Pregenerated sensors for FUT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055373Ensembl transcript IDs: ENSMUST00000084770.5, ENSMUST00000108199.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAATGTCATGGATGGTGTAGGAATTCTTTACCCTGCTCACATCTATaGTATCATGACTGCTGTAGCTGCCCTTTCCATGGCAGAGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: QCHGWCRNSLPCSHL*YHDCCSCPFHGRVG Trigger: GCCTACTCTGCCATGGAAAGGGCAGCTACAGCAGTCATGATATCATAGATGTGAGCAGGGTAAAGAATTCCTACACCATCCATGACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CCA 90 bp | CAGATCAAATATTGGCTGAGTGTTACACACCTACAGTATCATGAATaGTGTAGTCCTTTCACACACCTACAATGTCATGGATGGTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: QIKYWLSVTHLQYHE*CSPFTHLQCHGWCR Trigger: CCTACACCATCCATGACATTGTAGGTGTGTGAAAGGACTACACCATTCATGATACTGTAGGTGTGTAACACTCAGCCAATATTTGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CCA 90 bp | GTCACAGGATTTATTAACAGAGCAGCCAATAGCATATCTTGTCAGTaGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: VTGFINRAANSISCQ*YIFHSHIVKLIPSA Trigger: AGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCACTGACAAGATATGCTATTGGCTGCTCTGTTAATAAATCCTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR GCA 90 bp | CTCATGATCTGTTTAGAGCCATCCTGGATCTCTAGGCATATTATCTaGTTTTATTATACCAGCAGCAAGCCAATTTGGTTGAATCAATCA | + |
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Preference number: 1 (lower is better) Translates to: LMICLEPSWISRHII*FYYTSSKPIWLNQS Trigger: TGATTGATTCAACCAAATTGGCTTGCTGCTGGTATAATAAAAGCAGATAATATGCCTAGAGATCCAGGATGGCTCTAAACAGATCATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR TCA 90 bp | CACTCTAGGACTGAGCTTCTCACAGTAAATAGAAATCTTGTAAACTaGTGCTGGTTTCCCAGTGAGAGTATCTTTTATACTTTCTACTTC | + |
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Preference number: 1 (lower is better) Translates to: HSRTELLTVNRNLVN*CWFPSESIFYTFYF Trigger: GAAGTAGAAAGTATAAAAGATACTCTCACTGGGAAACCAGCATCAGTTTACAAGATTTCTATTTACTGTGAGAAGCTCAGTCCTAGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR TCA 90 bp | ATAAAGACTCCAGAAGAGAGATGCCCACAGCAAAAACCACTTGATTaGGATGATGTTTGCAGTATGTTCACTATACAACAAATCAAATTG | + |
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Preference number: 1 (lower is better) Translates to: IKTPEERCPQQKPLD*DDVCSMFTIQQIKL Trigger: CAATTTGATTTGTTGTATAGTGAACATACTGCAAACATCATCTCAATCAAGTGGTTTTTGCTGTGGGCATCTCTCTTCTGGAGTCTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR TCA 90 bp | ATGTTTGCAGTATGTTCACTATACAACAAATCAAATTGGCAAGAATaGAGGGTAAATCTGTTTCTCTCCCCACAGTTTGGTAATACACAT | + |
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Preference number: 1 (lower is better) Translates to: MFAVCSLYNKSNWQE*RVNLFLSPQFGNTH Trigger: ATGTGTATTACCAAACTGTGGGGAGAGAAACAGATTTACCCTTCATTCTTGCCAATTTGATTTGTTGTATAGTGAACATACTGCAAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR TCA 90 bp | AAGCTTGCATATAAGGTGGCAGTAGAATATGCCACCAAAGCTGTATaGTTCATTATAGCATGCATTTTTCACTTACAAACACAATCTTAC | + |
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Preference number: 1 (lower is better) Translates to: KLAYKVAVEYATKAV*FIIACIFHLQTQSY Trigger: GTAAGATTGTGTTTGTAAGTGAAAAATGCATGCTATAATGAATCATACAGCTTTGGTGGCATATTCTACTGCCACCTTATATGCAAGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAAGCCACCACCCCCACTTaGCTCCCAGTACTTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: IKFPPYPSLPLIEQSPLEATTPT*LPVLSN Trigger: ATTAGAAAGTACTGGGAGGCAAGTGGGGGTGGTGGC...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAACGTGTGGGGTTGACATaGCTGTCTCTCAACATATCA | + |
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Preference number: 2 (lower is better) Translates to: IKFPPYPSLPLIEQSPLERVGLT*LSLNIS Trigger: TGATATGTTGAGAGACAGGCATGTCAACCCCACACG...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATTTCTCAAAGCAGATGTaGGTCAGAGAACCTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SCPFHGRVGCSSFESMFYFSKQM*VREPLG Trigger: TCCCAGAGGTTCTCTGACTCACATCTGCTTTGAGAA...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCATTCCCTACCACTCATTaGACAAAGCCCCCTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: KACGPCTQVKRKLAYKVAFPTTH*TKPPRR Trigger: TCTTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAA...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCAGATCTCACAGTAACATaGAAGGCTTCTCTAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: KACGPCTQVKRKLAYKVADLTVT*KASLGF Trigger: AAATCCTAGAGAAGCCTTTCATGTTACTGTGAGATC...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAAAGTAGTACTGGGTCTTaGATGTTAACTGAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: IKFPPYPSLPLIEQSPLESSTGS*MLTEIL Trigger: CAAAATCTCAGTTAACATCCAAGACCCAGTACTACT...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCAGAACATCTTGGACTTTaGAATATAGTAACACCTACC | + |
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Preference number: 2 (lower is better) Translates to: KACGPCTQVKRKLAYKVAEHLGL*NIVTPT Trigger: GGTAGGTGTTACTATATTTCAAAGTCCAAGATGTTC...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCAAGTACCATGAACCTATaGACTGTACATTTGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: KACGPCTQVKRKLAYKVASTMNL*TVHLAL Trigger: TAATGCCAAATGTACAGTTCATAGGTTCATGGTACT...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATTCAGTTTCAGGACTGTaGCTTGAAATAGTAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SCPFHGRVGCSSFESMFYSVSGL*LEIVSR Trigger: TCTACTTACTATTTCAAGTCACAGTCCTGAAACTGA...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCATCTGTGGTCTTTCTTTaGTCAAATGATTCCATGCTA | + |
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Preference number: 2 (lower is better) Translates to: KACGPCTQVKRKLAYKVASVVFL*SNDSML Trigger: TAGCATGGAATCATTTGAGCAAAGAAAGACCACAGA...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGGAAAGTTAATGCTATTAAACAACTGTCGCAATGCAATGAAACACTTATCACCAAAATATACATaGTCCTCAAGGGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TQGKLMLLNNCRNAMKHLSPKYT*SSREGR Trigger: CCTGCCCTCCCTTGAGGACCATGTATATTTTGGTGA...TAAGTGTTTCATTGCATTGCGACAGTTGTTTAATAGCATTAACTTTCCCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTTCACCAAAATATACATaGTCCTCAAGGGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHQLAPLHKCGTSKNSISSPKYT*SSREGR Trigger: CCTGCCCTCCCTTGAGGACCATGTATATTTTGGTGA...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| 3UTR-3UTR CCA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTTACCTCTGTGGCAGTTaGGGATCAACAATATCACCT | + |
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Preference number: 2 (lower is better) Translates to: YTLKLYIPVDEGTRHASTYLCGS*GSTISP Trigger: AGGTGATATTGTTGATCCCCAACTGCCACAGAGGTA...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | GGATTTATTAACAGAGCAGCCAATAGCATATCTTGTCAGTGGTACATTTTCCACCTTTCTTTGCTCAAATaGTTCCATGCTAAGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GFINRAANSISCQWYIFHLSLLK*FHAKGA Trigger: AGCTCCCTTAGCATGGAATCATTTGAGCAAAGAAAG...GTGGAAAATGTACCACTGACAAGATATGCTATTGGCTGCTCTGTTAATAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | ATCATGATAACAACAGAGATGAGATCAGGCACAGAGAGTGAGCTAGTGAGTGAACAAAAACCACTTGATTaGGATGATGTTTGCAGTATG | + |
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Preference number: 2 (lower is better) Translates to: IMITTEMRSGTESELVSEQKPLD*DDVCSM Trigger: CATACTGCAAACATCATCTCAATCAAGTGGTTTTTG...TTCACTCACTAGCTCACTCTCTGTGCCTGATCTCATCTCTGTTGTTATCATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATTATTGTATTTGCATATaGCCAGTTATCTCCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SCPFHGRVGCSSFESMFYYCICI*PVISST Trigger: TGTAGAGGAGATAACTGGGCATATGCAAATACAATA...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAATCTCCATTGTCACCCTaGAGTGACAACACATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQSPLSP*SDNTFS Trigger: TGAAAATGTGTTGTCACTGCAGGGTGACAATGGAGA...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTAGACGTTCTGTGGCTTaGCATCAGGTTCTAAATATG | + |
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Preference number: 2 (lower is better) Translates to: YTLKLYIPVDEGTRHASTRRSVA*HQVLNM Trigger: CATATTTAGAACCTGATGCCAAGCCACAGAACGTCT...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | ATCATGATAACAACAGAGATGAGATCAGGCACAGAGAGTGAGCTAGTGAGTGAAAAATACTTAATACCTTaGCTTGGCTTACACTATTGG | + |
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Preference number: 2 (lower is better) Translates to: IMITTEMRSGTESELVSEKYLIP*LGLHYW Trigger: CCAATAGTGTAAGCCAAGCCAAGGTATTAAGTATTT...TTCACTCACTAGCTCACTCTCTGTGCCTGATCTCATCTCTGTTGTTATCATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAACATTCAAACACATGTTaGGTAGGTAAAGAATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQHSNTC*VGKEWS Trigger: ACTCCATTCTTTACCTACTCAACATGTGTTTGAATG...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR GCA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTGGGAACTCAAATATATaGACATATCAACTTAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: YTLKLYIPVDEGTRHASTGNSNI*TYQLRP Trigger: AGGCCTAAGTTGATATGTGCATATATTTGAGTTCCC...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CAA 90 bp | AGATGCACTTGTGAAATACTTAATACCTTGGCTTGGCTTACACTATaGGCATTTAATTGTACTTCCAGTCCAAGAATGAGCTCAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: RCTCEILNTLAWLTL*AFNCTSSPRMSSNS Trigger: TGAATTTGAGCTCATTCTTGGACTGGAAGTACAATTAAATGCCAATAGTGTAAGCCAAGCCAAGGTATTAAGTATTTCACAAGTGCATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CAA 90 bp | AATCCAAGTGAGCTAAGGAAAGGCAATATCTCATGCCTGTATTGTTaGAGTATAGAATTACTTCTATTTAATAGACAGGACCCAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: NPSELRKGNISCLYC*SIELLLFNRQDPDF Trigger: GAAGTCTGGGTCCTGTCTATTAAATAGAAGTAATTCTATACTCAAACAATACAGGCATGAGATATTGCCTTTCCTTAGCTCACTTGGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAACTTCGTTTAATTCTGTaGTCTTTCTTTGCTCAAATG | + |
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Preference number: 2 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQLRLIL*SFFAQM Trigger: CATTTGAGCAAAGAAAGACCACAGAATTAAACGAAG...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAACTTGGCTTACACTATTaGCATTTAATTGTACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQLGLHY*HLIVLP Trigger: TGGAAGTACAATTAAATGCCAATAGTGTAAGCCAAG...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGGAAAGTTAATGCTATTAAACAACTGTCGCAATGCAATGAAACACTTACTTAATACCTTGGCTTaGCTTACACTATTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: TQGKLMLLNNCRNAMKHLLNTLA*LTLLAF Trigger: AAATGCCAATAGTGTAAGCCAAGCCAAGGTATTAAG...TAAGTGTTTCATTGCATTGCGACAGTTGTTTAATAGCATTAACTTTCCCTGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CAA 90 bp | ATCTTCCACACTATGTTTGTTTCTCTTCTATTGAATATTCACCCTTaGGCTTGTTTAAATTTTCAGCAATTCTTACGAGCTAAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: IFHTMFVSLLLNIHP*ACLNFQQFLRAKLP Trigger: TGGCAGCTTAGCTCGTAAGAATTGCTGAAAATTTAAACAAGCCAAAGGGTGAATATTCAATAGAAGAGAAACAAACATAGTGTGGAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CAA 90 bp | ATCATGATAACAACAGAGATGAGATCAGGCACAGAGAGTGAGCTAGTGAGTGAATCACTACGTGTGGGGTaGACATGCCTGTCTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: IMITTEMRSGTESELVSESLRVG*TCLSLN Trigger: GTTGAGAGACAGGCATGTCAACCCCACACGTAGTGA...TTCACTCACTAGCTCACTCTCTGTGCCTGATCTCATCTCTGTTGTTATCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR GCA 72 bp | ACATGGTCCTCAAGGGAGGGCAGGAAAATTAAACGGTaGCCCAAATGCAGCGTGTTTCTTCTTATCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: TWSSREGRKIKR*PKCSVFLLILK Trigger: TTTCAGGATAAGAAGAAACACGCTGCATTTGGGGCACCGTTTAATTTTCCTGCCCTCCCTTGAGGACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| 3UTR GCA 72 bp | GTGGTTAGTGAGATCATCAGTGCCACCACCCCCACTTaGCTCCCAGTACTTTCTAATTTCAGTAGATGTTAC | + |
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Preference number: 3 (lower is better) Translates to: VVSEIISATTPT*LPVLSNFSRCY Trigger: GTAACATCTACTGAAATTAGAAAGTACTGGGAGGCAAGTGGGGGTGGTGGCACTGATGATCTCACTAACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CAA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAAGTGAGTAGACAAAGCTaGCCATTCAAACACATGTTG | + |
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Preference number: 3 (lower is better) Translates to: IKFPPYPSLPLIEQSPLEVSRQS*PFKHML Trigger: CAACATGTGTTTGAATGGCAAGCTTTGTCTACTCAC...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR TCA 72 bp | TATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTaGACAAAGCCCCCTAGAAGAGAACACGAAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: YQISPLPFPTTH*TKPPRREHEGK Trigger: TTTTCCTTCGTGTTCTCTTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCATTCTCTCCCCACAGTTaGGTAATACACATTTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: KACGPCTQVKRKLAYKVAFSPHS*VIHICL Trigger: TAGGCAAATGTGTATTACCAAACTGTGGGGAGAGAA...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR GCA 72 bp | CTGTGGCTCAGAAATGCTAGCAAATTACACTATAGGTaGTGGGAGCTAAACGGATGGACTTTGATTATGAGT | + |
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Preference number: 3 (lower is better) Translates to: LWLRNASKLHYR*WELNGWTLIMS Trigger: ACTCATAATCAAAGTCCATCCGTTTAGCTCCCAGCACCTATAGTGTAATTTGCTAGCATTTCTGAGCCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR GCA 72 bp | GACTGCTGTAGCTGCCCTTTCCATGGCAGAGTAGGCTaGTCTTCGTTTGAATCAATGTTTTATTTTTGGATT | + |
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Preference number: 3 (lower is better) Translates to: DCCSCPFHGRVG*SSFESMFYFWI Trigger: AATCCAAAAATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCTACAGCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CCA 72 bp | AAGATTAAGTCTGCTTATTTTAGGAAACGCTCTATGTaGTTAGTGAGATCATCAGTGCCACCACCCCCACTT | + |
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Preference number: 3 (lower is better) Translates to: KIKSAYFRKRSM*LVRSSVPPPPL Trigger: AAGTGGGGGTGGTGGCACTGATGATCTCACTAACCACATAGAGCGTTTCCTAAAATAAGCAGACTTAATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR CCA 72 bp | TGGCTCAGAAATGCTAGCAAATTACACTATAGGTGCTaGGAGCTAAACGGATGGACTTTGATTATGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: WLRNASKLHYRC*ELNGWTLIMSL Trigger: CAGACTCATAATCAAAGTCCATCCGTTTAGCTCCCAGCACCTATAGTGTAATTTGCTAGCATTTCTGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CAA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAAGAATCTAGAAGCAATTaGAACAGAAGAGATTATCCC | + |
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Preference number: 3 (lower is better) Translates to: IKFPPYPSLPLIEQSPLEESRSN*NRRDYP Trigger: GGGATAATCTCTTCTGTTCAAATTGCTTCTAGATTC...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATCTAAACGGATGGACTTaGATTATGAGTCTGTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCPFHGRVGCSSFESMFYLNGWT*IMSLFH Trigger: GTGAAACAGACTCATAATCAAAGTCCATCCGTTTAG...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | TATTGGCTGAGTGTTACACACCTACAGTATCATGAATaGTGTAGTCCTTTCACACACCTACAATGTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: YWLSVTHLQYHE*CSPFTHLQCHG Trigger: TCCATGACATTGTAGGTGTGTGAAAGGACTACACCATTCATGATACTGTAGGTGTGTAACACTCAGCCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTTTAACTAAGTCTCCATaGTCACCCTGCAGTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: YTLKLYIPVDEGTRHASTLTKSP*SPCSDN Trigger: GTTGTCACTGCAGGGTGACAATGGAGACTTAGTTAA...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGGAAAGTTAATGCTATTAAACAACTGTCGCAATGCAATGAAACACTTACTCTTGAGCTTTGAGTaGAGGGGAGCTGACATCATA | + |
|
Preference number: 3 (lower is better) Translates to: TQGKLMLLNNCRNAMKHLLLSFE*RGADII Trigger: TATGATGTCAGCTCCCCTCAACTCAAAGCTCAAGAG...TAAGTGTTTCATTGCATTGCGACAGTTGTTTAATAGCATTAACTTTCCCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATGGAACATCTTGGACTTaGAAATATAGTAACACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SCPFHGRVGCSSFESMFYGTSWT*KYSNTY Trigger: GTAGGTGTTACTATATTTCAAAGTCCAAGATGTTCC...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCAACTGCCTATCACCTTTaGATAACAGATGAGAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: KACGPCTQVKRKLAYKVATAYHL*ITDEKS Trigger: AGATTTCTCATCTGTTATCAAAAGGTGATAGGCAGT...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | AAAATGAAAGCAGAACAGGATTGCATCTTGGCTCACTaGCTCATCAGCACTAAAAATCACATGTCACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KMKAEQDCILAH*LISTKNHMSLC Trigger: ACAAAGTGACATGTGATTTTTAGTGCTGATGAGCCAGTGAGCCAAGATGCAATCCTGTTCTGCTTTCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTCACAGCAAAAACCACTaGATTGAGATGATGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YTLKLYIPVDEGTRHASTHSKNH*IEMMFA Trigger: TGCAAACATCATCTCAATCAAGTGGTTTTTGCTGTG...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | TCCTCTACACTTACAGAAGAGAATTTTGCAGGCAGATaGAAGTTCATAGATAACATGCTCCCAAATTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSTLTEENFAGR*KFIDNMLPNSV Trigger: CACTGAATTTGGGAGCATGTTATCTATGAACTTTCATCTGCCTGCAAAATTCTCTTCTGTAAGTGTAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | GGTGATAACTTGCTCATGATCTGTTTAGAGCCATCCTaGATCTCTAGGCATATTATCTGCTTTTATTATACC | + |
|
Preference number: 3 (lower is better) Translates to: GDNLLMICLEPS*ISRHIICFYYT Trigger: GGTATAATAAAAGCAGATAATATGCCTAGAGATCCAGGATGGCTCTAAACAGATCATGAGCAAGTTATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | AGCAAATTACACTATAGGTGCTGGGAGCTAAACGGATaGACTTTGATTATGAGTCTGTTTCACATTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SKLHYRCWELNG*TLIMSLFHIFL Trigger: CAAGAAAATGTGAAACAGACTCATAATCAAAGTCCATCCGTTTAGCTCCCAGCACCTATAGTGTAATTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAACCTAATCTATTGTATTaGCATATGCCCAGTTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQPNLLY*HMPSYL Trigger: GAGATAACTGGGCATATGCAAATACAATAGATTAGG...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | AACGGTGCCCCAAATGCAGCGTGTTTCTTCTTATCCTaGAAACTTGAATTATGTCTCATTAATCTTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGAPNAACFFLS*KLELCLINLFH Trigger: GTGAAAAAGATTAATGAGACATAATTCAAGTTTTCAGGATAAGAAGAAACACGCTGCATTTGGGGCACCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| 3UTR TCA 72 bp | GACTCGGGAAAGAAATTGATCAAATATGTGCAATTTTaGTGGCTGCAAGAGAACCTAATAATTGCCTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: DSGKKLIKYVQF*WLQENLIIAYL Trigger: AAGGTAGGCAATTATTAGGTTCTCTTGCAGCCATCAAAATTGCACATATTTGATCAATTTCTTTCCCGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR GCA 72 bp | AGATCATACTCTTCGTTTAATTCTGTGGTCTTTCTTTaGTCAAATGATTCCATGCTAAGGGAGCTTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSYSSFNSVVFL*SNDSMLRELMS Trigger: AGACATAAGCTCCCTTAGCATGGAATCATTTGAGCAAAGAAAGACCACAGAATTAAACGAAGAGTATGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGGAAAGTTAATGCTATTAAACAACTGTCGCAATGCAATGAAACACTTATTACAGAAGAGAATTTaGCAGGCAGATGAAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TQGKLMLLNNCRNAMKHLLQKRI*QADESS Trigger: TGAACTTTCATCTGCCTGCAAAATTCTCTTCTGTAA...TAAGTGTTTCATTGCATTGCGACAGTTGTTTAATAGCATTAACTTTCCCTGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | ACTGAGCTTCTCACAGTAAATAGAAATCTTGTAAACTaGTGCTGGTTTCCCAGTGAGAGTATCTTTTATACT | + |
|
Preference number: 3 (lower is better) Translates to: TELLTVNRNLVN*CWFPSESIFYT Trigger: AGTATAAAAGATACTCTCACTGGGAAACCAGCATCAGTTTACAAGATTTCTATTTACTGTGAGAAGCTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | TATCTAATGTACTGCCTATCACCTTTTGATAACAGATaGGAAATCTGTGGCTCAGAAATGCTAGCAAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: YLMYCLSPFDNR*EICGSEMLANY Trigger: GTAATTTGCTAGCATTTCTGAGCCACAGATTTCTCATCTGTTATCAAAAGGTGATAGGCAGTACATTAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | CTCTTTATCATTAAAAAGTACTCCTTTATCCCATGCTaGTATACATGCAGAATAAGCCTCATAACTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LFIIKKYSFIPC*YTCRISLITTE Trigger: CTCAGTAGTTATGAGGCTTATTCTGCATGTATACCAGCATGGGATAAAGGAGTACTTTTTAATGATAAAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | TTATTTACTAGGCAACCATTAATAACCCCTCCTGTATaGACAAATGCTTATCCTTTAGCTTCTGAAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFTRQPLITPPV*TNAYPLASEIS Trigger: AGAGATTTCAGAAGCTAAAGGATAAGCATTTGTTCATACAGGAGGGGTTATTAATGGTTGCCTAGTAAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR TCA 72 bp | TATAAGGTGGCAGTAGAATATGCCACCAAAGCTGTATaGTTCATTATAGCATGCATTTTTCACTTACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: YKVAVEYATKAV*FIIACIFHLQT Trigger: TGTTTGTAAGTGAAAAATGCATGCTATAATGAATCATACAGCTTTGGTGGCATATTCTACTGCCACCTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR GCA 72 bp | AAGCTCTTTATCATTAAAAAGTACTCCTTTATCCCATaGTGGTATACATGCAGAATAAGCCTCATAACTACT | + |
|
Preference number: 3 (lower is better) Translates to: KLFIIKKYSFIP*WYTCRISLITT Trigger: AGTAGTTATGAGGCTTATTCTGCATGTATACCAGCATGGGATAAAGGAGTACTTTTTAATGATAAAGAGCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CCA 72 bp | CTCCACTTTTATGTAGACAAGTGGATATTCTTGATTTaGGTCTTATATTGTCCATTGTTCACATCATATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LHFYVDKWIFLI*VLYCPLFTSYV Trigger: CACATATGATGTGAACAATGGACAATATAAGACCCAAATCAAGAATATCCACTTGTCTACATAAAAGTGGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATGCTCGTTGTAATACTTaGCCCTGGCATGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCPFHGRVGCSSFESMFYARCNT*PWHAQG Trigger: ACCCTGAGCATGCCAGGGTCAAGTATTACAACGAGC...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGTGGCAGTTGGGGATCAACAATATCACCTGTGTAACTATGTCTTTAAACAGACTCCATTGGACTaGAGACCCAGCTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVAVGDQQYHLCNYVFKQTPLD*RPSCWW Trigger: CCACCAACAGCTGGGTCTTCAGTCCAATGGAGTCTG...TTTAAAGACATAGTTACACAGGTGATATTGTTGATCCCCAACTGCCACAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTGGTGGCCTGGCCTGCTaGGGTAAGTTAGTCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISGGLAC*GKLVRS Trigger: GGATCTGACTAACTTACCTCAGCAGGCCAGGCCACC...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGTGGCAGTTGGGGATCAACAATATCACCTGTGTAACTATGTCTTTAAAATCCAAATCCATTTCTaGAAGGGTGGCCTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVAVGDQQYHLCNYVFKIQIHF*KGGLAC Trigger: GCAGGCCAGGCCACCCTTTCAGAAATGGATTTGGAT...TTTAAAGACATAGTTACACAGGTGATATTGTTGATCCCCAACTGCCACAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTCAGACTCCATTGGACTaGAGACCCAGCTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISQTPLD*RPSCWW Trigger: CCACCAACAGCTGGGTCTTCAGTCCAATGGAGTCTG...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTGGTGGCCTGGCCTGCTaGGGTAAGTTAGTCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSGGLAC*GKLVRS Trigger: GGATCTGACTAACTTACCTCAGCAGGCCAGGCCACC...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAAAAGTTAGAGTCAGGTTaGACAAGTGTTCAATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKFPPYPSLPLIEQSPLEKLESG*TSVQCH Trigger: GTGGCATTGAACACTTGTTCAACCTGACTCTAACTT...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTATCCAAATCCATTTCTaGAAGGGTGGCCTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISIQIHF*KGGLAC Trigger: GCAGGCCAGGCCACCCTTTCAGAAATGGATTTGGAT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATGAAATGGGCGAAGAATaGCTTTGGATGTTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPFHGRVGCSSFESMFYEMGEE*LWMLMS Trigger: TGACATCAACATCCAAAGGCATTCTTCGCCCATTTC...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGTGGACCATGCACACAGGTTAAGAGAAAGCTTGCATATAAGGTGGCAACACCAACTTCTCCTTaGTTGGCACTTCAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: KACGPCTQVKRKLAYKVATPTSP*LALQTQ Trigger: TTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGT...TGCCACCTTATATGCAAGCTTTCTCTTAACCTGTGTGCATGGTCCACATGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | CATATTGAAATCTTACTCTGTGTCAGCACTGTATTCCTTGTAGGTTCCCACTTTTACTTGACCCTGGCATaGTCAGGGTTCCAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: HIEILLCVSTVFLVGSHFYLTLA*SGFQLL Trigger: GAGTAACTGGAACCCTGAGCATGCCAGGGTCAAGTA...AAAGTGGGAACCTACAAGGAATACAGTGCTGACACAGAGTAAGATTTCAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CCA 90 bp | ATCATGATAACAACAGAGATGAGATCAGGCACAGAGAGTGAGCTAGTGAGTGAAATAGTTTTCCCTAGATaGACCCAGGACAACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IMITTEMRSGTESELVSEIVFPR*TQDNRY Trigger: GTACCTGTTGTCCTGGGTCCATCTAGGGAAAACTAT...TTCACTCACTAGCTCACTCTCTGTGCCTGATCTCATCTCTGTTGTTATCATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTGGCACCCTTGGATATTaGACATTGCTTGGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISGTLGY*TLLGRM Trigger: CATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCC...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTGCTCGTTGTAATACTTaGCCCTGGCATGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSARCNT*PWHAQG Trigger: ACCCTGAGCATGCCAGGGTCAAGTATTACAACGAGC...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAAGTAAGGTCAAAGGTCTaGCCAAATGGCCATACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQVRSKV*PNGHTQ Trigger: TTGGGTATGGCCATTTGGGCAGACCTTTGACCTTAC...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTTACTTGACCCTGGCATaGTCAGGGTTCCAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISYLTLA*SGFQLL Trigger: GAGTAACTGGAACCCTGAGCATGCCAGGGTCAAGTA...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTACTTGCAGACTCCATTaGACTGAAGACCCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTLKLYIPVDEGTRHASTTCRLH*TEDPAV Trigger: AACAGCTGGGTCTTCAGTCCAATGGAGTCTGCAAGT...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGTGGCAGTTGGGGATCAACAATATCACCTGTGTAACTATGTCTTTAAAAAAGGTCTGCCCAAATaGCCATACCCAAACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVAVGDQQYHLCNYVFKKGLPK*PYPNQN Trigger: ATTCTGGTTTGGGTATGGCCATTTGGGCAGACCTTT...TTTAAAGACATAGTTACACAGGTGATATTGTTGATCCCCAACTGCCACAGAGGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTGGCACCCTTGGATATTaGACATTGCTTGGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSGTLGY*TLLGRM Trigger: CATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCC...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAAGGATTTGTTGTACAATaGGCGGTCTGTTGTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQGFVVQ*AVCCEM Trigger: CATCTCACAACAGACCGCTCATTGTACAACAAATCC...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | TGGTACATTTTCCACTCACACATAGTGAAGCTCATTCCTTCTGCTAAAGTTCAAACACAAAGGGATTTGTaGTCACCGTCAAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WYIFHSHIVKLIPSAKVQTQRDL*SPSRSH Trigger: ATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGT...TTGAACTTTAGCAGAAGGAATGAGCTTCACTATGTGTGAGTGGAAAATGTACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CCA 90 bp | CATATTGAAATCTTACTCTGTGTCAGCACTGTATTCCTTGTAGGTTCCCACTTTGTGAGATGGCACCCTTaGATATTGAACATTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIEILLCVSTVFLVGSHFVRWHP*ILNIAW Trigger: CCAAGCAATGTTCAATATCCAAGGGTGCCATCTCAC...AAAGTGGGAACCTACAAGGAATACAGTGCTGACACAGAGTAAGATTTCAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | ATCATGATAACAACAGAGATGAGATCAGGCACAGAGAGTGAGCTAGTGAGTGAAACAGACTTATATTCTTaGTGCCTTTTTACATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IMITTEMRSGTESELVSETDLYS*CLFTWS Trigger: CGACCATGTAAAAAGGCATCAAGAATATAAGTCTGT...TTCACTCACTAGCTCACTCTCTGTGCCTGATCTCATCTCTGTTGTTATCATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCTGTGGCAGTTGGGGATCAACAATATCACCTGTGTAACTATGTCTTTAAATTGGATATTGAACATTaGTTGGCAGGATGTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVAVGDQQYHLCNYVFKLDIEH*LAGCKV Trigger: GACCTTACATCCTGCCAAGCAATGTTCAATATCCAA...TTTAAAGACATAGTTACACAGGTGATATTGTTGATCCCCAACTGCCACAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTACACAAAGGGATTTGTaGTCACCGTCAAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISTQRDL*SPSRSH Trigger: ATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTACTTGCAGACTCCATTaGACTGAAGACCCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSTCRLH*TEDPAV Trigger: AACAGCTGGGTCTTCAGTCCAATGGAGTCTGCAAGT...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTGTGAGATGGCACCCTTaGATATTGAACATTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISVRWHP*ILNIAW Trigger: CCAAGCAATGTTCAATATCCAAGGGTGCCATCTCAC...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTCAACTTCTCCTTGCTTaGCACTTCAAACACAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISQLLLA*HFKHKG Trigger: CCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTG...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTATAGTTTTCCCTAGATaGACCCAGGACAACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISIVFPR*TQDNRY Trigger: GTACCTGTTGTCCTGGGTCCATCTAGGGAAAACTAT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTAAGTTAGAGTCAGGTTaGACAAGTGTTCAATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISKLESG*TSVQCH Trigger: GTGGCATTGAACACTTGTTCAACCTGACTCTAACTT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTGAAATGGGCGAAGAATaGCTTTGGATGTTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISEMGEE*LWMLMS Trigger: TGACATCAACATCCAAAGGCATTCTTCGCCCATTTC...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATGCTTTCCAGCTTTCACTGAGAGCATATTCTAAATTTAGCAATCCATGCTTTCAGCACAGAACTTaGAGACTCCATTGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNAFQLSLRAYSKFSNPCFQHRT*RLHWTE Trigger: TTCAGTCCAATGGAGTCTGCAAGTTCTGTGCTGAAA...GCATGGATTGCTAAATTTAGAATATGCTCTCAGTGAAAGCTGGAAAGCATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR GCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTTTTCAGCACAGAACTTaGAGACTCCATTGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISFQHRT*RLHWTE Trigger: TTCAGTCCAATGGAGTCTGCAAGTTCTGTGCTGAAA...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAGGTCTGCCCAAATaGCCATACCCAAACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSKGLPK*PYPNQN Trigger: ATTCTGGTTTGGGTATGGCCATTTGGGCAGACCTTT...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTCAACTTCTCCTTGCTTaGCACTTCAAACACAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSQLLLA*HFKHKG Trigger: CCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTG...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTACACCAACTTCTCCTTaGTTGGCACTTCAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSTPTSP*LALQTQ Trigger: TTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGT...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CCA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTATATTGAACATTGCTTaGCAGGATGTAAGGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTLKLYIPVDEGTRHASTILNIA*QDVRSK Trigger: CTTTGACCTTACATCCTGCCAAGCAATGTTCAATAT...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CAA 72 bp | TGTGAAATACTTAATACCTTGGCTTGGCTTACACTATaGGCATTTAATTGTACTTCCAGTCCAAGAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEILNTLAWLTL*AFNCTSSPRMS Trigger: GCTCATTCTTGGACTGGAAGTACAATTAAATGCCAATAGTGTAAGCCAAGCCAAGGTATTAAGTATTTCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CAA 72 bp | GATGTTTGCAGTATGTTCACTATACAACAAATCAAATaGGCAAGAATGAAGGGTAAATCTGTTTCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVCSMFTIQQIK*ARMKGKSVSLP Trigger: GGGGAGAGAAACAGATTTACCCTTCATTCTTGCCAATTTGATTTGTTGTATAGTGAACATACTGCAAACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CAA 72 bp | AGACTCGGGAAAGAAATTGATCAAATATGTGCAATTTaGATGGCTGCAAGAGAACCTAATAATTGCCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGKEIDQICAI*MAAREPNNCLP Trigger: AGGTAGGCAATTATTAGGTTCTCTTGCAGCCATCAAAATTGCACATATTTGATCAATTTCTTTCCCGAGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CAA 72 bp | TTACACTATAGGTGCTGGGAGCTAAACGGATGGACTTaGATTATGAGTCTGTTTCACATTTTCTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHYRCWELNGWT*IMSLFHIFLFL Trigger: AAGAAACAAGAAAATGTGAAACAGACTCATAATCAAAGTCCATCCGTTTAGCTCCCAGCACCTATAGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTACAGACTTATATTCTTaGTGCCTTTTTACATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLAPLHKCGTSKNSISTDLYS*CLFTWS Trigger: CGACCATGTAAAAAGGCATCAAGAATATAAGTCTGT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR GCA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTTTGGATATTGAACATTaGTTGGCAGGATGTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSLDIEH*LAGCKV Trigger: GACCTTACATCCTGCCAAGCAATGTTCAATATCCAA...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| 3UTR CAA 72 bp | AATCTGTTTCTCTCCCCACAGTTTGGTAATACACATTaGCCTATCCTGATGCTTCATTTTTCAATTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLFLSPQFGNTH*PILMLHFSILF Trigger: AAAGAGAATTGAAAAATGAAGCATCAGGATAGGCAAATGTGTATTACCAAACTGTGGGGAGAGAAACAGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| 3UTR CAA 72 bp | CCTAAGCCAACAGTTGACATGAAATATTTAGTCAAGTaGATGGATATTTCTAAGGGCAATTTCCTCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKPTVDMKYLVK*MDISKGNFLTR Trigger: TCTAGTGAGGAAATTGCCCTTAGAAATATCCATCAACTTGACTAAATATTTCATGTCAACTGTTGGCTTAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS GCA 90 bp | GCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAACTTCTCCTTaGTTGGCACTTCAAACACAAAGGGATTTGTGCTCACCGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQGSSYSQPSTPTSP*LALQTQRDLCSPSR Trigger: TCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAACTGGAACCCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CCA 90 bp | GAGCGGTCTGTTGTGAGATGGCACCCTTGGATATTGAACATTGCTTaGCAGGATGTAAGGTCAAAGGTCTGCCCAAATGGCCATACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERSVVRWHPWILNIA*QDVRSKVCPNGHTQ Trigger: TTGGGTATGGCCATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CCA 90 bp | AGGGTTCCAGTTACTCACAACCCAGCACACCAACTTCTCCTTGCTTaGCACTTCAAACACAAAGGGATTTGTGCTCACCGTCAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVPVTHNPAHQLLLA*HFKHKGICAHRQEA Trigger: GGCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAACTGGAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CCA 90 bp | AGGACCGCATGGGATTTGTTGTACAATGAGCGGTCTGTTGTGAGATaGCACCCTTGGATATTGAACATTGCTTGGCAGGATGTAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTAWDLLYNERSVVR*HPWILNIAWQDVRS Trigger: TGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAAATCCCATGCGGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS TCA 90 bp | GATGTCTCTATGGTGAATCAGGACCGCATGGGATTTGTTGTACAATaGGCGGTCTGTTGTGAGATGGCACCCTTGGATATTGAACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVSMVNQDRMGFVVQ*AVCCEMAPLDIEHC Trigger: GCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAAATCCCATGCGGTCCTGATTCACCATAGAGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CCA 90 bp | TGGGATTTGTTGTACAATGAGCGGTCTGTTGTGAGATGGCACCCTTaGATATTGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WDLLYNERSVVRWHP*ILNIAWQDVRSKVC Trigger: GCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAAATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS GCA 90 bp | ACACCAACTTCTCCTTGCTTGGCACTTCAAACACAAAGGGATTTGTaGTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TPTSPCLALQTQRDL*SPSRSHKALGYLNH Trigger: GTGATTCAGATATCCAAGTGCCTTATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCCTTTCCATGGCAGAGTAGGCTGCTCTTCGTTTGAATCAATGTTTTATCAAACACAAAGGGATTaGTGCTCACCGTCAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPFHGRVGCSSFESMFYQTQRD*CSPSRS Trigger: GCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTG...ATAAAACATTGATTCAAACGAAGAGCAGCCTACTCTGCCATGGAAAGGGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CAA 90 bp | ATCAAATTTCCCCCTTACCCTTCCCTACCACTCATTGAACAAAGCCCCCTAGAACTTCCTTCAGATATTTaGCTAACTCACTGGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IKFPPYPSLPLIEQSPLELPSDI*LTHWES Trigger: ACTCTCCCAGTGAGTTAGCAAAATATCTGAAGGAAG...TTCTAGGGGGCTTTGTTCAATGAGTGGTAGGGAAGGGTAAGGGGGAAATTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS GCA 90 bp | CCTTGGATATTGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTaGCCAAATGGCCATACCCAAACCAGAATGGTAGTTTCGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PWILNIAWQDVRSKV*PNGHTQTRMVVSLK Trigger: TTTTAACGAAACTACCATTCTGGTTTGGGTATGGCCATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS GCA 90 bp | AGATATGGTGGGAATCAGATTTTTATCGTTCACGTATTCTCCGAATaGTTGGCCATAGGTGTGGATTTCAATACTCTTGCTGAGCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RYGGNQIFIVHVFSE*LAIGVDFNTLAELV Trigger: AACGAGCTCAGCAAGAGTATTGAAATCCACACCTATGGCCAAGCATTCGGAGAATACGTGAACGATAAAAATCTGATTCCCACCATATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | CATATTGAAATCTTACTCTGTGTCAGCACTGTATTCCTTGTAGGTTCCCACTTTTGGCACCCTTGGATATaGAACATTGCTTGGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIEILLCVSTVFLVGSHFWHPWI*NIAWQD Trigger: ATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCA...AAAGTGGGAACCTACAAGGAATACAGTGCTGACACAGAGTAAGATTTCAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CAA 90 bp | CATATTGAAATCTTACTCTGTGTCAGCACTGTATTCCTTGTAGGTTCCCACTTTACCGCATGGGATTTGTaGTACAATGAGCGGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIEILLCVSTVFLVGSHFTAWDL*YNERSV Trigger: AACAGACCGCTCATTGTACAACAAATCCCATGCGGT...AAAGTGGGAACCTACAAGGAATACAGTGCTGACACAGAGTAAGATTTCAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CAA 90 bp | TATACACTCAAACTCTATATTCCTGTTGATGAAGGAACTCGACATGCTTCCACTCCAACTTCTCCTTGCTaGGCACTTCAAACACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTLKLYIPVDEGTRHASTPTSPC*ALQTQR Trigger: CCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGG...AGTGGAAGCATGTCGAGTTCCTTCATCAACAGGAATATAGAGTTTGAGTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CAA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTTGGCACCCTTGGATATaGAACATTGCTTGGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHQLAPLHKCGTSKNSISWHPWI*NIAWQD Trigger: ATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCA...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | CATATTGAAATCTTACTCTGTGTCAGCACTGTATTCCTTGTAGGTTCCCACTTTTGTGAGATGGCACCCTaGGATATTGAACATTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIEILLCVSTVFLVGSHFCEMAP*DIEHCL Trigger: CAAGCAATGTTCAATATCCAAGGGTGCCATCTCACA...AAAGTGGGAACCTACAAGGAATACAGTGCTGACACAGAGTAAGATTTCAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084770.5 |
||
| CDS-3UTR CAA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTACCGCATGGGATTTGTaGTACAATGAGCGGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHQLAPLHKCGTSKNSISTAWDL*YNERSV Trigger: AACAGACCGCTCATTGTACAACAAATCCCATGCGGT...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTCCAACTTCTCCTTGCTaGGCACTTCAAACACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHQLAPLHKCGTSKNSISPTSPC*ALQTQR Trigger: CCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGG...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTCAAACACAAAGGGATTaGTGCTCACCGTCAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSQTQRD*CSPSRS Trigger: GCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTG...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTCTTCCTTCAGATATTTaGCTAACTCACTGGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHQLAPLHKCGTSKNSISLPSDI*LTHWES Trigger: ACTCTCCCAGTGAGTTAGCAAAATATCTGAAGGAAG...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | CTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTAAAAACTCTATCAGTGATATTGAACATTGCTaGGCAGGATGTAAGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHQLAPLHKCGTSKNSISDIEHC*AGCKVK Trigger: TTTGACCTTACATCCTGCCAAGCAATGTTCAATATC...ACTGATAGAGTTTTTACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTTCTTATTTGCTACATCAATTAGCTCCCCTTCACAAATGTGGTACAAGTGATATTGAACATTGCTaGGCAGGATGTAAGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLSYLLHQLAPLHKCGTSDIEHC*AGCKVK Trigger: TTTGACCTTACATCCTGCCAAGCAATGTTCAATATC...ACTTGTACCACATTTGTGAAGGGGAGCTAATTGATGTAGCAAATAAGAAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CAA 90 bp | CAGGGTTCCAGTTACTCACAACCCAGCACACCAACTTCTCCTTGCTaGGCACTTCAAACACAAAGGGATTTGTGCTCACCGTCAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSSYSQPSTPTSPC*ALQTQRDLCSPSRS Trigger: GCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAACTGGAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CAA 90 bp | TGCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAACTTCTCCTaGCTTGGCACTTCAAACACAAAGGGATTTGTGCTCACCGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSGFQLLTTQHTNFS*LGTSNTKGFVLTVK Trigger: CTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAACTGGAACCCTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
||
| CDS CCA 72 bp | GTTACTCACAACCCAGCACACCAACTTCTCCTTGCTTaGCACTTCAAACACAAAGGGATTTGTGCTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: VTHNPAHQLLLA*HFKHKGICAHR Trigger: ACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS TCA 72 bp | ATGGTGAATCAGGACCGCATGGGATTTGTTGTACAATaGGCGGTCTGTTGTGAGATGGCACCCTTGGATATT | + |
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Preference number: 6 (lower is better) Translates to: MVNQDRMGFVVQ*AVCCEMAPLDI Trigger: AATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAAATCCCATGCGGTCCTGATTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS GCA 72 bp | GTCTGTTGTGAGATGGCACCCTTGGATATTGAACATTaGTTGGCAGGATGTAAGGTCAAAGGTCTGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VCCEMAPLDIEH*LAGCKVKGLPK Trigger: TTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS GCA 72 bp | TCCAGTTACTCACAACCCAGCACACCAACTTCTCCTTaGTTGGCACTTCAAACACAAAGGGATTTGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSYSQPSTPTSP*LALQTQRDLCS Trigger: TGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCTGGGTTGTGAGTAACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CAA 72 bp | ACTTCTCCTTGCTTGGCACTTCAAACACAAAGGGATTaGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TSPCLALQTQRD*CSPSRSHKALG Trigger: TCCAAGTGCCTTATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CAA 90 bp | TTGTTGTACAATGAGCGGTCTGTTGTGAGATGGCACCCTTGGATATaGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTGCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LLYNERSVVRWHPWI*NIAWQDVRSKVCPN Trigger: ATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CAA 90 bp | AGCACACCAACTTCTCCTTGCTTGGCACTTCAAACACAAAGGGATTaGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: STPTSPCLALQTQRD*CSPSRSHKALGYLN Trigger: ATTCAGATATCCAAGTGCCTTATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGAAGTTGGTGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS TCA 72 bp | GGTAAGTTAGTCAGATCCCAGCTGATGTCTCTATGGTaGATCAGGACCGCATGGGATTTGTTGTACAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GKLVRSQLMSLW*IRTAWDLLYNE Trigger: CTCATTGTACAACAAATCCCATGCGGTCCTGATTCACCATAGAGACATCAGCTGGGATCTGACTAACTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS GCA 72 bp | TTGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTaGCCAAATGGCCATACCCAAACCAGAATGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LNIAWQDVRSKV*PNGHTQTRMVV Trigger: AACTACCATTCTGGTTTGGGTATGGCCATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS GCA 72 bp | TCTCCTTGCTTGGCACTTCAAACACAAAGGGATTTGTaGTCACCGTCAAGAAGCCATAAGGCACTTGGATAT | + |
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Preference number: 6 (lower is better) Translates to: SPCLALQTQRDL*SPSRSHKALGY Trigger: ATATCCAAGTGCCTTATGGCTTCTTGACGGTGAGCACAAATCCCTTTGTGTTTGAAGTGCCAAGCAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CCA 72 bp | TGCTTGGCAGGATGTAAGGTCAAAGGTCTGCCCAAATaGCCATACCCAAACCAGAATGGTAGTTTCGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: CLAGCKVKGLPK*PYPNQNGSFVK Trigger: TTTAACGAAACTACCATTCTGGTTTGGGTATGGCCATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CCA 72 bp | TTGTACAATGAGCGGTCTGTTGTGAGATGGCACCCTTaGATATTGAACATTGCTTGGCAGGATGTAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LYNERSVVRWHP*ILNIAWQDVRS Trigger: TGACCTTACATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CCA 72 bp | TGGGATTTGTTGTACAATGAGCGGTCTGTTGTGAGATaGCACCCTTGGATATTGAACATTGCTTGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WDLLYNERSVVR*HPWILNIAWQD Trigger: ATCCTGCCAAGCAATGTTCAATATCCAAGGGTGCCATCTCACAACAGACCGCTCATTGTACAACAAATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CAA 90 bp | TATGGTGGGAATCAGATTTTTATCGTTCACGTATTCTCCGAATGCTaGGCCATAGGTGTGGATTTCAATACTCTTGCTGAGCTCGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: YGGNQIFIVHVFSEC*AIGVDFNTLAELVV Trigger: TACAACGAGCTCAGCAAGAGTATTGAAATCCACACCTATGGCCAAGCATTCGGAGAATACGTGAACGATAAAAATCTGATTCCCACCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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| CDS CAA 72 bp | AATCAGATTTTTATCGTTCACGTATTCTCCGAATGCTaGGCCATAGGTGTGGATTTCAATACTCTTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: NQIFIVHVFSEC*AIGVDFNTLAE Trigger: CTCAGCAAGAGTATTGAAATCCACACCTATGGCCAAGCATTCGGAGAATACGTGAACGATAAAAATCTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084770.5 ENSMUST00000108199.2 |
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