Pregenerated sensors for FXYD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036570Ensembl transcript IDs: ENSMUST00000039909.13, ENSMUST00000071697.11, ENSMUST00000108110.5, ENSMUST00000205439.2, ENSMUST00000205778.2, ENSMUST00000205807.2, ENSMUST00000206012.2, ENSMUST00000206030.2, ENSMUST00000206305.2, ENSMUST00000206328.2, ENSMUST00000206474.2, ENSMUST00000206860.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGGTGCTAAGGGGGCTCTaGCTGAGTTTCCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RERWGWSQASIWVGRGVRVLRGL*LSFLES Trigger: TGACTCCAGGAAACTCAGCCAGAGCCCCCTTAGCAC...CCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGTGCTAAGGGGGCTCTaGCTGAGTTTCCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: AGNAGGGHRRASGWGEVSVLRGL*LSFLES Trigger: TGACTCCAGGAAACTCAGCCAGAGCCCCCTTAGCAC...TGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCCGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGGTGCTAAGGGGGCTCTaGCTGAGTTTCCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GVRKAGLMQGTLGVVTGEVLRGL*LSFLES Trigger: TGACTCCAGGAAACTCAGCCAGAGCCCCCTTAGCAC...CTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000039909.13 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCCGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGTCACAGGCGAGCATCTaGCTGAGTTTCCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GVRKAGLMQGTLGVVTGESQASI*LSFLES Trigger: TGACTCCAGGAAACTCAGCCAGATGCTCGCCTGTGA...CTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTATCAACTGCAGAACCTaGCTGAGTTTCCTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MQGTLGVVTGEHLGGERCINCRT*LSFLES Trigger: TGACTCCAGGAAACTCAGCCAGGTTCTGCAGTTGAT...ACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205807.2 ENSMUST00000206474.2 |
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| 3UTR CCA 72 bp | GGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTaGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: GNAGGGHRRASG*GEVSGAKGALR Trigger: CCGCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000205807.2 ENSMUST00000206474.2 |
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| 3UTR CCA 72 bp | GGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTaGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GNAGGGHRRASG*GEVSGAKGALA Trigger: AGCCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| 3UTR TCA 72 bp | AGGTCTGAGCAGCAAGGGGTGTCCGAAAGGCAGGGCTaGTGCAGGGAACGCTGGGGGTGGTCACAGGCGAGC | + |
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Preference number: 3 (lower is better) Translates to: RSEQQGVSERQG*CRERWGWSQAS Trigger: GCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACCCCTTGCTGCTCAGACCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLMQGTLGVVTGEHLGGEFLWSF*TGHGEE Trigger: CTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAA...CTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CRERWGWSQASIWVGRGVDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...GACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RADAGNAGGGHRRASGWGDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...TCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | CTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LMQGTLGVVTGEHLGGERDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GVVTGEHLGGERCQVLRGDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | AGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERWGWSQASIWVGRGVRDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GNAGGGHRRASGWGEVSGDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...ACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AGLMQGTLGVVTGEHLGGMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...CCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GLMQGTLGVVTGEHLGGEMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...CTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGATTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RADAGNAGGGHRRASGWGFLWSF*TGHGEE Trigger: CTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAA...TCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GNAGGGHRRASGWGEVSGFLWSF*TGHGEE Trigger: CTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAA...ACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: AGGGHRRASGWGEVSGAKDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KGRADAGNAGGGHRRASGDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | CTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LMQGTLGVVTGEHLGGERMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...CCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: CRERWGWSQASIWVGRGVMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...GACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGHRRASGWGEVSGAKGAFLWSF*TGHGEE Trigger: CTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAA...AGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGCTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KGRADAGNAGGGHRRASGFLWSF*TGHGEE Trigger: CTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAA...GCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| CDS-3UTR GCA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGCTGAGTTTGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GLMQGTLGVVTGEHLAEFDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...AAACTCAGCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| CDS-3UTR CCA 90 bp | CTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGCTTCTGCACTGGCCATaGAGAGGAGACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: LMQGTLGVVTGEHLGGERLLHWP*RGDTHT Trigger: TGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAG...CCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | CAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGCTTCTGCACTGGCCATaGAGAGGAGACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: QGTLGVVTGEHLGGERCQLLHWP*RGDTHT Trigger: TGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAG...CTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGCTGAGCTTCTGCACTGGCCATaGAGAGGAGACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: AGLMQGTLGVVTGEHLAELLHWP*RGDTHT Trigger: TGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAG...CTCAGCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGCTTCTGCACTGGCCATaGAGAGGAGACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: GGGHRRASGWGEVSGAKGLLHWP*RGDTHT Trigger: TGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAG...CCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GGHRRASGWGEVSGAKGAMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...AGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KAGLMQGTLGVVTGEHLGMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...ACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | CGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: RKAGLMQGTLGVVTGEHLMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...CAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | ACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TLGVVTGEHLGGERCQVLMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...TAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR GCA 90 bp | GGGGGTGAAAAGAGTAAGTGGCAAGCTCTCGCCACTATCCCACCCTGGCACTGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGEKSKWQALATIPPWHWDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCAGTGCCAGGGTGGGATAGTGGCGAGAGCTTGCCACTTACTCTTTTCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205807.2 ENSMUST00000206474.2 |
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| CDS-3UTR CCA 90 bp | GCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGGCTGAGTTTCCTATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ASGWGEVSGAKGALAEFPMTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCAT...AGGAAACTCAGCCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLMQGTLGVVTGEHLGGEFSAVG*ICIDIS Trigger: AGAGATGTCGATGCAAATTCAACCAACAGCAGAGAA...CTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGGCTGAGTTTCCTGGACTTCTGCACTGGCCATaGAGAGGAGACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: SGWGEVSGAKGALAEFPGLLHWP*RGDTHT Trigger: TGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAG...TCCAGGAAACTCAGCCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| CDS-3UTR TCA 90 bp | GGTGTCCGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRKAGLMQGTLGVVTGEFSAVG*ICIDIS Trigger: AGAGATGTCGATGCAAATTCAACCAACAGCAGAGAA...CTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR TCA 90 bp | TGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCT | + |
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Preference number: 4 (lower is better) Translates to: CRERWGWSQASIWVGRGVFSAVG*ICIDIS Trigger: AGAGATGTCGATGCAAATTCAACCAACAGCAGAGAA...GACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR TCA 90 bp | GGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHRRASGWGEVSGAKGALFSAVG*ICIDIS Trigger: AGAGATGTCGATGCAAATTCAACCAACAGCAGAGAA...CAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGCTTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLMQGTLGVVTGEHLAFSAVG*ICIDIS Trigger: AGAGATGTCGATGCAAATTCAACCAACAGCAGAGAA...AGCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| CDS GCA 90 bp | GGTGGAGGTTCTACCGCCTGCGGGATGACAGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGSTACGMTDGGWS*GKFPPLRRVPQFSA Trigger: AGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS GCA 90 bp | GGGCTCTGGCTGAGTTTCCTGGAGTCAGGTGGAGGTTCTACCGCCTaGGGGATGACAGACGGCGGATGGAGCTGCGGAAAGTTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GLWLSFLESGGGSTA*GMTDGGWSCGKFPP Trigger: AGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACCTGACTCCAGGAAACTCAGCCAGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 90 bp | GAGTCAGGTGGAGGTTCTACCGCCTGCGGGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESGGGSTACGMTDGG*SCGKFPPLRRVPQF Trigger: GAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACCTGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
|
Preference number: 5 (lower is better) Translates to: GLMQGTLGVVTGEHLGGEPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...CTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLMQGTLGVVTGEHLGGEVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRADAGNAGGGHRRASGWVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RERWGWSQASIWVGRGVRPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...CCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
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Preference number: 5 (lower is better) Translates to: GGGHRRASGWGEVSGAKGPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...CCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
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Preference number: 5 (lower is better) Translates to: RADAGNAGGGHRRASGWGVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...TCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
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Preference number: 5 (lower is better) Translates to: RERWGWSQASIWVGRGVRVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCCGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
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Preference number: 5 (lower is better) Translates to: GVRKAGLMQGTLGVVTGEVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLGVVTGEHLGGERCQVVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
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Preference number: 5 (lower is better) Translates to: KAGLMQGTLGVVTGEHLGPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...ACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
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Preference number: 5 (lower is better) Translates to: AGGGHRRASGWGEVSGAKPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...CTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGHRRASGWGEVSGAKGAPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...AGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | ACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTACCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLGVVTGEHLGGERCQVLPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...TAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS CCA 90 bp | GATCCGCAGGGTGTGGTAATCGTAGGTGAATGGATCCGGTTCCTGTaGAGCTTCTGCACTGGCCATGGAGAGGAGACACACACACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPQGVVIVGEWIRFL*SFCTGHGEETHTQS Trigger: GCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGATTACCACACCCTGCGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTTTGCATCGACATCTCTaGCTAAGGATGATAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GNAGGGHRRASGWGEVSGLHRHL*LRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAA...ACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTTGCATCGACATCTCTaGCTAAGGATGATAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DAGNAGGGHRRASGWGEVLHRHL*LRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAA...CACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCCGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGTTGCATCGACATCTCTaGCTAAGGATGATAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GVRKAGLMQGTLGVVTGELHRHL*LRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAA...CTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCGGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000039909.13 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: NAGGGHRRASGWGEVSGAVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...AGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGGCTGAGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRASGWGEVSGAKGALAEVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CTCAGCCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGGGTGGTCACAGGCGAGCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGGGHRRASGWGEVSGAKVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CTTAGCACCTGACACCTCTCCCCACCCAGATGCTCGCCTGTGACCACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGGTTCTCTGCTGTTGGTaGAATTTGCATCGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGRADAGNAGGGHRRASGVLCCW*NLHRHL Trigger: GAGATGTCGATGCAAATTCAACCAACAGCAGAGAAC...CCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206030.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGCTGAGTTTCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
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Preference number: 5 (lower is better) Translates to: GLMQGTLGVVTGEHLAEFPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...AAACTCAGCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205778.2 |
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| CDS GCA 90 bp | GGTGTGGTAATCGTAGGTGAATGGATCCGGTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAGACACACACACAGAGCCAGGATGTG | + |
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Preference number: 5 (lower is better) Translates to: GVVIVGEWIRFLWSF*TGHGEETHTQSQDV Trigger: CACATCCTGGCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGATTACCACACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS GCA 90 bp | ACATCTCTTGCCGTAGGTGAATGGATCCGGTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAGACACACACACAGAGCCAGGATGTG | + |
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Preference number: 5 (lower is better) Translates to: TSLAVGEWIRFLWSF*TGHGEETHTQSQDV Trigger: CACATCCTGGCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGGCAAGAGATGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205807.2 |
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| CDS-3UTR CAA 90 bp | CGAAAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGTTGCATCGACATCTCTaGCTAAGGATGATAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RKAGLMQGTLGVVTGEHLLHRHL*LRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAA...CAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAGGGCTGATGCAGGGAACGCTGGGGGTGGTCACAGGCGAGCATCTGGGTTTGCATCGACATCTCTaGCTAAGGATGATAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: KAGLMQGTLGVVTGEHLGLHRHL*LRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAA...ACCCAGATGCTCGCCTGTGACCACCCCCAGCGTTCCCTGCATCAGCCCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS-3UTR CAA 90 bp | GCATCTGGGTGGGGAGAGGTGTCAGGTGCTAAGGGGGCTCTGGCTGAGTTTCCTCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACA | + |
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Preference number: 5 (lower is better) Translates to: ASGWGEVSGAKGALAEFPPSSLL*VEFAST Trigger: TGTCGATGCAAATTCAACCAACAGCAGAGAACTGGG...AGGAAACTCAGCCAGAGCCCCCTTAGCACCTGACACCTCTCCCCACCCAGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206860.2 |
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| CDS GCA 90 bp | GAGCTGCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTaGTGTTGGTTGAATTTGCATCGACATCTCTTGCCTGTGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: ELRKVPSSSSGSPVL*CWLNLHRHLLPVEW Trigger: CCACTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 90 bp | CGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTaGTTGAATTTGCATCGACATCTCTTGCCTGTGGAGTGGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RKVPSSSSGSPVLCC*LNLHRHLLPVEWEG Trigger: ACCCTCCCACTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 90 bp | TTTGCATCGACATCTCTTGCCGTAGGTGAATGGATCCGGTTCCTGTaGAGCTTCTGCACTGGCCATGGAGAGGAGACACACACACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: FASTSLAVGEWIRFL*SFCTGHGEETHTQS Trigger: GCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGGCAAGAGATGTCGATGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205807.2 |
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| CDS GCA 90 bp | GAGCTGCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTaGTGTTGGTTGAATTTGCATCGACATCTCTTGCTAAGGATGATA | + |
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Preference number: 5 (lower is better) Translates to: ELRKVPSSSSGSPVL*CWLNLHRHLLLRMI Trigger: TATCATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS CCA 90 bp | CGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTaGTTGAATTTGCATCGACATCTCTTGCTAAGGATGATAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RKVPSSSSGSPVLCC*LNLHRHLLLRMIRM Trigger: CATCCTTATCATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS GCA 72 bp | TCTACCGCCTGCGGGATGACAGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: STACGMTDGGWS*GKFPPLRRVPQ Trigger: CTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 72 bp | GCTAAGGGGGCTCTGGCTGAGTTTCCTGGAGTCAGGTaGAGGTTCTACCGCCTGCGGGATGACAGACGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AKGALAEFPGVR*RFYRLRDDRRR Trigger: CCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACCTGACTCCAGGAAACTCAGCCAGAGCCCCCTTAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS TCA 72 bp | TCCTGGAGTCAGGTGGAGGTTCTACCGCCTGCGGGATaGCAGACGGCGGATGGAGCTGCGGAAAGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SWSQVEVLPPAG*QTADGAAESSL Trigger: GAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACCTGACTCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 72 bp | GGAGGTTCTACCGCCTGCGGGATGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCTCCTCTTCGTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GGSTACGMTDGG*SCGKFPPLRRV Trigger: AACCCGACGAAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS GCA 72 bp | CTGAGTTTCCTGGAGTCAGGTGGAGGTTCTACCGCCTaGGGGATGACAGACGGCGGATGGAGCTGCGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSFLESGGGSTA*GMTDGGWSCGK Trigger: CTTTCCGCAGCTCCATCCGCCGTCTGTCATCCCGCAGGCGGTAGAACCTCCACCTGACTCCAGGAAACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS GCA 72 bp | GCCGTAGGTGAATGGATCCGGTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAGACACACACACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AVGEWIRFLWSF*TGHGEETHTQS Trigger: GCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205807.2 |
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| CDS CCA 72 bp | ATGGATCCGGTTCCTGTGGAGCTTCTGCACTGGCCATaGAGAGGAGACACACACACAGAGCCAGGATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: MDPVPVELLHWP*RGDTHTEPGCG Trigger: GCCACATCCTGGCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000205807.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS CAA 90 bp | GCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACATCTCTTGCCTGTGGAGTGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: AESSLLFVGFPSSLL*VEFASTSLACGVGG Trigger: CCCTCCCACTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS GCA 72 bp | ATCGTAGGTGAATGGATCCGGTTCCTGTGGAGCTTCTaGACTGGCCATGGAGAGGAGACACACACACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: IVGEWIRFLWSF*TGHGEETHTQS Trigger: GCTCTGTGTGTGTGTCTCCTCTCCATGGCCAGTGCAGAAGCTCCACAGGAACCGGATCCATTCACCTACGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS TCA 72 bp | CCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTGGTTaGATTTGCATCGACATCTCTTGCCTGTGGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PLRRVPQFSAVG*ICIDISCLWSG Trigger: CCCACTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CCA 72 bp | CCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTaGTTGAATTTGCATCGACATCTCTTGCCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSGSPVLCC*LNLHRHLLPVE Trigger: CTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CAA 72 bp | TCGTCGGGTTCCCCAGTTCTCTGCTGTTGGTTGAATTaGCATCGACATCTCTTGCCTGTGGAGTGGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSGSPVLCCWLN*HRHLLPVEWEG Trigger: ACCCTCCCACTCCACAGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CAA 90 bp | GCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACATCTCTTGCCGTAGGTGAATGGATC | + |
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Preference number: 6 (lower is better) Translates to: AESSLLFVGFPSSLL*VEFASTSLAVGEWI Trigger: GATCCATTCACCTACGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205807.2 |
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| CDS GCA 72 bp | AAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTaGTGTTGGTTGAATTTGCATCGACATCTCTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: KVPSSSSGSPVL*CWLNLHRHLLP Trigger: CGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205807.2 |
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| CDS CCA 72 bp | CCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTaGTTGAATTTGCATCGACATCTCTTGCTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSGSPVLCC*LNLHRHLLLRM Trigger: CATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS CAA 90 bp | CCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTTGGTTGAATTaGCATCGACATCTCTTGCTAAGGATGATAAGGATGCCCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSGSPVLCCWLN*HRHLLLRMIRMPKM Trigger: CATCTTGGGCATCCTTATCATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS GCA 72 bp | AAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTaGTGTTGGTTGAATTTGCATCGACATCTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KVPSSSSGSPVL*CWLNLHRHLLP Trigger: AGGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206030.2 |
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| CDS CAA 90 bp | GGTTCCCCAGTTCTCTGCTGTTGGTTGAATTTGCATCGACATCTCTaGCTAAGGATGATAAGGATGCCCAAGATGAAGAGGATCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GSPVLCCWLNLHRHL*LRMIRMPKMKRIPA Trigger: CGCTGGGATCCTCTTCATCTTGGGCATCCTTATCATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS CAA 90 bp | GCGGAAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTGCTGTaGGTTGAATTTGCATCGACATCTCTTGCTAAGGATGATAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: AESSLLFVGFPSSLL*VEFASTSLAKDDKD Trigger: ATCCTTATCATCCTTAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTTCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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| CDS GCA 72 bp | AAAGTTCCCTCCTCTTCGTCGGGTTCCCCAGTTCTCTaGTGTTGGTTGAATTTGCATCGACATCTCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: KVPSSSSGSPVL*CWLNLHRHLLL Trigger: TAGCAAGAGATGTCGATGCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000039909.13 ENSMUST00000071697.11 ENSMUST00000108110.5 ENSMUST00000205439.2 ENSMUST00000205778.2 ENSMUST00000206012.2 ENSMUST00000206305.2 ENSMUST00000206328.2 ENSMUST00000206474.2 ENSMUST00000206860.2 |
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