAACGACAAGTTTGCAGA...TCCCAACAAACAGCACAGGTTCTGCAAAAGCTTCCGTCCCTGGGGTAAAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | GAAATGACCCTGGAGAGGCAGGCCCATGCTCCCTTGACAAAGATGAGGGCACAGAAGATGGTTATAGTTTaGATGGCTGGCACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EMTLERQAHAPLTKMRAQKMVIV*MAGTAQ Trigger: CTGGGCTGTGCCAGCCATCAAAACTATAACCATCTT...CTGTGCCCTCATCTTTGTCAAGGGAGCATGGGCCTGCCTCTCCAGGGTCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS-3UTR CAA 90 bp | CACACTTCCCCTTCAGCATGCATGCCTAGGTCGTGTTTGTCTCTCTCACCCATCAGTGCGTCCACGTTGTaGAGCCCCACAAAACACACT | + |
|
Preference number: 5 (lower is better) Translates to: HTSPSACMPRSCLSLSPISASTL*SPTKHT Trigger: AGTGTGTTTTGTGGGGCTCAACAACGTGGACGCACT...GATGGGTGAGAGAGACAAACACGACCTAGGCATGCATGCTGAAGGGGAAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 72 bp | GCTTGCTGGCCCGGCCCGGATACCTGGCCCGCCGCCTaGGCTCGGACCCCCAAAAGCAGAGGAGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACWPGPDTWPAA*ARTPKSRGASS Trigger: GCTGGAGGCTCCTCTGCTTTTGGGGGTCCGAGCGCAGGCGGCGGGCCAGGTATCCGGGCCGGGCCAGCAAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 72 bp | GTCCTCGTGCCCCACCTCCTCCCGCCGGCCCGGGAGTaGTTCGGCACAAAGTTCCAAGCTCAGCCGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLVPHLLPPARE*FGTKFQAQPAG Trigger: GCCGGCCGGCTGAGCTTGGAACTTTGTGCCGAAGCACTCCCGGGCCGGCGGGAGGAGGTGGGGCACGAGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CAA 72 bp | GCCACCGTGCGCGCCCCGTCCTCTGCAAACTTGTCGTaGCACACCACCCGGTCCTCCAACAGAAAGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ATVRAPSSANLS*HTTRSSNRKPA Trigger: CGCTGGCTTTCTGTTGGAGGACCGGGTGGTGTGCAACGACAAGTTTGCAGAGGACGGGGCGCGCACGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS TCA 72 bp | TGCGCGAGAAGCGCAGCTCCTCTGGCCCGAAGTACATaGGCCCGTAAACCTTGGTGGGTTCGCAGGGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: CARSAAPLARST*ARKPWWVRRVR Trigger: GCGCACCCTGCGAACCCACCAAGGTTTACGGGCTCATGTACTTCGGGCCAGAGGAGCTGCGCTTCTCGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 72 bp | CCACCGTGCGCGCCCCGTCCTCTGCAAACTTGTCGTTaGACACCACCCGGTCCTCCAACAGAAAGCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PPCAPRPLQTCR*TPPGPPTESQR Trigger: TCGCTGGCTTTCTGTTGGAGGACCGGGTGGTGTGCAACGACAAGTTTGCAGAGGACGGGGCGCGCACGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CCA 72 bp | GAAGACTGTAAAGTCTGGGCTCATGGGCGGGTGTGGTaGGACTCCTCCACCTCCCTGGAGGTGAGGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDCKVWAHGRVW*DSSTSLEVRAR Trigger: CCTTGCCCTCACCTCCAGGGAGGTGGAGGAGTCCCACCACACCCGCCCATGAGCCCAGACTTTACAGTCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CCA 72 bp | GATGCCTATCCAGGTGCGCGAGAAGCGCAGCTCCTCTaGCCCGAAGTACATGAGCCCGTAAACCTTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DAYPGAREAQLL*PEVHEPVNLGG Trigger: CCCACCAAGGTTTACGGGCTCATGTACTTCGGGCCAGAGGAGCTGCGCTTCTCGCGCACCTGGATAGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS GCA 72 bp | GTACATGAGCCCGTAAACCTTGGTGGGTTCGCAGGGTaGGCCGCAGTCCTTCTCCCCCAGAAAGTGGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VHEPVNLGGFAG*AAVLLPQKVVV Trigger: AACTACCACTTTCTGGGGGAGAAGGACTGCGGCGCACCCTGCGAACCCACCAAGGTTTACGGGCTCATGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
||
| CDS CCA 72 bp | ACAAAACACACTCCGCTCAGTACGTCGCCATCCACCTaGCCCAACGCCAAGATGGTTATAGTTTTGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TKHTPLSTSPST*PNAKMVIVLMA Trigger: AGCCATCAAAACTATAACCATCTTGGCGTTGGGCCAGGTGGATGGCGACGTACTGAGCGGAGTGTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054294.7 |
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