RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FXYD5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009687

Ensembl transcript IDs: ENSMUST00000009831.14, ENSMUST00000159753.2, ENSMUST00000159924.8, ENSMUST00000160689.8, ENSMUST00000161684.8, ENSMUST00000161805.8, ENSMUST00000162087.8, ENSMUST00000162116.8, ENSMUST00000162250.8, ENSMUST00000162733.8, ENSMUST00000202395.4

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAACAGCGCCCCCTGCTGCAACCAGAACAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCGAGAATCATCCCTGGGGTGGTTTGT +
Preference number: 1 (lower is better)
Translates to: RNSAPCCNQNNRPAG*NQQARPRIIPGVVC
Trigger: ACAAACCACCCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTGGTTGCAGCAGGGGGCGCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 90 bp CACGTGACCGAGCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTaGACTCTAGGAACAGCGCCCCCTGCTGCAACCAGAACAACCGCC +
Preference number: 1 (lower is better)
Translates to: HVTEPRKKRTTEEET*TLGTAPPAATRTTA
Trigger: GGCGGTTGTTCTGGTTGCAGCAGGGGGCGCTGTTCCTAGAGTGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGCTCGGTCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 90 bp CTCTGTCCTGTGTGTCTCTGTATCGCTCATCGGGGCACTACCACGTaGCCGAGCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTGCA +
Preference number: 1 (lower is better)
Translates to: LCPVCLCIAHRGTTT*PSPGRKGQQRKRRA
Trigger: TGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGCTCGGTCACGTGGTAGTGCCCCGATGAGCGATACAGAGACACACAGGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 90 bp TCAGAGTCAAAGGACTCTGTCTTCTTTGCTGAACCTGGCACACACTaGTGCAGCTGGGCTGGCTCCTTTCTCTCTTCAGCATGGGTGGGT +
Preference number: 1 (lower is better)
Translates to: SESKDSVFFAEPGTH*CSWAGSFLSSAWVG
Trigger: ACCCACCCATGCTGAAGAGAGAAAGGAGCCAGCCCAGCTGCATCAGTGTGTGCCAGGTTCAGCAAAGAAGACAGAGTCCTTTGACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 90 bp ATCAGGGTGCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATTaGGACAACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAGT +
Preference number: 1 (lower is better)
Translates to: IRVLARTHLWRFRQN*DNCLHFPPGRKRTS
Trigger: ACTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 90 bp TCCCAGCTCCAGGGTATCCAACTCTCTTCCATCTGTCATGGCCTCTaGACTCACACACACATACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: SQLQGIQLSSICHGL*THTHIHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGAGTGCAGAGGCCATGACAGATGGAAGAGAGTTGGATACCCTGGAGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 90 bp CCTCCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTTGGGCTaGACTGTATTTCAGAGTCAAAGGACTCTGTCTTCTTTGCTGAAC +
Preference number: 1 (lower is better)
Translates to: PPPPEVDVECFPRLG*TVFQSQRTLSSLLN
Trigger: GTTCAGCAAAGAAGACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 90 bp GAAGTTATAGCTCTGCTTGCCCATCAGTTAGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGCCAGTCTCCTCCCTTCTCTCTTACT +
Preference number: 1 (lower is better)
Translates to: EVIALLAHQLALGRV*CHRKTSQSPPFSLT
Trigger: AGTAAGAGAGAAGGGAGGAGACTGGCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGCTAACTGATGGGCAAGCAGAGCTATAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 90 bp CTCACATCCAGCTCCTACCATCTATCTAAGGAGACTCACATCGTCTaGAACTCCCAGCTCCAGGGTATCCAACTCTCTTCCATCTGTCAT +
Preference number: 1 (lower is better)
Translates to: LTSSSYHLSKETHIV*NSQLQGIQLSSICH
Trigger: ATGACAGATGGAAGAGAGTTGGATACCCTGGAGCTGGGAGTTTCAGACGATGTGAGTCTCCTTAGATAGATGGTAGGAGCTGGATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 90 bp ACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAGTTTGCCCATaGGCTGGAAACAGTACTAATTATCACATAGTCACTGGAGACCGG +
Preference number: 1 (lower is better)
Translates to: TAYTSHLEEKEPVCP*AGNSTNYHIVTGDR
Trigger: CCGGTCTCCAGTGACTATGTGATAATTAGTACTGTTTCCAGCTCATGGGCAAACTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 90 bp ATGAATGAAGTCCTGTTTTCTCTTCTCACAAATGAAGCCGACCCTTaGCTTGTAAAGAAGCATAACGTAGTATCCACTAGCAGTCATCTG +
Preference number: 1 (lower is better)
Translates to: MNEVLFSLLTNEADP*LVKKHNVVSTSSHL
Trigger: CAGATGACTGCTAGTGGATACTACGTTATGCTTCTTTACAAGCCAAGGGTCGGCTTCATTTGTGAGAAGAGAAAACAGGACTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: AVPRETSLPRVGRPLALSRLQLG*PSGCWP
Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: AVPRETSLPRVGRPLALSGGRGW*VGVVWR
Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp GCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTGCACTCTAGGAACAGCGCCAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCG +
Preference number: 2 (lower is better)
Translates to: AQEEKDNRGRDVHSRNSANRPAG*NQQARP
Trigger: CGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTT...GGCGCTGTTCCTAGAGTGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGRLQLG*PSGCWP
Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGFGGSS*GAHQGA
Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWRLQLG*PSGCWP
Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVRLQLG*PSGCWP
Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGRLQLG*PSGCWP
Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPFGGSS*GAHQGA
Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGFGGSS*GAHQGA
Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR CAA 90 bp CATCAGGGTGCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATaGAGACAACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAG +
Preference number: 2 (lower is better)
Translates to: HQGAGPHSPVAIQAK*RQLPTLPTWKKKNQ
Trigger: CTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGGGRGW*VGVVWR
Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNGGRGW*VGVVWR
Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: GPGLESIGDGVEFKKARGALGRV*CHRKTS
Trigger: GCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGC...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNFGGSS*GAHQGA
Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGGGRGW*VGVVWR
Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWGGRGW*VGVVWR
Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWFGGSS*GAHQGA
Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR CAA 90 bp ACACATCCTCCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTaGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTGTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: THPPPPEVDVECFPR*GCTVFQSQRTLSSL
Trigger: CAAAGAAGACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGGAGGATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATCCCAGGCTGAGCCTCTaGATTCAGGTCCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNPRLSL*IQVLKQ
Trigger: TTGCTTGAGGACCTGAATTCAGAGGCTCAGCCTGGG...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGAGTTTGCACAGCTTTaGCCAGGGGGTTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: THTHRFKAIFGRHAPLSQEFAQL*PGGFKT
Trigger: GGTCTTGAAACCCCCTGGGCAAAGCTGTGCAAACTC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATACTGAGATGAACAAATaGAGGGCTGTGGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNTEMNK*RAVVGQ
Trigger: CTGCCCCACCACAGCCCTGCATTTGTTCATCTCAGT...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAAACAAAACACTCTGTAGGCTCTTaGGGTAGAGGGAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: HTDSRPSLVDMLLCLKTKHSVGS*GRGRRQ
Trigger: CTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTG...TTTTGTTTTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CTCCCAGTGAAGGGGGACAGCAAGATGGCTCAACAAGTAAAGGTGTTTGCTGCTTTTCTCTCTTCAGCATaGGTGGGTGTCACCCAGATA +
Preference number: 2 (lower is better)
Translates to: LPVKGDSKMAQQVKVFAAFLSSA*VGVTQI
Trigger: TATCTGGGTGACACCCACCCATGCTGAAGAGAGAAA...AGCAGCAAACACCTTTACTTGTTGAGCCATCTTGCTGTCCCCCTTCACTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATGAAGAGGTGGTTCAGTaGTTACTCACATCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNEEVVQ*LLTSSS
Trigger: GGAGCTGGATGTGAGTAACCACTGAACCACCTCTTC...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CCA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATCTGTCTGTGTCTCCCTaGCTTTTCCCACTGTTAGTG +
Preference number: 2 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNLSVSP*LFPLLV
Trigger: CACTAACAGTGGGAAAAGCCAGGGAGACACAGACAG...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR GCA 90 bp GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCCTCAAGCAAGCACTTTaGCCACCAATACCTCCTAAA +
Preference number: 2 (lower is better)
Translates to: GPGLESIGDGVEFKKARGLKQAL*PPIPPK
Trigger: TTTAGGAGGTATTGGTGGGCAAAGTGCTTGCTTGAG...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR TCA 90 bp GGCACACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGGATTGTGAGTTTCCTGTCTTAAAAGGATaGATGAAGTCCTGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: GTPITSSLRRLKQEDCEFPVLKG*MKSCFL
Trigger: GAGAAAACAGGACTTCATTCATCCTTTTAAGACAGG...AAACTCACAATCCTCCTGCTTCAGCCTCCTGAGGCTTGAGGTTATAGGTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CAA 90 bp CCTAAACCCATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATaGATTCCAGTCCGGTATTTGGTCACAATGAGAACAGCAACCCGC +
Preference number: 2 (lower is better)
Translates to: PKPMDLFLSYKRFQK*IPVRYLVTMRTATR
Trigger: GCGGGTTGCTGTTCTCATTGTGACCAAATACCGGACTGGAATCAATTTCTGGAAGCGTTTATAGCTTAAGAAGAGATCCATGGGTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 72 bp GCCCCCTGCTGCAACCAGAACAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCGAGAATCATCCCTGGG +
Preference number: 3 (lower is better)
Translates to: APCCNQNNRPAG*NQQARPRIIPG
Trigger: CCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTGGTTGCAGCAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 72 bp GTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTaGCCCGCACTCACCTGTGGCGATTCAGGCAAAATT +
Preference number: 3 (lower is better)
Translates to: VWRLQLGCPSGC*PALTCGDSGKI
Trigger: AATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 72 bp GCTCTGCTTGCCCATCAGTTAGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGCCAGTCTCCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ALLAHQLALGRV*CHRKTSQSPPF
Trigger: GAAGGGAGGAGACTGGCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGCTAACTGATGGGCAAGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 72 bp GCAACCAGCAGGCTAGGCCGAGAATCATCCCTGGGGTaGTTTGTAGGGGTGCTGAGTTTGCACAGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: ATSRLGRESSLG*FVGVLSLHSFA
Trigger: GGCAAAGCTGTGCAAACTCAGCACCCCTACAAACCACCCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 72 bp TGGGTGGGTGTCACCCAGATACCCAGGCTGAGCCTCTaGATTCAGGTCCTCAAGCAAGCACTTTGCCCACCA +
Preference number: 3 (lower is better)
Translates to: WVGVTQIPRLSL*IQVLKQALCPP
Trigger: TGGTGGGCAAAGTGCTTGCTTGAGGACCTGAATTCAGAGGCTCAGCCTGGGTATCTGGGTGACACCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 72 bp TCAGGTCCAGAGGGCTGTGGTTCGGTTGTGCTTGCCTaGCATGTACAATGTGATGGGGTTGACTCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: SGPEGCGSVVLA*HVQCDGVDSLC
Trigger: GCACAGGGAGTCAACCCCATCACATTGTACATGCCAGGCAAGCACAACCGAACCACAGCCCTCTGGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGVSWCS*EAPAGV
Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLVSWCS*EAPAGV
Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGVSWCS*EAPAGV
Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp CTCCCAGTGAAGGGGGACAGCAAGATGGCTCAACAAGTAAAGGTGTTTGCTGCTGAGACTGCTCAGTGGTaGCTCTTCAGAAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: LPVKGDSKMAQQVKVFAAETAQW*LFRRSW
Trigger: CCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTC...AGCAGCAAACACCTTTACTTGTTGAGCCATCTTGCTGTCCCCCTTCACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 72 bp AAGGACTCTGTCTTCTTTGCTGAACCTGGCACACACTaGTGCAGCTGGGCTGGCTCCTTTCTCTCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: KDSVFFAEPGTH*CSWAGSFLSSA
Trigger: TGCTGAAGAGAGAAAGGAGCCAGCCCAGCTGCATCAGTGTGTGCCAGGTTCAGCAAAGAAGACAGAGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGVSWCS*EAPAGV
Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGVSWCS*EAPAGV
Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp TGGAGTGTTTTCCTCGGTTGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTGTCCTATAACTAAGCACTaGGGAGGTAGAGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: WSVFLGWAALYFRVKGLCPITKH*GGRGRR
Trigger: CCTCCTGCCTCTACCTCCCAAGTGCTTAGTTATAGG...ACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 72 bp AGCTCCTACCATCTATCTAAGGAGACTCACATCGTCTaGAACTCCCAGCTCCAGGGTATCCAACTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SSYHLSKETHIV*NSQLQGIQLSS
Trigger: GGAAGAGAGTTGGATACCCTGGAGCTGGGAGTTTCAGACGATGTGAGTCTCCTTAGATAGATGGTAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR GCA 72 bp CAGGGTATCCAACTCTCTTCCATCTGTCATGGCCTCTaGACTCACACACACATACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: QGIQLSSICHGL*THTHIHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTATGTGTGTGTGAGTGCAGAGGCCATGACAGATGGAAGAGAGTTGGATACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR-3UTR CAA 90 bp CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATTACAATGTGATGGGGTaGACTCCCTGTGCTGCATTA +
Preference number: 3 (lower is better)
Translates to: QGLKRLLSGCSSEGPGFNYNVMG*TPCAAL
Trigger: TAATGCAGCACAGGGAGTCAACCCCATCACATTGTA...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 72 bp CAGAAGTTCAAGGTTAAGGTGGAAGAGGTGGTTCAGTaGTTACTCACATCCAGCTCCTACCATCTATCTAAG +
Preference number: 3 (lower is better)
Translates to: QKFKVKVEEVVQ*LLTSSSYHLSK
Trigger: CTTAGATAGATGGTAGGAGCTGGATGTGAGTAACCACTGAACCACCTCTTCCACCTTAACCTTGAACTTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CCA 72 bp CACACACACACACACACACAGATTCAAGGCCATCTTTaGTCGACATGCTCCTCTGTCTCAAAACAAAATAAA +
Preference number: 3 (lower is better)
Translates to: HTHTHTQIQGHL*STCSSVSKQNK
Trigger: TTTATTTTGTTTTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR TCA 72 bp ACTTCCCACCTGGAAGAAAAAGAACCAGTTTGCCCATaGGCTGGAAACAGTACTAATTATCACATAGTCACT +
Preference number: 3 (lower is better)
Translates to: TSHLEEKEPVCP*AGNSTNYHIVT
Trigger: AGTGACTATGTGATAATTAGTACTGTTTCCAGCTCATGGGCAAACTGGTTCTTTTTCTTCCAGGTGGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVLVSAL*WAESGR
Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPALVSAL*WAESGR
Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPAVSALC*AESGRQ
Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPACWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVGGLDS*AGLIWI
Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCTGTCTGGCTTCCTGTaGCTTCTGCTTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVLSGFL*LLLLWS
Trigger: GGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000009831.14
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCACTGTCTGGCTTCCTGTaGCTTCTGCTTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPALSGFL*LLLLWS
Trigger: GGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAG...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009831.14
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GCTGATCAGCTTGGCACACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGCCCCCAGCCCCTTCTTaGCCTTTCTGCCCATGCCCG +
Preference number: 4 (lower is better)
Translates to: ADQLGTPITSSLRRLKQEPPAPS*PFCPCP
Trigger: CGGGCATGGGCAGAAAGGGCAAGAAGGGGCTGGGGG...CTCCTGCTTCAGCCTCCTGAGGCTTGAGGTTATAGGTGTGCCAAGCTGATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: AVPRETSLPRVGRPLALSVSALC*AESGRQ
Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AVPRETSLPRVGRPLALSCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGCTTCCTGTGGCTTCTaGTTCTCTGGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: AVPRETSLPRVGRPLALSASCGF*FSGPDE
Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009831.14
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVTLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPATLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVPRETSLPRVGRPLALSVWAAV*LPVASS
Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
CDS-3UTR GCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGVSALC*AESGRQ
Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLLVSAL*WAESGR
Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
3UTR CAA 72 bp CCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTaGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PPPEVDVECFPR*GCTVFQSQRTL
Trigger: CAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CAA 72 bp GCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATaGAGACAACTGCCTACACTTCCCACCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AGPHSPVAIQAK*RQLPTLPTWKK
Trigger: TTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGLVSAL*WAESGR
Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AVPRETSLPRVGRPLALSTLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGGLGLG*CLASCG
Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGAGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: WKRDHVDLSEQPQQCLGRGGLDS*AGLIWI
Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: THTHTHTDSRPSLVDMLLGGLDS*AGLIWI
Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...GAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGVWAAV*LPVASA
Trigger: AGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009831.14
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLVWAAV*LPVASS
Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
CDS-3UTR GCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGLVSAL*WAESGR
Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WKRDHVDLSEQPQQCLGRQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
CDS-3UTR GCA 90 bp GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPGLESIGDGVEFKKARGQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVVSALC*AESGRQ
Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWVSALC*AESGRQ
Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWCWVSV*AAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGVWAAV*LPVASS
Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
CDS-3UTR GCA 90 bp ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGCTTCCTGTGGCTTCTaGTTCTCTGGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: THTHRFKAIFGRHAPLSQASCGF*FSGPDE
Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGGGLDS*AGLIWI
Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWGGLDS*AGLIWI
Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: THTHRFKAIFGRHAPLSQAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTACAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR GCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGQGYLS*CLYVAL
Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGVWAAV*LPVASS
Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
CDS-3UTR GCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVAIFVS*WVSVWA
Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGTLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVTLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWTLDSR*PFLSVA
Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTACTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CCA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGLIRIQ*MFNVGW
Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
3UTR CAA 72 bp TATAACTGCAGACCCATGGAATCCAATGCCCTCGTCTaGTGTGCAGACATACATGCAGATAAAACACCCATA +
Preference number: 4 (lower is better)
Translates to: YNCRPMESNALV*CADIHADKTPI
Trigger: TATGGGTGTTTTATCTGCATGTATGTCTGCACACAAGACGAGGGCATTGGATTCCATGGGTCTGCAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
3UTR CAA 72 bp ATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATaGATTCCAGTCCGGTATTTGGTCACAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: MDLFLSYKRFQK*IPVRYLVTMRT
Trigger: TGTTCTCATTGTGACCAAATACCGGACTGGAATCAATTTCTGGAAGCGTTTATAGCTTAAGAAGAGATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPALLGLG*GCCLAS
Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVWMWAF*VSALCW
Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GRRQGVVSWCSLEAPAGVSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPAAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: VGVVWRLQLGCPSGCWPAGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: AVPRETSLPRVGRPLALSLLGLG*GCCLAS
Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGCCCCCAGCCCCTTCTaGCCCTTTCTGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLAPSPF*PFLPMP
Trigger: GGGCATGGGCAGAAAGGGCAAGAAGGGGCTGGGGGC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp CAGAACAACCGCCCAGCTGGATGCAACCAGCAGGCTAGGCCGAGAATCATCCCTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: QNNRPAGCNQQARPRIIPGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...AGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AVPRETSLPRVGRPLALSSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: AVPRETSLPRVGRPLALSAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: AVPRETSLPRVGRPLALSGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS CCA 90 bp GGCTTCTGCTTCTCTGGTCCAGATGAGAGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATCTGGGACATTGTCACGAGTAGTCGC +
Preference number: 5 (lower is better)
Translates to: GFCFSGPDERGGLDS*AGLIWIWDIVTSSR
Trigger: GCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTGGACCAGAGAAGCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000160689.8
ENSMUST00000162733.8
CDS CCA 90 bp GTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTGCTTCTCTGGTCCAGATGAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: VAIFVSCWVSVWAAV*LPVASASLVQMRGV
Trigger: CACCCCTCTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000160689.8
ENSMUST00000162733.8
CDS CCA 90 bp GTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCTCTGGTCCAGATGAGAGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VAIFVSCWVSVWAAV*LPVASSLVQMRGVV
Trigger: GACCACCCCTCTCATCTGGACCAGAGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000202395.4
CDS CCA 90 bp CCTGGATCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTGGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PGSDTGFEVAIFVSC*VSVWAAVWLPVASA
Trigger: AGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGATCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000160689.8
ENSMUST00000162733.8
CDS CCA 90 bp TGTGGCTTCTTCTCTGGTCCAGATGAGAGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATCTGGGACATTGTCACGAGTAGTCGC +
Preference number: 5 (lower is better)
Translates to: CGFFSGPDERGGLDS*AGLIWIWDIVTSSR
Trigger: GCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTGGACCAGAGAAGAAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000202395.4
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLLLGLG*GCCLAS
Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: AVPRETSLPRVGRPLALSYLSCC*YVALDL
Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS GCA 90 bp ATTCGAGGTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTGCTTCTCTGGTCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: IRGGHFCQLLGLGLG*CLASCGFCFSGPDE
Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000160689.8
ENSMUST00000162733.8
CDS CCA 90 bp CCTGGATCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PGSDTGFEVAIFVSC*VSVWAAVWLPVASS
Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000202395.4
CDS-3UTR CAA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLWMWAF*VSALCW
Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: RDHVDLSEQPQQCLGRPLGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGWMWAF*VSALCW
Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVLLGLG*GCCLAS
Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: FFHVDHSVGSWGRGRRQGYLSCC*YVALDL
Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGAGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: WKRDHVDLSEQPQQCLGRAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
CDS-3UTR CAA 90 bp AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: KRDHVDLSEQPQQCLGRPAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: PSSGLFLSGFFHVDHSVGGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: THTHTHTDSRPSLVDMLLGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGWMWAF*VSALCW
Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GLFLSGFFHVDHSVGSWGSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGWMWAF*VSALCW
Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGGHFCQ*LGLGLG
Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVSRWPF*SVAGSR
Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWAGVPF*LLVCGP
Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWGGMKF*DGLRGS
Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS CCA 90 bp GAAGGGGTTGTTCTCATTCGAATCCAGTGGATGTTCAATGTAGGATaGAGGCATGAAGTTTTTGGATGGGCTGAGAGGCTCGATCCTGGA +
Preference number: 5 (lower is better)
Translates to: EGVVLIRIQWMFNVG*RHEVFGWAERLDPG
Trigger: TCCAGGATCGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: FLSGFFHVDHSVGSWGRGYLSCC*YVALDL
Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: SGLFLSGFFHVDHSVGSWYLSCC*YVALDL
Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS-3UTR CAA 90 bp ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: TPSSGLFLSGFFHVDHSVYLSCC*YVALDL
Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
CDS CCA 90 bp GGTAGTATCATCGTAGTAGAAGGGGTTGTTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGGAGGCATGAAGTTTTTGGATGGGCT +
Preference number: 5 (lower is better)
Translates to: GSIIVVEGVVLIRIQ*MFNVGWRHEVFGWA
Trigger: AGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTCTACTACGATGATACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS CAA 90 bp GATGGGCTGAGAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCTGGATCTGACACTGGATTCGAGGTG +
Preference number: 6 (lower is better)
Translates to: DGLRGSILETAGVPF*LLVCGPGSDTGFEV
Trigger: CACCTCGAATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTCTCAGCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS TCA 72 bp CAGATGAGAGGGGTGGTCTGGACTCCTGGGCTGGTTTaGTCTGGATCTGGGACATTGTCACGAGTAGTCGCA +
Preference number: 6 (lower is better)
Translates to: QMRGVVWTPGLV*SGSGTLSRVVA
Trigger: TGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS GCA 72 bp GGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTGCTTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GHFCQLLGLGLG*CLASCGFCFSG
Trigger: ACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000160689.8
ENSMUST00000162733.8
CDS GCA 72 bp GCTCGATCCTGGAGACTGCAGGGGTACCTTTCTTGCTaGTTGTATGTGGCCCTGGATCTGACACTGGATTCG +
Preference number: 6 (lower is better)
Translates to: ARSWRLQGYLSC*LYVALDLTLDS
Trigger: CGAATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS GCA 72 bp GAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTGGATCTGACACTGGAT +
Preference number: 6 (lower is better)
Translates to: EARSWRLQGYLS*CLYVALDLTLD
Trigger: ATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS GCA 72 bp GGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTTCTCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GHFCQLLGLGLG*CLASCGFFSGP
Trigger: TGGACCAGAGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000202395.4
CDS CCA 72 bp GGTGGTCTGGACTCCTGGGCTGGTTTGATCTGGATCTaGGACATTGTCACGAGTAGTCGCAGAAGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: GGLDSWAGLIWI*DIVTSSRRSLV
Trigger: GACCAGACTTCTGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS CCA 72 bp GAGAGGGGTGGTCTGGACTCCTGGGCTGGTTTGATCTaGATCTGGGACATTGTCACGAGTAGTCGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: ERGGLDSWAGLI*IWDIVTSSRRS
Trigger: ACTTCTGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS CCA 72 bp GACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: DTGFEVAIFVSC*VSVWAAVWLPV
Trigger: CACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS CCA 72 bp GGATCTGGGACATTGTCACGAGTAGTCGCAGAAGTCTaGTCCGCTCTGCTGGGCAGAATCAGGGCGACAATA +
Preference number: 6 (lower is better)
Translates to: GSGTLSRVVAEV*SALLGRIRATI
Trigger: TATTGTCGCCCTGATTCTGCCCAGCAGAGCGGACCAGACTTCTGCGACTACTCGTGACAATGTCCCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202395.4
CDS CAA 72 bp AGAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCTGGATCTGACACTGGA +
Preference number: 6 (lower is better)
Translates to: RGSILETAGVPF*LLVCGPGSDTG
Trigger: TCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS GCA 72 bp TCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SDTGFEVAIFVS*WVSVWAAVWLP
Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000009831.14
ENSMUST00000159753.2
ENSMUST00000159924.8
ENSMUST00000160689.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
ENSMUST00000202395.4
CDS CCA 72 bp ATGTTCAATGTAGGATGGAGGCATGAAGTTTTTGGATaGGCTGAGAGGCTCGATCCTGGAGACTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: MFNVGWRHEVFG*AERLDPGDCRG
Trigger: ACCCCTGCAGTCTCCAGGATCGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS CCA 72 bp GTTCTCATTCGAATCCAGTGGATGTTCAATGTAGGATaGAGGCATGAAGTTTTTGGATGGGCTGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: VLIRIQWMFNVG*RHEVFGWAERL
Trigger: GAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8
CDS CCA 72 bp ATCGTAGTAGAAGGGGTTGTTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGGAGGCATGAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: IVVEGVVLIRIQ*MFNVGWRHEVF
Trigger: AAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTCTACTACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000009831.14
ENSMUST00000159924.8
ENSMUST00000161684.8
ENSMUST00000161805.8
ENSMUST00000162087.8
ENSMUST00000162116.8
ENSMUST00000162250.8
ENSMUST00000162733.8