Pregenerated sensors for FXYD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009687Ensembl transcript IDs: ENSMUST00000009831.14, ENSMUST00000159753.2, ENSMUST00000159924.8, ENSMUST00000160689.8, ENSMUST00000161684.8, ENSMUST00000161805.8, ENSMUST00000162087.8, ENSMUST00000162116.8, ENSMUST00000162250.8, ENSMUST00000162733.8, ENSMUST00000202395.4
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGAACAGCGCCCCCTGCTGCAACCAGAACAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCGAGAATCATCCCTGGGGTGGTTTGT | + |
Preference number: 1 (lower is better) Translates to: RNSAPCCNQNNRPAG*NQQARPRIIPGVVC Trigger: ACAAACCACCCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTGGTTGCAGCAGGGGGCGCTGTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 90 bp | CACGTGACCGAGCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTaGACTCTAGGAACAGCGCCCCCTGCTGCAACCAGAACAACCGCC | + |
Preference number: 1 (lower is better) Translates to: HVTEPRKKRTTEEET*TLGTAPPAATRTTA Trigger: GGCGGTTGTTCTGGTTGCAGCAGGGGGCGCTGTTCCTAGAGTGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGCTCGGTCACGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 90 bp | CTCTGTCCTGTGTGTCTCTGTATCGCTCATCGGGGCACTACCACGTaGCCGAGCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTGCA | + |
Preference number: 1 (lower is better) Translates to: LCPVCLCIAHRGTTT*PSPGRKGQQRKRRA Trigger: TGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGCTCGGTCACGTGGTAGTGCCCCGATGAGCGATACAGAGACACACAGGACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 90 bp | TCAGAGTCAAAGGACTCTGTCTTCTTTGCTGAACCTGGCACACACTaGTGCAGCTGGGCTGGCTCCTTTCTCTCTTCAGCATGGGTGGGT | + |
Preference number: 1 (lower is better) Translates to: SESKDSVFFAEPGTH*CSWAGSFLSSAWVG Trigger: ACCCACCCATGCTGAAGAGAGAAAGGAGCCAGCCCAGCTGCATCAGTGTGTGCCAGGTTCAGCAAAGAAGACAGAGTCCTTTGACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 90 bp | ATCAGGGTGCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATTaGGACAACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAGT | + |
Preference number: 1 (lower is better) Translates to: IRVLARTHLWRFRQN*DNCLHFPPGRKRTS Trigger: ACTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 90 bp | TCCCAGCTCCAGGGTATCCAACTCTCTTCCATCTGTCATGGCCTCTaGACTCACACACACATACACACACACACACACACACACACACAC | + |
Preference number: 1 (lower is better) Translates to: SQLQGIQLSSICHGL*THTHIHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGAGTGCAGAGGCCATGACAGATGGAAGAGAGTTGGATACCCTGGAGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 90 bp | CCTCCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTTGGGCTaGACTGTATTTCAGAGTCAAAGGACTCTGTCTTCTTTGCTGAAC | + |
Preference number: 1 (lower is better) Translates to: PPPPEVDVECFPRLG*TVFQSQRTLSSLLN Trigger: GTTCAGCAAAGAAGACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 90 bp | GAAGTTATAGCTCTGCTTGCCCATCAGTTAGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGCCAGTCTCCTCCCTTCTCTCTTACT | + |
Preference number: 1 (lower is better) Translates to: EVIALLAHQLALGRV*CHRKTSQSPPFSLT Trigger: AGTAAGAGAGAAGGGAGGAGACTGGCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGCTAACTGATGGGCAAGCAGAGCTATAACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 90 bp | CTCACATCCAGCTCCTACCATCTATCTAAGGAGACTCACATCGTCTaGAACTCCCAGCTCCAGGGTATCCAACTCTCTTCCATCTGTCAT | + |
Preference number: 1 (lower is better) Translates to: LTSSSYHLSKETHIV*NSQLQGIQLSSICH Trigger: ATGACAGATGGAAGAGAGTTGGATACCCTGGAGCTGGGAGTTTCAGACGATGTGAGTCTCCTTAGATAGATGGTAGGAGCTGGATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 90 bp | ACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAGTTTGCCCATaGGCTGGAAACAGTACTAATTATCACATAGTCACTGGAGACCGG | + |
Preference number: 1 (lower is better) Translates to: TAYTSHLEEKEPVCP*AGNSTNYHIVTGDR Trigger: CCGGTCTCCAGTGACTATGTGATAATTAGTACTGTTTCCAGCTCATGGGCAAACTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CCA 90 bp | ATGAATGAAGTCCTGTTTTCTCTTCTCACAAATGAAGCCGACCCTTaGCTTGTAAAGAAGCATAACGTAGTATCCACTAGCAGTCATCTG | + |
Preference number: 1 (lower is better) Translates to: MNEVLFSLLTNEADP*LVKKHNVVSTSSHL Trigger: CAGATGACTGCTAGTGGATACTACGTTATGCTTCTTTACAAGCCAAGGGTCGGCTTCATTTGTGAGAAGAGAAAACAGGACTTCATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: AVPRETSLPRVGRPLALSRLQLG*PSGCWP Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: AVPRETSLPRVGRPLALSGGRGW*VGVVWR Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | GCCCAGGAAGAAAAGGACAACAGAGGAAGAGACGTGCACTCTAGGAACAGCGCCAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCG | + |
Preference number: 2 (lower is better) Translates to: AQEEKDNRGRDVHSRNSANRPAG*NQQARP Trigger: CGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTT...GGCGCTGTTCCTAGAGTGCACGTCTCTTCCTCTGTTGTCCTTTTCTTCCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGRLQLG*PSGCWP Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGFGGSS*GAHQGA Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWRLQLG*PSGCWP Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVRLQLG*PSGCWP Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGCTCCAGCTGGGGTaGCCATCAGGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGRLQLG*PSGCWP Trigger: GGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCT...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPFGGSS*GAHQGA Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGFGGSS*GAHQGA Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR CAA 90 bp | CATCAGGGTGCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATaGAGACAACTGCCTACACTTCCCACCTGGAAGAAAAAGAACCAG | + |
Preference number: 2 (lower is better) Translates to: HQGAGPHSPVAIQAK*RQLPTLPTWKKKNQ Trigger: CTGGTTCTTTTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGGGRGW*VGVVWR Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNGGRGW*VGVVWR Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGC | + |
Preference number: 2 (lower is better) Translates to: GPGLESIGDGVEFKKARGALGRV*CHRKTS Trigger: GCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGC...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNFGGSS*GAHQGA Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGGGRGW*VGVVWR Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGAGGCAGGGGGTGGTaGGTTGGTGTAGTTTGGAGG | + |
Preference number: 2 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWGGRGW*VGVVWR Trigger: CCTCCAAACTACACCAACTCACCACCCCCTGCCTCC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTTTGGAGGCTCCAGCTaGGGTGCCCATCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWFGGSS*GAHQGA Trigger: AGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR CAA 90 bp | ACACATCCTCCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTaGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTGTCTTCTTTG | + |
Preference number: 2 (lower is better) Translates to: THPPPPEVDVECFPR*GCTVFQSQRTLSSL Trigger: CAAAGAAGACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGGAGGATGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATCCCAGGCTGAGCCTCTaGATTCAGGTCCTCAAGCAA | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNPRLSL*IQVLKQ Trigger: TTGCTTGAGGACCTGAATTCAGAGGCTCAGCCTGGG...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGAGTTTGCACAGCTTTaGCCAGGGGGTTTCAAGACC | + |
Preference number: 2 (lower is better) Translates to: THTHRFKAIFGRHAPLSQEFAQL*PGGFKT Trigger: GGTCTTGAAACCCCCTGGGCAAAGCTGTGCAAACTC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATACTGAGATGAACAAATaGAGGGCTGTGGTGGGGCAG | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNTEMNK*RAVVGQ Trigger: CTGCCCCACCACAGCCCTGCATTTGTTCATCTCAGT...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAAACAAAACACTCTGTAGGCTCTTaGGGTAGAGGGAGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: HTDSRPSLVDMLLCLKTKHSVGS*GRGRRQ Trigger: CTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTG...TTTTGTTTTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CTCCCAGTGAAGGGGGACAGCAAGATGGCTCAACAAGTAAAGGTGTTTGCTGCTTTTCTCTCTTCAGCATaGGTGGGTGTCACCCAGATA | + |
Preference number: 2 (lower is better) Translates to: LPVKGDSKMAQQVKVFAAFLSSA*VGVTQI Trigger: TATCTGGGTGACACCCACCCATGCTGAAGAGAGAAA...AGCAGCAAACACCTTTACTTGTTGAGCCATCTTGCTGTCCCCCTTCACTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATGAAGAGGTGGTTCAGTaGTTACTCACATCCAGCTCC | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNEEVVQ*LLTSSS Trigger: GGAGCTGGATGTGAGTAACCACTGAACCACCTCTTC...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CCA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATCTGTCTGTGTCTCCCTaGCTTTTCCCACTGTTAGTG | + |
Preference number: 2 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNLSVSP*LFPLLV Trigger: CACTAACAGTGGGAAAAGCCAGGGAGACACAGACAG...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR GCA 90 bp | GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCCTCAAGCAAGCACTTTaGCCACCAATACCTCCTAAA | + |
Preference number: 2 (lower is better) Translates to: GPGLESIGDGVEFKKARGLKQAL*PPIPPK Trigger: TTTAGGAGGTATTGGTGGGCAAAGTGCTTGCTTGAG...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR TCA 90 bp | GGCACACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGGATTGTGAGTTTCCTGTCTTAAAAGGATaGATGAAGTCCTGTTTTCTC | + |
Preference number: 2 (lower is better) Translates to: GTPITSSLRRLKQEDCEFPVLKG*MKSCFL Trigger: GAGAAAACAGGACTTCATTCATCCTTTTAAGACAGG...AAACTCACAATCCTCCTGCTTCAGCCTCCTGAGGCTTGAGGTTATAGGTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CAA 90 bp | CCTAAACCCATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATaGATTCCAGTCCGGTATTTGGTCACAATGAGAACAGCAACCCGC | + |
Preference number: 2 (lower is better) Translates to: PKPMDLFLSYKRFQK*IPVRYLVTMRTATR Trigger: GCGGGTTGCTGTTCTCATTGTGACCAAATACCGGACTGGAATCAATTTCTGGAAGCGTTTATAGCTTAAGAAGAGATCCATGGGTTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 72 bp | GCCCCCTGCTGCAACCAGAACAACCGCCCAGCTGGATaGAACCAGCAGGCTAGGCCGAGAATCATCCCTGGG | + |
Preference number: 3 (lower is better) Translates to: APCCNQNNRPAG*NQQARPRIIPG Trigger: CCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTGGTTGCAGCAGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CCA 72 bp | GTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTaGCCCGCACTCACCTGTGGCGATTCAGGCAAAATT | + |
Preference number: 3 (lower is better) Translates to: VWRLQLGCPSGC*PALTCGDSGKI Trigger: AATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 72 bp | GCTCTGCTTGCCCATCAGTTAGCCCTCGGGAGGGTGTaGTGTCATAGAAAGACCAGCCAGTCTCCTCCCTTC | + |
Preference number: 3 (lower is better) Translates to: ALLAHQLALGRV*CHRKTSQSPPF Trigger: GAAGGGAGGAGACTGGCTGGTCTTTCTATGACAGCACACCCTCCCGAGGGCTAACTGATGGGCAAGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR CCA 72 bp | GCAACCAGCAGGCTAGGCCGAGAATCATCCCTGGGGTaGTTTGTAGGGGTGCTGAGTTTGCACAGCTTTGCC | + |
Preference number: 3 (lower is better) Translates to: ATSRLGRESSLG*FVGVLSLHSFA Trigger: GGCAAAGCTGTGCAAACTCAGCACCCCTACAAACCACCCCAGGGATGATTCTCGGCCTAGCCTGCTGGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR TCA 72 bp | TGGGTGGGTGTCACCCAGATACCCAGGCTGAGCCTCTaGATTCAGGTCCTCAAGCAAGCACTTTGCCCACCA | + |
Preference number: 3 (lower is better) Translates to: WVGVTQIPRLSL*IQVLKQALCPP Trigger: TGGTGGGCAAAGTGCTTGCTTGAGGACCTGAATTCAGAGGCTCAGCCTGGGTATCTGGGTGACACCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR CCA 72 bp | TCAGGTCCAGAGGGCTGTGGTTCGGTTGTGCTTGCCTaGCATGTACAATGTGATGGGGTTGACTCCCTGTGC | + |
Preference number: 3 (lower is better) Translates to: SGPEGCGSVVLA*HVQCDGVDSLC Trigger: GCACAGGGAGTCAACCCCATCACATTGTACATGCCAGGCAAGCACAACCGAACCACAGCCCTCTGGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGVSWCS*EAPAGV Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLVSWCS*EAPAGV Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGVSWCS*EAPAGV Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | CTCCCAGTGAAGGGGGACAGCAAGATGGCTCAACAAGTAAAGGTGTTTGCTGCTGAGACTGCTCAGTGGTaGCTCTTCAGAAGGTCCTGG | + |
Preference number: 3 (lower is better) Translates to: LPVKGDSKMAQQVKVFAAETAQW*LFRRSW Trigger: CCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTC...AGCAGCAAACACCTTTACTTGTTGAGCCATCTTGCTGTCCCCCTTCACTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR TCA 72 bp | AAGGACTCTGTCTTCTTTGCTGAACCTGGCACACACTaGTGCAGCTGGGCTGGCTCCTTTCTCTCTTCAGCA | + |
Preference number: 3 (lower is better) Translates to: KDSVFFAEPGTH*CSWAGSFLSSA Trigger: TGCTGAAGAGAGAAAGGAGCCAGCCCAGCTGCATCAGTGTGTGCCAGGTTCAGCAAAGAAGACAGAGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGVSWCS*EAPAGV Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGTGAGTTGGTGTAGTTaGGAGGCTCCAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGVSWCS*EAPAGV Trigger: CACCCCAGCTGGAGCCTCCAAACTACACCAACTCAC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
3UTR-3UTR CAA 90 bp | TGGAGTGTTTTCCTCGGTTGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTGTCCTATAACTAAGCACTaGGGAGGTAGAGGCAGGAGG | + |
Preference number: 3 (lower is better) Translates to: WSVFLGWAALYFRVKGLCPITKH*GGRGRR Trigger: CCTCCTGCCTCTACCTCCCAAGTGCTTAGTTATAGG...ACAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 72 bp | AGCTCCTACCATCTATCTAAGGAGACTCACATCGTCTaGAACTCCCAGCTCCAGGGTATCCAACTCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: SSYHLSKETHIV*NSQLQGIQLSS Trigger: GGAAGAGAGTTGGATACCCTGGAGCTGGGAGTTTCAGACGATGTGAGTCTCCTTAGATAGATGGTAGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR GCA 72 bp | CAGGGTATCCAACTCTCTTCCATCTGTCATGGCCTCTaGACTCACACACACATACACACACACACACACACA | + |
Preference number: 3 (lower is better) Translates to: QGIQLSSICHGL*THTHIHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTATGTGTGTGTGAGTGCAGAGGCCATGACAGATGGAAGAGAGTTGGATACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR-3UTR CAA 90 bp | CAGGGGCTAAAGAGACTGCTCAGTGGTTGCTCTTCAGAAGGTCCTGGTTTTAATTACAATGTGATGGGGTaGACTCCCTGTGCTGCATTA | + |
Preference number: 3 (lower is better) Translates to: QGLKRLLSGCSSEGPGFNYNVMG*TPCAAL Trigger: TAATGCAGCACAGGGAGTCAACCCCATCACATTGTA...ATTAAAACCAGGACCTTCTGAAGAGCAACCACTGAGCAGTCTCTTTAGCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CCA 72 bp | CAGAAGTTCAAGGTTAAGGTGGAAGAGGTGGTTCAGTaGTTACTCACATCCAGCTCCTACCATCTATCTAAG | + |
Preference number: 3 (lower is better) Translates to: QKFKVKVEEVVQ*LLTSSSYHLSK Trigger: CTTAGATAGATGGTAGGAGCTGGATGTGAGTAACCACTGAACCACCTCTTCCACCTTAACCTTGAACTTCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CCA 72 bp | CACACACACACACACACACAGATTCAAGGCCATCTTTaGTCGACATGCTCCTCTGTCTCAAAACAAAATAAA | + |
Preference number: 3 (lower is better) Translates to: HTHTHTQIQGHL*STCSSVSKQNK Trigger: TTTATTTTGTTTTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR TCA 72 bp | ACTTCCCACCTGGAAGAAAAAGAACCAGTTTGCCCATaGGCTGGAAACAGTACTAATTATCACATAGTCACT | + |
Preference number: 3 (lower is better) Translates to: TSHLEEKEPVCP*AGNSTNYHIVT Trigger: AGTGACTATGTGATAATTAGTACTGTTTCCAGCTCATGGGCAAACTGGTTCTTTTTCTTCCAGGTGGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVLVSAL*WAESGR Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA | + |
Preference number: 4 (lower is better) Translates to: VGVVWRLQLGCPSGCWPALVSAL*WAESGR Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA | + |
Preference number: 4 (lower is better) Translates to: VGVVWRLQLGCPSGCWPAVSALC*AESGRQ Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: VGVVWRLQLGCPSGCWPACWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVGGLDS*AGLIWI Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCTGTCTGGCTTCCTGTaGCTTCTGCTTCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVLSGFL*LLLLWS Trigger: GGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009831.14 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCACTGTCTGGCTTCCTGTaGCTTCTGCTTCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: VGVVWRLQLGCPSGCWPALSGFL*LLLLWS Trigger: GGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAG...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009831.14 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GCTGATCAGCTTGGCACACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGCCCCCAGCCCCTTCTTaGCCTTTCTGCCCATGCCCG | + |
Preference number: 4 (lower is better) Translates to: ADQLGTPITSSLRRLKQEPPAPS*PFCPCP Trigger: CGGGCATGGGCAGAAAGGGCAAGAAGGGGCTGGGGG...CTCCTGCTTCAGCCTCCTGAGGCTTGAGGTTATAGGTGTGCCAAGCTGATCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA | + |
Preference number: 4 (lower is better) Translates to: AVPRETSLPRVGRPLALSVSALC*AESGRQ Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: AVPRETSLPRVGRPLALSCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGCTTCCTGTGGCTTCTaGTTCTCTGGTCCAGATGAG | + |
Preference number: 4 (lower is better) Translates to: AVPRETSLPRVGRPLALSASCGF*FSGPDE Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009831.14 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVTLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: VGVVWRLQLGCPSGCWPATLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: AVPRETSLPRVGRPLALSVWAAV*LPVASS Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 |
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CDS-3UTR GCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA | + |
Preference number: 4 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGVSALC*AESGRQ Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLLVSAL*WAESGR Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
||
CDS-3UTR GCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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3UTR CAA 72 bp | CCCCCACCAGAGGTAGACGTGGAGTGTTTTCCTCGGTaGGGCTGCACTGTATTTCAGAGTCAAAGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: PPPEVDVECFPR*GCTVFQSQRTL Trigger: CAGAGTCCTTTGACTCTGAAATACAGTGCAGCCCAACCGAGGAAAACACTCCACGTCTACCTCTGGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CAA 72 bp | GCTGGCCCGCACTCACCTGTGGCGATTCAGGCAAAATaGAGACAACTGCCTACACTTCCCACCTGGAAGAAA | + |
Preference number: 4 (lower is better) Translates to: AGPHSPVAIQAK*RQLPTLPTWKK Trigger: TTTCTTCCAGGTGGGAAGTGTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGLVSAL*WAESGR Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: AVPRETSLPRVGRPLALSTLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGGLGLG*CLASCG Trigger: GCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGAGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC | + |
Preference number: 4 (lower is better) Translates to: WKRDHVDLSEQPQQCLGRGGLDS*AGLIWI Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 |
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CDS-3UTR CCA 90 bp | ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC | + |
Preference number: 4 (lower is better) Translates to: THTHTHTDSRPSLVDMLLGGLDS*AGLIWI Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...GAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGVWAAV*LPVASA Trigger: AGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009831.14 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLVWAAV*LPVASS Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 |
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CDS-3UTR GCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTTGGTGTCTGCCCTCTaGTGGGCAGAATCAGGGCGA | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGLVSAL*WAESGR Trigger: TCGCCCTGATTCTGCCCAGCAGAGGGCAGACACCAA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: WKRDHVDLSEQPQQCLGRQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 |
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CDS-3UTR GCA 90 bp | GGACCTGGATTAGAGTCAATTGGAGATGGCGTAGAGTTTAAAAAGGCACGGGGCCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: GPGLESIGDGVEFKKARGQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...GCCCCGTGCCTTTTTAAACTCTACGCCATCTCCAATTGACTCTAATCCAGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVVSALC*AESGRQ Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGTGTCTGCCCTCTGCTaGGCAGAATCAGGGCGACAA | + |
Preference number: 4 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWVSALC*AESGRQ Trigger: TTGTCGCCCTGATTCTGCCCAGCAGAGGGCAGACAC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTGCTGGGTCTCGGTTTaGGCTGCTGTCTGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWCWVSV*AAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGVWAAV*LPVASS Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 |
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CDS-3UTR GCA 90 bp | ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGCTTCCTGTGGCTTCTaGTTCTCTGGTCCAGATGAG | + |
Preference number: 4 (lower is better) Translates to: THTHRFKAIFGRHAPLSQASCGF*FSGPDE Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGGGLDS*AGLIWI Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATC | + |
Preference number: 4 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWGGLDS*AGLIWI Trigger: GATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | ACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCTGTCTCAAGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: THTHRFKAIFGRHAPLSQAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...TTGAGACAGAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTACAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR GCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGQGYLS*CLYVAL Trigger: CAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTG...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGVWAAV*LPVASS Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAAC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 |
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CDS-3UTR GCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCT | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVAIFVS*WVSVWA Trigger: AGCCCAAACCGAGACCCAGCAACTGACAAAAATGGC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGTLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVTLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGACACTGGATTCGAGGTaGCCATTTTTGTCAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWTLDSR*PFLSVA Trigger: AGCAACTGACAAAAATGGCCACCTCGAATCCAGTGT...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTACTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CCA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGG | + |
Preference number: 4 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGLIRIQ*MFNVGW Trigger: CCATCCTACATTGAACATCCACTGGATTCGAATGAG...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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3UTR CAA 72 bp | TATAACTGCAGACCCATGGAATCCAATGCCCTCGTCTaGTGTGCAGACATACATGCAGATAAAACACCCATA | + |
Preference number: 4 (lower is better) Translates to: YNCRPMESNALV*CADIHADKTPI Trigger: TATGGGTGTTTTATCTGCATGTATGTCTGCACACAAGACGAGGGCATTGGATTCCATGGGTCTGCAGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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3UTR CAA 72 bp | ATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATaGATTCCAGTCCGGTATTTGGTCACAATGAGAACA | + |
Preference number: 4 (lower is better) Translates to: MDLFLSYKRFQK*IPVRYLVTMRT Trigger: TGTTCTCATTGTGACCAAATACCGGACTGGAATCAATTTCTGGAAGCGTTTATAGCTTAAGAAGAGATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCATTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: VGVVWRLQLGCPSGCWPALLGLG*GCCLAS Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVWMWAF*VSALCW Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGGAGGAGGCAGGGGGTGGTGAGTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: GRRQGVVSWCSLEAPAGVSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CACCCCAGCTGGAGCCTCCAAACTACACCAACTCACCACCCCCTGCCTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: VGVVWRLQLGCPSGCWPAAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GTTGGTGTAGTTTGGAGGCTCCAGCTGGGGTGCCCATCAGGGTGCTGGCCCGCAGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: VGVVWRLQLGCPSGCWPAGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...TGCGGGCCAGCACCCTGATGGGCACCCCAGCTGGAGCCTCCAAACTACACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: AVPRETSLPRVGRPLALSLLGLG*GCCLAS Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGCCCCCAGCCCCTTCTaGCCCTTTCTGCCCATGCCC | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLAPSPF*PFLPMP Trigger: GGGCATGGGCAGAAAGGGCAAGAAGGGGCTGGGGGC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | CAGAACAACCGCCCAGCTGGATGCAACCAGCAGGCTAGGCCGAGAATCATCCCTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: QNNRPAGCNQQARPRIIPGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...AGGGATGATTCTCGGCCTAGCCTGCTGGTTGCATCCAGCTGGGCGGTTGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: AVPRETSLPRVGRPLALSSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: AVPRETSLPRVGRPLALSAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: AVPRETSLPRVGRPLALSGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | GGCTTCTGCTTCTCTGGTCCAGATGAGAGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATCTGGGACATTGTCACGAGTAGTCGC | + |
Preference number: 5 (lower is better) Translates to: GFCFSGPDERGGLDS*AGLIWIWDIVTSSR Trigger: GCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTGGACCAGAGAAGCAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000160689.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | GTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTGCTTCTCTGGTCCAGATGAGAGGGGTG | + |
Preference number: 5 (lower is better) Translates to: VAIFVSCWVSVWAAV*LPVASASLVQMRGV Trigger: CACCCCTCTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000160689.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | GTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTGCTGTCTaGCTTCCTGTGGCTTCTTCTCTGGTCCAGATGAGAGGGGTGGTC | + |
Preference number: 5 (lower is better) Translates to: VAIFVSCWVSVWAAV*LPVASSLVQMRGVV Trigger: GACCACCCCTCTCATCTGGACCAGAGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000202395.4 |
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CDS CCA 90 bp | CCTGGATCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTGGCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: PGSDTGFEVAIFVSC*VSVWAAVWLPVASA Trigger: AGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGATCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000160689.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | TGTGGCTTCTTCTCTGGTCCAGATGAGAGGGGTGGTCTGGACTCCTaGGCTGGTTTGATCTGGATCTGGGACATTGTCACGAGTAGTCGC | + |
Preference number: 5 (lower is better) Translates to: CGFFSGPDERGGLDS*AGLIWIWDIVTSSR Trigger: GCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTGGACCAGAGAAGAAGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000202395.4 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLLLGLG*GCCLAS Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GCAGTGCCTAGGGAGACCTCTCTCCCCAGGGTGGGAAGACCATTAGCCTTAAGCTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG | + |
Preference number: 5 (lower is better) Translates to: AVPRETSLPRVGRPLALSYLSCC*YVALDL Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...GCTTAAGGCTAATGGTCTTCCCACCCTGGGGAGAGAGGTCTCCCTAGGCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS GCA 90 bp | ATTCGAGGTGGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTGCTTCTCTGGTCCAGATGAG | + |
Preference number: 5 (lower is better) Translates to: IRGGHFCQLLGLGLG*CLASCGFCFSGPDE Trigger: CTCATCTGGACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000160689.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | CCTGGATCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTGGCTTCTTCT | + |
Preference number: 5 (lower is better) Translates to: PGSDTGFEVAIFVSC*VSVWAAVWLPVASS Trigger: AGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGATCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000202395.4 |
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CDS-3UTR CAA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLWMWAF*VSALCW Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTCTCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: RDHVDLSEQPQQCLGRPLGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GAGAGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGWMWAF*VSALCW Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATTGCTGGGTCTCGGTTaGGGCTGCTGTCTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVLLGLG*GCCLAS Trigger: GGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGAGGAGGCAGGGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG | + |
Preference number: 5 (lower is better) Translates to: FFHVDHSVGSWGRGRRQGYLSCC*YVALDL Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCCCTGCCTCCTCCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TGGAAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGAGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: WKRDHVDLSEQPQQCLGRAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...TCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 |
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CDS-3UTR CAA 90 bp | AAGAGAGACCATGTGGATTTATCTGAACAGCCACAGCAGTGCCTAGGGAGACCTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: KRDHVDLSEQPQQCLGRPAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...AGGTCTCCCTAGGCACTGCTGTGGCTGTTCAGATAAATCCACATGGTCTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | CCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: PSSGLFLSGFFHVDHSVGGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCTCCTCGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: THTHTHTDSRPSLVDMLLGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...GAGGAGCATGTCGACCAAAGATGGCCTTGAATCTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGWMWAF*VSALCW Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | GGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: GLFLSGFFHVDHSVGSWGSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...ACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTGGATGTGGGCTTTTTaGGTGTCTGCCCTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGWMWAF*VSALCW Trigger: CCAGCAGAGGGCAGACACCAAAAAAGCCCACATCCA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGGCCATTTTTGTCAGTaGCTGGGTCTCGGTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGGHFCQ*LGLGLG Trigger: GCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATCGAGGTGGCCATTTTaGTCAGTTGCTGGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVSRWPF*SVAGSR Trigger: CCGAGACCCAGCAACTGACAAAAATGGCCACCTCGA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCT | + |
Preference number: 5 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWAGVPF*LLVCGP Trigger: AGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGAGGCATGAAGTTTTaGGATGGGCTGAGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWGGMKF*DGLRGS Trigger: CGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCC...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | GAAGGGGTTGTTCTCATTCGAATCCAGTGGATGTTCAATGTAGGATaGAGGCATGAAGTTTTTGGATGGGCTGAGAGGCTCGATCCTGGA | + |
Preference number: 5 (lower is better) Translates to: EGVVLIRIQWMFNVG*RHEVFGWAERLDPG Trigger: TCCAGGATCGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | TTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGGGTAGAGGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG | + |
Preference number: 5 (lower is better) Translates to: FLSGFFHVDHSVGSWGRGYLSCC*YVALDL Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCCTCTACCCCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | AGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTAGGCTCTTGGTACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG | + |
Preference number: 5 (lower is better) Translates to: SGLFLSGFFHVDHSVGSWYLSCC*YVALDL Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...CCAAGAGCCTACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS-3UTR CAA 90 bp | ACTCCCTCCAGTGGCCTCTTCCTTTCAGGATTCTTTCATGTTGATCACTCTGTATACCTTTCTTGCTGCTaGTATGTGGCCCTGGATCTG | + |
Preference number: 5 (lower is better) Translates to: TPSSGLFLSGFFHVDHSVYLSCC*YVALDL Trigger: CAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTA...TACAGAGTGATCAACATGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 |
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CDS CCA 90 bp | GGTAGTATCATCGTAGTAGAAGGGGTTGTTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGGAGGCATGAAGTTTTTGGATGGGCT | + |
Preference number: 5 (lower is better) Translates to: GSIIVVEGVVLIRIQ*MFNVGWRHEVFGWA Trigger: AGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTCTACTACGATGATACTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS CAA 90 bp | GATGGGCTGAGAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCTGGATCTGACACTGGATTCGAGGTG | + |
Preference number: 6 (lower is better) Translates to: DGLRGSILETAGVPF*LLVCGPGSDTGFEV Trigger: CACCTCGAATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTCTCAGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS TCA 72 bp | CAGATGAGAGGGGTGGTCTGGACTCCTGGGCTGGTTTaGTCTGGATCTGGGACATTGTCACGAGTAGTCGCA | + |
Preference number: 6 (lower is better) Translates to: QMRGVVWTPGLV*SGSGTLSRVVA Trigger: TGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS GCA 72 bp | GGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTGCTTCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: GHFCQLLGLGLG*CLASCGFCFSG Trigger: ACCAGAGAAGCAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000160689.8 ENSMUST00000162733.8 |
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CDS GCA 72 bp | GCTCGATCCTGGAGACTGCAGGGGTACCTTTCTTGCTaGTTGTATGTGGCCCTGGATCTGACACTGGATTCG | + |
Preference number: 6 (lower is better) Translates to: ARSWRLQGYLSC*LYVALDLTLDS Trigger: CGAATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS GCA 72 bp | GAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTTaGTGCTTGTATGTGGCCCTGGATCTGACACTGGAT | + |
Preference number: 6 (lower is better) Translates to: EARSWRLQGYLS*CLYVALDLTLD Trigger: ATCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS GCA 72 bp | GGCCATTTTTGTCAGTTGCTGGGTCTCGGTTTGGGCTaGTGTCTGGCTTCCTGTGGCTTCTTCTCTGGTCCA | + |
Preference number: 6 (lower is better) Translates to: GHFCQLLGLGLG*CLASCGFFSGP Trigger: TGGACCAGAGAAGAAGCCACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000202395.4 |
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CDS CCA 72 bp | GGTGGTCTGGACTCCTGGGCTGGTTTGATCTGGATCTaGGACATTGTCACGAGTAGTCGCAGAAGTCTGGTC | + |
Preference number: 6 (lower is better) Translates to: GGLDSWAGLIWI*DIVTSSRRSLV Trigger: GACCAGACTTCTGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS CCA 72 bp | GAGAGGGGTGGTCTGGACTCCTGGGCTGGTTTGATCTaGATCTGGGACATTGTCACGAGTAGTCGCAGAAGT | + |
Preference number: 6 (lower is better) Translates to: ERGGLDSWAGLI*IWDIVTSSRRS Trigger: ACTTCTGCGACTACTCGTGACAATGTCCCAGATCCAGATCAAACCAGCCCAGGAGTCCAGACCACCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS CCA 72 bp | GACACTGGATTCGAGGTGGCCATTTTTGTCAGTTGCTaGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCTGTG | + |
Preference number: 6 (lower is better) Translates to: DTGFEVAIFVSC*VSVWAAVWLPV Trigger: CACAGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS CCA 72 bp | GGATCTGGGACATTGTCACGAGTAGTCGCAGAAGTCTaGTCCGCTCTGCTGGGCAGAATCAGGGCGACAATA | + |
Preference number: 6 (lower is better) Translates to: GSGTLSRVVAEV*SALLGRIRATI Trigger: TATTGTCGCCCTGATTCTGCCCAGCAGAGCGGACCAGACTTCTGCGACTACTCGTGACAATGTCCCAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202395.4 |
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CDS CAA 72 bp | AGAGGCTCGATCCTGGAGACTGCAGGGGTACCTTTCTaGCTGCTTGTATGTGGCCCTGGATCTGACACTGGA | + |
Preference number: 6 (lower is better) Translates to: RGSILETAGVPF*LLVCGPGSDTG Trigger: TCCAGTGTCAGATCCAGGGCCACATACAAGCAGCAAGAAAGGTACCCCTGCAGTCTCCAGGATCGAGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS GCA 72 bp | TCTGACACTGGATTCGAGGTGGCCATTTTTGTCAGTTaGTGGGTCTCGGTTTGGGCTGCTGTCTGGCTTCCT | + |
Preference number: 6 (lower is better) Translates to: SDTGFEVAIFVS*WVSVWAAVWLP Trigger: AGGAAGCCAGACAGCAGCCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTGTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000009831.14 ENSMUST00000159753.2 ENSMUST00000159924.8 ENSMUST00000160689.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 ENSMUST00000202395.4 |
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CDS CCA 72 bp | ATGTTCAATGTAGGATGGAGGCATGAAGTTTTTGGATaGGCTGAGAGGCTCGATCCTGGAGACTGCAGGGGT | + |
Preference number: 6 (lower is better) Translates to: MFNVGWRHEVFG*AERLDPGDCRG Trigger: ACCCCTGCAGTCTCCAGGATCGAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS CCA 72 bp | GTTCTCATTCGAATCCAGTGGATGTTCAATGTAGGATaGAGGCATGAAGTTTTTGGATGGGCTGAGAGGCTC | + |
Preference number: 6 (lower is better) Translates to: VLIRIQWMFNVG*RHEVFGWAERL Trigger: GAGCCTCTCAGCCCATCCAAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |
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CDS CCA 72 bp | ATCGTAGTAGAAGGGGTTGTTCTCATTCGAATCCAGTaGATGTTCAATGTAGGATGGAGGCATGAAGTTTTT | + |
Preference number: 6 (lower is better) Translates to: IVVEGVVLIRIQ*MFNVGWRHEVF Trigger: AAAAACTTCATGCCTCCATCCTACATTGAACATCCACTGGATTCGAATGAGAACAACCCCTTCTACTACGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000009831.14 ENSMUST00000159924.8 ENSMUST00000161684.8 ENSMUST00000161805.8 ENSMUST00000162087.8 ENSMUST00000162116.8 ENSMUST00000162250.8 ENSMUST00000162733.8 |