Pregenerated sensors for FYTTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022800Ensembl transcript IDs: ENSMUST00000023489.11, ENSMUST00000120345.2, ENSMUST00000171325.9, ENSMUST00000232272.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTaGACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: NLSVGQCLSCLLHLY*TQTIRFHTRRLLQG Trigger: TCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR TCA 90 bp | ATTCGCCTTGGTGGCCTCATGTTGGAACCTCAGGTCACCCATGCATaGAATGGTCAAAAGTCAGAGGAACACCAAGAGTGGAGATTTAGC | + |
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Preference number: 1 (lower is better) Translates to: IRLGGLMLEPQVTHA*NGQKSEEHQEWRFS Trigger: GCTAAATCTCCACTCTTGGTGTTCCTCTGACTTTTGACCATTTCATGCATGGGTGACCTGAGGTTCCAACATGAGGCCACCAAGGCGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR TCA 90 bp | TTCGACATGGGGTCTGGAATTAGCAATCATCTTCCCGGTGTATACTaGAAACATTGGCCTTTTGTAATGAGTTTCAGTAACTTCCATATC | + |
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Preference number: 1 (lower is better) Translates to: FDMGSGISNHLPGVY*KHWPFVMSFSNFHI Trigger: GATATGGAAGTTACTGAAACTCATTACAAAAGGCCAATGTTTTCAGTATACACCGGGAAGATGATTGCTAATTCCAGACCCCATGTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTAGCCCTAACACATTTTaGCCTGAGACTAATCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PCPICPLANAFHVFSIYTSPNTF*PETNPE Trigger: CTCAGGATTAGTCTCAGGCCAAAATGTGTTAGGGCT...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCCAGATGGCAGAGCTATaGCTCAGGCTTTATTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: TASMFCIHLDAKEILRCTQMAEL*LRLYCS Trigger: GGAACAATAAAGCCTGAGTCATAGCTCTGCCATCTG...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR TCA 90 bp | TACAGTGTAAAGCACCTCCTCGTTAAATACAAACGCTCACGTCGTGATGCACTGTTTATGACCTATGACTaGGCAATCTCAGCACTATCT | + |
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Preference number: 2 (lower is better) Translates to: YSVKHLLVKYKRSRRDALFMTYD*AISALS Trigger: AGATAGTGCTGAGATTGCTCAGTCATAGGTCATAAA...CAGTGCATCACGACGTGAGCGTTTGTATTTAACGAGGAGGTGCTTTACACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR GCA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTAAGTCAACAGAGAATTaGTTTGTATGGGCCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: PCPICPLANAFHVFSIYTKSTEN*FVWANH Trigger: ATGGTTGGCCCATACAAAGCAATTCTCTGTTGACTT...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGAAGTCAACAGAGAATTaGTTTGTATGGGCCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: PFMSSPFILNTDHQVPHQKSTEN*FVWANH Trigger: ATGGTTGGCCCATACAAAGCAATTCTCTGTTGACTT...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAACACAGACAAGTCAACAGAGAATTaGTTTGTATGGGCCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: SVRWPMPFMSSPFILNTDKSTEN*FVWANH Trigger: ATGGTTGGCCCATACAAAGCAATTCTCTGTTGACTT...GTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGAGAATTGCTTTGTATaGGCCAACCATGAAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: PFMSSPFILNTDHQVPHQENCFV*ANHEIF Trigger: AAAGATTTCATGGTTGGCCCATACAAAGCAATTCTC...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGAGAATTGCTTTGTATaGGCCAACCATGAAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: AFHVFSIYTEHRPSGSTPENCFV*ANHEIF Trigger: AAAGATTTCATGGTTGGCCCATACAAAGCAATTCTC...TGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGCAACACATACATAAATaGGTAAGTGACAACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: PFMSSPFILNTDHQVPHQQHIHK*VSDNTE Trigger: CTCTGTGTTGTCACTTACCCATTTATGTATGTGTTG...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCCACGCCGCTGCATTTTaGCATCTCACTGTAATTTAT | + |
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Preference number: 2 (lower is better) Translates to: TASMFCIHLDAKEILRCTHAAAF*HLTVIY Trigger: ATAAATTACAGTGAGATGCCAAAATGCAGCGGCGTG...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATTTGGTAATCTGTAGCTaGGACACGCCGCTGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYLVICS*DTPLHF Trigger: AAAATGCAGCGGCGTGTCCCAGCTACAGATTACCAA...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCGCAAATCCTAAAAACTaGATAAAAGTGATGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGANPKN*IKVMRS Trigger: GGATCTCATCACTTTTATCCAGTTTTTAGGATTTGC...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAACAACACATACATAAATaGGTAAGTGACAACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: CPICPLANAFHVFSIYTEQHIHK*VSDNTE Trigger: CTCTGTGTTGTCACTTACCCATTTATGTATGTGTTG...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATGGCAAAAATGTTTTATaGGTCCTTGGCCTCAATGAA | + |
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Preference number: 2 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYGKNVL*VLGLNE Trigger: TTCATTGAGGCCAAGGACTCATAAAACATTTTTGCC...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCGCAAATCCTAAAAACTaGATAAAAGTGATGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: TASMFCIHLDAKEILRCTANPKN*IKVMRS Trigger: GGATCTCATCACTTTTATCCAGTTTTTAGGATTTGC...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATGAGAATTGCTTTGTATaGGCCAACCATGAAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYENCFV*ANHEIF Trigger: AAAGATTTCATGGTTGGCCCATACAAAGCAATTCTC...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CCA 90 bp | CCAACAAAGCAGATTGTTTTGTGTATATACAACAGGTCAGCACTCAAGAGTTTTACAGCTAAGGAGAACTaGAGCTTACTTTCAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: PTKQIVLCIYNRSALKSFTAKEN*SLLSNS Trigger: AGAATTTGAAAGTAAGCTCCAGTTCTCCTTAGCTGT...AAAACTCTTGAGTGCTGACCTGTTGTATATACACAAAACAATCTGCTTTGTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CAA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTAGAAAGGCAGCTGTCCTaGTCACGCCAACACATACAT | + |
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Preference number: 3 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLERQLS*SRQHIH Trigger: ATGTATGTGTTGGCGTGACAAGGACAGCTGCCTTTC...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR TCA 72 bp | GGTGGCCTCATGTTGGAACCTCAGGTCACCCATGCATaGAATGGTCAAAAGTCAGAGGAACACCAAGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GGLMLEPQVTHA*NGQKSEEHQEW Trigger: CCACTCTTGGTGTTCCTCTGACTTTTGACCATTTCATGCATGGGTGACCTGAGGTTCCAACATGAGGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR GCA 72 bp | CCTTGGTGGCCTCATGTTGGAACCTCAGGTCACCCATaGATGAAATGGTCAAAAGTCAGAGGAACACCAAGA | + |
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Preference number: 3 (lower is better) Translates to: PWWPHVGTSGHP*MKWSKVRGTPR Trigger: TCTTGGTGTTCCTCTGACTTTTGACCATTTCATGCATGGGTGACCTGAGGTTCCAACATGAGGCCACCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CAA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTAGAAGTCAACAGAGAATaGCTTTGTATGGGCCAACCA | + |
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Preference number: 3 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLEVNRE*LCMGQP Trigger: TGGTTGGCCCATACAAAGCAATTCTCTGTTGACTTC...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR TCA 72 bp | GTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTaGACACAGACCATCAGGTTCCACACCAGGCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: VGQCLSCLLHLY*TQTIRFHTRRL Trigger: GAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGAAAGGCAGCTGTCCTaGTCACGCCAACACATACAT | + |
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Preference number: 3 (lower is better) Translates to: PFMSSPFILNTDHQVPHQERQLS*SRQHIH Trigger: ATGTATGTGTTGGCGTGACAAGGACAGCTGCCTTTC...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR CCA 72 bp | CCTCATGTTGGAACCTCAGGTCACCCATGCATGAAATaGTCAAAAGTCAGAGGAACACCAAGAGTGGAGATT | + |
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Preference number: 3 (lower is better) Translates to: PHVGTSGHPCMK*SKVRGTPRVEI Trigger: AATCTCCACTCTTGGTGTTCCTCTGACTTTTGACCATTTCATGCATGGGTGACCTGAGGTTCCAACATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR CCA 72 bp | CTGCGTTATAACAATGTGACTATCTTTAATTCGCCTTaGTGGCCTCATGTTGGAACCTCAGGTCACCCATGC | + |
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Preference number: 3 (lower is better) Translates to: LRYNNVTIFNSP*WPHVGTSGHPC Trigger: GCATGGGTGACCTGAGGTTCCAACATGAGGCCACCAAGGCGAATTAAAGATAGTCACATTGTTATAACGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR TCA 72 bp | ACACGCCGCTGCATTTTGGCATCTCATTGTAATTTATaGCCTATGACTGAGCAATCTCAGCACTATCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: TRRCILASHCNL*PMTEQSQHYLG Trigger: GCCGAGATAGTGCTGAGATTGCTCAGTCATAGGTCATAAATTACAATGAGATGCCAAAATGCAGCGGCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR CCA 72 bp | CGTTATAACAATGTGACTATCTTTAATTCGCCTTGGTaGCCTCATGTTGGAACCTCAGGTCACCCATGCATG | + |
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Preference number: 3 (lower is better) Translates to: RYNNVTIFNSPW*PHVGTSGHPCM Trigger: CATGCATGGGTGACCTGAGGTTCCAACATGAGGCCACCAAGGCGAATTAAAGATAGTCACATTGTTATAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR CCA 72 bp | AGGCAGCTGTCCTTGTCACGCCAACACATACATAAATaGGTAAGTGACAACACAGAGGTGTACTCTTATTTC | + |
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Preference number: 3 (lower is better) Translates to: RQLSLSRQHIHK*VSDNTEVYSYF Trigger: GAAATAAGAGTACACCTCTGTGTTGTCACTTACCCATTTATGTATGTGTTGGCGTGACAAGGACAGCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CAA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTCTGAAGGAAAGTTTCTaGAACTTCTCCGATGAACTC | + |
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Preference number: 3 (lower is better) Translates to: PCPICPLANAFHVFSIYTLKESF*NFSDEL Trigger: GAGTTCATCGGAGAAGTTCAAGAAACTTTCCTTCAG...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| 3UTR-3UTR CAA 90 bp | TACAGTGTAAAGCACCTCCTCGTTAAATACAAACGCTCACGTCGTGATGCACTGGGTATAAGCATGACATaGTTGCTGTTTTTCCCACAA | + |
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Preference number: 3 (lower is better) Translates to: YSVKHLLVKYKRSRRDALGISMT*LLFFPQ Trigger: TTGTGGGAAAAACAGCAACAATGTCATGCTTATACC...CAGTGCATCACGACGTGAGCGTTTGTATTTAACGAGGAGGTGCTTTACACTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CAA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCCTGAAGGAAAGTTTCTaGAACTTCTCCGATGAACTC | + |
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Preference number: 3 (lower is better) Translates to: TASMFCIHLDAKEILRCTLKESF*NFSDEL Trigger: GAGTTCATCGGAGAAGTTCAAGAAACTTTCCTTCAG...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR TCA 72 bp | GGGTCTGGAATTAGCAATCATCTTCCCGGTGTATACTaGAAACATTGGCCTTTTGTAATGAGTTTCAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GSGISNHLPGVY*KHWPFVMSFSN Trigger: GTTACTGAAACTCATTACAAAAGGCCAATGTTTTCAGTATACACCGGGAAGATGATTGCTAATTCCAGACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| 3UTR-3UTR CAA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATATAAGCATGACATTGTaGCTGTTTTTCCCACAACTA | + |
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Preference number: 3 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYISMTL*LFFPQL Trigger: TAGTTGTGGGAAAAACAGCAACAATGTCATGCTTAT...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR CCA 90 bp | TACAGTGTAAAGCACCTCCTCGTTAAATACAAACGCTCACGTCGTGATGCACTGGCGGCGGGGTCGCCGTaGCTCCTACCAACCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YSVKHLLVKYKRSRRDALAAGSP*LLPTGC Trigger: GCACCCGGTTGGTAGGAGCCACGGCGACCCCGCCGC...CAGTGCATCACGACGTGAGCGTTTGTATTTAACGAGGAGGTGCTTTACACTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR CCA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGAGCGGCGGGGTCGCCGTaGCTCCTACCAACCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FKQINFSNSQHLKFLGHGAAGSP*LLPTGC Trigger: GCACCCGGTTGGTAGGAGCCACGGCGACCCCGCCGC...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR GCA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTAGTGAGGTTGGCTCTTTaGTCTTTCAGTATCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLVRLAL*SFSIPN Trigger: ATTTGGGATACTGAAAGAGCAAAGAGCCAACCTCAC...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGACCGTACTCTCATCCTaGATTGCCGGGTACCACTTT | + |
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Preference number: 4 (lower is better) Translates to: PFMSSPFILNTDHQVPHQTVLSS*IAGYHF Trigger: AAAGTGGTACCCGGCAATTCAGGATGAGAGTACGGT...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR GCA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTACTCTCATCCTGAATTaGCGGGTACCACTTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCPICPLANAFHVFSIYTTLILN*RVPLCW Trigger: CCAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGT...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR TCA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAAACCGTACTCTCATCCTaGATTGCCGGGTACCACTTT | + |
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Preference number: 4 (lower is better) Translates to: CPICPLANAFHVFSIYTETVLSS*IAGYHF Trigger: AAAGTGGTACCCGGCAATTCAGGATGAGAGTACGGT...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR GCA 90 bp | TACAGTGTAAAGCACCTCCTCGTTAAATACAAACGCTCACGTCGTGATGCACTGTGCCGGGTACCACTTTaGTGGAGTCTTCTATTTAGT | + |
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Preference number: 4 (lower is better) Translates to: YSVKHLLVKYKRSRRDALCRVPL*WSLLFS Trigger: ACTAAATAGAAGACTCCAGCAAAGTGGTACCCGGCA...CAGTGCATCACGACGTGAGCGTTTGTATTTAACGAGGAGGTGCTTTACACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR GCA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAATTTTCGAATCCCAGTTaGTTTCCTGGCTGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CPICPLANAFHVFSIYTEFSNPS*FPGCKA Trigger: GGCCTTGCAGCCAGGAAAGCAACTGGGATTCGAAAA...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR GCA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCTGCCGGGTACCACTTTaGTGGAGTCTTCTATTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGCRVPL*WSLLFS Trigger: ACTAAATAGAAGACTCCAGCAAAGTGGTACCCGGCA...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCTTTTCGAATCCCAGTTaGTTTCCTGGCTGCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TASMFCIHLDAKEILRCTFSNPS*FPGCKA Trigger: GGCCTTGCAGCCAGGAAAGCAACTGGGATTCGAAAA...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
||
| CDS-3UTR GCA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCTCGGAAAAGAAAGGTTaGCTGACGAGTGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGSEKKG*LTSVFL Trigger: CAGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGA...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAACACAGACTCGGAAAAGAAAGGTTaGCTGACGAGTGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRWPMPFMSSPFILNTDSEKKG*LTSVFL Trigger: CAGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGA...GTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGTGAGGTTGGCTCTTTaGTCTTTCAGTATCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFMSSPFILNTDHQVPHQVRLAL*SFSIPN Trigger: ATTTGGGATACTGAAAGAGCAAAGAGCCAACCTCAC...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGCGGGTACCACTTTGCTaGAGTCTTCTATTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFMSSPFILNTDHQVPHQRVPLC*SLLFSL Trigger: AAGACTAAATAGAAGACTCCAGCAAAGTGGTACCCG...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| 3UTR CAA 72 bp | CGTCGTGATGCACTGCATCAATGTTCTGCATACACCTaGATGCAAAGGAAATTTTACGTTGCACCCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRDALHQCSAYT*MQRKFYVAPCL Trigger: TAAACAGGGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGTGCATCACGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGATTCCTCCATTTGTGGTaGAAGTACGCCATTGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: FKQINFSNSQHLKFLGHGFLHLW*KYAIDA Trigger: CGCGTCAATGGCGTACTTCCACCACAAATGGAGGAA...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAAGTCTTGGAAAGTTTTaGTTCTTTCCCTCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AFHVFSIYTEHRPSGSTPSLGKF*FFPSFL Trigger: TAGAAAGGAGGGAAAGAAGCAAAACTTTCCAAGACT...TGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGATCGGAAAAGAAAGGTTaGCTGACGAGTGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKQINFSNSQHLKFLGHGSEKKG*LTSVFL Trigger: CAGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGA...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGACGGGTACCACTTTGCTaGAGTCTTCTATTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKQINFSNSQHLKFLGHGRVPLC*SLLFSL Trigger: AAGACTAAATAGAAGACTCCAGCAAAGTGGTACCCG...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGAAAATTCCTCCATTTGTaGTGGAAGTACGCCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKQINFSNSQHLKFLGHGKFLHL*WKYAID Trigger: GTCAATGGCGTACTTCCACCACAAATGGAGGAATTT...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| 3UTR CAA 72 bp | ATTCCAAGAGAGGGAATTTTTCTCCAACAAAGCAGATaGTTTTGTGTATATACAACAGGTCAGCACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPREGIFLQQSR*FCVYTTGQHSR Trigger: TCTTGAGTGCTGACCTGTTGTATATACACAAAACAATCTGCTTTGTTGGAGAAAAATTCCCTCTCTTGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
||
| CDS-3UTR GCA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATAGTCTTGGAAAGTTTTaGTTCTTTCCCTCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYSLGKF*FFPSFL Trigger: TAGAAAGGAGGGAAAGAAGCAAAACTTTCCAAGACT...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
||
| 3UTR CAA 72 bp | AAGAGAGGGAATTTTTCTCCAACAAAGCAGATTGTTTaGTGTATATACAACAGGTCAGCACTCAAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRGNFSPTKQIV*CIYNRSALKSF Trigger: AAAACTCTTGAGTGCTGACCTGTTGTATATACACAAAACAATCTGCTTTGTTGGAGAAAAATTCCCTCTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS CCA 90 bp | GGACATATCGATTTTGTCCAGGTTCTCATTGCTTCGTGCTTTCGGTaGCGGCGGCGGGGTCGCCGTGGCTCCTACCAACCGGGTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHIDFVQVLIASCFR*RRRGRRGSYQPGAK Trigger: TTTGGCACCCGGTTGGTAGGAGCCACGGCGACCCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS GCA 90 bp | ATCATCCAGGGACATATCGATTTTGTCCAGGTTCTCATTGCTTCGTaGTTTCGGTGGCGGCGGCGGGGTCGCCGTGGCTCCTACCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: IIQGHIDFVQVLIAS*FRWRRRGRRGSYQP Trigger: CGGTTGGTAGGAGCCACGGCGACCCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCCCTGGATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR CAA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTATCTGTCTCAGAAGGCTaGTCTTCCTTTTCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLSVSEG*SSFSML Trigger: CAGCATTGAAAAGGAAGACAAGCCTTCTGAGACAGA...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTACAGACTGTTCTCTTTTaGTCAAGAATGAGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLQTVLF*SRMRAQ Trigger: CTGTGCCCTCATTCTTGACAAAAAGAGAACAGTCTG...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAACACAGACAAGCGGCTTCCTCCTTaGCTGAACGTGAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVRWPMPFMSSPFILNTDKRLPP*LNVRLA Trigger: AGCCAACCTCACGTTCAGCAAAGGAGGAAGCCGCTT...GTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAAAAGCGGCTTCCTCCTTaGCTGAACGTGAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPICPLANAFHVFSIYTEKRLPP*LNVRLA Trigger: AGCCAACCTCACGTTCAGCAAAGGAGGAAGCCGCTT...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS CCA 90 bp | ATTCCCCACCGTACTCTCATCCTGAATTGCCGGGTACCACTTTGCTaGAGTCTTCTATTTAGTCTTGGAAAGTTTTGCTTCTTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPHRTLILNCRVPLC*SLLFSLGKFCFFPS Trigger: GGAGGGAAAGAAGCAAAACTTTCCAAGACTAAATAGAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTACGGTGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCATACTCTCATCCTGAATaGCCGGGTACCACTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFHVFSIYTEHRPSGSTPYSHPE*PGTTLL Trigger: CAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTA...TGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCATCAATGTTCTGCATACACCTTGATGCAAAGGAAATTTTACGTTGCACCAAGCGGCTTCCTCCTTaGCTGAACGTGAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TASMFCIHLDAKEILRCTKRLPP*LNVRLA Trigger: AGCCAACCTCACGTTCAGCAAAGGAGGAAGCCGCTT...GGTGCAACGTAAAATTTCCTTTGCATCAAGGTGTATGCAGAACATTGATGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR CAA 90 bp | TATACTGAACACAGACCATCAGGTTCCACACCAGGCGTCTCCTCCAAGGACCTATCCTTTCTATTCAGTTaGATAATATCATCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YTEHRPSGSTPGVSSKDLSFLFS*IISSRD Trigger: GTCCCTGGATGATATTATCAAACTGAATAGAAAGGA...TAGGTCCTTGGAGGAGACGCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS-3UTR CAA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTCGTGAGGTTGGCTCTTaGCTCTTTCAGTATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PCPICPLANAFHVFSIYTREVGS*LFQYPK Trigger: TTTGGGATACTGAAAGAGCAAAGAGCCAACCTCACG...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCCGTGAGGTTGGCTCTTaGCTCTTTCAGTATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGREVGS*LFQYPK Trigger: TTTGGGATACTGAAAGAGCAAAGAGCCAACCTCACG...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCTCGTGGTTTCTGAGTTaGACGCGTTCTCTTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGSWFLS*TRSLCY Trigger: GTAGCAAAGAGAACGCGTCAAACTCAGAAACCACGA...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171325.9 |
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| CDS-3UTR CAA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGTCTGTCTCAGAAGGCTaGTCTTCCTTTTCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFMSSPFILNTDHQVPHQSVSEG*SSFSML Trigger: CAGCATTGAAAAGGAAGACAAGCCTTCTGAGACAGA...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR CAA 90 bp | CCATGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTTTCGGAAAAGAAAGGTaGCCTGACGAGTGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCPICPLANAFHVFSIYTFGKER*PDECLS Trigger: AGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGAA...AGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCTTCGGAAAAGAAAGGTaGCCTGACGAGTGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGFGKER*PDECLS Trigger: AGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGAA...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCCAGACTGTTCTCTTTTaGTCAAGAATGAGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGQTVLF*SRMRAQ Trigger: CTGTGCCCTCATTCTTGACAAAAAGAGAACAGTCTG...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAATCTGTCTCAGAAGGCTaGTCTTCCTTTTCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPICPLANAFHVFSIYTESVSEG*SSFSML Trigger: CAGCATTGAAAAGGAAGACAAGCCTTCTGAGACAGA...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
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| CDS-3UTR CAA 90 bp | TCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAACACAGACTGTACAGCTCCAGGATaGTCAATGGATACAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVRWPMPFMSSPFILNTDCTAPG*SMDTVK Trigger: TTTGACTGTATCCATTGACAATCCTGGAGCTGTACA...GTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATTACTCTCATCCTGAATaGCCGGGTACCACTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYYSHPE*PGTTLL Trigger: CAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTA...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
||
| CDS-3UTR CAA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGAGCAACTTGTTTCCTTaGTACTTCATTCTGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFMSSPFILNTDHQVPHQSNLFP*YFILSQ Trigger: CTGAGACAGAATGAAGTACAAAGGAAACAAGTTGCT...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGGCAGCAACTTGTTTCCTTaGTACTTCATTCTGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHVFSIYTEHRPSGSTPGSNLFP*YFILSQ Trigger: CTGAGACAGAATGAAGTACAAAGGAAACAAGTTGCT...GCCTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCAATCTGTCCGTTGGCCAATGCCTTTCATGTCTTCTCCATTTATACTGAATCAAAATTCCTCCATTaGTGGTGGAAGTACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CPICPLANAFHVFSIYTESKFLH*WWKYAI Trigger: AATGGCGTACTTCCACCACAAATGGAGGAATTTTGA...TTCAGTATAAATGGAGAAGACATGAAAGGCATTGGCCAACGGACAGATTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTCATGTCTTCTCCATTTATACTGAACACAGACCATCAGGTTCCACACCAGTCCTTTCTATTCAGTTaGATAATATCATCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PFMSSPFILNTDHQVPHQSFLFS*IISSRD Trigger: GTCCCTGGATGATATTATCAAACTGAATAGAAAGGA...CTGGTGTGGAACCTGATGGTCTGTGTTCAGTATAAATGGAGAAGACATGAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGACGTGAGGTTGGCTCTTaGCTCTTTCAGTATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKQINFSNSQHLKFLGHGREVGS*LFQYPK Trigger: TTTGGGATACTGAAAGAGCAAAGAGCCAACCTCACG...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGATTCGGAAAAGAAAGGTaGCCTGACGAGTGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FKQINFSNSQHLKFLGHGFGKER*PDECLS Trigger: AGAAAGACACTCGTCAGGCAACCTTTCTTTTCCGAA...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGATCAAAATTCCTCCATTaGTGGTGGAAGTACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: FKQINFSNSQHLKFLGHGSKFLH*WWKYAI Trigger: AATGGCGTACTTCCACCACAAATGGAGGAATTTTGA...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGCAAATCAACTTTTCAAACAGTCAACACTTAAAGTTCCTTGGACACGGATGTACAGCTCCAGGATaGTCAATGGATACAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKQINFSNSQHLKFLGHGCTAPG*SMDTVK Trigger: TTTGACTGTATCCATTGACAATCCTGGAGCTGTACA...TCCGTGTCCAAGGAACTTTAAGTGTTGACTGTTTGAAAAGTTGATTTGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000232272.2 |
||
| CDS-3UTR CAA 90 bp | TGTATATACAACAGGTCAGCACTCAAGAGTTTTAACTTAGTTGTATCAAAGGCACAGACTGTTCTCTTTTaGTCAAGAATGAGGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: CIYNRSALKSFNLVVSKAQTVLF*SRMRAQ Trigger: CTGTGCCCTCATTCTTGACAAAAAGAGAACAGTCTG...TGCCTTTGATACAACTAAGTTAAAACTCTTGAGTGCTGACCTGTTGTATATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR CAA 90 bp | ACACCTGACACATTAAATACCACAAAACTACTGCCTATGTGTGAAGTCGTTTATAGCAACTTGTTTCCTTaGTACTTCATTCTGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: TPDTLNTTKLLPMCEVVYSNLFP*YFILSQ Trigger: CTGAGACAGAATGAAGTACAAAGGAAACAAGTTGCT...ATAAACGACTTCACACATAGGCAGTAGTTTTGTGGTATTTAATGTGTCAGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS-3UTR CAA 90 bp | TGTATATACAACAGGTCAGCACTCAAGAGTTTTAACTTAGTTGTATCAAAGGCATATCGTTCTATATTCTaGTCACTTAGAGGTGGACGA | + |
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Preference number: 5 (lower is better) Translates to: CIYNRSALKSFNLVVSKAYRSIF*SLRGGR Trigger: TCGTCCACCTCTAAGTGACAAGAATATAGAACGATA...TGCCTTTGATACAACTAAGTTAAAACTCTTGAGTGCTGACCTGTTGTATATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023489.11 |
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| CDS CCA 72 bp | GATTTTGTCCAGGTTCTCATTGCTTCGTGCTTTCGGTaGCGGCGGCGGGGTCGCCGTGGCTCCTACCAACCG | + |
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Preference number: 6 (lower is better) Translates to: DFVQVLIASCFR*RRRGRRGSYQP Trigger: CGGTTGGTAGGAGCCACGGCGACCCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS GCA 72 bp | GGACATATCGATTTTGTCCAGGTTCTCATTGCTTCGTaGTTTCGGTGGCGGCGGCGGGGTCGCCGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GHIDFVQVLIAS*FRWRRRGRRGS Trigger: GGAGCCACGGCGACCCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS CAA 90 bp | TTGATAATATCATCCAGGGACATATCGATTTTGTCCAGGTTCTCATaGCTTCGTGCTTTCGGTGGCGGCGGCGGGGTCGCCGTGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LIISSRDISILSRFS*LRAFGGGGGVAVAP Trigger: AGGAGCCACGGCGACCCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCCCTGGATGATATTATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS TCA 72 bp | CAGAATTCTGCTGGATTCCCCACCGTACTCTCATCCTaGATTGCCGGGTACCACTTTGCTGGAGTCTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: QNSAGFPTVLSS*IAGYHFAGVFY Trigger: ATAGAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTACGGTGGGGAATCCAGCAGAATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS GCA 72 bp | TTCTGCTGGATTCCCCACCGTACTCTCATCCTGAATTaGCGGGTACCACTTTGCTGGAGTCTTCTATTTAGT | + |
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Preference number: 6 (lower is better) Translates to: FCWIPHRTLILN*RVPLCWSLLFS Trigger: ACTAAATAGAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTACGGTGGGGAATCCAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS CAA 90 bp | TCCTTTCTATTCAGTTTGATAATATCATCCAGGGACATATCGATTTaGTCCAGGTTCTCATTGCTTCGTGCTTTCGGTGGCGGCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SFLFSLIISSRDISI*SRFSLLRAFGGGGG Trigger: CCCGCCGCCGCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCCCTGGATGATATTATCAAACTGAATAGAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS CCA 72 bp | CGTACTCTCATCCTGAATTGCCGGGTACCACTTTGCTaGAGTCTTCTATTTAGTCTTGGAAAGTTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTLILNCRVPLC*SLLFSLGKFCF Trigger: GAAGCAAAACTTTCCAAGACTAAATAGAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGGATGAGAGTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS CAA 72 bp | CATTTGTGGTGGAAGTACGCCATTGACGCGTTCTCTTaGCTACCACATCATCTATCAGTTGTTCTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLWWKYAIDAFS*LPHHLSVVLCS Trigger: TGAACACAGAACAACTGATAGATGATGTGGTAGCAAAGAGAACGCGTCAATGGCGTACTTCCACCACAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000120345.2 ENSMUST00000232272.2 |
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| CDS GCA 72 bp | ATTTGTGGTGGAAGTACGCCATTGACGCGTTCTCTTTaGTACCACATCATCTATCAGTTGTTCTGTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ICGGSTPLTRSL*YHIIYQLFCVQ Trigger: TTGAACACAGAACAACTGATAGATGATGTGGTAGCAAAGAGAACGCGTCAATGGCGTACTTCCACCACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023489.11 ENSMUST00000120345.2 ENSMUST00000232272.2 |
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| CDS CAA 72 bp | TTCAGTTTGATAATATCATCCAGGGACATATCGATTTaGTCCAGGTTCTCATTGCTTCGTGCTTTCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: FSLIISSRDISI*SRFSLLRAFGG Trigger: GCCACCGAAAGCACGAAGCAATGAGAACCTGGACAAAATCGATATGTCCCTGGATGATATTATCAAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023489.11 ENSMUST00000171325.9 |
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| CDS CAA 72 bp | GAGTTAATCGTGGTTTCTGAGTTTGACGCGTTCTCTTaGCTACCACATCATCTATCAGTTGTTCTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ELIVVSEFDAFS*LPHHLSVVLCS Trigger: TGAACACAGAACAACTGATAGATGATGTGGTAGCAAAGAGAACGCGTCAAACTCAGAAACCACGATTAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171325.9 |
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