Pregenerated sensors for FXYD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004988Ensembl transcript IDs: ENSMUST00000005114.10, ENSMUST00000203066.3, ENSMUST00000203082.3, ENSMUST00000203433.3, ENSMUST00000204214.3, ENSMUST00000204950.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGAAGTTGTCAAAAACCTaGCTCCAAACTTGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PFPVNEDLTVCSREAILEKLSKT*LQTWSC Trigger: ACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTT...CTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTTTGCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGAAGTTGTCAAAAACCTaGCTCCAAACTTGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ISFATPFPVNEDLTVCSRKLSKT*LQTWSC Trigger: ACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTT...CCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGCAAAGCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR TCA 90 bp | GAGAGGAAGGTCTCCAGAGGAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTGACATCGATCCAGCCTaGGTTCAGGGCCATGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: ERKVSRGEVRQKVVKNLPDIDPA*VQGHGN Trigger: ATTGCCATGGCCCTGAACTCAGGCTGGATCGATGTC...AGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCTGGAGACCTTCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| CDS-3UTR TCA 90 bp | AGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGTTCGACATCGATCCAGCCTaGGTTCAGGGCCATGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: RSTAESCQKPASKLGPVFDIDPA*VQGHGN Trigger: ATTGCCATGGCCCTGAACTCAGGCTGGATCGATGTC...GAACACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| CDS-3UTR GCA 90 bp | GCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCGGGTACGCCTACATTTaGACTTGCCACTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ATPFPVNEDLTVCSREAIGYAYI*TCHSGP Trigger: TGGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCC...GATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR GCA 90 bp | CCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGGGGTACGCCTACATTTaGACTTGCCACTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PFPVNEDLTVCSREAILEGYAYI*TCHSGP Trigger: TGGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCC...CTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CCA 90 bp | TCTCCAGAGGAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGGGTATTGGCAGAGCCTaGAATGATGAGTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPEEKYGRKLSKTCLQTWGIGRA*NDEWSG Trigger: GCCACTCCACTCATCATTCCAGGCTCTGCCAATACC...CCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR GCA 90 bp | AGAGGAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGGCAATTCCAGCGATaGACAGGAGCCCTCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: RGEVRQKVVKNLPPNLVLWQFQR*TGALQK Trigger: TTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCA...CAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR GCA 90 bp | GAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGTTGCCTACATTTGCACTTaGCACTCAGGGCCATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: EKYGRKLSKTCLQTWSCVAYICT*HSGPWQ Trigger: TTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGC...AACACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CCA 90 bp | AATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGAGGAAGGTCTCCGGTATTGGCAGAGCCTaGAATGATGAGTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NEDLTVCSREAILERKVSGIGRA*NDEWSG Trigger: GCCACTCCACTCATCATTCCAGGCTCTGCCAATACC...GGAGACCTTCCTCTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR CCA 90 bp | GCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCGGTATTGGCAGAGCCTaGAATGATGAGTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ATPFPVNEDLTVCSREAIGIGRA*NDEWSG Trigger: GCCACTCCACTCATCATTCCAGGCTCTGCCAATACC...GATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR CCA 90 bp | AATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGAGGAAGGTCTCCCTGAGTTCAGGGCCATaGCAATTCCAGCGATGCACA | + |
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Preference number: 4 (lower is better) Translates to: NEDLTVCSREAILERKVSLSSGP*QFQRCT Trigger: TGTGCATCGCTGGAATTGCCATGGCCCTGAACTCAG...GGAGACCTTCCTCTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| 3UTR CAA 72 bp | AGAGGAAGGTCTCCAGAGGAGAAGTACGGCAGAAAGTaGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RGRSPEEKYGRK*SKTCLQTWSCV Trigger: AACACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCTGGAGACCTTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR GCA 90 bp | AAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGTTCAGTGGCAATTCCAGCGATaGACAGGAGCCCTCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: KYGRKLSKTCLQTWSCVQWQFQR*TGALQK Trigger: TTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCA...CTGAACACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGAGGGCCTACATTTGCACTTaGCACTCAGGGCCATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FPVNEDLTVCSREAILERAYICT*HSGPWQ Trigger: TTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGC...CCTCTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CCA 90 bp | ACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGGTATTGGCAGAGCCTaGAATGATGAGTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TPFPVNEDLTVCSREAILGIGRA*NDEWSG Trigger: GCCACTCCACTCATCATTCCAGGCTCTGCCAATACC...CAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR CCA 90 bp | AGCTTTGCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAACCTGCCTCCAAACTTaGTCCTGGAATGATGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SFATPFPVNEDLTVCSRETCLQT*SWNDEW Trigger: CCACTCATCATTCCAGGACCAAGTTTGGAGGCAGGT...TTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGCAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203066.3 |
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| CDS-3UTR GCA 90 bp | AAAATCAGCTTTGCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTTGGCAATTCCAGCGATaGACAGGAGCCCTCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: KISFATPFPVNEDLTVCSWQFQR*TGALQK Trigger: TTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCA...AGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGCAAAGCTGATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR CCA 90 bp | AAAATCAGCTTTGCCACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTCTCCAAACTTGGTCCTaGAATGATGAGTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KISFATPFPVNEDLTVCSLQTWS*NDEWSG Trigger: GCCACTCCACTCATCATTCCAGGACCAAGTTTGGAG...AGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGTGGCAAAGCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203066.3 |
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| CDS GCA 90 bp | GCCTACATTTGCACTTGCCACTCAGGGCCATGGCAATTCCAGCGATaGACAGGAGCCCTCCAAAAATCAATCCTCCCAGCTGCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AYICTCHSGPWQFQR*TGALQKSILPAAGS Trigger: AGAGCCTGCAGCTGGGAGGATTGATTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS CCA 90 bp | TCTCCCAGTCATAGTAGAAGGGACTGTCTTTATCAACTGGGTCACTaGCTTCCAAGGCCGGCAGACCTGCTAGCAGCAGGAGAAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: SPSHSRRDCLYQLGH*LPRPADLLAAGERH Trigger: GTGCCTTTCTCCTGCTGCTAGCAGGTCTGCCGGCCTTGGAAGCCAGTGACCCAGTTGATAAAGACAGTCCCTTCTACTATGACTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000203433.3 ENSMUST00000204214.3 ENSMUST00000204950.3 |
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| CDS-3UTR CAA 90 bp | TCTCCAGAGGAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTGGGTACGCCTACATTaGCACTTGCCACTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SPEEKYGRKLSKTCLQTWWVRLH*HLPLRA Trigger: GGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCCA...CCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCTGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGAGGAGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGTGGGTACGCCTACATTaGCACTTGCCACTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSRGEVRQKVVKNLPPNLWVRLH*HLPLRA Trigger: GGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCCA...CAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCTCCTCTGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CAA 90 bp | AGAAGTACGGCAGAAAGTTGTCAAAAACCTGCCTCCAAACTTGGTCCTGTGTTCCGCCTACATTTGCACTaGCCACTCAGGGCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: RSTAESCQKPASKLGPVFRLHLH*PLRAMA Trigger: TGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGCG...GAACACAGGACCAAGTTTGGAGGCAGGTTTTTGACAACTTTCTGCCGTACTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CAA 90 bp | CCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGTGGGTACGCCTACATTaGCACTTGCCACTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PFPVNEDLTVCSREAILEWVRLH*HLPLRA Trigger: GGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCCA...CTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CAA 90 bp | ACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGCGCCTACATTTGCACTaGCCACTCAGGGCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: TPFPVNEDLTVCSREAILRLHLH*PLRAMA Trigger: TGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGCG...CAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS-3UTR CAA 90 bp | AATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGGAGAGGAAGGTCTCCCGCCTACATTTGCACTaGCCACCTAGGAGAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: NEDLTVCSREAILERKVSRLHLH*PPRRRG Trigger: CCCTCTTCTCCTAGGTGGCAAGTGCAAATGTAGGCG...GGAGACCTTCCTCTCCAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| CDS-3UTR CAA 90 bp | ACACCCTTTCCTGTCAATGAAGACTTAACAGTATGTTCTAGGGAAGCCATCCTGCGCCTACATTTGCACTaGCCACCTAGGAGAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: TPFPVNEDLTVCSREAILRLHLH*PPRRRG Trigger: CCCTCTTCTCCTAGGTGGCAAGTGCAAATGTAGGCG...CAGGATGGCTTCCCTAGAACATACTGTTAAGTCTTCATTGACAGGAAAGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| CDS GCA 72 bp | TGCACTTGCCACTCAGGGCCATGGCAATTCCAGCGATaGACAGGAGCCCTCCAAAAATCAATCCTCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CTCHSGPWQFQR*TGALQKSILPA Trigger: AGCTGGGAGGATTGATTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCATGGCCCTGAGTGGCAAGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS CCA 72 bp | GGGTACGCCTACATTTGCACTTGCCACTCAGGGCCATaGCAATTCCAGCGATGCACAGGAGCCCTCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GYAYICTCHSGP*QFQRCTGALQK Trigger: TTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS CCA 72 bp | GAAGAGGGACATCGATCCAGCCTGAGTTCAGGGCCATaGCAATTCCAGCGATGCACAGGAGCCCTCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: EEGHRSSLSSGP*QFQRCTGALQK Trigger: TTTTTGGAGGGCTCCTGTGCATCGCTGGAATTGCCATGGCCCTGAACTCAGGCTGGATCGATGTCCCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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| CDS CAA 72 bp | CCAGGTAAGGAACTGGGCTTATGGGTACGCCTACATTaGCACTTGCCACTCAGGGCCATGGCAATTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PGKELGLWVRLH*HLPLRAMAIPA Trigger: CGCTGGAATTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCCATAAGCCCAGTTCCTTACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS CAA 72 bp | AAGGAACTGGGCTTATGGGTACGCCTACATTTGCACTaGCCACTCAGGGCCATGGCAATTCCAGCGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: KELGLWVRLHLH*PLRAMAIPAMH Trigger: GTGCATCGCTGGAATTGCCATGGCCCTGAGTGGCAAGTGCAAATGTAGGCGTACCCATAAGCCCAGTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005114.10 ENSMUST00000203066.3 ENSMUST00000203082.3 ENSMUST00000204214.3 |
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| CDS CAA 72 bp | AAGGAACTGGGCTTATGGGTACGCCTACATTTGCACTaGCCACCTAGGAGAAGAGGGACATCGATCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KELGLWVRLHLH*PPRRRGTSIQP Trigger: AGGCTGGATCGATGTCCCTCTTCTCCTAGGTGGCAAGTGCAAATGTAGGCGTACCCATAAGCCCAGTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203433.3 ENSMUST00000204950.3 |
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