Pregenerated sensors for FXYD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036578Ensembl transcript IDs: ENSMUST00000073892.6, ENSMUST00000206341.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CGGCTGATTGGGGGCACACTCCCTGGCGCCAGGCTGGGTCCCCACCGCCTTCTCCTGGTTCCTGCACTCTaGCCAGGGACAGCAGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RLIGGTLPGARLGPHRLLLVPAL*PGTAVE Trigger: TTCCACTGCTGTCCCTGGCCAGAGTGCAGGAACCAG...GAGAAGGCGGTGGGGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATCAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTGGGAGAGCGGGGTGCATTaGCTCCGGCCTTGGGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRPGDAGGRDTRIPGDWESGVH*LRPWGG Trigger: CCCACCCCAAGGCCGGAGCCAATGCACCCCGCTCTC...CCAGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTGGGGATGGCAGGAGCTGGAGGCCTaGGTCTCTGGGTCTAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: RPGDAGGRDTRIPGDWGWQELEA*VSGSRV Trigger: TACCCTAGACCCAGAGACTCAGGCCTCCAGCTCCTG...CCATCCCCAGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTCTGGTTCCTGCACTCTaGCCAGGGACAGCAGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GEGDQEMQEGGTLGSQGTLVPAL*PGTAVE Trigger: TTCCACTGCTGTCCCTGGCCAGAGTGCAGGAACCAG...AGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTCTGGCGGCTGATTaGGGGCACACTCCCTGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: NECTFIKLKMWTLRGSWEGLAAD*GHTPWR Trigger: GCGCCAGGGAGTGTGCCCCCAATCAGCCGCCAGACC...TTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTCCCCACCGCCTTCTCTaGGTCCTCTGGTTCCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: ECTFIKLKMWTLRGSWEGPHRLL*VLWFLH Trigger: GTGCAGGAACCAGAGGACCCAGAGAAGGCGGTGGGG...ACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTCTGGGGATGGACTCCTaGATCCCAGGAGCTGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ECTFIKLKMWTLRGSWEGLGMDS*IPGAGG Trigger: GCCTCCAGCTCCTGGGATCCAGGAGTCCATCCCCAG...ACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACGAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGTTGTTGCCAAGGCCTaGGGAGGGAGAGCGGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KNECTFIKLKMWTLRGSWVVAKA*GGRAGC Trigger: GCACCCCGCTCTCCCTCCCCAGGCCTTGGCAACAAC...CCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTCGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAACGAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGGGTCCTCTGGTTCCTaGACTCTGGCCAGGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: KNECTFIKLKMWTLRGSWGSSGS*TLARDS Trigger: GCTGTCCCTGGCCAGAGTGCAGGAACCAGAGGACCC...CCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTCGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTCTTCTCTGGGTCCTCTaGTTCCTGCACTCTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ECTFIKLKMWTLRGSWEGLLWVL*FLHSGQ Trigger: CTGGCCAGAGTGCAGGAACCAGAGGACCCAGAGAAG...ACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAACTTCTCTGGGTCCTCTaGTTCCTGCACTCTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NECTFIKLKMWTLRGSWELLWVL*FLHSGQ Trigger: CTGGCCAGAGTGCAGGAACCAGAGGACCCAGAGAAG...TTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR CCA 72 bp | GATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTaGGGATGGACTCCTGGATCCCAGGAGCTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DAGGRDTRIPGD*GWTPGSQELEA Trigger: GGCCTCCAGCTCCTGGGATCCAGGAGTCCATCCCCAGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTCAAATAGGATCGTTGTaGCCAAGGCCTGGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GEGDQEMQEGGTLGSQGTQIGSL*PRPGEG Trigger: TCCCTCCCCAGGCCTTGGCAACAACGATCCTATTTG...AGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTGGAGAGCGGGGTGCATaGGCTCCGGCCTTGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ECTFIKLKMWTLRGSWEGGERGA*APALGW Trigger: CCACCCCAAGGCCGGAGCCAATGCACCCCGCTCTCC...ACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| 3UTR CCA 72 bp | TTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTaGGAAGGTCCTGGAGAAGGAGACCAGGAGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FIKLKMWTLRGS*EGPGEGDQEMQ Trigger: CTGCATCTCCTGGTCTCCTTCTCCAGGACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCATTGGCTCCGGCCTTGGGGTGGGTCTGGCGGCTGATTGGGGGCACACTCGCCACCTCCAGGGGCTaGGGAGGGCAGTTCCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GALAPALGWVWRLIGGTLATSRG*GGQFRL Trigger: AAGTCGGAACTGCCCTCCTCAGCCCCTGGAGGTGGC...GAGTGTGCCCCCAATCAGCCGCCAGACCCACCCCAAGGCCGGAGCCAATGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTGATTGGGGGCACACTCCCTGGCGCCAGGCTGGGTCCCCACCGCCTTCTCTTGGGCTCTCAGACCTaGAATCCGCCTTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RLIGGTLPGARLGPHRLLLGSQT*NPPSCT Trigger: AGTGCAGGAAGGCGGATTCCAGGTCTGAGAGCCCAA...GAGAAGGCGGTGGGGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATCAGCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073892.6 |
||
| CDS-3UTR GCA 90 bp | GTCTGGCGGCTGATTGGGGGCACACTCCCTGGCGCCAGGCTGGGTCCCCACCGCCCGACTTACAGGATTTaGATGTTGGGCTGGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: VWRLIGGTLPGARLGPHRPTYRI*MLGWNP Trigger: CGGATTCCAGCCCAACATGCAAATCCTGTAAGTCGG...GCGGTGGGGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATCAGCCGCCAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206341.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCATTGGCTCCGGCCTTGGGGTGGGTCTGGCGGCTGATTGGGGGCACACTCCTTCAGGAACGTTTGTaGGGCTCTGGGTTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GALAPALGWVWRLIGGTLLQERL*GSGLGW Trigger: CCACCCCAACCCAGAGCCCCACAAACGTTCCTGAAG...GAGTGTGCCCCCAATCAGCCGCCAGACCCACCCCAAGGCCGGAGCCAATGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTGCCACCTCCAGGGGCTaGGGAGGGCAGTTCCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEGDQEMQEGGTLGSQGTATSRG*GGQFRL Trigger: AAGTCGGAACTGCCCTCCTCAGCCCCTGGAGGTGGC...AGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR GCA 90 bp | AGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTGGGGATGGCCGACTTACAGGATTTaGATGTTGGGCTCTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RPGDAGGRDTRIPGDWGWPTYRI*MLGSQT Trigger: GGTCTGAGAGCCCAACATGCAAATCCTGTAAGTCGG...CCATCCCCAGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073892.6 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTGGTGGAATCCGCCTTCCTaGACTTCACCTTCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRPGDAGGRDTRIPGDWWNPPS*TSPSCS Trigger: TGAGCAAGAAGGTGAAGTGCAGGAAGGCGGATTCCA...CCAGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAAGGTCTTCAGGAACGTTTGTaGGGCTCTGGGTTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECTFIKLKMWTLRGSWEGLQERL*GSGLGW Trigger: CCACCCCAACCCAGAGCCCCACAAACGTTCCTGAAG...ACCTTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR GCA 90 bp | AACGAATGCACATTTATTAAGCTCAAGATGTGGACCCTGAGGGGAAGCTGGGAATGGAATCCGCCTTCCTaGACTTCACCTTCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NECTFIKLKMWTLRGSWEWNPPS*TSPSCS Trigger: TGAGCAAGAAGGTGAAGTGCAGGAAGGCGGATTCCA...TTCCCAGCTTCCCCTCAGGGTCCACATCTTGAGCTTAATAAATGTGCATTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073892.6 ENSMUST00000206341.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGTCTGGCGGCTGATTGGGGGCACACTCCCTGGCGCCAGGCTGGGTCCTACAGGATTTGCATGTaGGGCTGGAATCCGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVGLAADWGHTPWRQAGSYRICM*GWNPPS Trigger: GGAAGGCGGATTCCAGCCCAACATGCAAATCCTGTA...GGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATCAGCCGCCAGACCCACCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206341.2 |
||
| CDS-3UTR CAA 90 bp | GATTGGGGGCACACTCCCTGGCGCCAGGCTGGGTCCCCACCGCCTTCTCTGGGTTCCGACTTACAGGATTaGCATGTTGGGCTCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DWGHTPWRQAGSPPPSLGSDLQD*HVGLSD Trigger: GTCTGAGAGCCCAACATGCAAATCCTGTAAGTCGGA...ACCCAGAGAAGGCGGTGGGGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073892.6 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGGAGACCAGGAGATGCAGGAGGGAGGGACACTAGGATCCCAGGGGACTTCCGACTTACAGGATTaGCATGTTGGGCTGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GEGDQEMQEGGTLGSQGTSDLQD*HVGLES Trigger: GGATTCCAGCCCAACATGCAAATCCTGTAAGTCGGA...AGTCCCCTGGGATCCTAGTGTCCCTCCCTCCTGCATCTCCTGGTCTCCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206341.2 |
||
| CDS GCA 72 bp | CAGGGGCTGAGGAGGGCAGTTCCGACTTACAGGATTTaGATGTTGGGCTCTCAGACCTGGAATCCGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGLRRAVPTYRI*MLGSQTWNPPS Trigger: GGAAGGCGGATTCCAGGTCTGAGAGCCCAACATGCAAATCCTGTAAGTCGGAACTGCCCTCCTCAGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073892.6 |
||
| CDS CAA 72 bp | CCAGGGGCTGAGGAGGGCAGTTCCGACTTACAGGATTaGCATGTTGGGCTCTCAGACCTGGAATCCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGAEEGSSDLQD*HVGLSDLESAF Trigger: GAAGGCGGATTCCAGGTCTGAGAGCCCAACATGCAAATCCTGTAAGTCGGAACTGCCCTCCTCAGCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073892.6 |
||
| CDS GCA 72 bp | CAGGGGCTGAGGAGGGCAGTTCCGACTTACAGGATTTaGATGTTGGGCTGGAATCCGCCTTCCTGCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QGLRRAVPTYRI*MLGWNPPSCTS Trigger: TGAAGTGCAGGAAGGCGGATTCCAGCCCAACATGCAAATCCTGTAAGTCGGAACTGCCCTCCTCAGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206341.2 |
||