Pregenerated sensors for FYN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019843Ensembl transcript IDs: ENSMUST00000063091.13, ENSMUST00000099967.10, ENSMUST00000126486.8, ENSMUST00000135242.8, ENSMUST00000136659.2, ENSMUST00000146287.8, ENSMUST00000148152.8, ENSMUST00000157009.8
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTaGAGTAATCCCCACTCCGGTCCTGTAGCTATGTGGCCTACGCTG | + |
Preference number: 1 (lower is better) Translates to: ATGLQADTSALLAGF*SNPHSGPVAMWPTL Trigger: CAGCGTAGGCCACATAGCTACAGGACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR CCA 90 bp | CTGGCAGGGTTCTGCAGTAATCCCCACTCCGGTCCTGTAGCTATGTaGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTAT | + |
Preference number: 1 (lower is better) Translates to: LAGFCSNPHSGPVAM*PTLASLHGSTHMVY Trigger: ATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACATAGCTACAGGACCGGAGTGGGGATTACTGCAGAACCCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCACGGTTCTCGCTGCTCTaGGGCAGCTGGCTACAGAAT | + |
Preference number: 2 (lower is better) Translates to: MRPPACRLTPVLCWQGSARFSLL*GSWLQN Trigger: ATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCG...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR TCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTGAGTCACATGCAATCTaGTCCTGGACGGTTCTCGCT | + |
Preference number: 2 (lower is better) Translates to: RWPVSMVAPTWCMYRNICESHAI*SWTVLA Trigger: AGCGAGAACCGTCCAGGATCAGATTGCATGTGACTC...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR TCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACACTAGGCCCTGGGACCTaGAAAAAGTCACATGAACAA | + |
Preference number: 2 (lower is better) Translates to: WSTPDTESHSLAVQDSKTLGPGT*KKSHEQ Trigger: TTGTTCATGTGACTTTTTTCAGGTCCCAGGGCCTAG...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR GCA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTTTGCTGGCAGGGTTCTaGAGTAATCCCCACTCCGGT | + |
Preference number: 2 (lower is better) Translates to: LVVELAGCFLLKMLTPKFLLAGF*SNPHSG Trigger: ACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAA...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR TCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGGAGTCACATGCAATCTaGTCCTGGACGGTTCTCGCT | + |
Preference number: 2 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQESHAI*SWTVLA Trigger: AGCGAGAACCGTCCAGGATCAGATTGCATGTGACTC...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR GCA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATTGCTGGCAGGGTTCTaGAGTAATCCCCACTCCGGT | + |
Preference number: 2 (lower is better) Translates to: NWLAAFCLKCSLLSFKNELLAGF*SNPHSG Trigger: ACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAA...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTAAAGCACTGGGATTGTTaGCACAGGAGCAGCTATTTA | + |
Preference number: 2 (lower is better) Translates to: LASLHGSTHMVYVQEHMLKHWDC*HRSSYL Trigger: TAAATAGCTGCTCCTGTGCCAACAATCCCAGTGCTT...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR CAA 90 bp | GGTCTCCGTCTTGCAGCTCTTGTGGTAGAACTGGCTGGCTGCTTTTaGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTT | + |
Preference number: 2 (lower is better) Translates to: GLRLAALVVELAGCF*LKMLTPKFQERITV Trigger: AACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAGAGCTGCAAGACGGAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR GCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACAGTAGAACTGGCTGGCTaGTTTTTGCTTAAAATGCTC | + |
Preference number: 2 (lower is better) Translates to: WSTPDTESHSLAVQDSKTVELAG*FLLKML Trigger: GAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTAC...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGAGCTGGCTACAGAATTaGAAGCTAATGGGGAGGGGT | + |
Preference number: 2 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQSWLQN*KLMGRG Trigger: ACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTAGCTGGCTACAGAATTaGAAGCTAATGGGGAGGGGT | + |
Preference number: 2 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVSWLQN*KLMGRG Trigger: ACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR TCA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTATGCATTTCCAAGTCTaGGAAATAACACGCTTCTGT | + |
Preference number: 2 (lower is better) Translates to: LVVELAGCFLLKMLTPKFMHFQV*EITRFC Trigger: ACAGAAGCGTGTTATTTCTCAGACTTGGAAATGCAT...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR TCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGATGCATTTCCAAGTCTaGGAAATAACACGCTTCTGT | + |
Preference number: 2 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQMHFQV*EITRFC Trigger: ACAGAAGCGTGTTATTTCTCAGACTTGGAAATGCAT...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR GCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGGCTTTTTGCTTAAAATaGTCACTCCTAAGTTTCAAG | + |
Preference number: 2 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQAFCLK*SLLSFK Trigger: CTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGC...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR CCA 72 bp | AGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTaGCAGGGTTCTGCAGTAATCCCCACTCCGGTCCTG | + |
Preference number: 3 (lower is better) Translates to: RPPACRLTPVLC*QGSAVIPTPVL Trigger: CAGGACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR GCA 72 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTaGTGGCAGGGTTCTGCAGTAATCCCCACTCCGGTC | + |
Preference number: 3 (lower is better) Translates to: MRPPACRLTPVL*WQGSAVIPTPV Trigger: GACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR GCA 72 bp | TTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTaGAGTAATCCCCACTCCGGTCCTGTAGCTATGTGG | + |
Preference number: 3 (lower is better) Translates to: LQADTSALLAGF*SNPHSGPVAMW Trigger: CCACATAGCTACAGGACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CAA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTCAGCTGGCTACAGAATaGGAAGCTAATGGGGAGGGG | + |
Preference number: 3 (lower is better) Translates to: RWPVSMVAPTWCMYRNICQLATE*EANGEG Trigger: CCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCTG...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CAA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAACAGCTGGCTACAGAATaGGAAGCTAATGGGGAGGGG | + |
Preference number: 3 (lower is better) Translates to: NWLAAFCLKCSLLSFKNEQLATE*EANGEG Trigger: CCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCTG...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR TCA 72 bp | TGTAAAGTAGTGCATAGTTATTCACTGGAGCACTCCTaGCACGGAGAGTCACTCATTAGCAGTACAGGACAG | + |
Preference number: 3 (lower is better) Translates to: CKVVHSYSLEHS*HGESLISSTGQ Trigger: CTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCAGTGAATAACTATGCACTACTTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR GCA 72 bp | CTCCGTCTTGCAGCTCTTGTGGTAGAACTGGCTGGCTaGTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAA | + |
Preference number: 3 (lower is better) Translates to: LRLAALVVELAG*FLLKMLTPKFQ Trigger: TTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAGAGCTGCAAGACGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CAA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTAAAGCACTGGGATTGTaGGCACAGGAGCAGCTATTT | + |
Preference number: 3 (lower is better) Translates to: LVVELAGCFLLKMLTPKFKALGL*AQEQLF Trigger: AAATAGCTGCTCCTGTGCCAACAATCCCAGTGCTTT...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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3UTR-3UTR CAA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAAAAAGCACTGGGATTGTaGGCACAGGAGCAGCTATTT | + |
Preference number: 3 (lower is better) Translates to: NWLAAFCLKCSLLSFKNEKALGL*AQEQLF Trigger: AAATAGCTGCTCCTGTGCCAACAATCCCAGTGCTTT...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGAGGGGTGGGGTCTGTaGCATAGCGGTACCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYEGWGL*HSGTQS Trigger: GCTCTGGGTACCGCTATGGCACAGACCCCACCCCTC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGGTCACGCCGAAGCTaGGGTAGTGCTGAGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYRSRRS*GSAEGW Trigger: CCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAAGACGGTGAGTCCCTaGCCCCCAGCTGCGTGGAAG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYKTVSP*PPAAWK Trigger: CTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCGTAGGGTCCCAGTGTaGGAGGAGGAGTTCACACCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYRRVPV*EEEFTP Trigger: GGGTGTGAACTCCTCCTCTCACACTGGGACCCTACG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCATCCAGCAGTGGATCATaGGCTCGTGCAGGGAGATCG | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSASSSGS*ARAGRS Trigger: CGATCTCCCTGCACGAGCTCATGATCCACTGCTGGA...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGAGGGGTGGGGTCTGTaGCATAGCGGTACCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGREGWGL*HSGTQS Trigger: GCTCTGGGTACCGCTATGGCACAGACCCCACCCCTC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCTGTCCCTCCTCTCGTaGGTAGGGTCCCAGTGTGAG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYLSLLS*VGSQCE Trigger: CTCACACTGGGACCCTACGCACGAGAGGAGGGACAG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACGGTACCCAGAGCTCTaGTTCAGGCTGCCGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRRYPEL*FRLPSL Trigger: GAGGGACGGCAGCCTGAACCAGAGCTCTGGGTACCG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAAGGTCACGCCGAAGCTaGGGTAGTGCTGAGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRRSRRS*GSAEGW Trigger: CCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAAAGACGGTGAGTCCCTaGCCCCCAGCTGCGTGGAAG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRKTVSP*PPAAWK Trigger: CTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGATCGGGCAGTCCTGTaGGCAGGGCATCCTATAGCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYDRAVL*AGHPIA Trigger: GGCTATAGGATGCCCTGCCCACAGGACTGCCCGATC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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3UTR CAA 72 bp | AATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTaGCTGGCAGGGTTCTGCAGTAATCCCCACTCCGGT | + |
Preference number: 4 (lower is better) Translates to: NEATGLQADTSA*LAGFCSNPHSG Trigger: ACCGGAGTGGGGATTACTGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACGTAGGGTCCCAGTGTaGGAGGAGGAGTTCACACCC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRRRVPV*EEEFTP Trigger: GGGTGTGAACTCCTCCTCTCACACTGGGACCCTACG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCCAGCAGTGGATCATaGGCTCGTGCAGGGAGATCG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSSSGS*ARAGRS Trigger: CGATCTCCCTGCACGAGCTCATGATCCACTGCTGGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGAGGGGTGGGGTCTGTaGCATAGCGGTACCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIEGWGL*HSGTQS Trigger: GCTCTGGGTACCGCTATGGCACAGACCCCACCCCTC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTGGATCATGAGCTCGTaGAGGGAGATCGGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYWIMSS*REIGQS Trigger: GGACTGCCCGATCTCCCTGCACGAGCTCATGATCCA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCGGTACCCAGAGCTCTaGTTCAGGCTGCCGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIRYPEL*FRLPSL Trigger: GAGGGACGGCAGCCTGAACCAGAGCTCTGGGTACCG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
||
CDS-3UTR CCA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGAAGACGGTGAGTCCCTaGCCCCCAGCTGCGTGGAAG | + |
Preference number: 4 (lower is better) Translates to: MWPTLASLHGSTHMVYVQKTVSP*PPAAWK Trigger: CTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTT...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCAGTGAGTAGGCACCTTTaGTGGTTTCGCTCTCGCGGA | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSAVSRHL*WFRSRG Trigger: TCCGCGAGAGCGAAACCACCAAAGGTGCCTACTCAC...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGATCGGGCAGTCCTGTaGGCAGGGCATCCTATAGCC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRDRAVL*AGHPIA Trigger: GGCTATAGGATGCCCTGCCCACAGGACTGCCCGATC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCAGCAGTGGATCATaGGCTCGTGCAGGGAGATCG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRSSSGS*ARAGRS Trigger: CGATCTCCCTGCACGAGCTCATGATCCACTGCTGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSLAPS*VEVVVV Trigger: AACTACAACAACTTCCACGCAGCTGGGGGCCAGGGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCTGTCCCTCCTCTCGTaGGTAGGGTCCCAGTGTGAG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRILSLLS*VGSQCE Trigger: CTCACACTGGGACCCTACGCACGAGAGGAGGGACAG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCCTCCCGGTTGTTCATaGCTGGGTATGGCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYPPGCS*LGMALF Trigger: GAAGAGTGCCATACCCAGGCATGAACAACCGGGAGG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATGGATCATGAGCTCGTaGAGGGAGATCGGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRWIMSS*REIGQS Trigger: GGACTGCCCGATCTCCCTGCACGAGCTCATGATCCA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGGTAGTGCTGAGGGGTaGGGTCTGTGCCATAGCGGT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIGSAEG*GLCHSG Trigger: ACCGCTATGGCACAGACCCCACCCCTCAGCACTACC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGTGAGTAGGCACCTTTaGTGGTTTCGCTCTCGCGGA | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYVSRHL*WFRSRG Trigger: TCCGCGAGAGCGAAACCACCAAAGGTGCCTACTCAC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTGAGGGGTGGGGTCTGTaGCATAGCGGTACCCAGAGC | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICEGWGL*HSGTQS Trigger: GCTCTGGGTACCGCTATGGCACAGACCCCACCCCTC...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTT | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRSLAPS*VEVVVV Trigger: AACTACAACAACTTCCACGCAGCTGGGGGCCAGGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACCTCCCGGTTGTTCATaGCTGGGTATGGCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRPPGCS*LGMALF Trigger: GAAGAGTGCCATACCCAGGCATGAACAACCGGGAGG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTGGATCATGAGCTCGTaGAGGGAGATCGGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIWIMSS*REIGQS Trigger: GGACTGCCCGATCTCCCTGCACGAGCTCATGATCCA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTAGGTCACGCCGAAGCTaGGGTAGTGCTGAGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICRSRRS*GSAEGW Trigger: CCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCT...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACACTCTTCTGCCTGGATaGAGTCAACTGGAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYTLLPG*SQLEPR Trigger: ACGTGGCTCCAGTTGACTCCATCCAGGCAGAAGAGT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTACCACTCTTCTGCCTaGATGGAGTCAACTGGAGCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYYHSSA*MESTGA Trigger: GGCTCCAGTTGACTCCATCCAGGCAGAAGAGTGGTA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGTGAGTAGGCACCTTTaGTGGTTTCGCTCTCGCGGA | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRVSRHL*WFRSRG Trigger: TCCGCGAGAGCGAAACCACCAAAGGTGCCTACTCAC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCGGAGACATGGTGCCTaGCTTAAGGGTCTTTATGGC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYRRHGA*LKGLYG Trigger: GCCATAAAGACCCTTAAGCCAGGCACCATGTCTCCG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCATCCTTTTTCCAGCAGTaGATCATGAGCTCGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSASFFQQ*IMSSCR Trigger: CCTGCACGAGCTCATGATCCACTGCTGGAAAAAGGA...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACACTGGGCCCGCGTTGTaGTATAGTATCCACCATTGT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYTGPAL*YSIHHC Trigger: ACAATGGTGGATACTATATCACAACGCGGGCCCAGT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTGCTGTACCAGTTGCTaGAGTGTTTCAAACTGGGCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYCCTSC*SVSNWA Trigger: GGCCCAGTTTGAAACACTTCAGCAACTGGTACAGCA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCCTCCCGGTTGTTCATaGCTGGGTATGGCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIPPGCS*LGMALF Trigger: GAAGAGTGCCATACCCAGGCATGAACAACCGGGAGG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACTGGATGGAGTCAACTaGAGCCACGTAATTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRLDGVN*SHVIAG Trigger: CCCAGCAATTACGTGGCTCCAGTTGACTCCATCCAG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAACTCTTCTGCCTGGATaGAGTCAACTGGAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRTLLPG*SQLEPR Trigger: ACGTGGCTCCAGTTGACTCCATCCAGGCAGAAGAGT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATACCACTCTTCTGCCTaGATGGAGTCAACTGGAGCC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRYHSSA*MESTGA Trigger: GGCTCCAGTTGACTCCATCCAGGCAGAAGAGTGGTA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGTGAGTAGGCACCTTTaGTGGTTTCGCTCTCGCGGA | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIVSRHL*WFRSRG Trigger: TCCGCGAGAGCGAAACCACCAAAGGTGCCTACTCAC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACGGAGACATGGTGCCTaGCTTAAGGGTCTTTATGGC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRRRHGA*LKGLYG Trigger: GCCATAAAGACCCTTAAGCCAGGCACCATGTCTCCG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCACATGTCCACAAGGTTTaGCAACTTCAGAGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSAHVHKV*QLQSSS Trigger: GGAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATG...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGTTCATGCCTGGGTATaGCACTCTTCCTTTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYVHAWV*HSSFGD Trigger: GTCACCAAAGGAAGAGTGCCATACCCAGGCATGAAC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCCGGTTGTTCATGCCTaGGTATGGCACTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYPVVHA*VWHSSF Trigger: AAAGGAAGAGTGCCATACCCAGGCATGAACAACCGG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTGATCGGGCAGTCCTGTaGGCAGGGCATCCTATAGCC | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICDRAVL*AGHPIA Trigger: GGCTATAGGATGCCCTGCCCACAGGACTGCCCGATC...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCCTTTTTCCAGCAGTaGATCATGAGCTCGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSFFQQ*IMSSCR Trigger: CCTGCACGAGCTCATGATCCACTGCTGGAAAAAGGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCAACCATCAGCTTTCTCTaGGTAATGCTGTACCAGTTG | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSATISFL*VMLYQL Trigger: CAACTGGTACAGCATTACTCAGAGAAAGCTGATGGT...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063091.13 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGTCATCTTCCGTCCGTaGTTCATAGTCATAAAGCGC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYVIFRP*FIVIKR Trigger: GCGCTTTATGACTATGAAGCACGGACGGAAGATGAC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACACGGTACCCAGAGCTCTaGTTCAGGCTGCCGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTRYPEL*FRLPSL Trigger: GAGGGACGGCAGCCTGAACCAGAGCTCTGGGTACCG...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGAGCCACGTAATTGCTaGGAATGTAACCAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYEPRNC*ECNQFP Trigger: GGGAAACTGGTTACATTCCCAGCAATTACGTGGCTC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCTGGATGGAGTCAACTaGAGCCACGTAATTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRILDGVN*SHVIAG Trigger: CCCAGCAATTACGTGGCTCCAGTTGACTCCATCCAG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
||
CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTACTCTTCTGCCTGGATaGAGTCAACTGGAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRITLLPG*SQLEPR Trigger: ACGTGGCTCCAGTTGACTCCATCCAGGCAGAAGAGT...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
||
CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTACCACTCTTCTGCCTaGATGGAGTCAACTGGAGCC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIYHSSA*MESTGA Trigger: GGCTCCAGTTGACTCCATCCAGGCAGAAGAGTGGTA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCGGAGACATGGTGCCTaGCTTAAGGGTCTTTATGGC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIRRHGA*LKGLYG Trigger: GCCATAAAGACCCTTAAGCCAGGCACCATGTCTCCG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCATGTCCACAAGGTTTaGCAACTTCAGAGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYHVHKV*QLQSSS Trigger: GGAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACCGGTTGTTCATGCCTaGGTATGGCACTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRPVVHA*VWHSSF Trigger: AAAGGAAGAGTGCCATACCCAGGCATGAACAACCGG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
||
CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCTTTTTCCAGCAGTaGATCATGAGCTCGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRSFFQQ*IMSSCR Trigger: CCTGCACGAGCTCATGATCCACTGCTGGAAAAAGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTACTGGGCCCGCGTTGTaGTATAGTATCCACCATTGT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRITGPAL*YSIHHC Trigger: ACAATGGTGGATACTATATCACAACGCGGGCCCAGT...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCATTCCAGGTACCTaGGTAATGCTGTACCAGTTG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRSIPGT*VMLYQL Trigger: CAACTGGTACAGCATTACTCAGGTACCTGGAATGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136659.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTT | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICSLAPS*VEVVVV Trigger: AACTACAACAACTTCCACGCAGCTGGGGGCCAGGGA...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGTCATCTTCCGTCCGTaGTTCATAGTCATAAAGCGC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRVIFRP*FIVIKR Trigger: GCGCTTTATGACTATGAAGCACGGACGGAAGATGAC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGTCTCTCAGCATCTTTaGGGCCAAGTTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYVSQHL*GQVFQS Trigger: ACTTTGGAAAACTTGGCCGCAAAGATGCTGAGAGAC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGAGCCACGTAATTGCTaGGAATGTAACCAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGREPRNC*ECNQFP Trigger: GGGAAACTGGTTACATTCCCAGCAATTACGTGGCTC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGTTCATGCCTGGGTATaGCACTCTTCCTTTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIVHAWV*HSSFGD Trigger: GTCACCAAAGGAAGAGTGCCATACCCAGGCATGAAC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCCGGTTGTTCATGCCTaGGTATGGCACTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIPVVHA*VWHSSF Trigger: AAAGGAAGAGTGCCATACCCAGGCATGAACAACCGG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACAGATCGGGCAGTCCTGTaGGCAGGGCATCCTATAGCC | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTDRAVL*AGHPIA Trigger: GGCTATAGGATGCCCTGCCCACAGGACTGCCCGATC...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTCCTTTTTCCAGCAGTaGATCATGAGCTCGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRISFFQQ*IMSSCR Trigger: CCTGCACGAGCTCATGATCCACTGCTGGAAAAAGGA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAACCATCAGCTTTCTCTaGGTAATGCTGTACCAGTTG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRTISFL*VMLYQL Trigger: CAACTGGTACAGCATTACTCAGAGAAAGCTGATGGT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063091.13 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTATCCAGCAGTGGATCATaGGCTCGTGCAGGGAGATCG | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLSSSGS*ARAGRS Trigger: CGATCTCCCTGCACGAGCTCATGATCCACTGCTGGA...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGCATTTCCCAGTCTCTTaGTCAACTGCAGGGATTCTC | + |
Preference number: 4 (lower is better) Translates to: MWPTLASLHGSTHMVYVQHFPVS*STAGIL Trigger: GAGAATCCCTGCAGTTGATCAAGAGACTGGGAAATG...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCACTCTGTCAGTTTCGCTaGTTCTTTATCCTTACATTG | + |
Preference number: 4 (lower is better) Translates to: MRPPACRLTPVLCWQGSALCQFR*FFILTL Trigger: CAATGTAAGGATAAAGAAGCAGCGAAACTGACAGAG...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTAAGCTCTGGTTCAGGCTaGCGTCCCTCTCCTCTGTCA | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLSSGSG*RPSPLS Trigger: TGACAGAGGAGAGGGACGGCAGCCTGAACCAGAGCT...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAAACAACGAGTCACGTaGAACTTCCCAAGCATCTTT | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYKQRVT*NFPSIF Trigger: AAAGATGCTTGGGAAGTTGCACGTGACTCGTTGTTT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063091.13 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTATGGATCATGAGCTCGTaGAGGGAGATCGGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLWIMSS*REIGQS Trigger: GGACTGCCCGATCTCCCTGCACGAGCTCATGATCCA...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGAGCCACGTAATTGCTaGGAATGTAACCAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIEPRNC*ECNQFP Trigger: GGGAAACTGGTTACATTCCCAGCAATTACGTGGCTC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAAAGAAAGGTACCTCTTaGGTTTCCAAAGGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRKKGTS*VSKGQE Trigger: CTCCTGTCCTTTGGAAACCCAAGAGGTACCTTTCTT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCATGTCCACAAGGTTTaGCAACTTCAGAGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIHVHKV*QLQSSS Trigger: GGAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTACCATCAGCTTTCTCTaGGTAATGCTGTACCAGTTG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRITISFL*VMLYQL Trigger: CAACTGGTACAGCATTACTCAGAGAAAGCTGATGGT...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063091.13 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACACTTGGCATCCCTTTGTaGCAGGGAACTACTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTLGIPL*QGTTRR Trigger: CCGCCTAGTAGTTCCCTGTCACAAAGGGATGCCAAG...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCTCTGTCAGTTTCGCTaGTTCTTTATCCTTACATTG | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYLCQFR*FFILTL Trigger: CAATGTAAGGATAAAGAAGCAGCGAAACTGACAGAG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGTCTCTCAGCATCTTTaGGGCCAAGTTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIVSQHL*GQVFQS Trigger: ACTTTGGAAAACTTGGCCGCAAAGATGCTGAGAGAC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAAAACAACGAGTCACGTaGAACTTCCCAAGCATCTTT | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRKQRVT*NFPSIF Trigger: AAAGATGCTTGGGAAGTTGCACGTGACTCGTTGTTT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063091.13 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTGTGGATATAATTCATaGGCTCGATGTAAGCCATTC | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYCGYNS*ARCKPF Trigger: GAATGGCTTACATCGAGCGCATGAATTATATCCACA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACCAAAGTCAGCAATCTTaGAAATTAGTCCATTCCCCA | + |
Preference number: 4 (lower is better) Translates to: VTCNLILDGSRCSGAAGYQSQQS*KLVHSP Trigger: TGGGGAATGGACTAATTTGCAAGATTGCTGACTTTG...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGAGGTCACGCCGAAGCTaGGGTAGTGCTGAGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQRSRRS*GSAEGW Trigger: CCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCT...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTAAGAAAGGTACCTCTTaGGTTTCCAAAGGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIKKGTS*VSKGQE Trigger: CTCCTGTCCTTTGGAAACCCAAGAGGTACCTTTCTT...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTGTTCATGCCTGGGTATaGCACTCTTCCTTTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICVHAWV*HSSFGD Trigger: GTCACCAAAGGAAGAGTGCCATACCCAGGCATGAAC...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGCGTAGGGTCCCAGTGTaGGAGGAGGAGTTCACACCC | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQRRVPV*EEEFTP Trigger: GGGTGTGAACTCCTCCTCTCACACTGGGACCCTACG...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTAACCTGCGGCTCTCTCTaGGTAATGCTGTACCAGTTG | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLTCGSL*VMLYQL Trigger: CAACTGGTACAGCATTACTCAGAGAGAGCCGCAGGT...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
||
CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACTCTGTCAGTTTCGCTaGTTCTTTATCCTTACATTG | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRLCQFR*FFILTL Trigger: CAATGTAAGGATAAAGAAGCAGCGAAACTGACAGAG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
||
CDS-3UTR GCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGCTGTCCCTCCTCTCGTaGGTAGGGTCCCAGTGTGAG | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQLSLLS*VGSQCE Trigger: CTCACACTGGGACCCTACGCACGAGAGGAGGGACAG...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTGTCATCTTCCGTCCGTaGTTCATAGTCATAAAGCGC | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICVIFRP*FIVIKR Trigger: GCGCTTTATGACTATGAAGCACGGACGGAAGATGAC...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
||
CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATGTGGATATAATTCATaGGCTCGATGTAAGCCATTC | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRCGYNS*ARCKPF Trigger: GAATGGCTTACATCGAGCGCATGAATTATATCCACA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACAAAGTCAGCAATCTTaGAAATTAGTCCATTCCCCA | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRQSQQS*KLVHSP Trigger: TGGGGAATGGACTAATTTGCAAGATTGCTGACTTTG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTACTGGATGGAGTCAACTaGAGCCACGTAATTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLLDGVN*SHVIAG Trigger: CCCAGCAATTACGTGGCTCCAGTTGACTCCATCCAG...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACACAGATCGGTAAGCCTTaGCATCCCTTTGTGACAGGG | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTQIGKP*HPFVTG Trigger: CCCTGTCACAAAGGGATGCCAAGGCTTACCGATCTG...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGGATTTTATAATGTTTaGCGTGGTCCCCTTTCATAT | + |
Preference number: 4 (lower is better) Translates to: SWLQNWKLMGRGREASGRGFYNV*RGPLSY Trigger: ATATGAAAGGGGACCACGTCAAACATTATAAAATCC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR TCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACATGCTGTACCAGTTGCTaGAGTGTTTCAAACTGGGCC | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTCCTSC*SVSNWA Trigger: GGCCCAGTTTGAAACACTTCAGCAACTGGTACAGCA...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCTCTGTCAGTTTCGCTaGTTCTTTATCCTTACATTG | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRILCQFR*FFILTL Trigger: CAATGTAAGGATAAAGAAGCAGCGAAACTGACAGAG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGTGTGGATATAATTCATaGGCTCGATGTAAGCCATTC | + |
Preference number: 4 (lower is better) Translates to: MWPTLASLHGSTHMVYVQCGYNS*ARCKPF Trigger: GAATGGCTTACATCGAGCGCATGAATTATATCCACA...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTGTGGATATAATTCATaGGCTCGATGTAAGCCATTC | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRICGYNS*ARCKPF Trigger: GAATGGCTTACATCGAGCGCATGAATTATATCCACA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGTGGATCATGAGCTCGTaGAGGGAGATCGGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQWIMSS*REIGQS Trigger: GGACTGCCCGATCTCCCTGCACGAGCTCATGATCCA...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGCGGTACCCAGAGCTCTaGTTCAGGCTGCCGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWRYPEL*FRLPSL Trigger: GAGGGACGGCAGCCTGAACCAGAGCTCTGGGTACCG...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTACCGGTTGTTCATGCCTaGGTATGGCACTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLPVVHA*VWHSSF Trigger: AAAGGAAGAGTGCCATACCCAGGCATGAACAACCGG...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGAATTTTTCTCCTTTGTaGAAACTCAGGTCATCTTCC | + |
Preference number: 4 (lower is better) Translates to: MWPTLASLHGSTHMVYVQNFSPL*KLRSSS Trigger: GGAAGATGACCTGAGTTTTCACAAAGGAGAAAAATT...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGGATTTTATAATGTTTaGCGTGGTCCCCTTTCATAT | + |
Preference number: 4 (lower is better) Translates to: CNLILDGSRCSGAAGYRIGFYNV*RGPLSY Trigger: ATATGAAAGGGGACCACGTCAAACATTATAAAATCC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR GCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGCCTCCCGGTTGTTCATaGCTGGGTATGGCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQPPGCS*LGMALF Trigger: GAAGAGTGCCATACCCAGGCATGAACAACCGGGAGG...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTCAAAGTCAGCAATCTTaGAAATTAGTCCATTCCCCA | + |
Preference number: 4 (lower is better) Translates to: RWPVSMVAPTWCMYRNICQSQQS*KLVHSP Trigger: TGGGGAATGGACTAATTTGCAAGATTGCTGACTTTG...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCGGAGACATGGTGCCTaGCTTAAGGGTCTTTATGGC | + |
Preference number: 4 (lower is better) Translates to: LVVELAGCFLLKMLTPKFRRHGA*LKGLYG Trigger: GCCATAAAGACCCTTAAGCCAGGCACCATGTCTCCG...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGACTGGGCCCGCGTTGTaGTATAGTATCCACCATTGT | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQTGPAL*YSIHHC Trigger: ACAATGGTGGATACTATATCACAACGCGGGCCCAGT...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTTGCTGTACCAGTTGCTaGAGTGTTTCAAACTGGGCC | + |
Preference number: 4 (lower is better) Translates to: LVVELAGCFLLKMLTPKFCCTSC*SVSNWA Trigger: GGCCCAGTTTGAAACACTTCAGCAACTGGTACAGCA...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGTCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTT | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWSLAPS*VEVVVV Trigger: AACTACAACAACTTCCACGCAGCTGGGGGCCAGGGA...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAACTGGATGGAGTCAACTaGAGCCACGTAATTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: NWLAAFCLKCSLLSFKNELDGVN*SHVIAG Trigger: CCCAGCAATTACGTGGCTCCAGTTGACTCCATCCAG...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATACCACTCTTCTGCCTaGATGGAGTCAACTGGAGCC | + |
Preference number: 4 (lower is better) Translates to: NWLAAFCLKCSLLSFKNEYHSSA*MESTGA Trigger: GGCTCCAGTTGACTCCATCCAGGCAGAAGAGTGGTA...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACACAAAGTCAGCAATCTTaGAAATTAGTCCATTCCCCA | + |
Preference number: 4 (lower is better) Translates to: WSTPDTESHSLAVQDSKTQSQQS*KLVHSP Trigger: TGGGGAATGGACTAATTTGCAAGATTGCTGACTTTG...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTGTGAGTAGGCACCTTTaGTGGTTTCGCTCTCGCGGA | + |
Preference number: 4 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVVSRHL*WFRSRG Trigger: TCCGCGAGAGCGAAACCACCAAAGGTGCCTACTCAC...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR TCA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTAAATTTTTCTCCTTTGTaGAAACTCAGGTCATCTTCC | + |
Preference number: 4 (lower is better) Translates to: LASLHGSTHMVYVQEHMLNFSPL*KLRSSS Trigger: GGAAGATGACCTGAGTTTTCACAAAGGAGAAAAATT...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGGTCTCTCAGCATCTTTaGGGCCAAGTTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQVSQHL*GQVFQS Trigger: ACTTTGGAAAACTTGGCCGCAAAGATGCTGAGAGAC...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTAGTCTCTTGATCAACTaGAGGGATTCTCGAGGGATT | + |
Preference number: 4 (lower is better) Translates to: LVVELAGCFLLKMLTPKFSLLIN*RDSRGI Trigger: AATCCCTCGAGAATCCCTGCAGTTGATCAAGAGACT...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAAGAGCCACGTAATTGCTaGGAATGTAACCAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: NWLAAFCLKCSLLSFKNEEPRNC*ECNQFP Trigger: GGGAAACTGGTTACATTCCCAGCAATTACGTGGCTC...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTTACCACTCTTCTGCCTaGATGGAGTCAACTGGAGCC | + |
Preference number: 4 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVYHSSA*MESTGA Trigger: GGCTCCAGTTGACTCCATCCAGGCAGAAGAGTGGTA...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGCCGGTTGTTCATGCCTaGGTATGGCACTCTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWPVVHA*VWHSSF Trigger: AAAGGAAGAGTGCCATACCCAGGCATGAACAACCGG...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGGTCATCTTCCGTCCGTaGTTCATAGTCATAAAGCGC | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWVIFRP*FIVIKR Trigger: GCGCTTTATGACTATGAAGCACGGACGGAAGATGAC...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | AACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAAGTCTCTCAGCATCTTTaGGGCCAAGTTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: NWLAAFCLKCSLLSFKNEVSQHL*GQVFQS Trigger: ACTTTGGAAAACTTGGCCGCAAAGATGCTGAGAGAC...TTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTGTTCATGCCTGGGTATaGCACTCTTCCTTTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVVHAWV*HSSFGD Trigger: GTCACCAAAGGAAGAGTGCCATACCCAGGCATGAAC...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTTCCTTTTTCCAGCAGTaGATCATGAGCTCGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVSFFQQ*IMSSCR Trigger: CCTGCACGAGCTCATGATCCACTGCTGGAAAAAGGA...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGAAGAAAGGTACCTCTTaGGTTTCCAAAGGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWKKGTS*VSKGQE Trigger: CTCCTGTCCTTTGGAAACCCAAGAGGTACCTTTCTT...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR GCA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGAAACAACGAGTCACGTaGAACTTCCCAAGCATCTTT | + |
Preference number: 4 (lower is better) Translates to: FLLKMLTPKFQERITVRWKQRVT*NFPSIF Trigger: AAAGATGCTTGGGAAGTTGCACGTGACTCGTTGTTT...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063091.13 |
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CDS-3UTR CCA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTAAGAAAGGTACCTCTTaGGTTTCCAAAGGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVKKGTS*VSKGQE Trigger: CTCCTGTCCTTTGGAAACCCAAGAGGTACCTTTCTT...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS CCA 90 bp | AGTTCGGGATGGAGGTCACGCCGAAGCTGGGGTAGTGCTGAGGGGTaGGGTCTGTGCCATAGCGGTACCCAGAGCTCTGGTTCAGGCTGC | + |
Preference number: 5 (lower is better) Translates to: SSGWRSRRSWGSAEG*GLCHSGTQSSGSGC Trigger: GCAGCCTGAACCAGAGCTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCTCCATCCCGAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS TCA 90 bp | AACAGTGTCACTCCTGTCCCTCCTCTCGTGCGTAGGGTCCCAGTGTaGGAGGAGGAGTTCACACCCCCAAAGACGGTGAGTCCCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: NSVTPVPPLVRRVPV*EEEFTPPKTVSPWP Trigger: GGGCCAGGGACTCACCGTCTTTGGGGGTGTGAACTCCTCCTCTCACACTGGGACCCTACGCACGAGAGGAGGGACAGGAGTGACACTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
||
CDS GCA 90 bp | GGAGGAGTTCACACCCCCAAAGACGGTGAGTCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTTCGGGATGGAGGTCACGCCGAAGCT | + |
Preference number: 5 (lower is better) Translates to: GGVHTPKDGESLAPS*VEVVVVRDGGHAEA Trigger: AGCTTCGGCGTGACCTCCATCCCGAACTACAACAACTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTTTGGGGGTGTGAACTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS CCA 90 bp | CTGCGTGGAAGTTGTTGTAGTTCGGGATGGAGGTCACGCCGAAGCTaGGGTAGTGCTGAGGGGTGGGGTCTGTGCCATAGCGGTACCCAG | + |
Preference number: 5 (lower is better) Translates to: LRGSCCSSGWRSRRS*GSAEGWGLCHSGTQ Trigger: CTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCTCCATCCCGAACTACAACAACTTCCACGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS TCA 90 bp | GTAGGGTCCCAGTGTGAGAGGAGGAGTTCACACCCCCAAAGACGGTaGGTCCCTGGCCCCCAGCTGCGTGGAAGTTGTTGTAGTTCGGGA | + |
Preference number: 5 (lower is better) Translates to: VGSQCERRSSHPQRR*VPGPQLRGSCCSSG Trigger: TCCCGAACTACAACAACTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTTTGGGGGTGTGAACTCCTCCTCTCACACTGGGACCCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAACCAGTTTCCCCGGTaGTCAAGGAGCGGGCTTCCC | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYNQFPR*SRSGLP Trigger: GGGAAGCCCGCTCCTTGACAACCGGGGAAACTGGTT...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCCAGCACCTCCCGGTaGTTCATGCCTGGGTATGGC | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSSTSR*FMPGYG Trigger: GCCATACCCAGGCATGAACAACCGGGAGGTGCTGGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAAACCAGTTTCCCCGGTaGTCAAGGAGCGGGCTTCCC | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRNQFPR*SRSGLP Trigger: GGGAAGCCCGCTCCTTGACAACCGGGGAAACTGGTT...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCAGCACCTCCCGGTaGTTCATGCCTGGGTATGGC | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRSSTSR*FMPGYG Trigger: GCCATACCCAGGCATGAACAACCGGGAGGTGCTGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS GCA 90 bp | GGGTGGGGTCTGTGCCATAGCGGTACCCAGAGCTCTGGTTCAGGCTaGCGTCCCTCTCCTCTGTCAGTTTCGCTGCTTCTTTATCCTTAC | + |
Preference number: 5 (lower is better) Translates to: GWGLCHSGTQSSGSG*RPSPLSVSLLLYPY Trigger: GTAAGGATAAAGAAGCAGCGAAACTGACAGAGGAGAGGGACGGCAGCCTGAACCAGAGCTCTGGGTACCGCTATGGCACAGACCCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 ENSMUST00000157009.8 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTAACCAGTTTCCCCGGTaGTCAAGGAGCGGGCTTCCC | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRINQFPR*SRSGLP Trigger: GGGAAGCCCGCTCCTTGACAACCGGGGAAACTGGTT...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGTCCAGCACCTCCCGGTaGTTCATGCCTGGGTATGGC | + |
Preference number: 5 (lower is better) Translates to: MWPTLASLHGSTHMVYVQSSTSR*FMPGYG Trigger: GCCATACCCAGGCATGAACAACCGGGAGGTGCTGGA...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTCCAGCACCTCCCGGTaGTTCATGCCTGGGTATGGC | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRISSTSR*FMPGYG Trigger: GCCATACCCAGGCATGAACAACCGGGAGGTGCTGGA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCAAGCAAACTTCCTTaGCTCATGTACTCCGTGACG | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSSKLP*LMYSVT Trigger: CGTCACGGAGTACATGAGCAAAGGAAGTTTGCTTGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGACCATGTCCACAAGGTTaGGCAACTTCAGAGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRPCPQG*ATSELF Trigger: GAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATGG...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACTCCCCACTAGAATGTTaGCTGATCGCAGATCTCTGT | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYSPLEC*LIADLC Trigger: ACAGAGATCTGCGATCAGCAAACATTCTAGTGGGGA...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCAGACCATACGTCAGACTaGATTGTGAACCTTCCATAC | + |
Preference number: 5 (lower is better) Translates to: MRPPACRLTPVLCWQGSADHTSD*IVNLPY Trigger: GTATGGAAGGTTCACAATCAAGTCTGACGTATGGTC...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATATGGCACTCTTCCTTaGGTGACCAGCTCTGTGAGT | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRYGTLP*VTSSVS Trigger: ACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCATA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | ATGAGGCCACCGGCTTGCAGGCTGACACCAGTGCTTTGCTGGCAGGGTTCTGCACAGACATCTTTGGTTTaGACAGACAGATCGGTAAGC | + |
Preference number: 5 (lower is better) Translates to: MRPPACRLTPVLCWQGSAQTSLV*TDRSVS Trigger: GCTTACCGATCTGTCTGTCAAAACCAAAGATGTCTG...TGCAGAACCCTGCCAGCAAAGCACTGGTGTCAGCCTGCAAGCCGGTGGCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS TCA 90 bp | TCTTTGGTTTTGACAGACAGATCGGTAAGCCTTGGCATCCCTTTGTaGCAGGGAACTACTAGGCGGCAGCAGAGACCTGCGGCTCTCTCT | + |
Preference number: 5 (lower is better) Translates to: SLVLTDRSVSLGIPL*QGTTRRQQRPAALS Trigger: AGAGAGAGCCGCAGGTCTCTGCTGCCGCCTAGTAGTTCCCTGTCACAAAGGGATGCCAAGGCTTACCGATCTGTCTGTCAAAACCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCAAGCAAACTTCCTTaGCTCATGTACTCCGTGACG | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRSSKLP*LMYSVT Trigger: CGTCACGGAGTACATGAGCAAAGGAAGTTTGCTTGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTCCATGTCCACAAGGTTaGGCAACTTCAGAGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRIPCPQG*ATSELF Trigger: GAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATGG...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGATCCCCACTAGAATGTTaGCTGATCGCAGATCTCTGT | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRSPLEC*LIADLC Trigger: ACAGAGATCTGCGATCAGCAAACATTCTAGTGGGGA...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGGGAAACTTCGCACCTaGTCTTGCTGTGTATTCATT | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYGKLRT*SCCVFI Trigger: AATGAATACACAGCAAGACAAGGTGCGAAGTTTCCC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGACCATACGTCAGACTaGATTGTGAACCTTCCATAC | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYDHTSD*IVNLPY Trigger: GTATGGAAGGTTCACAATCAAGTCTGACGTATGGTC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTATGGCACTCTTCCTTaGGTGACCAGCTCTGTGAGT | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRIYGTLP*VTSSVS Trigger: ACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCATA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | TGGAGCACTCCTGACACGGAGAGTCACTCATTAGCAGTACAGGACAGTAAAACATCCAGCACCTCCCGGTaGTTCATGCCTGGGTATGGC | + |
Preference number: 5 (lower is better) Translates to: WSTPDTESHSLAVQDSKTSSTSR*FMPGYG Trigger: GCCATACCCAGGCATGAACAACCGGGAGGTGCTGGA...TGTTTTACTGTCCTGTACTGCTAATGAGTGACTCTCCGTGTCAGGAGTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS GCA 90 bp | GTATTTCCATTCCAGGTACCAAGCCACACTTCAGCGAAACACCCCTaGCCCAGCTTCTTCTCCAGAAACAACGAGTCACGTGCAACTTCC | + |
Preference number: 5 (lower is better) Translates to: VFPFQVPSHTSAKHP*PSFFSRNNESRATS Trigger: GGAAGTTGCACGTGACTCGTTGTTTCTGGAGAAGAAGCTGGGGCAGGGGTGTTTCGCTGAAGTGTGGCTTGGTACCTGGAATGGAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063091.13 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | GTCACATGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACGTAATGCTGTACCAGTaGCTGAAGTGTTTCAAACTG | + |
Preference number: 5 (lower is better) Translates to: VTCNLILDGSRCSGAAGYVMLYQ*LKCFKL Trigger: CAGTTTGAAACACTTCAGCAACTGGTACAGCATTAC...GTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCATGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | ATGTGGCCTACGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGTCAAGCAAACTTCCTTaGCTCATGTACTCCGTGACG | + |
Preference number: 5 (lower is better) Translates to: MWPTLASLHGSTHMVYVQSSKLP*LMYSVT Trigger: CGTCACGGAGTACATGAGCAAAGGAAGTTTGCTTGA...CTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCGTAGGCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTTCAAGCAAACTTCCTTaGCTCATGTACTCCGTGACG | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRISSKLP*LMYSVT Trigger: CGTCACGGAGTACATGAGCAAAGGAAGTTTGCTTGA...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGGGAAACTTCGCACCTaGTCTTGCTGTGTATTCATT | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRGKLRT*SCCVFI Trigger: AATGAATACACAGCAAGACAAGGTGCGAAGTTTCCC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGACCATACGTCAGACTaGATTGTGAACCTTCCATAC | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRDHTSD*IVNLPY Trigger: GTATGGAAGGTTCACAATCAAGTCTGACGTATGGTC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTCGGGAAGAGTAATGCTGTACCAGTaGCTGAAGTGTTTCAAACTG | + |
Preference number: 5 (lower is better) Translates to: SWLQNWKLMGRGREASGRVMLYQ*LKCFKL Trigger: CAGTTTGAAACACTTCAGCAACTGGTACAGCATTAC...TCTTCCCGAGGCCTCCCTACCCCTCCCCATTAGCTTCCAATTCTGTAGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | CGCTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTCCATGTCCACAAGGTTaGGCAACTTCAGAGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: RWPVSMVAPTWCMYRNICPCPQG*ATSELF Trigger: GAAGAGCTCTGAAGTTGCCAAACCTTGTGGACATGG...ACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | TGCAATCTGATCCTGGACGGTTCTCGCTGCTCTGGGGCAGCTGGCTACAGAATTGTAATGCTGTACCAGTaGCTGAAGTGTTTCAAACTG | + |
Preference number: 5 (lower is better) Translates to: CNLILDGSRCSGAAGYRIVMLYQ*LKCFKL Trigger: CAGTTTGAAACACTTCAGCAACTGGTACAGCATTAC...AATTCTGTAGCCAGCTGCCCCAGAGCAGCGAGAACCGTCCAGGATCAGATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS-3UTR CAA 90 bp | TTTTTGCTTAAAATGCTCACTCCTAAGTTTCAAGAACGAATCACAGTTCGCTGGAACCAGTTTCCCCGGTaGTCAAGGAGCGGGCTTCCC | + |
Preference number: 5 (lower is better) Translates to: FLLKMLTPKFQERITVRWNQFPR*SRSGLP Trigger: GGGAAGCCCGCTCCTTGACAACCGGGGAAACTGGTT...CCAGCGAACTGTGATTCGTTCTTGAAACTTAGGAGTGAGCATTTTAAGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTATGTCTCTCAGCATCTTaGCGGCCAAGTTTTCCAAAG | + |
Preference number: 5 (lower is better) Translates to: LASLHGSTHMVYVQEHMLCLSAS*RPSFPK Trigger: CTTTGGAAAACTTGGCCGCAAAGATGCTGAGAGACA...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | CTGGCCAGTCTCCATGGTAGCACCCACATGGTGTATGTACAGGAACATATGTTACCATTTCCCAGTCTCTaGATCAACTGCAGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: LASLHGSTHMVYVQEHMLPFPSL*INCRDS Trigger: AGAATCCCTGCAGTTGATCAAGAGACTGGGAAATGG...TAACATATGTTCCTGTACATACACCATGTGGGTGCTACCATGGAGACTGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTTATGGCACTCTTCCTTaGGTGACCAGCTCTGTGAGT | + |
Preference number: 5 (lower is better) Translates to: LVVELAGCFLLKMLTPKFYGTLP*VTSSVS Trigger: ACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCATA...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | AACCCTTCAGCATTCATATTTATACAGGAAGTTTGTGTGGTCTCCGTCTTGCAGTCCCCACTAGAATGTTaGCTGATCGCAGATCTCTGT | + |
Preference number: 5 (lower is better) Translates to: NPSAFIFIQEVCVVSVLQSPLEC*LIADLC Trigger: ACAGAGATCTGCGATCAGCAAACATTCTAGTGGGGA...CTGCAAGACGGAGACCACACAAACTTCCTGTATAAATATGAATGCTGAAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTGGGAAACTTCGCACCTaGTCTTGCTGTGTATTCATT | + |
Preference number: 5 (lower is better) Translates to: LVVELAGCFLLKMLTPKFGKLRT*SCCVFI Trigger: AATGAATACACAGCAAGACAAGGTGCGAAGTTTCCC...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | CTTGTGGTAGAACTGGCTGGCTGCTTTTTGCTTAAAATGCTCACTCCTAAGTTTGACCATACGTCAGACTaGATTGTGAACCTTCCATAC | + |
Preference number: 5 (lower is better) Translates to: LVVELAGCFLLKMLTPKFDHTSD*IVNLPY Trigger: GTATGGAAGGTTCACAATCAAGTCTGACGTATGGTC...AAACTTAGGAGTGAGCATTTTAAGCAAAAAGCAGCCAGCCAGTTCTACCACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTTATGGCACTCTTCCTTaGGTGACCAGCTCTGTGAGT | + |
Preference number: 5 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVYGTLP*VTSSVS Trigger: ACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCATA...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS-3UTR CAA 90 bp | TTAGTAGGTTGCCATGACTACAATGCTATGGGTTTAGACCATTTAAATGTGGTTTCAAGCAAACTTCCTTaGCTCATGTACTCCGTGACG | + |
Preference number: 5 (lower is better) Translates to: LVGCHDYNAMGLDHLNVVSSKLP*LMYSVT Trigger: CGTCACGGAGTACATGAGCAAAGGAAGTTTGCTTGA...AACCACATTTAAATGGTCTAAACCCATAGCATTGTAGTCATGGCAACCTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 |
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CDS CCA 72 bp | TGGAGGTCACGCCGAAGCTGGGGTAGTGCTGAGGGGTaGGGTCTGTGCCATAGCGGTACCCAGAGCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: WRSRRSWGSAEG*GLCHSGTQSSG Trigger: ACCAGAGCTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGCGTGACCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS CCA 72 bp | GGCCCCCAGCTGCGTGGAAGTTGTTGTAGTTCGGGATaGAGGTCACGCCGAAGCTGGGGTAGTGCTGAGGGG | + |
Preference number: 6 (lower is better) Translates to: GPQLRGSCCSSG*RSRRSWGSAEG Trigger: CCCCTCAGCACTACCCCAGCTTCGGCGTGACCTCCATCCCGAACTACAACAACTTCCACGCAGCTGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS GCA 72 bp | CACACCCCCAAAGACGGTGAGTCCCTGGCCCCCAGCTaGGTGGAAGTTGTTGTAGTTCGGGATGGAGGTCAC | + |
Preference number: 6 (lower is better) Translates to: HTPKDGESLAPS*VEVVVVRDGGH Trigger: GTGACCTCCATCCCGAACTACAACAACTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTTTGGGGGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS TCA 72 bp | CAGTGTGAGAGGAGGAGTTCACACCCCCAAAGACGGTaGGTCCCTGGCCCCCAGCTGCGTGGAAGTTGTTGT | + |
Preference number: 6 (lower is better) Translates to: QCERRSSHPQRR*VPGPQLRGSCC Trigger: ACAACAACTTCCACGCAGCTGGGGGCCAGGGACTCACCGTCTTTGGGGGTGTGAACTCCTCCTCTCACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS TCA 72 bp | ACTCCTGTCCCTCCTCTCGTGCGTAGGGTCCCAGTGTaGGAGGAGGAGTTCACACCCCCAAAGACGGTGAGT | + |
Preference number: 6 (lower is better) Translates to: TPVPPLVRRVPV*EEEFTPPKTVS Trigger: ACTCACCGTCTTTGGGGGTGTGAACTCCTCCTCTCACACTGGGACCCTACGCACGAGAGGAGGGACAGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS GCA 72 bp | GCGCCACAAACAGTGTCACTCCTGTCCCTCCTCTCGTaGGTAGGGTCCCAGTGTGAGAGGAGGAGTTCACAC | + |
Preference number: 6 (lower is better) Translates to: APQTVSLLSLLS*VGSQCERRSSH Trigger: GTGTGAACTCCTCCTCTCACACTGGGACCCTACGCACGAGAGGAGGGACAGGAGTGACACTGTTTGTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 ENSMUST00000148152.8 |
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CDS TCA 72 bp | TTGACAGACAGATCGGTAAGCCTTGGCATCCCTTTGTaGCAGGGAACTACTAGGCGGCAGCAGAGACCTGCG | + |
Preference number: 6 (lower is better) Translates to: LTDRSVSLGIPL*QGTTRRQQRPA Trigger: CGCAGGTCTCTGCTGCCGCCTAGTAGTTCCCTGTCACAAAGGGATGCCAAGGCTTACCGATCTGTCTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099967.10 |
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CDS CCA 72 bp | GGTGGTTTCGCTCTCGCGGATAAGAAAGGTACCTCTTaGGTTTCCAAAGGACAGGAGCTGTCTCTCAGCATC | + |
Preference number: 6 (lower is better) Translates to: GGFALADKKGTS*VSKGQELSLSI Trigger: GATGCTGAGAGACAGCTCCTGTCCTTTGGAAACCCAAGAGGTACCTTTCTTATCCGCGAGAGCGAAACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |
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CDS CAA 72 bp | CAATCTTGCAAATTAGTCCATTCCCCACTAGAATGTTaGCTGATCGCAGATCTCTGTGGATATAATTCATGC | + |
Preference number: 6 (lower is better) Translates to: QSCKLVHSPLEC*LIADLCGYNSC Trigger: GCATGAATTATATCCACAGAGATCTGCGATCAGCAAACATTCTAGTGGGGAATGGACTAATTTGCAAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8 ENSMUST00000135242.8 ENSMUST00000136659.2 ENSMUST00000146287.8 |