Pregenerated sensors for FXR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018765Ensembl transcript IDs: ENSMUST00000018909.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGCCAGCGCAGGTCAGTTaGACCCATGAGGGCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: PHASHPRIPSLSPSSTVMPAQVS*THEGHG Trigger: ACCATGGCCCTCATGGGTCCAACTGACCTGCGCTGG...CATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR TCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACGGTCAGTTGGACCCATaGGGGCCATGGTGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDGQLDP*GPWWWA Trigger: TGCCCACCACCATGGCCCTCATGGGTCCAACTGACC...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAAACCCTGGGGGTAGGGTaGACAAGAGGGAGGGGTATG | + |
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Preference number: 2 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKTLGVG*TRGRGM Trigger: CATACCCCTCCCTCTTGTCCACCCTACCCCCAGGGT...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR TCA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCAAGGCACATCCAGTCTaGAAGGGAAGGGGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TPSHPPDKVISSQLPWETKAHPV*KGRGGS Trigger: GGAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTT...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR GCA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCCCAAAACCTTCCCCATaGCTCCCACCCACGAATACC | + |
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Preference number: 2 (lower is better) Translates to: TPSHPPDKVISSQLPWETPKPSP*LPPTNT Trigger: GGTATTCGTGGGTGGGAGGCATGGGGAAGGTTTTGG...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR CCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACACTGTCAAATCTGGGTaGGTCAAGGAGCACCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDTVKSG*VKEHPH Trigger: GTGGGGGTGCTCCTTGACCCACCCAGATTTGACAGT...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR-3UTR CCA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCCTGAACTGTCAAATCTaGGTGGGTCAAGGAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: TPSHPPDKVISSQLPWETLNCQI*VGQGAP Trigger: GGGTGCTCCTTGACCCACCCAGATTTGACAGTTCAG...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| 3UTR TCA 72 bp | GATAAGAGCAGCTCCAGCGCAGGTCAGTTGGACCCATaGGGGCCATGGTGGTGGGCAGCAAGCGAGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: DKSSSSAGQLDP*GPWWWAASEME Trigger: CTCCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGACCTGCGCTGGAGCTGCTCTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | GCGCAGGTCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGGGCACTTTCCGAGCCTaGTGGATGTTGGCACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: AQVSWTHEGHGGGQQARWGTFRA*WMLAPC Trigger: GCACGGTGCCAACATCCAGCAGGCTCGGAAAGTGCC...CCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGACCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCTGGAGCAGGCCTCCCTaGGGTCCTCAGGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGALEDKGTSSLKGKGRLWSRPP*GPQAQP Trigger: TGGCTGTGCCTGAGGACCTCAGGGAGGCCTGCTCCA...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | CCCCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGGTTGGCGGTCTCCACTaGTGGACCCATCAGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PHASHPRIPSLSPSSTVMVGGLH*WTHQSG Trigger: ACCGGACTGATGGGTCCATCAGTGGAGACCGCCAAC...CATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCGGCCGCTGGCGGCTCTaGGACTCTGCCCGTGAGATA | + |
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Preference number: 4 (lower is better) Translates to: VGALEDKGTSSLKGKGRLGRWRL*DSAREI Trigger: TATCTCACGGGCAGAGTCTCAGAGCCGCCAGCGGCC...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | GCGCAGGTCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGCTCCTCTTGGAAGGCTaGTGCCAGCTGCTTACTTGT | + |
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Preference number: 4 (lower is better) Translates to: AQVSWTHEGHGGGQQARWLLLEG*CQLLTC Trigger: ACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAGGAG...CCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGACCTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAACACTGCCACCACCACTaGCACCCCGTCCACTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKHCHHH*HPVHSQ Trigger: CTGGGAGTGGACGGGGTGGCAGTGGTGGTGGCAGTG...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCCCGGCCCCCATAGCTaGCCCCATAGGTTCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDPGPHS*PHRFWS Trigger: CGACCAGAACCTATGGGGGCAGCTATGGGGGCCGGG...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | GCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCACTGTGAACTCCTCTTaGAAGGCTGCTGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASHPRIPSLSPSSTVMRPTVNSS*KAAASC Trigger: GCAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGT...GGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | CCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGCCAGGCCTCCGTCCATaGCAGTCCTGTCTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCLPPTNTLTIPVFHSDEPGLRP*QSCLHQ Trigger: CTGATGAAGACAGGACTGTCATGGACGGAGGCCTGG...CTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACATGGATGTTGGCACCGTaGGTTCCGATCGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: TGGEWGCSEVGALEDKGTWMLAP*VPIARP Trigger: GGGTCTGGCGATCGGAACGCACGGTGCCAACATCCA...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTTGCCCCCATAGGTTCTaGTCGTGTGCAGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGCPHRF*SCAGKR Trigger: CCTCTTCCCTGCACACGACCAGAACCTATGGGGGCA...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACTGGAGGGGTCTGAGCTaGGGCCATAGGCAGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDWRGLS*GHRQDH Trigger: GTGGTCCTGCCTATGGCCCCAGCTCAGACCCCTCCA...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAAGGTCCTCTCGCACTGTaGACTCCTCTTGGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKGPLAL*TPLGRL Trigger: CAGCCTTCCAAGAGGAGTTCACAGTGCGAGAGGACC...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAAGTGCCTGGGCATTGCTaGTGTTCTCTCGGGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKVPGHC*CSLGCQ Trigger: TTGGCACCCGAGAGAACATCAGCAATGCCCAGGCAC...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCAGCTTCGAGCCTGTCTaGATGCCTCTGGTGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGALEDKGTSSLKGKGRLSFEPV*MPLVSP Trigger: GGGAGACACCAGAGGCATGCAGACAGGCTCGAAGCT...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACGAGCCTGCTGGATGTTaGCACCGTGCGTTCCGATCG | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDEPAGC*HRAFRS Trigger: CGATCGGAACGCACGGTGCCAACATCCAGCAGGCTC...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | GCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTCAAGGGGACTGGGATTaGCTGGCCGAAGTCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: AFSSTRQGYFLPTPLGDLQGDWD*LAEVVP Trigger: TGGAACGACTTCGGCCAGTCAATCCCAGTCCCCTTG...AAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACACCTTGGGAAGCTTGCTaGCAGAGTCACCCTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TGGEWGCSEVGALEDKGTPWEAC*QSHPSV Trigger: GACAGAAGGGTGACTCTGTCAGCAAGCTTCCCAAGG...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | CCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGTGCCAACCAGGTTCCTaGGCACTTGTACAGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PCLPPTNTLTIPVFHSDECQPGS*ALVQSP Trigger: AGGACTCTGTACAAGTGCCCAGGAACCTGGTTGGCA...CTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCCTGAGACTCTGCCCGTaGGATATAGTCAGCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: VGALEDKGTSSLKGKGRLLRLCP*DIVSHS Trigger: ACTGTGGCTGACTATATCTCACGGGCAGAGTCTCAG...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACAGAAGCTGCCTTTGGTTaGAAGGGGACTGGGATTGAC | + |
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Preference number: 4 (lower is better) Translates to: TGGEWGCSEVGALEDKGTEAAFG*KGTGID Trigger: GTCAATCCCAGTCCCCTTGCAACCAAAGGCAGCTTC...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | CTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTGTCACTCGAGCCTGTCTGCATaGCTCTGGTGTCTCCCCATA | + |
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Preference number: 4 (lower is better) Translates to: LIHQTRLFPPNSPGRPCHSSLSA*LWCLPI Trigger: TATGGGGAGACACCAGAGGCATGCAGACAGGCTCGA...GTGACAAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACACTTTCCGAGCCTGCTaGATGTTGGCACCGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDTFRAC*MLAPCV Trigger: AACGCACGGTGCCAACATCCAGCAGGCTCGGAAAGT...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTCCATTCCCTCCTCCCTaGGGTTCTTCTTGTCGTTAT | + |
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Preference number: 4 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGPFPPP*GSSCRY Trigger: ATAACGACAAGAAGAACCCCAGGGAGGAGGGAATGG...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | TCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGAGAAAGGTACTCAAGCAGTGCCTaGGCATTGCTGATGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVGPMRAMVVGSKRDGERYSSSA*ALLMFS Trigger: AGAGAACATCAGCAATGCCCAGGCACTGCTTGAGTA...CCTTTCTCCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCCTTCATTGCGGGACATaGGCAGCAATTTGGTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: TPSHPPDKVISSQLPWETLHCGT*AAIWCE Trigger: TTCGCACCAAATTGCTGCTCATGTCCCGCAATGAAG...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACATCGTCTCTGGGGTCTTaGTTCATCTTCCAGGCCATT | + |
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Preference number: 4 (lower is better) Translates to: TGGEWGCSEVGALEDKGTSSLGS*FIFQAI Trigger: AATGGCCTGGAAGATGAATCAAGACCCCAGAGACGA...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACAATCACCCAACAAAGATaGCCTCTTCACAGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TGGEWGCSEVGALEDKGTITQQR*PLHRGF Trigger: GAAGCCCCTGTGAAGAGGGCATCTTTGTTGGGTGAT...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTCTTGGAAGGCTGCTaGCAGCTGCTTACTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDLLEGC*QLLTCL Trigger: GAGACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAG...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAATCTGTCACCAGGTCCTaGTCGATTAGACTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKSVTRS*SIRLLS Trigger: AGAGAGGAGTCTAATCGAGCAGGACCTGGTGACAGA...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTCTTCACCCAACTCAATaGCAGTCACTCCGGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: AFSSTRQGYFLPTPLGDLLHPTQ*QSLRAL Trigger: AAGTGCCCGGAGTGACTGCCATTGAGTTGGGTGAAG...AAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTATCAACTGGAGGCTCTaGTTCAGATGTGTCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGINWRL*FRCVQE Trigger: CTCTTGGACACATCTGAACCAGAGCCTCCAGTTGAT...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | CCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGCTGCGATTTCGTCTCTaGGGTCTTGATTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PCLPPTNTLTIPVFHSDELRFRL*GLDSSS Trigger: GGAAGATGAATCAAGACCCCAGAGACGAAATCGCAG...CTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTGTGACAGAGTCTTCATaGACATCCTTTACAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGVTESS*TSFTKP Trigger: GGGCTTTGTAAAGGATGTCCATGAAGACTCTGTCAC...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACAGGCTCCGAATCAACTaGAGGCTCTGGTTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDRLRIN*RLWFRC Trigger: ACATCTGAACCAGAGCCTCCAGTTGATTCGGAGCCT...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR TCA 90 bp | TCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGAGAAAGGTTATCCACAATCTCCTaGATCACTTTCCCGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVGPMRAMVVGSKRDGERLSTIS*ITFPFF Trigger: AAAGAACGGGAAAGTGATTCAGGAGATTGTGGATAA...CCTTTCTCCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | TACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACGCAGTTGGCTCCCAGTaGTTTCTTGAACTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: YAFSSTRQGYFLPTPLGDAVGSQ*FLELLM Trigger: CATAAGGAGTTCAAGAAAGCACTGGGAGCCAACTGC...GTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR GCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAAAGAGGCTGTAAGGATTaGTGTCTGGATCCTTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKRGCKD*CLDPLA Trigger: TGCTAAAGGATCCAGACAGCAATCCTTACAGCCTCT...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS-3UTR CCA 90 bp | CCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGAAGGTTCCTGTTCATTaGCTCTCGAATAGACCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PCLPPTNTLTIPVFHSDEKVPVH*LSNRPL Trigger: TAGAGGTCTATTCGAGAGCCAATGAACAGGAACCTT...CTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR GCA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCATCTGTCTCTCACTCTaGCAGTTGTTCTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGALEDKGTSSLKGKGRLICLSL*QLFSKK Trigger: CTTCTTTGAGAACAACTGGCAGAGTGAGAGACAGAT...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR GCA 90 bp | CACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGAGGCCCCAGAAACGAAGGCTTCGGAAATaGATATCACCCAACAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HPRIPSLSPSSTVMRPQKRRLRK*ISPNKD Trigger: ATCTTTGTTGGGTGATATGCATTTCCGAAGCCTTCG...TTTCTGGGGCCTCATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR GCA 90 bp | CTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTGTCACCATAGATTCGGAAAGTaGAGGTCTCTTCACCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LIHQTRLFPPNSPGRPCHHRFGK*RSLHPT Trigger: AGTTGGGTGAAGAGACCTGCACTTTCCGAATCTATG...GTGACAAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CCA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTCTTGAACTCCTTATaGACATTTTCATTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSHPPDKVISSQLPWETFLNSL*TFSLEQ Trigger: CTGCTCCAATGAAAATGTCCATAAGGAGTTCAAGAA...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 90 bp | TTCATCAGTACGGCGGCGGCGGGAACGGCGACGACGGGCACTTGCTaGAGGAGGTTCACCAGGCTCCGAATCAACTGGAGGCTCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FISTAAAGTATTGTC*RRFTRLRINWRLWF Trigger: GAACCAGAGCCTCCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGTGCCCGTCGTCGCCGTTCCCGCCGCCGCCGTACTGATGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS TCA 90 bp | TTTCGTGCGTTCCAGGGGCCGCTGGCGGCTCTGAGACTCTGCCCGTaGGATATAGTCAGCCACAGTCACTGGTTGGCGGTCTCCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FRAFQGPLAALRLCP*DIVSHSHWLAVSTD Trigger: ATCAGTGGAGACCGCCAACCAGTGACTGTGGCTGACTATATCTCACGGGCAGAGTCTCAGAGCCGCCAGCGGCCCCTGGAACGCACGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 90 bp | CAGAGTCACCCTTCTGTCCTGAAAGAGAATCCTCTGAGGGTTTCGTaGGTTCCAGGGGCCGCTGGCGGCTCTGAGACTCTGCCCGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSHPSVLKENPLRVS*VPGAAGGSETLPVR Trigger: TCTCACGGGCAGAGTCTCAGAGCCGCCAGCGGCCCCTGGAACGCACGAAACCCTCAGAGGATTCTCTTTCAGGACAGAAGGGTGACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 90 bp | CATAGGTTCTGGTCGTGTGCAGGGAAGAGGAGGAGCTTTCGTCTGTaGTATAGCCCGCCTTGTCACTGCCACCACCACTGCCACCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRFWSCAGKRRSFRL*YSPPCHCHHHCHPV Trigger: GACGGGGTGGCAGTGGTGGTGGCAGTGACAAGGCGGGCTATACCACAGACGAAAGCTCCTCCTCTTCCCTGCACACGACCAGAACCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | GCGCAGGTCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGTTGAAGAAGCTGCCTTaGGTTGCAAGGGGACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQVSWTHEGHGGGQQARWLKKLP*VARGLG Trigger: TCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAA...CCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGACCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTCGAGCCTGCTGGATGTaGGCACCGTGCGTTCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGRACWM*APCVPI Trigger: GATCGGAACGCACGGTGCCAACATCCAGCAGGCTCG...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGTTGGACCCATGAGGGCCATGGTGGTGGGCAGCAAGCGAGATGGAGAAAGGGGCCCTTGGGAAGCTaGCTGACAGAGTCACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSWTHEGHGGGQQARWRKGPLGS*LTESPF Trigger: GAAGGGTGACTCTGTCAGCAAGCTTCCCAAGGGCCC...CTTTCTCCATCTCGCTTGCTGCCCACCACCATGGCCCTCATGGGTCCAACTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS TCA 90 bp | CACCGTGCGTTCCGATCGCCAGACCCATCAGGTCCTCTCGCACTGTaGACTCCTCTTGGAAGGCTGCTGCCAGCTGCTTACTTGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HRAFRSPDPSGPLAL*TPLGRLLPAAYLSL Trigger: TAGAGACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGTGCGAGAGGACCTGATGGGTCTGGCGATCGGAACGCACGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | GCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTGCAAGGGGACTGGGATaGACTGGCCGAAGTCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSSTRQGYFLPTPLGDLARGLG*TGRSRS Trigger: GGAACGACTTCGGCCAGTCAATCCCAGTCCCCTTGC...AAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCCACTGTGAACTCCTCTaGGAAGGCTGCTGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGALEDKGTSSLKGKGRLHCELL*EGCCQL Trigger: CAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGTG...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | CCCCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGCAGGTTCCTGGGCACTaGTACAGAGTCCTCGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PHASHPRIPSLSPSSTVMQVPGH*YRVLGK Trigger: TTTTCCGAGGACTCTGTACAAGTGCCCAGGAACCTG...CATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 90 bp | CCGATCGCCAGACCCATCAGGTCCTCTCGCACTGTGAACTCCTCTTaGAAGGCTGCTGCCAGCTGCTTACTTGTCTCTAGGTGCTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PIARPIRSSRTVNSS*KAAASCLLVSRCLV Trigger: TACTAAGCACCTAGAGACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGTGCGAGAGGACCTGATGGGTCTGGCGATCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 90 bp | ACGACGGGCACTTGCTGGAGGAGGTTCACCAGGCTCCGAATCAACTaGAGGCTCTGGTTCAGATGTGTCCAAGAGGCTGTAAGGATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTGTCWRRFTRLRIN*RLWFRCVQEAVRIA Trigger: AGCAATCCTTACAGCCTCTTGGACACATCTGAACCAGAGCCTCCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGTGCCCGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | CCCCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGTTGAGAAAGATGCAGTaGGCTCCCAGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHASHPRIPSLSPSSTVMLRKMQ*APSAFL Trigger: CAAGAAAGCACTGGGAGCCAACTGCATCTTTCTCAA...CATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | ACAAGAGGGAGGGGTATGACCCTGTTACACACCCCTCCACTAGCTCCTGGAGGTTTCGTCTCTGGGGTCTaGATTCATCTTCCAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRGRGMTLLHTPPLAPGGFVSGV*IHLPGH Trigger: ATGGCCTGGAAGATGAATCAAGACCCCAGAGACGAA...ACCTCCAGGAGCTAGTGGAGGGGTGTGTAACAGGGTCATACCCCTCCCTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 90 bp | ACTTGCTGGAGGAGGTTCACCAGGCTCCGAATCAACTGGAGGCTCTaGTTCAGATGTGTCCAAGAGGCTGTAAGGATTGCTGTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TCWRRFTRLRINWRL*FRCVQEAVRIAVWI Trigger: GATCCAGACAGCAATCCTTACAGCCTCTTGGACACATCTGAACCAGAGCCTCCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | CCCCATGCCTCCCACCCACGAATACCCTCACTATCCCCGTCTTCCACAGTGATGGCTCCCAGTGCTTTCTaGAACTCCTTATGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: PHASHPRIPSLSPSSTVMAPSAF*NSLWTF Trigger: AAATGTCCATAAGGAGTTCAAGAAAGCACTGGGAGC...CATCACTGTGGAAGACGGGGATAGTGAGGGTATTCGTGGGTGGGAGGCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | ACAGGCGGAGAATGGGGGTGTTCAGAGGTCGGGGCATTAGAGGATAAAGGCACAGACATGAGCAGCAATTaGGTGCGAAGGCTTCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGGEWGCSEVGALEDKGTDMSSN*VRRLRK Trigger: TTTCCGAAGCCTTCGCACCAAATTGCTGCTCATGTC...TGTGCCTTTATCCTCTAATGCCCCGACCTCTGAACACCCCCATTCTCCGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | ACGCCTTCTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTCCCTGGGGTTCTTCTaGTCGTTATCTCCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TPSHPPDKVISSQLPWETSLGFF*SLSPST Trigger: TGTGGAAGGAGATAACGACAAGAAGAACCCCAGGGA...GGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | GTCGGGGCATTAGAGGATAAAGGCACATCCAGTCTGAAAGGGAAGGGGAGGCTCACAGCCATGGTAACCTaGAAGAAGCTGCCTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGALEDKGTSSLKGKGRLTAMVT*KKLPLV Trigger: AACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGT...GAGCCTCCCCTTCCCTTTCAGACTGGATGTGCCTTTATCCTCTAATGCCCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 90 bp | TCATTGCGGGACATGAGCAGCAATTTGGTGCGAAGGCTTCGGAAATaGATATCACCCAACAAAGATGCCCTCTTCACAGGGGCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRDMSSNLVRRLRK*ISPNKDALFTGASV Trigger: CACAGAAGCCCCTGTGAAGAGGGCATCTTTGTTGGGTGATATGCATTTCCGAAGCCTTCGCACCAAATTGCTGCTCATGTCCCGCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS-3UTR CAA 90 bp | CTCATCCACCAGACAAGGTTATTTCCTCCCAACTCCCCTGGGAGACCTTGTCACTTAGTAGCTTCTTCATaGCGGGACATGAGCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LIHQTRLFPPNSPGRPCHLVASS*RDMSSN Trigger: ATTGCTGCTCATGTCCCGCAATGAAGAAGCTACTAA...GTGACAAGGTCTCCCAGGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | ACGGCGGCGGCGGGAACGGCGACGACGGGCACTTGCTaGAGGAGGTTCACCAGGCTCCGAATCAACTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAGTATTGTC*RRFTRLRINWR Trigger: CCTCCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGTGCCCGTCGTCGCCGTTCCCGCCGCCGCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | AGTACGGCGGCGGCGGGAACGGCGACGACGGGCACTTaGTGGAGGAGGTTCACCAGGCTCCGAATCAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: STAAAGTATTGT*WRRFTRLRINW Trigger: CCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGTGCCCGTCGTCGCCGTTCCCGCCGCCGCCGTACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CAA 72 bp | CAGTACGGCGGCGGCGGGAACGGCGACGACGGGCACTaGCTGGAGGAGGTTCACCAGGCTCCGAATCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: QYGGGGNGDDGH*LEEVHQAPNQL Trigger: CAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGTGCCCGTCGTCGCCGTTCCCGCCGCCGCCGTACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS TCA 72 bp | TTCCAGGGGCCGCTGGCGGCTCTGAGACTCTGCCCGTaGGATATAGTCAGCCACAGTCACTGGTTGGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FQGPLAALRLCP*DIVSHSHWLAV Trigger: GACCGCCAACCAGTGACTGTGGCTGACTATATCTCACGGGCAGAGTCTCAGAGCCGCCAGCGGCCCCTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | TCAATGGCAGTCACTCCGGGCACTTTCCGAGCCTGCTaGATGTTGGCACCGTGCGTTCCGATCGCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SMAVTPGTFRAC*MLAPCVPIARP Trigger: GGGTCTGGCGATCGGAACGCACGGTGCCAACATCCAGCAGGCTCGGAAAGTGCCCGGAGTGACTGCCATTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | AACTCAATGGCAGTCACTCCGGGCACTTTCCGAGCCTaGTGGATGTTGGCACCGTGCGTTCCGATCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSMAVTPGTFRA*WMLAPCVPIAR Trigger: TCTGGCGATCGGAACGCACGGTGCCAACATCCAGCAGGCTCGGAAAGTGCCCGGAGTGACTGCCATTGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | TGGTCGTGTGCAGGGAAGAGGAGGAGCTTTCGTCTGTaGTATAGCCCGCCTTGTCACTGCCACCACCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSCAGKRRSFRL*YSPPCHCHHHC Trigger: GCAGTGGTGGTGGCAGTGACAAGGCGGGCTATACCACAGACGAAAGCTCCTCCTCTTCCCTGCACACGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CAA 90 bp | TTGGAGCAGGCCTCCCTGAGGTCCTCAGGCACAGCCATGGTAACCTaGAAGAAGCTGCCTTTGGTTGCAAGGGGACTGGGATTGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LEQASLRSSGTAMVT*KKLPLVARGLGLTG Trigger: GCCAGTCAATCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGTGCCTGAGGACCTCAGGGAGGCCTGCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CAA 72 bp | GCCTCCCTGAGGTCCTCAGGCACAGCCATGGTAACCTaGAAGAAGCTGCCTTTGGTTGCAAGGGGACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASLRSSGTAMVT*KKLPLVARGLG Trigger: TCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGTGCCTGAGGACCTCAGGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS TCA 72 bp | ACGGCGGCGGCGGCTGCGATTTCGTCTCTGGGGTCTTaGTTCATCTTCCAGGCCATTCTCTGTCATGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAAAISSLGS*FIFQAILCHVR Trigger: CCTAACATGACAGAGAATGGCCTGGAAGATGAATCAAGACCCCAGAGACGAAATCGCAGCCGCCGCCGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | AAGCCCAGCCCAATCTGCCGAAGCTGTTCGTCAATCTaGAGTCTCTCCAGGCGAAGCTGTTCAACCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPSPICRSCSSI*SLSRRSCSTSC Trigger: GCAGGAGGTTGAACAGCTTCGCCTGGAGAGACTGCAGATTGACGAACAGCTTCGGCAGATTGGGCTGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | CATCAGTCCGGTTACCACGATTACGGCGGCGGCGGCTaGGATTTCGTCTCTGGGGTCTTGATTCATCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HQSGYHDYGGGG*DFVSGVLIHLP Trigger: TGGAAGATGAATCAAGACCCCAGAGACGAAATCGCAGCCGCCGCCGCCGTAATCGTGGTAACCGGACTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CAA 90 bp | CTGAGGTCCTCAGGCACAGCCATGGTAACCTTGAAGAAGCTGCCTTaGGTTGCAAGGGGACTGGGATTGACTGGCCGAAGTCGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSSGTAMVTLKKLP*VARGLGLTGRSRSR Trigger: TCTGGAACGACTTCGGCCAGTCAATCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGTGCCTGAGGACCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS TCA 72 bp | TATAGTCAGCCACAGTCACTGGTTGGCGGTCTCCACTaGTGGACCCATCAGTCCGGTTACCACGATTACGGC | + |
|
Preference number: 6 (lower is better) Translates to: YSQPQSLVGGLH*WTHQSGYHDYG Trigger: GCCGTAATCGTGGTAACCGGACTGATGGGTCCATCAGTGGAGACCGCCAACCAGTGACTGTGGCTGACTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | AGACCCATCAGGTCCTCTCGCACTGTGAACTCCTCTTaGAAGGCTGCTGCCAGCTGCTTACTTGTCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPIRSSRTVNSS*KAAASCLLVSR Trigger: CCTAGAGACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGTGCGAGAGGACCTGATGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | CACAGCCATGGTAACCTTGAAGAAGCTGCCTTTGGTTaGAAGGGGACTGGGATTGACTGGCCGAAGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSHGNLEEAAFG*KGTGIDWPKSF Trigger: GAACGACTTCGGCCAGTCAATCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | ACTTGCTGGAGGAGGTTCACCAGGCTCCGAATCAACTaGAGGCTCTGGTTCAGATGTGTCCAAGAGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TCWRRFTRLRIN*RLWFRCVQEAV Trigger: TACAGCCTCTTGGACACATCTGAACCAGAGCCTCCAGTTGATTCGGAGCCTGGTGAACCTCCTCCAGCAAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CAA 72 bp | TCAGGCACAGCCATGGTAACCTTGAAGAAGCTGCCTTaGGTTGCAAGGGGACTGGGATTGACTGGCCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGTAMVTLKKLP*VARGLGLTGRS Trigger: ACTTCGGCCAGTCAATCCCAGTCCCCTTGCAACCAAAGGCAGCTTCTTCAAGGTTACCATGGCTGTGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | CGCACTGTGAACTCCTCTTGGAAGGCTGCTGCCAGCTaGTTACTTGTCTCTAGGTGCTTAGTAGCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RTVNSSWKAAAS*LLVSRCLVASS Trigger: TGAAGAAGCTACTAAGCACCTAGAGACAAGTAAGCAGCTGGCAGCAGCCTTCCAAGAGGAGTTCACAGTGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | CTCGGAAAATTCAAGGTAGCTTCGAGCCTGTCTGCATaGCTCTGGTGTCTCCCCATAGATTCGGAAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGKFKVASSLSA*LWCLPIDSESA Trigger: TGCACTTTCCGAATCTATGGGGAGACACCAGAGGCATGCAGACAGGCTCGAAGCTACCTTGAATTTTCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS GCA 72 bp | GACATGAGCAGCAATTTGGTGCGAAGGCTTCGGAAATaGATATCACCCAACAAAGATGCCCTCTTCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DMSSNLVRRLRK*ISPNKDALFTG Trigger: CCCTGTGAAGAGGGCATCTTTGTTGGGTGATATGCATTTCCGAAGCCTTCGCACCAAATTGCTGCTCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
||
| CDS CCA 72 bp | TCCCGTTCTTTCCGATCACTTTGCCAACCAGGTTCCTaGGCACTTGTACAGAGTCCTCGGAAAATTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SRSFRSLCQPGS*ALVQSPRKIQG Trigger: ACCTTGAATTTTCCGAGGACTCTGTACAAGTGCCCAGGAACCTGGTTGGCAAAGTGATCGGAAAGAACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS CAA 72 bp | CTTTCCGATCACTTTGCCAACCAGGTTCCTGGGCACTaGTACAGAGTCCTCGGAAAATTCAAGGTAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LSDHFANQVPGH*YRVLGKFKVAS Trigger: CGAAGCTACCTTGAATTTTCCGAGGACTCTGTACAAGTGCCCAGGAACCTGGTTGGCAAAGTGATCGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS CAA 72 bp | TTAGTAGCTTCTTCATTGCGGGACATGAGCAGCAATTaGGTGCGAAGGCTTCGGAAATGCATATCACCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LVASSLRDMSSN*VRRLRKCISPN Trigger: GTTGGGTGATATGCATTTCCGAAGCCTTCGCACCAAATTGCTGCTCATGTCCCGCAATGAAGAAGCTACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS CAA 72 bp | ATGTTGAGAAAGATGCAGTTGGCTCCCAGTGCTTTCTaGAACTCCTTATGGACATTTTCATTGGAGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: MLRKMQLAPSAF*NSLWTFSLEQA Trigger: GGCCTGCTCCAATGAAAATGTCCATAAGGAGTTCAAGAAAGCACTGGGAGCCAACTGCATCTTTCTCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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| CDS CAA 72 bp | AAGAGCTCACTGTTTGTGATGTTGAGAAAGATGCAGTaGGCTCCCAGTGCTTTCTTGAACTCCTTATGGACA | + |
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Preference number: 6 (lower is better) Translates to: KSSLFVMLRKMQ*APSAFLNSLWT Trigger: TGTCCATAAGGAGTTCAAGAAAGCACTGGGAGCCAACTGCATCTTTCTCAACATCACAAACAGTGAGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018909.4 |
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