Pregenerated sensors for FXYD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057092Ensembl transcript IDs: ENSMUST00000072331.13, ENSMUST00000167369.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTCCTGCATGCCAGTGCCTGCCCCAGCATCTGCCCACCTCCCTaGCGCCCGCAGCCTCACTCCAAGCTCCACACAGAGTCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: QLLHASACPSICPPP*RPQPHSKLHTESLA Trigger: TGCCAGAGACTCTGTGTGGAGCTTGGAGTGAGGCTGCGGGCGGCAGGGAGGTGGGCAGATGCTGGGGCAGGCACTGGCATGCAGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | AGATTCAGCCACCAGCTCCTGCATGCCAGTGCCTGCCCCAGCATCTaGCCACCTCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCACACA | + |
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Preference number: 1 (lower is better) Translates to: RFSHQLLHASACPSI*PPPCRPQPHSKLHT Trigger: TGTGTGGAGCTTGGAGTGAGGCTGCGGGCGGCAGGGAGGTGGGCAGATGCTGGGGCAGGCACTGGCATGCAGGAGCTGGTGGCTGAATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | TCCGCTTTGAGTCCGATAAAGGGATCCTGGAGCCACTACAGGAGTTaGGCCCACCGGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SALSPIKGSWSHYRS*AHRPWWPLEPLPKS Trigger: TGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | TCGCCTTCAGCCAAGTCTTCCGCTTTGAGTCCGATAAAGGGATCCTaGAGCCACTACAGGAGTTGGGCCCACCGGCCTTGGTGGCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SPSAKSSALSPIKGS*SHYRSWAHRPWWPL Trigger: GAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGAAGACTTGGCTGAAGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR TCA 90 bp | CTGCCCATGGAGGGAAGGGGCAAATCCCATGCCCACCATAGGGCATaGTGTGCAGGTCTAAGCGAGATTCAGCCACCAGCTCCTGCATGC | + |
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Preference number: 1 (lower is better) Translates to: LPMEGRGKSHAHHRA*CAGLSEIQPPAPAC Trigger: GCATGCAGGAGCTGGTGGCTGAATCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCCCTCCATGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR TCA 90 bp | GGCCCCACGCAGATCTACCAGCACCATGAATTGGATCTCAGTGCCTaGAGCTGGGAAAGACCCTGGAAGTGGCTGTGGGGTATTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GPTQIYQHHELDLSA*SWERPWKWLWGILG Trigger: TCCCAGAATACCCCACAGCCACTTCCAGGGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | TCCAGGATGACAGGCGGGCTCCAGGTTCTAACTGCTTCTAAATCCTaGAGGTCATGCGCTGGGACGGCTCCATGTTCCGACTGTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: SRMTGGLQVLTASKS*RSCAGTAPCSDCYS Trigger: GCTGTAACAGTCGGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAACCTGGAGCCCGCCTGTCATCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | CAGCGTGCTTCAAGGGCCCCACGCAGATCTACCAGCACCATGAATTaGATCTCAGTGCCTGAAGCTGGGAAAGACCCTGGAAGTGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: QRASRAPRRSTSTMN*ISVPEAGKDPGSGC Trigger: ACAGCCACTTCCAGGGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTGAAGCACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR TCA 90 bp | ATTCGCAGCGTGCTTCAAGGGCCCCACGCAGATCTACCAGCACCATaGATTGGATCTCAGTGCCTGAAGCTGGGAAAGACCCTGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: IRSVLQGPHADLPAP*IGSQCLKLGKTLEV Trigger: CACTTCCAGGGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTGAAGCACGCTGCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | GTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTaGGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTGCGCA | + |
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Preference number: 1 (lower is better) Translates to: VTVAGQFLGPVLSCL*ACLLPKAECFYACA Trigger: TGCGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | ACAGGCGGGCTCCAGGTTCTAACTGCTTCTAAATCCTGCAGGTCATaGGCTGGGACGGCTCCATGTTCCGACTGTTACAGCAACTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: TGGLQVLTASKSCRS*AGTAPCSDCYSNFH Trigger: ATGGAAGTTGCTGTAACAGTCGGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAACCTGGAGCCCGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | GGTCACTGGAGGGTCTCACGCTGTGTGGCCACTGTAGAGTATCAGTaGTGTCCTGGGAAATTACAGGTCTTACAGGGACAGCGGGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: GHWRVSRCVATVEYQ*CPGKLQVLQGQRVN Trigger: ATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTGATACTCTACAGTGGCCACACAGCGTGAGACCCTCCAGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | TGCCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTaGGCAGTAAAAGTGAAGCAGGAAAGAGGAGTCTGGAGGCGTCAC | + |
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Preference number: 1 (lower is better) Translates to: CLCACLLPKAECFYA*AVKVKQERGVWRRH Trigger: GTGACGCCTCCAGACTCCTCTTTCCTGCTTCACTTTTACTGCGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGCGCACAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | TGTGATGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTaGCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCG | + |
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Preference number: 1 (lower is better) Translates to: CDVTVAGQFLGPVLS*LCACLLPKAECFYA Trigger: CGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 90 bp | TTTGCCCAAGTCACCGTAGCAGGAAGACGCTTTCTATTCGCAGCGTaGTTCAAGGGCCCCACGCAGATCTACCAGCACCATGAATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: FAQVTVAGRRFLFAA*FKGPTQIYQHHELD Trigger: ATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTGAAGCACGCTGCGAATAGAAAGCGTCTTCCTGCTACGGTGACTTGGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | CTTTTCACTCCCAGAAGTGTCCCTAGTTTGCCACTAGAACTTAAGTaGCACAGAAGGCTGCCCATGGAGGGAAGGGGCAAATCCCATGCC | + |
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Preference number: 1 (lower is better) Translates to: LFTPRSVPSLPLELK*HRRLPMEGRGKSHA Trigger: GGCATGGGATTTGCCCCTTCCCTCCATGGGCAGCCTTCTGTGCCACTTAAGTTCTAGTGGCAAACTAGGGACACTTCTGGGAGTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | GAGGGTCTCACGCTGTGTGGCCACTGTAGAGTATCAGTGGTGTCCTaGGAAATTACAGGTCTTACAGGGACAGCGGGTGAATGGAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: EGLTLCGHCRVSVVS*EITGLTGTAGEWKG Trigger: ACCTTTCCATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTGATACTCTACAGTGGCCACACAGCGTGAGACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | GTGGTGTCCTGGGAAATTACAGGTCTTACAGGGACAGCGGGTGAATaGAAAGGTCTGGTGATAAAGTGGGGGCCGCTCAACATAAACAAG | + |
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Preference number: 1 (lower is better) Translates to: VVSWEITGLTGTAGE*KGLVIKWGPLNINK Trigger: CTTGTTTATGTTGAGCGGCCCCCACTTTATCACCAGACCTTTCCATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR TCA 90 bp | ATCAGTGGTGTCCTGGGAAATTACAGGTCTTACAGGGACAGCGGGTaGATGGAAAGGTCTGGTGATAAAGTGGGGGCCGCTCAACATAAA | + |
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Preference number: 1 (lower is better) Translates to: ISGVLGNYRSYRDSG*MERSGDKVGAAQHK Trigger: TTTATGTTGAGCGGCCCCCACTTTATCACCAGACCTTTCCATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 90 bp | TCAGTTATTCAAGGGGTCTCCAGGAGGGAGCAGTGGAGATTAGAATaGGAATCAGGGATCACAGATACAAGAGTAGAGAAGGTGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SVIQGVSRREQWRLE*ESGITDTRVEKVEA Trigger: AGCTTCCACCTTCTCTACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTGGAGACCCCTTGAATAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGACGCTTCCACGAGGGGTGAGATaGGGCTCGGGGAAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GLGGPSSLCPSHRSRKTLPRGVR*GSGKAV Trigger: CACTGCCTTCCCCGAGCCTCATCTCACCCCTCGTGG...AAGCGTCTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACCGGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGTCCAGCCTGGCCTTCTaGCTGTCACAGCCAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PTGLGGPSSLCPSHRSRKSSLAF*LSQPVL Trigger: CAGGACTGGCTGTGACAGCCAGAAGGCCAGGCTGGA...CTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | GATAAAGGGATCCTGGAGCCACTACAGGAGTTGGGCCCACCGGCCTaGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: DKGILEPLQELGPPA*VAPRAFAQVTVAGR Trigger: TCTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | TTCCGCTTTGAGTCCGATAAAGGGATCCTGGAGCCACTACAGGAGTaGGGCCCACCGGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FRFESDKGILEPLQE*GPPALVAPRAFAQV Trigger: GACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGACCAGTTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCCCACCAGCTCCTGCATaGCAGTGCCTGCCCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PETSWLSWAATSPSAKSSPPAPA*QCLPQH Trigger: ATGCTGGGGCAGGCACTGGCATGCAGGAGCTGGTGG...GGAAGACTTGGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAACTGGTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGACGCTTTCTGCTTCCAAAGGCTaGATGCTTTTACGCGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: GLGGPSSLCPSHRSRKTLSASKG*MLLRVR Trigger: GCGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGA...AAGCGTCTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCCGCTTTGAGTCCGATAAAGGGATCCTGGAGCCACTACAGGAGTTGGGCGGCCCCTCGAGCCTTTaGCCAAGTCACCGTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VFRFESDKGILEPLQELGGPSSL*PSHRSR Trigger: CCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCC...GCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTGTGATACAGACCACTAGCCAAGTGCATCAGCCTGGGTTAGGCTTAGCCTGCTACCACGAGGGGTaGGATGAGGCTCGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SCVIQTTSQVHQPGLGLACYHEG*DEARGR Trigger: CCTTCCCCGAGCCTCATCTCACCCCTCGTGGTAGCA...GGCTAAGCCTAACCCAGGCTGATGCACTTGGCTAGTGGTCTGTATCACACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGTGATACAGACCACTAGCCAAGTGCATCAGCCTGGGTTAGGCTTAGCCCTGCATGCCAGTGCCTaGCCCAGCATCTGCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: SCVIQTTSQVHQPGLGLALHASA*PSICPP Trigger: AGGTGGGCAGATGCTGGGGCAGGCACTGGCATGCAG...GGCTAAGCCTAACCCAGGCTGATGCACTTGGCTAGTGGTCTGTATCACACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACCTTAGGGGCAAGTGGGTGGTGGCTTTATTCCCAGCTATGTTTAGGGCCCGAGCTAGGGGGTCACTaGAGGGTCTCACGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CTLGASGWWLYSQLCLGPELGGH*RVSRCV Trigger: CACACAGCGTGAGACCCTCCAGTGACCCCCTAGCTC...GGGCCCTAAACATAGCTGGGAATAAAGCCACCACCCACTTGCCCCTAAGGTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | GCCATTGGCTATCGTGGAGGAATACGGGTCTCTGTGATGTCACAGTaGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCAT | + |
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Preference number: 2 (lower is better) Translates to: AIGYRGGIRVSVMSQ*LGSFLARYLAACAH Trigger: ATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACATCACAGAGACCCGTATTCCTCCACGATAGCCAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAATTGGATCTCAGTGCCTGAAGCTGGGAAAGACCCTGGAAGTGGCTGTGGGAAACAAGGAGACCAGTaGAGGGGTGGGGGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: MNWISVPEAGKDPGSGCGKQGDQ*RGGGAA Trigger: AGCTGCACCCCCACCCCTGCACTGGTCTCCTTGTTT...CCCACAGCCACTTCCAGGGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGTGATACAGACCACTAGCCAAGTGCATCAGCCTGGGTTAGGCTTAGCCACAGAAGGCTGCCCATaGAGGGAAGGGGCAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: SCVIQTTSQVHQPGLGLATEGCP*REGANP Trigger: GGGATTTGCCCCTTCCCTCCATGGGCAGCCTTCTGT...GGCTAAGCCTAACCCAGGCTGATGCACTTGGCTAGTGGTCTGTATCACACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | ACTGCTGAGCTCCAAGGTGTCTGGACACCCCACCCTCAACGTCCCTaGGTCCTGTTGCATATAAAGTACCGAGAGAGAGCATTCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TAELQGVWTPHPQRP*VLLHIKYRERAFLS Trigger: GGAAAGGAATGCTCTCTCTCGGTACTTTATATGCAACAGGACCAAGGGACGTTGAGGGTGGGGTGTCCAGACACCTTGGAGCTCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAACTGCTTCTAAATCCTGCAGGTCATGCGCTGGGACGGCTCCATGTTCCGAATACGGGTCTCTGTaGTGTCACAGTTGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VLTASKSCRSCAGTAPCSEYGSL*CHSCWA Trigger: TGCCCAGCAACTGTGACATCACAGAGACCCGTATTC...GGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGGGGACAGCGGGTGAATaGAAAGGTCTGGTGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: GAGVQKPKGQTAELQGVWGTAGE*KGLVIK Trigger: CTTTATCACCAGACCTTTCCATTCACCCGCTGTCCC...CCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTTGGTTTCTGTACCCCAGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGGAGCAGTGGAGATTAGAATGGGAATCAGGGATCACAGATACAAGAGTAACCTGCCCGCTCTGTaGGCTCAAGGCAGGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: QEGAVEIRMGIRDHRYKSNLPAL*AQGRSF Trigger: GAAGCTCCTGCCTTGAGCCCACAGAGCGGGCAGGTT...ACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACCTTAGGGGCAAGTGGGTGGTGGCTTTATTCCCAGCTATGTTTAGGGCCCCAGGAAAGAGGAGTCTaGAGGCGTCACAGAGATCAC | + |
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Preference number: 2 (lower is better) Translates to: CTLGASGWWLYSQLCLGPQERGV*RRHRDH Trigger: GTGATCTCTGTGACGCCTCCAGACTCCTCTTTCCTG...GGGCCCTAAACATAGCTGGGAATAAAGCCACCACCCACTTGCCCCTAAGGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACACCCCACCGGCCATTGGCTATCGTaGAGGAATACGGGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YRNQKGKLLSSKVSGHPTGHWLS*RNTGLC Trigger: ACAGAGACCCGTATTCCTCCACGATAGCCAATGGCC...GGTGGGGTGTCCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTTGGTTTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTCGTCACAGAGATCACTaGGTACCCCTTTCCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: EAGTQLGAGVQKPKGQTARHRDH*VPLSRM Trigger: CATTCTGGAAAGGGGTACCCAGTGATCTCTGTGACG...AGCAGTTTGCCCTTTTGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | GAAGCCACATTTTGGCTGAGGACAGATACTCCCATAGACAACGTCTaGGGTGTTGAGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EATFWLRTDTPIDNV*GVEAGTQLGAGVQK Trigger: TTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACACCCAAGACGTTGTCTATGGGAGTATCTGTCCTCAGCCAAAATGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGGAGCAGTGGAGATTAGAATGGGAATCAGGGATCACAGATACAAGAGTACCAGTTGGCTATCCTaGGCAGCGACTTCGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QEGAVEIRMGIRDHRYKSTSWLS*AATSPS Trigger: TGAAGGCGAAGTCGCTGCCCAGGATAGCCAACTGGT...ACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGGGAGCAGTGGAGATTAGAATGGGAATCAGGGATCACAGATACAAGAGTGCAGGAGCTTCTTGTTaGGTGGCAGGTGATGACTCT | + |
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Preference number: 2 (lower is better) Translates to: QEGAVEIRMGIRDHRYKSAGASC*VAGDDS Trigger: AGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGC...ACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGGGAGCAGTGGAGATTAGAATGGGAATCAGGGATCACAGATACAAGAGTATTCTGTGTGACCTGTaGGGCAGAGAGGAAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QEGAVEIRMGIRDHRYKSILCDL*GREEGL Trigger: TAGACCTTCCTCTCTGCCTCACAGGTCACACAGAAT...ACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CAA 90 bp | AGCCAACATGACCTGCTCCAAGATTCTGAATTTACTCTGCTAAGCTaGGCCCTGTCTTTAGAACATTCCAGGATGTTAACTCCATCTACA | + |
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Preference number: 2 (lower is better) Translates to: SQHDLLQDSEFTLLS*ALSLEHSRMLTPST Trigger: TGTAGATGGAGTTAACATCCTGGAATGTTCTAAAGACAGGGCCAAGCTTAGCAGAGTAAATTCAGAATCTTGGAGCAGGTCATGTTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR GCA 72 bp | CATGCCAGTGCCTGCCCCAGCATCTGCCCACCTCCCTaGCGCCCGCAGCCTCACTCCAAGCTCCACACAGAG | + |
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Preference number: 3 (lower is better) Translates to: HASACPSICPPP*RPQPHSKLHTE Trigger: CTCTGTGTGGAGCTTGGAGTGAGGCTGCGGGCGGCAGGGAGGTGGGCAGATGCTGGGGCAGGCACTGGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
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| 3UTR CCA 72 bp | AGTCCGATAAAGGGATCCTGGAGCCACTACAGGAGTTaGGCCCACCGGCCTTGGTGGCCCCTCGAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPIKGSWSHYRS*AHRPWWPLEPL Trigger: CAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | GTTGGGCCCACCGGCCTTGGTGGCCCCTCGAGCCTTTaGCCAAGTCACCGTAGCAGGAAGACGCTTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: VGPTGLGGPSSL*PSHRSRKTLSI Trigger: AATAGAAAGCGTCTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | TGCCCGCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTaGGTGGCAGGTGATGACTCTGGATGGGATCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPLCGLKAGASC*VAGDDSGWDPG Trigger: TCCAGGATCCCATCCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | CAGCCTGGCCTTCTGGCTGTCACAGCCAGTCCTGTGTaGTACAGACCACTAGCCAAGTGCATCAGCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QPGLLAVTASPV*YRPLAKCISLG Trigger: ACCCAGGCTGATGCACTTGGCTAGTGGTCTGTATCACACAGGACTGGCTGTGACAGCCAGAAGGCCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | ACAGGCGGGCTCCAGGTTCTAACTGCTTCTAAATCCTaGAGGTCATGCGCTGGGACGGCTCCATGTTCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: TGGLQVLTASKS*RSCAGTAPCSD Trigger: GTCGGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAACCTGGAGCCCGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | GAGGGAAGGGGCAAATCCCATGCCCACCATAGGGCATaGTGTGCAGGTCTAAGCGAGATTCAGCCACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EGRGKSHAHHRA*CAGLSEIQPPA Trigger: AGCTGGTGGCTGAATCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | TGTCACAGAGGCCTGTCATCTCAGCACCAGGGAGGCTaGGGCAGAAAGATCAGTCAGTGCCAGGCTAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CHRGLSSQHQGG*GRKISQCQASK Trigger: CTTGCTAGCCTGGCACTGACTGATCTTTCTGCCTCAGCCTCCCTGGTGCTGAGATGACAGGCCTCTGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | GTCACCGTAGCAGGAAGACGCTTTCTATTCGCAGCGTaGTTCAAGGGCCCCACGCAGATCTACCAGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VTVAGRRFLFAA*FKGPTQIYQHH Trigger: ATGGTGCTGGTAGATCTGCGTGGGGCCCTTGAAGCACGCTGCGAATAGAAAGCGTCTTCCTGCTACGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | TGGCCATTGGCTATCGTGGAGGAATACGGGTCTCTGTaGTGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: WPLAIVEEYGSL*CHSCWAVSWPG Trigger: ACCGGGCCAAGAAACTGCCCAGCAACTGTGACATCACAGAGACCCGTATTCCTCCACGATAGCCAATGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | GTGCTTCAAGGGCCCCACGCAGATCTACCAGCACCATaGATTGGATCTCAGTGCCTGAAGCTGGGAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: VLQGPHADLPAP*IGSQCLKLGKT Trigger: GGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTGAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | TTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATGTCTaGTTCCAAAGGCTGAATGCTTTTACGCGTGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLARYLAACAHV*FQRLNAFTRAQ Trigger: CTGCGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | ACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTaGCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TVAGQFLGPVLS*LCACLLPKAEC Trigger: GCATTCAGCCTTTGGAAGCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | AAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTaGACACCCCACCCTCAACGTCCCTTGGTCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KPKGQTAELQGV*TPHPQRPLVLL Trigger: CAACAGGACCAAGGGACGTTGAGGGTGGGGTGTCCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | GGGGTATTCTGGGATATCTGGGTAACCTCTCCAGCCTaGCCTTCTGGCTGTCACAGCCAGTCCTGTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: GVFWDIWVTSPA*PSGCHSQSCVI Trigger: TATCACACAGGACTGGCTGTGACAGCCAGAAGGCCAGGCTGGAGAGGTTACCCAGATATCCCAGAATACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | TCAAGGGCCCCACGCAGATCTACCAGCACCATGAATTaGATCTCAGTGCCTGAAGCTGGGAAAGACCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SRAPRRSTSTMN*ISVPEAGKDPG Trigger: TCCAGGGTCTTTCCCAGCTTCAGGCACTGAGATCCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | GTCCTGGGAAATTACAGGTCTTACAGGGACAGCGGGTaGATGGAAAGGTCTGGTGATAAAGTGGGGGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGNYRSYRDSG*MERSGDKVGAA Trigger: AGCGGCCCCCACTTTATCACCAGACCTTTCCATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | CTCCAGGTTCTAACTGCTTCTAAATCCTGCAGGTCATaGGCTGGGACGGCTCCATGTTCCGACTGTTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQVLTASKSCRS*AGTAPCSDCYS Trigger: GCTGTAACAGTCGGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAACCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | GGGACAGCGGGTGAATGGAAAGGTCTGGTGATAAAGTaGGGGCCGCTCAACATAAACAAGGAGACCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GTAGEWKGLVIK*GPLNINKETSA Trigger: TGCACTGGTCTCCTTGTTTATGTTGAGCGGCCCCCACTTTATCACCAGACCTTTCCATTCACCCGCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | GGATACAAAGGAGTCTCAAGAGAGCTAGGGGGTCACTaGAGGGTCTCACGCTGTGTGGCCACTGTAGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GYKGVSRELGGH*RVSRCVATVEY Trigger: ATACTCTACAGTGGCCACACAGCGTGAGACCCTCCAGTGACCCCCTAGCTCTCTTGAGACTCCTTTGTATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTAACTGCTTCTAAATCCTGCAGGTCATGCGCTGGGACGGCTCCATGTTCCTCTGTGATGTCACAGTaGCTGGGCAGTTTCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLTASKSCRSCAGTAPCSSVMSQ*LGSFLA Trigger: GGCCAAGAAACTGCCCAGCAACTGTGACATCACAGA...GGAACATGGAGCCGTCCCAGCGCATGACCTGCAGGATTTAGAAGCAGTTAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | GAGGACAGATACTCCCATAGACAACGTCTTGGGTGTTaGGGCTGGTACACAGCTTGGAGCTGGGGTACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EDRYSHRQRLGC*GWYTAWSWGTE Trigger: TTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACACCCAAGACGTTGTCTATGGGAGTATCTGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | TGGGAAATTACAGGTCTTACAGGGACAGCGGGTGAATaGAAAGGTCTGGTGATAAAGTGGGGGCCGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: WEITGLTGTAGE*KGLVIKWGPLN Trigger: GTTGAGCGGCCCCCACTTTATCACCAGACCTTTCCATTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | ACGCTGTGTGGCCACTGTAGAGTATCAGTGGTGTCCTaGGAAATTACAGGTCTTACAGGGACAGCGGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLCGHCRVSVVS*EITGLTGTAGE Trigger: TTCACCCGCTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTGATACTCTACAGTGGCCACACAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | AGGGTCTCACGCTGTGTGGCCACTGTAGAGTATCAGTaGTGTCCTGGGAAATTACAGGTCTTACAGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RVSRCVATVEYQ*CPGKLQVLQGQ Trigger: CTGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTGATACTCTACAGTGGCCACACAGCGTGAGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | CCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTaGCCATTGGCTATCGTGGAGGAATACGGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRESIPFHLNPI*PLAIVEEYGSL Trigger: CAGAGACCCGTATTCCTCCACGATAGCCAATGGCCAGATTGGGTTTAAGTGGAAAGGAATGCTCTCTCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGGGAGCAGTGGAGATTAGAATGGGAATCAGGGATCACAGATACAAGAGTACAACGTCTTGGGTGTaGAGGCTGGTACACAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QEGAVEIRMGIRDHRYKSTTSWV*RLVHSL Trigger: CAAGCTGTGTACCAGCCTCAACACCCAAGACGTTGT...ACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | GCTTTATTCCCAGCTATGTTTAGGGCCCCTCCAGTCTaGAGCCACATTTTGGCTGAGGACAGATACTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALFPAMFRAPPV*SHILAEDRYSH Trigger: ATGGGAGTATCTGTCCTCAGCCAAAATGTGGCTTCAGACTGGAGGGGCCCTAAACATAGCTGGGAATAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR GCA 72 bp | GCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTaGGCAGTAAAAGTGAAGCAGGAAAGAGGAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ACLLPKAECFYA*AVKVKQERGVW Trigger: CCAGACTCCTCTTTCCTGCTTCACTTTTACTGCGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | CTATGTTTAGGGCCCCTCCAGTCTGAAGCCACATTTTaGCTGAGGACAGATACTCCCATAGACAACGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LCLGPLQSEATF*LRTDTPIDNVL Trigger: CAAGACGTTGTCTATGGGAGTATCTGTCCTCAGCCAAAATGTGGCTTCAGACTGGAGGGGCCCTAAACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | CAAGGGGTCTCCAGGAGGGAGCAGTGGAGATTAGAATaGGAATCAGGGATCACAGATACAAGAGTAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGVSRREQWRLE*ESGITDTRVEK Trigger: CTTCTCTACTCTTGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTGGAGACCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR TCA 72 bp | AAGGCTCTCAAAAAGGGAGAGGGGCTACGGGTAAACTaGGAACCTATAAGCTCTCGTTCACAATCCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KALKKGEGLRVN*EPISSRSQSTR Trigger: TCTGGTGGATTGTGAACGAGAGCTTATAGGTTCTCAGTTTACCCGTAGCCCCTCTCCCTTTTTGAGAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | AGAGTAGAGAAGGTGGAAGCTGGGTCAGGGTGTAGCTaGAGCATATGGGATAAACACATAACGTATGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVEKVEAGSGCS*SIWDKHITYDC Trigger: GCAGTCATACGTTATGTGTTTATCCCATATGCTCCAGCTACACCCTGACCCAGCTTCCACCTTCTCTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CCA 72 bp | AACTCAGTTATTCAAGGGGTCTCCAGGAGGGAGCAGTaGAGATTAGAATGGGAATCAGGGATCACAGATACA | + |
|
Preference number: 3 (lower is better) Translates to: NSVIQGVSRREQ*RLEWESGITDT Trigger: TGTATCTGTGATCCCTGATTCCCATTCTAATCTCCACTGCTCCCTCCTGGAGACCCCTTGAATAACTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | ATCCTGGAGCCACTACAGGAGTTGGGCCCACCGGCCTaGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILEPLQELGPPA*VAPRAFAQVTV Trigger: TACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGACGCTTAGGTGGCCCTTCTCCTaGGCGGTGACTGGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGGPSSLCPSHRSRKTLRWPFS*AVTGFL Trigger: CAGAAACCCAGTCACCGCCCAGGAGAAGGGCCACCT...AAGCGTCTTCCTGCTACGGTGACTTGGGCAAAGGCTCGAGGGGCCACCAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | GAGTCCGATAAAGGGATCCTGGAGCCACTACAGGAGTaGGGCCCACCGGCCTTGGTGGCCCCTCGAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESDKGILEPLQE*GPPALVAPRAF Trigger: AAAGGCTCGAGGGGCCACCAAGGCCGGTGGGCCCAACTCCTGTAGTGGCTCCAGGATCCCTTTATCGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGGGAGGAGAACAGCCAGCTCGGAGTTCAAGCCCACCTTCAGAGCCAGGCCTTCTCCTGGGCGGTaGCTGGGTTTCTGTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QEGRRTASSEFKPTFRARPSPGR*LGFCLN Trigger: GTTCAGACAGAAACCCAGTCACCGCCCAGGAGAAGG...CCTGGCTCTGAAGGTGGGCTTGAACTCCGAGCTGGCTGTTCTCCTCCCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAACAGCCAGCTCGGAGTTCAAGCCCACCTTCAGAGCCAGGACCTGTGCTCAGGTGGCCCTTCTCCTaGGCGGTGACTGGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEQPARSSSPPSEPGPVLRWPFS*AVTGFL Trigger: CAGAAACCCAGTCACCGCCCAGGAGAAGGGCCACCT...GAGCACAGGTCCTGGCTCTGAAGGTGGGCTTGAACTCCGAGCTGGCTGTTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGTGTCAGGAGGGGAGGAGAACAGCCAGCTCGGAGTTCAAGCCCACCTTTGGTGTGATGAGAGGTaGCCCTTCTCCTGGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAVSGGEENSQLGVQAHLWCDER*PFSWAV Trigger: CACCGCCCAGGAGAAGGGCCACCTCTCATCACACCA...AAGGTGGGCTTGAACTCCGAGCTGGCTGTTCTCCTCCCCTCCTGACACTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGTTCAAGCCCACCTTCAGAGCCAGGACCTGTGCTCTTTTAACTGGTCCTGGTGTGATGAGAGGTaGCCCTTCTCCTGGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVQAHLQSQDLCSFNWSWCDER*PFSWAV Trigger: CACCGCCCAGGAGAAGGGCCACCTCTCATCACACCA...GGACCAGTTAAAAGAGCACAGGTCCTGGCTCTGAAGGTGGGCTTGAACTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | CGGGTCTCTGTGATGTCACAGTTGCTGGGCAGTTTCTaGGCCCGGTACTTAGCTGCCTGTGCGCATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSVMSQLLGSF*ARYLAACAHVC Trigger: GCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACATCACAGAGACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | TGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTaGAGTCCGATAAAGGGATCCTGGAGCCACTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAATSPSAKSSA*SPIKGSWSHYR Trigger: CCTGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGAAGACTTGGCTGAAGGCGAAGTCGCTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCAAGCCCACCTTCAGAGCCAGGACCTGTGCTCTTTTAACTGGTCCATCCCTTCTCCTGGGCGGTaGCTGGGTTTCTGTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVQAHLQSQDLCSFNWSIPSPGR*LGFCLN Trigger: GTTCAGACAGAAACCCAGTCACCGCCCAGGAGAAGG...GATGGACCAGTTAAAAGAGCACAGGTCCTGGCTCTGAAGGTGGGCTTGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | TATCGTGGAGGAATACGGGTCTCTGTGATGTCACAGTaGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRGGIRVSVMSQ*LGSFLARYLAA Trigger: GGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACATCACAGAGACCCGTATTCCTCCACGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | TTTTGGCTGAGGACAGATACTCCCATAGACAACGTCTaGGGTGTTGAGGCTGGTACACAGCTTGGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FWLRTDTPIDNV*GVEAGTQLGAG Trigger: CCCAGCTCCAAGCTGTGTACCAGCCTCAACACCCAAGACGTTGTCTATGGGAGTATCTGTCCTCAGCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | TTAGGGCTCCTTTTCACTCCCAGAAGTGTCCCTAGTTaGCCACTAGAACTTAAGTGGCACAGAAGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLLFTPRSVPS*PLELKWHRRLP Trigger: GGGCAGCCTTCTGTGCCACTTAAGTTCTAGTGGCAAACTAGGGACACTTCTGGGAGTGAAAAGGAGCCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| 3UTR CAA 72 bp | GACCTGCTCCAAGATTCTGAATTTACTCTGCTAAGCTaGGCCCTGTCTTTAGAACATTCCAGGATGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: DLLQDSEFTLLS*ALSLEHSRMLT Trigger: AGTTAACATCCTGGAATGTTCTAAAGACAGGGCCAAGCTTAGCAGAGTAAATTCAGAATCTTGGAGCAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACCAGTTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCTTATTTTCAGGGTCATaGGCATCCAAAGTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PETSWLSWAATSPSAKSSLFSGS*ASKVGR Trigger: CCTGCCTACTTTGGATGCCAATGACCCTGAAAATAA...GGAAGACTTGGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAACTGGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTCAGGAGGGGAGGAGAACAGCCAGCTCGGAGTTCAAGCCCACCTTCAGAGTGTCTGAACTTGCATTaGCATTTGCCACTCATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVRRGGEQPARSSSPPSECLNLH*HLPLIR Trigger: CCTTATGAGTGGCAAATGCAAATGCAAGTTCAGACA...CTCTGAAGGTGGGCTTGAACTCCGAGCTGGCTGTTCTCCTCCCCTCCTGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167369.8 |
||
| CDS TCA 72 bp | CCTGGTGTGATGAGAGGTGGCCCTTCTCCTGGGCGGTaGCTGGGTTTCTGTCTGAACTTGCATTTGCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGVMRGGPSPGR*LGFCLNLHLHL Trigger: CAAATGCAAATGCAAGTTCAGACAGAAACCCAGTCACCGCCCAGGAGAAGGGCCACCTCTCATCACACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072331.13 ENSMUST00000167369.8 |
||