Pregenerated sensors for FYB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022148Ensembl transcript IDs: ENSMUST00000090461.12, ENSMUST00000163073.2, ENSMUST00000226412.2, ENSMUST00000227175.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCTCGTGCGAAGGTAATCCCTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTGGAGGAGGGAAGTCTaGGGCATCCACATCATCGTA | + |
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Preference number: 4 (lower is better) Translates to: SRAKVIPLLPTTPNRFLSWRREV*GIHIIV Trigger: TACGATGATGTGGATGCCTCAGACTTCCCTCCTCCA...AGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAGGGATTACCTTCGCACGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR GCA 90 bp | CTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATTTCTGAGAAACTCTCCTTGACTCATCTCTaGAGGTGGAGGAGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LFSLQHQIVFCLCISEKLSLTHL*RWRREV Trigger: GACTTCCCTCCTCCACCTGCAGAGATGAGTCAAGGA...GAGTTTCTCAGAAATGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATTTCTGAGAAACTCATACTGTGGAGGGCGCTaGAGGAGACTTACCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPYNTKSFSVFAFLRNSYCGGR*RRLTIS Trigger: GCTGATGGTAAGTCTCCTGCAGCGCCCTCCACAGTA...TGAGTTTCTCAGAAATGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR CCA 90 bp | TCTCGTGCGAAGGTAATCCCTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTCCTGCAGAGAACTTTaGTGTCATCTGTGCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SRAKVIPLLPTTPNRFLSSCREL*CHLCFV Trigger: TACAAAGCACAGATGACACCAAAGTTCTCTGCAGGA...AGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAGGGATTACCTTCGCACGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR GCA 90 bp | TGCGAAGGTAATCCCTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCAGGACATAACCATATTTaGCCTCTTCATTCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CEGNPSSPYNTKSFSVFAGHNHI*PLHSCR Trigger: TCTGCAGGAATGAAGAGGGCAAATATGGTTATGTCC...TGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAGGGATTACCTTCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATTTCTGAGAAACTCATTTTCACTGTTACTGTaGAGGGCGCTGCAGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: SSPYNTKSFSVFAFLRNSFSLLL*RALQET Trigger: AGTCTCCTGCAGCGCCCTCCACAGTAACAGTGAAAA...TGAGTTTCTCAGAAATGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS-3UTR GCA 90 bp | AATCCCTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATTTCTGAGATTTCTCTTCCGTTTTTaGCCTTCCAACACTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: NPSSPYNTKSFSVFAFLRFLFRF*PSNTHS Trigger: GGAATGAGTGTTGGAAGGGCAAAAACGGAAGAGAAA...TCTCAGAAATGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAGGGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS CCA 90 bp | TCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTTGGGTaGAGGCGGGCCCAAGACGGACAGGGGTGGCAGGGCCTTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SESGQVNVGWSVGLG*RRAQDGQGWQGLLL Trigger: AAGCAGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | CCTTTCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTTaGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGCAGGGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PFGIWSGQRWVVCWA*VEAGPRRTGVAGPS Trigger: AGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | AGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTTaGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SQPFGIWSGQRWVVC*AWVEAGPRRTGVAG Trigger: CCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | TGGTCTGTTGGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGGGTaGCAGGGCCTTCTGCTTCGGGGTTGCAGAATTCTTGTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WSVGLGWRRAQDGQG*QGLLLRGCRILVSF Trigger: GAAGGAGACAAGAATTCTGCAACCCCGAAGCAGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | GTTTGCAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTaGTCTGTTGGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: VCRVSLSESGQVNVG*SVGLGWRRAQDGQG Trigger: CCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | CGCTGGCAGAGGTGGCTGGCTGGCTGGATGTGTAGGCGGAGGTGGTaGCAGGGAAGTTGTCGAGTAAGGTGTCTGGCTTTTGGTGGCACT | + |
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Preference number: 5 (lower is better) Translates to: RWQRWLAGWMCRRRW*QGSCRVRCLAFGGT Trigger: AGTGCCACCAAAAGCCAGACACCTTACTCGACAACTTCCCTGCCACCACCTCCGCCTACACATCCAGCCAGCCAGCCACCTCTGCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | CACTGTTTGCAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTaGGTGGTCTGTTGGGCTTGGGTGGAGGCGGGCCCAAGACGGACA | + |
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Preference number: 5 (lower is better) Translates to: HCLQSQPFGIWSGQR*VVCWAWVEAGPRRT Trigger: TGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | TTCCTTCTCAGGCTTCTCCTCGTAGGTAGGTTTCGCTGCCAAGGGTaGTTTTGTGGTCCCAAATTTAGGCATGCTGCTGGGTCCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: FLLRLLLVGRFRCQG*FCGPKFRHAAGSCG Trigger: CCCGCAGGACCCAGCAGCATGCCTAAATTTGGGACCACAAAACCACCCTTGGCAGCGAAACCTACCTACGAGGAGAAGCCTGAGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS CCA 90 bp | GCGGAGGTGGTGGCAGGGAAGTTGTCGAGTAAGGTGTCTGGCTTTTaGTGGCACTGTTTGCAGAGTCAGCCTTTCGGAATCTGGTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AEVVAGKLSSKVSGF*WHCLQSQPFGIWSG Trigger: ACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTGCCACCAAAAGCCAGACACCTTACTCGACAACTTCCCTGCCACCACCTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 90 bp | TCTTTCTTGATTGTATTCCAGAAGGCGAGCTTTGTCCTGCAACTTTaGAGGGCCTGCTGCTGGTGGCGGCCTCCTCTGTCGGGTTACTCC | + |
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Preference number: 5 (lower is better) Translates to: SFLIVFQKASFVLQL*RACCWWRPPLSGYS Trigger: GGAGTAACCCGACAGAGGAGGCCGCCACCAGCAGCAGGCCCTTCAAAGTTGCAGGACAAAGCTCGCCTTCTGGAATACAATCAAGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS TCA 90 bp | GCTCCCTCTGCTCGCAGCAGGTTTCAGAACCACTCCAGGAAAGGGTaGACTTGGTGCTCCATGGTCTTTATCCTCTGGGTCTTCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: APSARSRFQNHSRKG*TWCSMVFILWVFLR Trigger: CCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCACCAAGTTCACCCTTTCCTGGAGTGGTTCTGAAACCTGCTGCGAGCAGAGGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS GCA 90 bp | CAGGGAAGTTGTCGAGTAAGGTGTCTGGCTTTTGGTGGCACTGTTTaGAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QGSCRVRCLAFGGTV*RVSLSESGQVNVGW Trigger: CCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTGCCACCAAAAGCCAGACACCTTACTCGACAACTTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | GGGGATCCTTTCTGGACAGGCACGTTCTTAGAAGTGTTCTCTTCCTaGGAGTCCTCTGTGCTTAGGGATGGCTTCTGGCCAAAGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GDPFWTGTFLEVFSS*ESSVLRDGFWPKVC Trigger: ACACACCTTTGGCCAGAAGCCATCCCTAAGCACAGAGGACTCCCAGGAAGAGAACACTTCTAAGAACGTGCCTGTCCAGAAAGGATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | GAAGTGTTCTCTTCCTGGGAGTCCTCTGTGCTTAGGGATGGCTTCTaGCCAAAGGTGTGTCTGGGAAATCGGGGTTTGGAGTCAGTATCT | + |
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Preference number: 5 (lower is better) Translates to: EVFSSWESSVLRDGF*PKVCLGNRGLESVS Trigger: AGATACTGACTCCAAACCCCGATTTCCCAGACACACCTTTGGCCAGAAGCCATCCCTAAGCACAGAGGACTCCCAGGAAGAGAACACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | GCAGGTTTCAGAACCACTCCAGGAAAGGGTGAACTTGGTGCTCCATaGTCTTTATCCTCTGGGTCTTCCTTAGGTGGTTTGAAAGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: AGFRTTPGKGELGAP*SLSSGSSLGGLKGA Trigger: CGCCCCTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCACCAAGTTCACCCTTTCCTGGAGTGGTTCTGAAACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | CTTCAAAATCCCCCAGGACCATGCGTTAGTCTTCTCGTCAACCTGTaGCACGGATCCATCGTCATCATCTTCCTCCTCTATTCCGTCATA | + |
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Preference number: 5 (lower is better) Translates to: LQNPPGPCVSLLVNL*HGSIVIIFLLYSVI Trigger: TATGACGGAATAGAGGAGGAAGATGATGACGATGGATCCGTGCCACAGGTTGACGAGAAGACTAACGCATGGTCCTGGGGGATTTTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 90 bp | TACAGGTTTCAGGAACCCCACTTTGACCTCAGGGTCTCTAGAAACTaGGTTTGGCTGTGTTCCAAATCTTGGGCTCCCTCCAGTAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: YRFQEPHFDLRVSRN*VWLCSKSWAPSSRF Trigger: AAACCTACTGGAGGGAGCCCAAGATTTGGAACACAGCCAAACTCAGTTTCTAGAGACCCTGAGGTCAAAGTGGGGTTCCTGAAACCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 |
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| CDS TCA 90 bp | GCTGTCAGCTTGGAAGGGGCCTTAGGGAATCTGGCCGGCTCTTCTTaGTTCAGTTTGTTCAGAAAGATGTTCTTTGCAAGGTCTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: AVSLEGALGNLAGSS*FSLFRKMFFARSVF Trigger: GAAAACAGACCTTGCAAAGAACATCTTTCTGAACAAACTGAATCAAGAAGAGCCGGCCAGATTCCCTAAGGCCCCTTCCAAGCTGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | CTCAGCCACATCATCATAGACATCCTGGTCATCTTCAACAAGTCTTaGTGGGACAGCATTGAGGGAGTTCTTCTTCCGTTTCAGCGAATC | + |
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Preference number: 5 (lower is better) Translates to: LSHIIIDILVIFNKS*WDSIEGVLLPFQRI Trigger: GATTCGCTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCTATGATGATGTGGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS-3UTR CAA 90 bp | TGCGAAGGTAATCCCTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATCCAACACTCATTCCTaGACTCATCTCTGCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CEGNPSSPYNTKSFSVFASNTHS*THLCRW Trigger: CCACCTGCAGAGATGAGTCAAGGAATGAGTGTTGGA...TGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAGGGATTACCTTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS TCA 90 bp | CATAGACATCCTGGTCATCTTCAACAAGTCTTGGTGGGACAGCATTaGGGGAGTTCTTCTTCCGTTTCAGCGAATCATAGTCAATCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HRHPGHLQQVLVGQH*GSSSSVSANHSQSP Trigger: TGGAGATTGACTATGATTCGCTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 90 bp | AGCCACATCATCATAGACATCCTGGTCATCTTCAACAAGTCTTGGTaGGACAGCATTGAGGGAGTTCTTCTTCCGTTTCAGCGAATCATA | + |
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Preference number: 5 (lower is better) Translates to: SHIIIDILVIFNKSW*DSIEGVLLPFQRII Trigger: TATGATTCGCTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCTATGATGATGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 90 bp | TCCTCTTCTAGATTTCCAGTACCATCAGAGTGCATGACACCATCTTaGTTTTCGTCATTTATAGGATGTTTCAGGTCAAGGGGAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSRFPVPSECMTPS*FSSFIGCFRSRGGL Trigger: CAAACCTCCCCTTGACCTGAAACATCCTATAAATGACGAAAATCAAGATGGTGTCATGCACTCTGATGGTACTGGAAATCTAGAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS-3UTR CAA 90 bp | CTCTTCTCCCTACAACACCAAATCGTTTTCTGTCTTTGCATTTCTGAGAAACTCTTCCTGCAGAGAACTTaGGTGTCATCTGTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LFSLQHQIVFCLCISEKLFLQRT*VSSVLC Trigger: ACAAAGCACAGATGACACCAAAGTTCTCTGCAGGAA...GAGTTTCTCAGAAATGCAAAGACAGAAAACGATTTGGTGTTGTAGGGAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS CCA 72 bp | GGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTTGGGTaGAGGCGGGCCCAAGACGGACAGGGGTGGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GQVNVGWSVGLG*RRAQDGQGWQG Trigger: GCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | GGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGGGTaGCAGGGCCTTCTGCTTCGGGGTTGCAGAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: GLGWRRAQDGQG*QGLLLRGCRIL Trigger: AAGAATTCTGCAACCCCGAAGCAGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | GCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTaGGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGCAGGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AFRNLVRSTLGGLLG*GGGGPKTDRGGRAF Trigger: GAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | ATCTGGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTTaGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: IWSGQRWVVCWA*VEAGPRRTGVA Trigger: TGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | AATCTGGTCAGGTCAACGTTGGGTGGTCTGTTGGGCTaGGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: NLVRSTLGGLLG*GGGGPKTDRGG Trigger: GCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | GAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTaGGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGGGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESAFRNLVRSTLGGL*GLGGGGPKTDRGGR Trigger: CCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | TTCGGAATCTGGTCAGGTCAACGTTGGGTGGTCTGTTaGGCTTGGGTGGAGGCGGGCCCAAGACGGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: FGIWSGQRWVVC*AWVEAGPRRTG Trigger: CCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | GCAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTaGGGTGGTCTGTTGGGCTTGGGTGGAGGCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AESAFRNLVRST*GGLLGLGGGGP Trigger: GGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS GCA 72 bp | GGCGGGCCCAAGACGGACAGGGGTGGCAGGGCCTTCTaGTTCGGGGTTGCAGAATTCTTGTCTCCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GGPKTDRGGRAF*FGVAEFLSPSF Trigger: GAAAGAAGGAGACAAGAATTCTGCAACCCCGAAGCAGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | GTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTaGTCTGTTGGGCTTGGGTGGAGGCGGGCCCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VSLSESGQVNVG*SVGLGWRRAQD Trigger: GTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | CAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTaGGTGGTCTGTTGGGCTTGGGTGGAGGCGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QSQPFGIWSGQR*VVCWAWVEAGP Trigger: TGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | GCACTGTTTGCAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTaGGGTGGTCTGTTGGGCTTGGGTGGAGGCGGGCCCAAGACGGAC | + |
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Preference number: 6 (lower is better) Translates to: ALFAESAFRNLVRST*GGLLGLGGGGPKTD Trigger: GTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGACCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | TCTTTATCCTCTGGGTCTTCCTTAGGTGGTTTGAAAGGGGCGCCCTaGGACTTGGCGCCCAACTGCACTGGGGATCCTTTCTGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLSSGSSLGGLKGAP*DLAPNCTGDPFWTG Trigger: GCCTGTCCAGAAAGGATCCCCAGTGCAGTTGGGCGCCAAGTCCAAGGGCGCCCCTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | CTTGGTGCTCCATGGTCTTTATCCTCTGGGTCTTCCTTAGGTGGTTaGAAAGGGGCGCCCTTGGACTTGGCGCCCAACTGCACTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGAPWSLSSGSSLGG*KGAPLDLAPNCTGD Trigger: ATCCCCAGTGCAGTTGGGCGCCAAGTCCAAGGGCGCCCCTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | ATTGTATTCCAGAAGGCGAGCTTTGTCCTGCAACTTTaGAGGGCCTGCTGCTGGTGGCGGCCTCCTCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: IVFQKASFVLQL*RACCWWRPPLS Trigger: CGACAGAGGAGGCCGCCACCAGCAGCAGGCCCTTCAAAGTTGCAGGACAAAGCTCGCCTTCTGGAATACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS CAA 72 bp | GATTGTATTCCAGAAGGCGAGCTTTGTCCTGCAACTTaGAAGGGCCTGCTGCTGGTGGCGGCCTCCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DCIPEGELCPAT*KGLLLVAASSV Trigger: GACAGAGGAGGCCGCCACCAGCAGCAGGCCCTTCAAAGTTGCAGGACAAAGCTCGCCTTCTGGAATACAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS CAA 72 bp | CCATGGTCTTTATCCTCTGGGTCTTCCTTAGGTGGTTaGAAAGGGGCGCCCTTGGACTTGGCGCCCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: PWSLSSGSSLGG*KGAPLDLAPNC Trigger: GCAGTTGGGCGCCAAGTCCAAGGGCGCCCCTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | TGCTCCATGGTCTTTATCCTCTGGGTCTTCCTTAGGTaGTTTGAAAGGGGCGCCCTTGGACTTGGCGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: CSMVFILWVFLR*FERGALGLGAQ Trigger: TTGGGCGCCAAGTCCAAGGGCGCCCCTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | GCTCGCAGCAGGTTTCAGAACCACTCCAGGAAAGGGTaGACTTGGTGCTCCATGGTCTTTATCCTCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ARSRFQNHSRKG*TWCSMVFILWV Trigger: GACCCAGAGGATAAAGACCATGGAGCACCAAGTTCACCCTTTCCTGGAGTGGTTCTGAAACCTGCTGCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | TTGGACTTGGCGCCCAACTGCACTGGGGATCCTTTCTaGACAGGCACGTTCTTAGAAGTGTTCTCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LDLAPNCTGDPF*TGTFLEVFSSW Trigger: CCAGGAAGAGAACACTTCTAAGAACGTGCCTGTCCAGAAAGGATCCCCAGTGCAGTTGGGCGCCAAGTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | CCCCCAGGACCATGCGTTAGTCTTCTCGTCAACCTGTaGCACGGATCCATCGTCATCATCTTCCTCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: PPGPCVSLLVNL*HGSIVIIFLLY Trigger: ATAGAGGAGGAAGATGATGACGATGGATCCGTGCCACAGGTTGACGAGAAGACTAACGCATGGTCCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | GGTGTGTCTGGGAAATCGGGGTTTGGAGTCAGTATCTaGTGCCGCTGGCATGAACTTGCTCTTAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GVSGKSGFGVSI*CRWHELALSSS Trigger: GCTGGAGCTAAGAGCAAGTTCATGCCAGCGGCACAAGATACTGACTCCAAACCCCGATTTCCCAGACACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | AGACGGACAGGGGTGGCAGGGCCTTCTGCTTCGGGGTaGCAGAATTCTTGTCTCCTTCTTTCTCCTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: RRTGVAGPSASG*QNSCLLLSPDF Trigger: AAAGTCAGGAGAAAGAAGGAGACAAGAATTCTGCAACCCCGAAGCAGAAGGCCCTGCCACCCCTGTCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | TTCTTTCTTGATTGTATTCCAGAAGGCGAGCTTTGTCCTGCAACTTaGAAGGGCCTGCTGCTGGTGGCGGCCTCCTCTGTCGGGTTACTC | + |
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Preference number: 6 (lower is better) Translates to: FFLDCIPEGELCPAT*KGLLLVAASSVGLL Trigger: GAGTAACCCGACAGAGGAGGCCGCCACCAGCAGCAGGCCCTTCAAAGTTGCAGGACAAAGCTCGCCTTCTGGAATACAATCAAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS CAA 90 bp | GCAGGGAAGTTGTCGAGTAAGGTGTCTGGCTTTTGGTGGCACTGTTaGCAGAGTCAGCCTTTCGGAATCTGGTCAGGTCAACGTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: AGKLSSKVSGFWWHC*QSQPFGIWSGQRWV Trigger: CACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTGCCACCAAAAGCCAGACACCTTACTCGACAACTTCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS GCA 72 bp | GTGTCTGGGAAATCGGGGTTTGGAGTCAGTATCTTGTaGCGCTGGCATGAACTTGCTCTTAGCTCCAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: VSGKSGFGVSIL*RWHELALSSSY Trigger: GTAGCTGGAGCTAAGAGCAAGTTCATGCCAGCGGCACAAGATACTGACTCCAAACCCCGATTTCCCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS GCA 72 bp | TTTCTTCAAAGTTTTTGGAGAGACCCGGGCTCCCTCTaGTCGCAGCAGGTTTCAGAACCACTCCAGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: FLQSFWRDPGSL*SQQVSEPLQER Trigger: CCTTTCCTGGAGTGGTTCTGAAACCTGCTGCGAGCAGAGGGAGCCCGGGTCTCTCCAAAAACTTTGAAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | TTCTGGACAGGCACGTTCTTAGAAGTGTTCTCTTCCTaGGAGTCCTCTGTGCTTAGGGATGGCTTCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: FWTGTFLEVFSS*ESSVLRDGFWP Trigger: TGGCCAGAAGCCATCCCTAAGCACAGAGGACTCCCAGGAAGAGAACACTTCTAAGAACGTGCCTGTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | GTGGCAGGGAAGTTGTCGAGTAAGGTGTCTGGCTTTTaGTGGCACTGTTTGCAGAGTCAGCCTTTCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: VAGKLSSKVSGF*WHCLQSQPFGI Trigger: GATTCCGAAAGGCTGACTCTGCAAACAGTGCCACCAAAAGCCAGACACCTTACTCGACAACTTCCCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | CTGGTGGCGGCCTCCTCTGTCGGGTTACTCCCCGTGTaGAACTTCGCCATGAGGGATTTTACATCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LVAASSVGLLPV*NFAMRDFTSVF Trigger: AAAAACAGATGTAAAATCCCTCATGGCGAAGTTCAACACGGGGAGTAACCCGACAGAGGAGGCCGCCACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226412.2 |
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| CDS CAA 90 bp | CTTAGGGATGGCTTCTGGCCAAAGGTGTGTCTGGGAAATCGGGGTTaGGAGTCAGTATCTTGTGCCGCTGGCATGAACTTGCTCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LRDGFWPKVCLGNRG*ESVSCAAGMNLLLA Trigger: AGCTAAGAGCAAGTTCATGCCAGCGGCACAAGATACTGACTCCAAACCCCGATTTCCCAGACACACCTTTGGCCAGAAGCCATCCCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | CGCTGGCATGAACTTGCTCTTAGCTCCAGCTACCTTTaGGAATCCTGGCTTCAGTTCGTTTTCTGGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: RWHELALSSSYL*ESWLQFVFWDW Trigger: CCAGTCCCAGAAAACGAACTGAAGCCAGGATTCTCAAAGGTAGCTGGAGCTAAGAGCAAGTTCATGCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | CCAGGTGGCCGTAAAACCACAGGTTTGGAATCTTCTTaGGTCAAGCTGGTGGGTTTGGGGCTTACAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PGGRKTTGLESS*VKLVGLGLTGF Trigger: GAAACCTGTAAGCCCCAAACCCACCAGCTTGACCAAAGAAGATTCCAAACCTGTGGTTTTACGGCCACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | CCATATGACCCCCTTGCAGTCCTGCCCAGCCATTTTCCTTCTGGGTaGTCTGTGATGCGGATAATCTCAATGTCCTCTCCTTGTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PYDPLAVLPSHFPSG*SVMRIISMSSPCLK Trigger: CTTCAAACAAGGAGAGGACATTGAGATTATCCGCATCACAGACAACCCAGAAGGAAAATGGCTGGGCAGGACTGCAAGGGGGTCATATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS GCA 72 bp | TTCCTTCTCAGGCTTCTCCTCGTAGGTAGGTTTCGCTaGCAAGGGTGGTTTTGTGGTCCCAAATTTAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FLLRLLLVGRFR*QGWFCGPKFRH Trigger: ATGCCTAAATTTGGGACCACAAAACCACCCTTGGCAGCGAAACCTACCTACGAGGAGAAGCCTGAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS CCA 72 bp | CAGGTGGCCGTAAAACCACAGGTTTGGAATCTTCTTTaGTCAAGCTGGTGGGTTTGGGGCTTACAGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QVAVKPQVWNLL*SSWWVWGLQVS Trigger: TGAAACCTGTAAGCCCCAAACCCACCAGCTTGACCAAAGAAGATTCCAAACCTGTGGTTTTACGGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | AGAACCACTCCAGGAAAGGGTGAACTTGGTGCTCCATaGTCTTTATCCTCTGGGTCTTCCTTAGGTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: RTTPGKGELGAP*SLSSGSSLGGL Trigger: CAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCACCAAGTTCACCCTTTCCTGGAGTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | TTAGGCATGCTGCTGGGTCCTGCGGGCGGGCTGGCATTTCCTTGGTaGTCAAATAAATTCTTTCTTGATTGTATTCCAGAAGGCGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LGMLLGPAGGLAFPW*SNKFFLDCIPEGEL Trigger: AAGCTCGCCTTCTGGAATACAATCAAGAAAGAATTTATTTGACAACCAAGGAAATGCCAGCCCGCCCGCAGGACCCAGCAGCATGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090461.12 ENSMUST00000226412.2 ENSMUST00000227175.2 |
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| CDS TCA 72 bp | TTGACATCGCAGCAGGCTTTTGCATGGTGGATGACTTaGATGGGGCCCGTGAGCTTGAATTTCTTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LTSQQAFAWWMT*MGPVSLNFFFS Trigger: ACTGAAGAAGAAATTCAAGCTCACGGGCCCCATTCAAGTCATCCACCATGCAAAAGCCTGCTGCGATGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CCA 72 bp | AAACCACAGGTTTGGAATCTTCTTTGGTCAAGCTGGTaGGTTTGGGGCTTACAGGTTTCAGGAACCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: KPQVWNLLWSSW*VWGLQVSGTPL Trigger: AAGTGGGGTTCCTGAAACCTGTAAGCCCCAAACCCACCAGCTTGACCAAAGAAGATTCCAAACCTGTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | TCTGGGTTGTCTGTGATGCGGATAATCTCAATGTCCTCTCCTTGTTaGAAGCTCAGCTCATTCTTTCCTCCTTTGACATCGCAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGLSVMRIISMSSPC*KLSSFFPPLTSQQA Trigger: AGCCTGCTGCGATGTCAAAGGAGGAAAGAATGAGCTGAGCTTCAAACAAGGAGAGGACATTGAGATTATCCGCATCACAGACAACCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 90 bp | TCCTTCTGGGTTGTCTGTGATGCGGATAATCTCAATGTCCTCTCCTaGTTTGAAGCTCAGCTCATTCTTTCCTCCTTTGACATCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SFWVVCDADNLNVLS*FEAQLILSSFDIAA Trigger: TGCTGCGATGTCAAAGGAGGAAAGAATGAGCTGAGCTTCAAACAAGGAGAGGACATTGAGATTATCCGCATCACAGACAACCCAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | CCTGGTCATCTTCAACAAGTCTTGGTGGGACAGCATTaGGGGAGTTCTTCTTCCGTTTCAGCGAATCATAGT | + |
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Preference number: 6 (lower is better) Translates to: PGHLQQVLVGQH*GSSSSVSANHS Trigger: ACTATGATTCGCTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | TCTCCTTGTTTGAAGCTCAGCTCATTCTTTCCTCCTTaGACATCGCAGCAGGCTTTTGCATGGTGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: SPCLKLSSFFPP*TSQQAFAWWMT Trigger: AGTCATCCACCATGCAAAAGCCTGCTGCGATGTCAAAGGAGGAAAGAATGAGCTGAGCTTCAAACAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | CCTGGCGTCTTTAAGTCAGACTCTTGGTTCAAATTGTaGAGTTTATTCCCAGGTGGCCGTAAAACCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: PGVFKSDSWFKL*SLFPGGRKTTG Trigger: ACCTGTGGTTTTACGGCCACCTGGGAATAAACTTCACAATTTGAACCAAGAGTCTGACTTAAAGACGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | AACTTTGGTGTCATCTGTGCTTTGTATAACTTCGAGTaGCTCCCCAGGTTTTATCTGCAGATCTCTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NFGVICALYNFE*LPRFYLQISRS Trigger: GGAGCGAGAGATCTGCAGATAAAACCTGGGGAGTCACTCGAAGTTATACAAAGCACAGATGACACCAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090461.12 ENSMUST00000163073.2 |
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| CDS CCA 72 bp | ATCATAGACATCCTGGTCATCTTCAACAAGTCTTGGTaGGACAGCATTGAGGGAGTTCTTCTTCCGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IIDILVIFNKSW*DSIEGVLLPFQ Trigger: CTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCTATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS CAA 72 bp | ATCCACATCATCGTAAACTTCTTCTCCCACATCCAGTaGCTTATGCTGAGAAGGGAGACCATCGTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: IHIIVNFFSHIQ*LMLRRETIVII Trigger: GATGATGACGATGGTCTCCCTTCTCAGCATAAGCAACTGGATGTGGGAGAAGAAGTTTACGATGATGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163073.2 |
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| CDS CCA 72 bp | ATCATCATAGACATCCTGGTCATCTTCAACAAGTCTTaGTGGGACAGCATTGAGGGAGTTCTTCTTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: IIIDILVIFNKS*WDSIEGVLLPF Trigger: AAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCTATGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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| CDS TCA 72 bp | AGATTTCCAGTACCATCAGAGTGCATGACACCATCTTaGTTTTCGTCATTTATAGGATGTTTCAGGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RFPVPSECMTPS*FSSFIGCFRSR Trigger: CCTTGACCTGAAACATCCTATAAATGACGAAAATCAAGATGGTGTCATGCACTCTGATGGTACTGGAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090461.12 |
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