Pregenerated sensors for FUT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055978Ensembl transcript IDs: ENSMUST00000069800.6, ENSMUST00000210620.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACAGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTaGCCTGGCCTTTGGTCCACTGTCGGTGAGACCTTCGGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GTEELAGCLERCGFH*PGLWSTVGETFGRQ Trigger: CTGCCTCCCGAAGGTCTCACCGACAGTGGACCAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 90 bp | AAAAAGAGCAAGCCAGCCTCCTCTCCTTTCTCAGGCTTCCTTACATaGTTATTGCCTGTCGCATGCTGCCCCGCCATGGAAATGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: KKSKPASSPFSGFLT*LLPVACCPAMEMLM Trigger: CATTAGCATTTCCATGGCGGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGAGGCTGGCTTGCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 90 bp | CCAGCTGCTTATGATTCCAGTTCCCAGGAACCCAACGCCCAGGTCTaGCCTCTGAAGGTACTGCACACACCCACATATATATCCATAATT | + |
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Preference number: 1 (lower is better) Translates to: PAAYDSSSQEPNAQV*PLKVLHTPTYISII Trigger: AATTATGGATATATATGTGGGTGTGTGCAGTACCTTCAGAGGCCAGACCTGGGCGTTGGGTTCCTGGGAACTGGAATCATAAGCAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 90 bp | TTGTATCTAACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTaGCAGTCCAAGGCACACATCTTCCCAGTAGAAGGCCCTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LYLTCNTFSAHISSR*QSKAHIFPVEGPSW Trigger: CCAGGAAGGGCCTTCTACTGGGAAGATGTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGTTAGATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTGGAAGAGACTGTCTGTaGGTGGCAGCCCGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSGRDCL*VAARLA Trigger: TGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCC...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGCCCAGGTCTGGCCTCTaGAGGTACTGCACACACCCA | + |
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Preference number: 2 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLPRSGL*RYCTHP Trigger: TGGGTGTGTGCAGTACCTTCAGAGGCCAGACCTGGG...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCTGCCTCTGGAAGAGACTGTCTGTGGGTGGCAGCCCGGCTGGCACCATCCTTCTGCCTTGAGATaGAAATGGGACCAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: FLLPLEETVCGWQPGWHHPSALR*KWDQGQ Trigger: CTGTCCTTGGTCCCATTTCCATCTCAAGGCAGAAGG...ATGGTGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGAGAGCCAGCTGCTTATaGTTCCAGTTCCCAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLRASCL*FQFPGT Trigger: GGTTCCTGGGAACTGGAATCATAAGCAGCTGGCTCT...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGGCCTTGAGATGGAAATaGGACCAAGGACAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLALRWK*DQGQAG Trigger: ACCAGCCTGTCCTTGGTCCCATTTCCATCTCAAGGC...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCAAGGTGTGGCTTTCACTaGCCTGGCCTTTGGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPRCGFH*PGLWST Trigger: AGTGGACCAAAGGCCAGGCCAGTGAAAGCCACACCT...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR GCA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTCACACCTTTTCTTGCTaGCTCTGGAAGAGACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSHTFSC*LWKRLS Trigger: AGACAGTCTCTTCCAGAGGCAGCAAGAAAAGGTGTG...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTTTTTCTTGCTGCCTCTaGAAGAGACTGTCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSFSCCL*KRLSVG Trigger: ACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAAAA...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCAAGCTGGCTGGATGCTTaGAGAGGTGTGGCTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPSWLDA*RGVAFT Trigger: AGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCT...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CAA 90 bp | CAGACTGGTCTGCCATTCCGTGTAGCTGTGGATGACTTCCAACTCTaGATCTTTCTGCACTTACCTAATGCTGGGACCACCGCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QTGLPFRVAVDDFQL*IFLHLPNAGTTAVH Trigger: GTGCACAGCGGTGGTCCCAGCATTAGGTAAGTGCAGAAAGATCAAGAGTTGGAAGTCATCCACAGCTACACGGAATGGCAGACCAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGCTGCCTCTGGAAGAGACTGTCTGTGGGTGGCAGCCCGGCTGGCACCATGCCATTGATAATGTCTaGGCTGTTAATGAATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: FLLPLEETVCGWQPGWHHAIDNV*AVNECW Trigger: CCAACATTCATTAACAGCTCAGACATTATCAATGGC...ATGGTGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CAA 90 bp | AGCAAGCCAGCCTCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATaGCCTGTCGCATGCTGCCCCGCCATGGAAATGCTAATGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: SKPASSPFSGFLTWL*PVACCPAMEMLMTK Trigger: TTTTGTCATTAGCATTTCCATGGCGGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGAGGCTGGCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCAACTCCTGTCAGTTGGTaGAAAGCAGTTGCTATAAAA | + |
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Preference number: 2 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPTPVSW*KAVAIK Trigger: TTTTATAGCAACTGCTTTTCACCAACTGACAGGAGT...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR GCA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACCCAAGTGACTCCTTCTaGCTTGAGATGGAAATGGGA | + |
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Preference number: 2 (lower is better) Translates to: TCNTFSAHISSRWQSKAHPSDSF*LEMEMG Trigger: TCCCATTTCCATCTCAAGGCAGAAGGAGTCACTTGG...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR TCA 72 bp | TCGGTGAGACCTTCGGGAGGCAGAGCCAGCTGCTTATaGTTCCAGTTCCCAGGAACCCAACGCCCAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SVRPSGGRASCL*FQFPGTQRPGL Trigger: CAGACCTGGGCGTTGGGTTCCTGGGAACTGGAATCATAAGCAGCTGGCTCTGCCTCCCGAAGGTCTCACCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | GAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTaGCCTGGCCTTTGGTCCACTGTCGGTGAGACCTTC | + |
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Preference number: 3 (lower is better) Translates to: ELAGCLERCGFH*PGLWSTVGETF Trigger: GAAGGTCTCACCGACAGTGGACCAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR TCA 72 bp | TGGCTTTCACTGGCCTGGCCTTTGGTCCACTGTCGGTaGGACCTTCGGGAGGCAGAGCCAGCTGCTTATGAT | + |
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Preference number: 3 (lower is better) Translates to: WLSLAWPLVHCR*DLREAEPAAYD Trigger: ATCATAAGCAGCTGGCTCTGCCTCCCGAAGGTCTCACCGACAGTGGACCAAAGGCCAGGCCAGTGAAAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | TGCCTTAGCCTTCACAGTGCAAGGATGAAAGGCAGGTaGCACCGTGGCCACTCCAGGCTACTTCTCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: CLSLHSARMKGR*HRGHSRLLLMH Trigger: GTGCATGAGAAGTAGCCTGGAGTGGCCACGGTGGCACCTGCCTTTCATCCTTGCACTGTGAAGGCTAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | CTCTTGTCAAGGGGACAGAAGAGCTGGCTGGATGCTTaGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LLSRGQKSWLDA*RGVAFTGLAFG Trigger: ACCAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTCCCCTTGACAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | CCTTCACAGTGCAAGGATGAAAGGCAGGTGCCACCGTaGCCACTCCAGGCTACTTCTCATGCACAGGATCAG | + |
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Preference number: 3 (lower is better) Translates to: PSQCKDERQVPP*PLQATSHAQDQ Trigger: CTGATCCTGTGCATGAGAAGTAGCCTGGAGTGGCCACGGTGGCACCTGCCTTTCATCCTTGCACTGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CAA 90 bp | GACAGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTGTGACTCCTTCTGCCTaGAGATGGAAATGGGACCAA | + |
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Preference number: 3 (lower is better) Translates to: DRRAGWMLGEVWLSLAWPVTPSA*RWKWDQ Trigger: TTGGTCCCATTTCCATCTCAAGGCAGAAGGAGTCAC...AGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | ACAACTCTTGTCAAGGGGACAGAAGAGCTGGCTGGATaGTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: TTLVKGTEELAG*LERCGFHWPGL Trigger: AAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTCCCCTTGACAAGAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | ACGGTGACACAACTCTTGTCAAGGGGACAGAAGAGCTaGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: TVTQLLSRGQKS*LDAWRGVAFTG Trigger: GCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTCCCCTTGACAAGAGTTGTGTCACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CAA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTGCAGACTCCTGTCAGTaGGTGAAAAGCAGTTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSADSCQ*VKSSCY Trigger: ATAGCAACTGCTTTTCACCAACTGACAGGAGTCTGC...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | TCCAAGGCACACATCTTCCCAGTAGAAGGCCCTTCCTaGGATGTACCAAGTGACTCCTTCTGCCTTGAGATG | + |
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Preference number: 3 (lower is better) Translates to: SKAHIFPVEGPS*DVPSDSFCLEM Trigger: CATCTCAAGGCAGAAGGAGTCACTTGGTACATCCCAGGAAGGGCCTTCTACTGGGAAGATGTGTGCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR TCA 72 bp | GGTGTCCGGCCAGGGCTACAGAAGTGGACATGCATCTaGATTCTACTCACTCAGTTCTTCTCAGATGGACAG | + |
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Preference number: 3 (lower is better) Translates to: GVRPGLQKWTCI*ILLTQFFSDGQ Trigger: CTGTCCATCTGAGAAGAACTGAGTGAGTAGAATTCAGATGCATGTCCACTTCTGTAGCCCTGGCCGGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | TATGATTCCAGTTCCCAGGAACCCAACGCCCAGGTCTaGCCTCTGAAGGTACTGCACACACCCACATATATA | + |
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Preference number: 3 (lower is better) Translates to: YDSSSQEPNAQV*PLKVLHTPTYI Trigger: TATATATGTGGGTGTGTGCAGTACCTTCAGAGGCCAGACCTGGGCGTTGGGTTCCTGGGAACTGGAATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGTGTATAAACAAGAGTTaGCCTTACCCTTCAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLCINKS*PYPSKG Trigger: TCCTTTTGAAGGGTAAGGCAAACTCTTGTTTATACA...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR TCA 72 bp | GGGGTTAGCAGTTCTCAGCAGACTCCTGTCAGTTGGTaGAAAGCAGTTGCTATAAAAAGAGCAAGCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GVSSSQQTPVSW*KAVAIKRASQP Trigger: AGGCTGGCTTGCTCTTTTTATAGCAACTGCTTTTCACCAACTGACAGGAGTCTGCTGAGAACTGCTAACCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | TCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTaGCCCGCCATGGAAATGCTAATGACAAAAAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: SGFLTWLLPVAC*PAMEMLMTKSV Trigger: TACACTTTTTGTCATTAGCATTTCCATGGCGGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | TTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATaGTGCCCCGCCATGGAAATGCTAATGACAAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: FSGFLTWLLPVA*CPAMEMLMTKS Trigger: ACTTTTTGTCATTAGCATTTCCATGGCGGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | TTCTCAGCAGACTCCTGTCAGTTGGTGAAAAGCAGTTaGTATAAAAAGAGCAAGCCAGCCTCCTCTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: FSADSCQLVKSS*YKKSKPASSPF Trigger: GAAAGGAGAGGAGGCTGGCTTGCTCTTTTTATAGCAACTGCTTTTCACCAACTGACAGGAGTCTGCTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CCA 72 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTaGCAGTCCAAGGCACACATCTTCCCAGTAGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: TCNTFSAHISSR*QSKAHIFPVEG Trigger: GCCTTCTACTGGGAAGATGTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR GCA 72 bp | TCTTTCTGCACTTACCTAATGCTGGGACCACCGCTGTaGACCACTATACCCAGTTTGAGAATTTTATCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SFCTYLMLGPPL*TTIPSLRILSF Trigger: AAAAGATAAAATTCTCAAACTGGGTATAGTGGTGCACAGCGGTGGTCCCAGCATTAGGTAAGTGCAGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR GCA 90 bp | TTCTTGCTGCCTCTGGAAGAGACTGTCTGTGGGTGGCAGCCCGGCTGGCACCATGAGTGGGGACAGGTCTaGGGGGATGCCCATCCACTC | + |
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Preference number: 4 (lower is better) Translates to: FLLPLEETVCGWQPGWHHEWGQV*GDAHPL Trigger: GAGTGGATGGGCATCCCCGCAGACCTGTCCCCACTC...ATGGTGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTGGAGCGCGAAGTCCTTaGCTGGTGAGCCCTCAATAC | + |
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Preference number: 4 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSGARSP*LVSPQY Trigger: GTATTGAGGGCTCACCAGCCAAGGACTTCGCGCTCC...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR TCA 90 bp | GACAGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTCCACACCTTGGGCATaGCATGCACATAGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DRRAGWMLGEVWLSLAWPSTPWA*HAHSPL Trigger: GAGGGGACTATGTGCATGTCATGCCCAAGGTGTGGA...AGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR TCA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCATGTGGTTGCACTGGGTaGGGAGCGCGAAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPCGCTG*GARSPW Trigger: CCAAGGACTTCGCGCTCCTCACCCAGTGCAACCACA...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGTCCCCTCGGCGCACATaGACACCCACAAAGGTACTC | + |
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Preference number: 4 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLSPRRT*TPTKVL Trigger: GAGTACCTTTGTGGGTGTCCATGTGCGCCGAGGGGA...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CAA 72 bp | ATGGACAGAGTAGGCAAAGTCCCAAGGACAAGCAACTaGGTGAGGGGACTGTGGGTCCACGGTAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: MDRVGKVPRTSN*VRGLWVHGSSR Trigger: GCGGGAGCTACCGTGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR TCA 90 bp | TCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCCCCTCCTAGGGAGGTGTTaGTGTTCTCCCGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSPFSGFLTWLLPVACCPLLGRC*CSPGTR Trigger: CCTGGTGCCGGGAGAACATCAACACCTCCCTAGGAG...GGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR TCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGGAAGTCCTTGGCTGGTaGGCCCTCAATACCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLEVLGW*ALNTIA Trigger: GGCAATGGTATTGAGGGCTCACCAGCCAAGGACTTC...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR GCA 90 bp | GACAGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTAGCCCTCAATACCATTaGCCGCAAACACCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DRRAGWMLGEVWLSLAWPSPQYH*PQTPRL Trigger: GAGACGTGGTGTTTGCGGGCAATGGTATTGAGGGCT...AGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | AAACATCTGGAGGAGTTCCCTAGGCCTGGGGTGTCCGGCCAGGGCTACAGAAGTATATGCCCTGCAGCTTaGCACTCTGCTGCATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KHLEEFPRPGVSGQGYRSICPAA*HSAACL Trigger: CAGACATGCAGCAGAGTGCCAAGCTGCAGGGCATAT...ACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | TTCTTGCTGCCTCTGGAAGAGACTGTCTGTGGGTGGCAGCCCGGCTGGCACCATCCGGAAGGGTGTAGTTaGCTAGGTAGATGGTATCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLPLEETVCGWQPGWHHPEGCS*LGRWYH Trigger: GTGATACCATCTACCTAGCCAACTACACCCTTCCGG...ATGGTGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CAA 72 bp | GGGGACTGTGGGTCCACGGTAGCTCCCGCATCCCTTTaGATCTGTGCAGTGAAGAACTCCTATTTTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GDCGSTVAPASL*ICAVKNSYFGS Trigger: GGATCCAAAATAGGAGTTCTTCACTGCACAGATCAAAAGGGATGCGGGAGCTACCGTGGACCCACAGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR GCA 90 bp | TCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCCCATCGTGAATATGCCCTaGAGCTTGGCACTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSPFSGFLTWLLPVACCPIVNMP*SLALCC Trigger: GCAGCAGAGTGCCAAGCTGCAGGGCATATTCACGAT...GGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGATTCGTTGCTGGAGGTaGATGATGGTGGAAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLIRCWR*MMVEVT Trigger: TGTGACTTCCACCATCATCCACCTCCAGCAACGAAT...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCCCATGGTCATGATGGTGTaGTTGCACTGGGTGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPFSGFLTWLLPVACCPMVMMV*LHWVRS Trigger: GCTCCTCACCCAGTGCAACCACACCATCATGACCAT...GGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCTCACAAAGACAAAGATaGGGAAGTGGGCCAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PPLLSQASLHGYCLSHAASQRQR*GSGPEE Trigger: TTCCTCTGGCCCACTTCCTCATCTTTGTCTTTGTGA...GGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCATTCTCTGACAGGGTTTaGAGCTTCACTATTCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPFSDRV*SFTIRC Trigger: GCAACGAATAGTGAAGCTCCAAACCCTGTCAGAGAA...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACTTAGTGCTTAAGGAGTaGGGACAGGTCTGCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TCNTFSAHISSRWQSKAHLVLKE*GQVCGD Trigger: ATCCCCGCAGACCTGTCCCCACTCCTTAAGCACTAA...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR GCA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACCTCGGGGAGGAAGGCTaGTGCTGGCTTAAAGATTTT | + |
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Preference number: 4 (lower is better) Translates to: TCNTFSAHISSRWQSKAHLGEEG*CWLKDF Trigger: AAAATCTTTAAGCCAGCAGCAGCCTTCCTCCCCGAG...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| 3UTR CAA 72 bp | AAGGAACCTAAAGTAAAATCGATAACACACCTTTTCTaGCTGCCTCTGGAAGAGACTGTCTGTGGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KEPKVKSITHLF*LPLEETVCGWQ Trigger: CTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAAAAGGTGTGTTATCGATTTTACTTTAGGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACTTCACTATTCGTTGCTaGAGGTGGATGATGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TCNTFSAHISSRWQSKAHFTIRC*RWMMVE Trigger: TTCCACCATCATCCACCTCCAGCAACGAATAGTGAA...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CCA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACGAGGAAGGCTGCTGCTaGCTTAAAGATTTTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TCNTFSAHISSRWQSKAHEEGCC*LKDFEE Trigger: TTCCTCAAAATCTTTAAGCCAGCAGCAGCCTTCCTC...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CAA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCAATGGGCGCTAGAGCGTaGTGCATGGATTCAGGGATG | + |
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Preference number: 5 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPMGARA*CMDSGM Trigger: CATCCCTGAATCCATGCACAACGCTCTAGCGCCCAT...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CAA 90 bp | CAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCAGAGCTTCACTATTCGTaGCTGGAGGTGGATGATGGT | + |
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Preference number: 5 (lower is better) Translates to: QSRQSPKDKQLGEGTVGPELHYS*LEVDDG Trigger: ACCATCATCCACCTCCAGCAACGAATAGTGAAGCTC...TGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCAATATGCCCTGCAGCTaGGCACTCTGCTGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: PPLLSQASLHGYCLSHAANMPCS*ALCCMS Trigger: AGACATGCAGCAGAGTGCCAAGCTGCAGGGCATATT...GGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CAA 90 bp | TCCTCTCCTTTCTCAGGCTTCCTTACATGGTTATTGCCTGTCGCATGCTGCCCCCACCAGGCCATACCGTaGCTTGTAACCACGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: SSPFSGFLTWLLPVACCPHQAIP*LVTTKT Trigger: AGTCTTCGTGGTTACAAGCAACGGTATGGCCTGGTG...GGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCTGGCTGGATGCTTGGAGAGGTGTGGCTTTCACTGGCCTGGCCTTTGGCTGGCTTAAAGATTTaGAGGAACGGAGAATCCGGA | + |
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Preference number: 5 (lower is better) Translates to: RRAGWMLGEVWLSLAWPLAGLKI*RNGESG Trigger: TCCGGATTCTCCGTTCCTCAAAATCTTTAAGCCAGC...CAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS GCA 90 bp | GCCTGTAATTCCTTCTCTGACAGGGTTTGGAGCTTCACTATTCGTTaGTGGAGGTGGATGATGGTGGAAGTCACAAAGACAAAGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: ACNSFSDRVWSFTIR*WRWMMVEVTKTKMR Trigger: CCTCATCTTTGTCTTTGTGACTTCCACCATCATCCACCTCCAGCAACGAATAGTGAAGCTCCAAACCCTGTCAGAGAAGGAATTACAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS-3UTR CAA 90 bp | ACATGTAATACGTTTTCTGCACATATTAGTTCTCGTTGGCAGTCCAAGGCACACGAGCCCTCAATACCATaGCCCGCAAACACCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: TCNTFSAHISSRWQSKAHEPSIP*PANTTS Trigger: AGACGTGGTGTTTGCGGGCAATGGTATTGAGGGCTC...GTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS CCA 90 bp | TGTAATTCCTTCTCTGACAGGGTTTGGAGCTTCACTATTCGTTGCTaGAGGTGGATGATGGTGGAAGTCACAAAGACAAAGATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CNSFSDRVWSFTIRC*RWMMVEVTKTKMRK Trigger: CTTCCTCATCTTTGTCTTTGTGACTTCCACCATCATCCACCTCCAGCAACGAATAGTGAAGCTCCAAACCCTGTCAGAGAAGGAATTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CCA 72 bp | CCTCGGCGCACATGGACACCCACAAAGGTACTCGGCTaGCTCCCATTCACCCGCAGGCCACGCAGGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PRRTWTPTKVLG*LPFTRRPRRKA Trigger: GGCTTTCCTGCGTGGCCTGCGGGTGAATGGGAGCCAGCCGAGTACCTTTGTGGGTGTCCATGTGCGCCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS GCA 72 bp | CCCAGGCGGCCGATGGAATTGATCGTGAATATGCCCTaGAGCTTGGCACTCTGCTGCATGTCTGTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PRRPMELIVNMP*SLALCCMSVLA Trigger: GGCAAGAACAGACATGCAGCAGAGTGCCAAGCTGCAGGGCATATTCACGATCAATTCCATCGGCCGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CCA 72 bp | ACGGAGAATCCGGAAGGGTGTAGTTGGCTAGGTAGATaGTATCACCACCTGCCAGGTAGGCAGCCCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: TENPEGCSWLGR*YHHLPGRQPKS Trigger: GGATTTGGGCTGCCTACCTGGCAGGTGGTGATACCATCTACCTAGCCAACTACACCCTTCCGGATTCTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069800.6 |
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| CDS CAA 72 bp | TGCCCTGCAGCTTGGCACTCTGCTGCATGTCTGTTCTaGCCGCGTTTGGTGAGGACATTTGAACCGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: CPAAWHSAACLF*PRLVRTFEPPV Trigger: TACAGGCGGTTCAAATGTCCTCACCAAACGCGGCAAGAACAGACATGCAGCAGAGTGCCAAGCTGCAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CAA 90 bp | TGCCCTGCAGCTTGGCACTCTGCTGCATGTCTGTTCTTGCCGCGTTaGGTGAGGACATTTGAACCGCCTGTAATTCCTTCTCTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: CPAAWHSAACLFLPR*VRTFEPPVIPSLTG Trigger: CCCTGTCAGAGAAGGAATTACAGGCGGTTCAAATGTCCTCACCAAACGCGGCAAGAACAGACATGCAGCAGAGTGCCAAGCTGCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CAA 72 bp | CGGCCGATGGAATTGATCGTGAATATGCCCTGCAGCTaGGCACTCTGCTGCATGTCTGTTCTTGCCGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: RPMELIVNMPCS*ALCCMSVLAAF Trigger: AAACGCGGCAAGAACAGACATGCAGCAGAGTGCCAAGCTGCAGGGCATATTCACGATCAATTCCATCGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS TCA 72 bp | TGCATGTCTGTTCTTGCCGCGTTTGGTGAGGACATTTaGACCGCCTGTAATTCCTTCTCTGACAGGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CMSVLAAFGEDI*TACNSFSDRVW Trigger: CCAAACCCTGTCAGAGAAGGAATTACAGGCGGTTCAAATGTCCTCACCAAACGCGGCAAGAACAGACATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CCA 72 bp | GACAGGGTTTGGAGCTTCACTATTCGTTGCTGGAGGTaGATGATGGTGGAAGTCACAAAGACAAAGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: DRVWSFTIRCWR*MMVEVTKTKMR Trigger: CCTCATCTTTGTCTTTGTGACTTCCACCATCATCCACCTCCAGCAACGAATAGTGAAGCTCCAAACCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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| CDS CCA 72 bp | TTCTCTGACAGGGTTTGGAGCTTCACTATTCGTTGCTaGAGGTGGATGATGGTGGAAGTCACAAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: FSDRVWSFTIRC*RWMMVEVTKTK Trigger: CTTTGTCTTTGTGACTTCCACCATCATCCACCTCCAGCAACGAATAGTGAAGCTCCAAACCCTGTCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069800.6 ENSMUST00000210620.2 |
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