Pregenerated sensors for FUT11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039357Ensembl transcript IDs: ENSMUST00000048016.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAGTGTTCCAGTGAGGTGGTGGAATGGCCAGGACCCTGCACCTaGATAAGCGTCACTTACCCTTCCTGGTGCACAGCACACCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: GECSSEVVEWPGPCT*ISVTYPSWCTAHLS Trigger: ACTCAGGTGTGCTGTGCACCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCACCTCACTGGAACACTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CCA 90 bp | CAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGGTaGTCTGGAAGAGTAGCCAGTGCTCTTAAGAGTGGAGCCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: QTVVSSMWMLGIKLG*SGRVASALKSGAIS Trigger: AGAGATGGCTCCACTCTTAAGAGCACTGGCTACTCTTCCAGACCACCCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CCA 90 bp | GTAATACCCTTGCATCTGAAGTTACAGACAGTTGTCAGCTCTATGTaGATGCTAGGAATCAAACTTGGGTGGTCTGGAAGAGTAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VIPLHLKLQTVVSSM*MLGIKLGWSGRVAS Trigger: ACTGGCTACTCTTCCAGACCACCCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGATGCAAGGGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 90 bp | GAAATGACTACAGACATGAGAAGTGTACTTGAGTCATCAAATGGGTaGTTCTGGCTTCTGCTTCTCTTTAAGGAGAAGCTATCTTACCAC | + |
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Preference number: 1 (lower is better) Translates to: EMTTDMRSVLESSNG*FWLLLLFKEKLSYH Trigger: GTGGTAAGATAGCTTCTCCTTAAAGAGAAGCAGAAGCCAGAAGCACCCATTTGATGACTCAAGTACACTTCTCATGTCTGTAGTCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTaGTTAAAGCATCTAACATGCATGTATGTATCTATCTGTATAGAC | + |
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Preference number: 1 (lower is better) Translates to: LVTSLDITVLTMKPG*LKHLTCMYVSICID Trigger: GTCTATACAGATAGATACATACATGCATGTTAGATGCTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGAATGGCCAGGACCCTGCACCTGCATAAGCGTCACTTACCCTTCCTGGCTAAGGCATTCTTTCTaGTCGCCCCAGAAAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VVEWPGPCTCISVTYPSWLRHSF*SPQKKL Trigger: GAGCTTTTTCTGGGGCGATCAGAAAGAATGCCTTAG...CCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGAATGGCCAGGACCCTGCACCTGCATAAGCGTCACTTACCCTTCCTGGGGTGCTTCTGGCTTCTaGTTCTCTTTAAGGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VVEWPGPCTCISVTYPSWGASGF*FSLRRS Trigger: GCTTCTCCTTAAAGAGAAGCAGAAGCCAGAAGCACC...CCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTAGGCTTTGGATGTTGGTTTGGGCCATGTAGTGAGACCTATCTCAAAAGGCCACACATAAGGCTTTaGCTCCCAACCAGTGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: GLGFGCWFGPCSETYLKRPHIRL*LPTSVP Trigger: CGGCACACTGGTTGGGAGGCAAAGCCTTATGTGTGG...CCTTTTGAGATAGGTCTCACTACATGGCCCAAACCAACATCCAAAGCCTAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACTTGAGGCCTAGGCTTTaGATGTTGGTTTGGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: DKGVWQALSKKQASLSSNLRPRL*MLVWAM Trigger: CATGGCCCAAACCAACATCCAAAGCCTAGGCCTCAA...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR GCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACATAGTATTGTATACTTaGAGCCCCTGCTACTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: DKGVWQALSKKQASLSSNIVLYT*SPCYLA Trigger: TGCTAAGTAGCAGGGGCTGCAAGTATACAATACTAT...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGGGCAGGTACTGTCATTaGGGCCTAGGCTTTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: LVTSLDITVLTMKPGCLKGRYCH*GLGFGC Trigger: ACATCCAAAGCCTAGGCCTCAATGACAGTACCTGCC...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGTTACAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGGAGTCATCAAATGGGTaGTTCTGGCTTCTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SEVTDSCQLYVDARNQTWESSNG*FWLLLL Trigger: GAGAAGCAGAAGCCAGAAGCACCCATTTGATGACTC...CCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGTTACAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGCTAGGCTTTGGATGTTaGTTTGGGCCATGTAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SEVTDSCQLYVDARNQTWLGFGC*FGPCSE Trigger: CTCACTACATGGCCCAAACCAACATCCAAAGCCTAG...CCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTGGAATCAGAGCTCTCTaGCTTGTTTTATACTATGAT | + |
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Preference number: 2 (lower is better) Translates to: SSFPCGNGAPDLPWPFMIGIRAL*LVLYYD Trigger: ATCATAGTATAAAACAAGTCAGAGAGCTCTGATTCC...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTAACAAAATAAAGATCTaGGGACATAACTCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSFPCGNGAPDLPWPFMINKIKI*GHNSEA Trigger: TGCCTCTGAGTTATGTCCCCAGATCTTTATTTTGTT...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGACTCAATTTATAGAATaGTTGCCTTCCCAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: LVTSLDITVLTMKPGCLKTQFIE*LPSQNH Trigger: GTGGTTCTGGGAAGGCAAGCATTCTATAAATTGAGT...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACAAACAAACAAAAATAGGTTAAGCAATTTCCATGCTACTACTGAAGGCAGTCTTTCCAGTTTGTaGGAAATCGCCCAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PKQTNKNRLSNFHATTEGSLSSL*EIAQSQ Trigger: CTGGCTTTGGGCGATTTCCCACAAACTGGAAAGACT...GCCTTCAGTAGTAGCATGGAAATTGCTTAACCTATTTTTGTTTGTTTGTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGGTTGTCAGCTCTATGTaGATGCTAGGAATCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: LVTSLDITVLTMKPGCLKVVSSM*MLGIKL Trigger: AAGTTTGATTCCTAGCATCCACATAGAGCTGACAAC...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTTCAAATGGGTGCTTCTaGCTTCTGCTTCTCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RFRDICSLQSDALINQETSNGCF*LLLLFK Trigger: CTTAAAGAGAAGCAGAAGCCAGAAGCACCCATTTGA...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 90 bp | GTGGTTATTCATAGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTaGCCCTGGCCTTTTATGATTATTTATATAATGAGAGGGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: VVIHSSFPCGNGAPD*PWPFMIIYIMRGIK Trigger: CTTTATCCCTCTCATTATATAAATAATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACTATGAATAACCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR TCA 90 bp | CCAAAACAAACAAACAAAAATAGGTTAAGCAATTTCCATGCTACTACTGAAGGCTTATCTGGAAGAACATaGGAGAATGTGGGTAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PKQTNKNRLSNFHATTEGLSGRT*ENVGSG Trigger: TCCACTACCCACATTCTCTCATGTTCTTCCAGATAA...GCCTTCAGTAGTAGCATGGAAATTGCTTAACCTATTTTTGTTTGTTTGTTTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACAAACAAACAAAAATAGGTTAAGCAATTTCCATGCTACTACTGAAGGCACCATAAACGTTATCTaGAAGAACATGAGAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: PKQTNKNRLSNFHATTEGTINVI*KNMREC Trigger: ACATTCTCTCATGTTCTTCCAGATAACGTTTATGGT...GCCTTCAGTAGTAGCATGGAAATTGCTTAACCTATTTTTGTTTGTTTGTTTTGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 72 bp | TCCAGTGAGGTGGTGGAATGGCCAGGACCCTGCACCTaGATAAGCGTCACTTACCCTTCCTGGTGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSEVVEWPGPCT*ISVTYPSWCTA Trigger: TGCTGTGCACCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCACCTCACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 72 bp | CCCTGCACCTGCATAAGCGTCACTTACCCTTCCTGGTaGACAGCACACCTGAGTTCTGATTTAGGCTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: PCTCISVTYPSW*TAHLSSDLGLY Trigger: GTACAAGCCTAAATCAGAACTCAGGTGTGCTGTGCACCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CCA 72 bp | GTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGGTaGTCTGGAAGAGTAGCCAGTGCTCTTAAGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: VSSMWMLGIKLG*SGRVASALKSG Trigger: TCCACTCTTAAGAGCACTGGCTACTCTTCCAGACCACCCAAGTTTGATTCCTAGCATCCACATAGAGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 72 bp | GTGTACTTGAGTCATCAAATGGGTGCTTCTGGCTTCTaGTTCTCTTTAAGGAGAAGCTATCTTACCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: VYLSHQMGASGF*FSLRRSYLTTG Trigger: GCCTGTGGTAAGATAGCTTCTCCTTAAAGAGAAGCAGAAGCCAGAAGCACCCATTTGATGACTCAAGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CCA 72 bp | ATTTATATATTGAGATGGGGTCTCAACATAGAGCTCTaGTTAGCCTGGAACACTCCAGCTACCTGTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: IYILRWGLNIEL*LAWNTPATCLC Trigger: GCAGAGACAGGTAGCTGGAGTGTTCCAGGCTAACCAGAGCTCTATGTTGAGACCCCATCTCAATATATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGGTCAGTCTTTCCAGTTaGTGGGAAATCGCCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LVTSLDITVLTMKPGCLKVSLSS*WEIAQS Trigger: GCTTTGGGCGATTTCCCACAAACTGGAAAGACTGAC...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR TCA 72 bp | TATAGAATGCTTGCCTTCCCAGAACCACAAAACCAGTaGCTCCGCACCATAAACGTTATCTGGAAGAACATG | + |
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Preference number: 3 (lower is better) Translates to: YRMLAFPEPQNQ*LRTINVIWKNM Trigger: CATGTTCTTCCAGATAACGTTTATGGTGCGGAGTCACTGGTTTTGTGGTTCTGGGAAGGCAAGCATTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CCA 72 bp | TTGCATCTGAAGTTACAGACAGTTGTCAGCTCTATGTaGATGCTAGGAATCAAACTTGGGTGGTCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LHLKLQTVVSSM*MLGIKLGWSGR Trigger: TCTTCCAGACCACCCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR GCA 72 bp | ACAGACATGAGAAGTGTACTTGAGTCATCAAATGGGTaGTTCTGGCTTCTGCTTCTCTTTAAGGAGAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: TDMRSVLESSNG*FWLLLLFKEKL Trigger: TAGCTTCTCCTTAAAGAGAAGCAGAAGCCAGAAGCACCCATTTGATGACTCAAGTACACTTCTCATGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR TCA 72 bp | GATGGTGCTGTATGCCTTGTAGCTGAGCCGCAAACCTaGAAAACTTCTTGTTGCTGTTTTTATATGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: DGAVCLVAEPQT*KTSCCCFYMTV Trigger: TACTGTCATATAAAAACAGCAACAAGAAGTTTTTCAGGTTTGCGGCTCAGCTACAAGGCATACAGCACCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGGGTGACTTAAATCCCTaGCTTTCTTCAATCTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LVTSLDITVLTMKPGCLKGDLNP*LSSICL Trigger: CAAACAGATTGAAGAAAGCAAGGGATTTAAGTCACC...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | GTGGTGGAATGGCCAGGACCCTGCACCTGCATAAGCGTCACTTACCCTTCCTGGGGTTCTGCAGGCACTTaGCATAGGAATCCACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VVEWPGPCTCISVTYPSWGSAGT*HRNPPG Trigger: TCCCGGTGGATTCCTATGGCAAGTGCCTGCAGAACC...CCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | TTCACTAAAGGTGGATGTGCCTCAGGTACCACAGTAACGCAGTCTTCCAAGTTAAGGAGCGCCCAGCTCTaGTGCGCCAGGCGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FTKGGCASGTTVTQSSKLRSAQL*CARRGR Trigger: CCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCT...TAACTTGGAAGACTGCGTTACTGTGGTACCTGAGGCACATCCACCTTTAGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | CTTAAGGGTGACTTAAATCCCTTGCTTTCTTCAATCTGTTTGAACTGGGGGCCTCGCCTCTCTGTTCCCTaGAGGCGGGGACCCGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LKGDLNPLLSSICLNWGPRLSVP*RRGPGP Trigger: GGGCCCGGGTCCCCGCCTCCAGGGAACAGAGAGGCG...AGGCCCCCAGTTCAAACAGATTGAAGAAAGCAAGGGATTTAAGTCACCCTTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACGTTCTGGATCCTCGGTaGTGGCCGTGGCTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DKGVWQALSKKQASLSSNVLDPR*WPWLCP Trigger: AGGACACAGCCACGGCCACCACCGAGGATCCAGAAC...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACGCCAGGGGTAGGCACTaGACAGTTCATGTGCGACGA | + |
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Preference number: 4 (lower is better) Translates to: DKGVWQALSKKQASLSSNARGRH*TVHVRR Trigger: TCGTCGCACATGAACTGTCCAGTGCCTACCCCTGGC...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR TCA 90 bp | GTGGTGGAATGGCCAGGACCCTGCACCTGCATAAGCGTCACTTACCCTTCCTGGAACTCTGCCAACTTTTaGGGGGACTCAAAGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: VVEWPGPCTCISVTYPSWNSANF*GDSKSS Trigger: TGATGACTTTGAGTCCCCTCAAAAGTTGGCAGAGTT...CCAGGAAGGGTAAGTGACGCTTATGCAGGTGCAGGGTCCTGGCCATTCCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR TCA 90 bp | TTCACTAAAGGTGGATGTGCCTCAGGTACCACAGTAACGCAGTCTTCCAAGTTAGTCCCTCACAGAGGGTaGTCCACGATACACGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FTKGGCASGTTVTQSSKLVPHRG*STIHGH Trigger: GTGCCCGTGTATCGTGGATCACCCTCTGTGAGGGAC...TAACTTGGAAGACTGCGTTACTGTGGTACCTGAGGCACATCCACCTTTAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTCCGCGCGGAAGTCCGTaGCGTAAAAGAGCAACGCGC | + |
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Preference number: 4 (lower is better) Translates to: SSFPCGNGAPDLPWPFMIPRGSP*RKRATR Trigger: GCGCGTTGCTCTTTTACGGCACGGACTTCCGCGCGG...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | GCCAGTGCTCTTAAGAGTGGAGCCATCTCTCCAGCCTCAAATCTAAAGTTTTTACTGGATCCTCGGTGGTaGCCGTGGCTGTGTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ASALKSGAISPASNLKFLLDPRW*PWLCPV Trigger: TACAGGACACAGCCACGGCCACCACCGAGGATCCAG...TAAAAACTTTAGATTTGAGGCTGGAGAGATGGCTCCACTCTTAAGAGCACTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 72 bp | CTCCAGCAACAACCATTCGTGACCAGCACGCTCACTTaGCATAAAGGTCCTAGAGAGGTGAGTGTTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQQQPFVTSTLT*HKGPREVSVPV Trigger: CACTGGAACACTCACCTCTCTAGGACCTTTATGCAAAGTGAGCGTGCTGGTCACGAATGGTTGTTGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTGCCACGCACGCGCCGTaGGCACACTGTATGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETATHAP*AHCMRS Trigger: GGAGCGCATACAGTGTGCGCACGGCGCGTGCGTGGC...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | GCCAGTGCTCTTAAGAGTGGAGCCATCTCTCCAGCCTCAAATCTAAAGTTTTTACGGATGCCCGGGCCGTaGCTCAGTAGGAAGTTATTG | + |
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Preference number: 4 (lower is better) Translates to: ASALKSGAISPASNLKFLRMPGP*LSRKLL Trigger: CAATAACTTCCTACTGAGCCACGGCCCGGGCATCCG...TAAAAACTTTAGATTTGAGGCTGGAGAGATGGCTCCACTCTTAAGAGCACTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR CCA 90 bp | TTCACTAAAGGTGGATGTGCCTCAGGTACCACAGTAACGCAGTCTTCCAAGTTAAAAGGCCATGAGTTCTaGATCCTCGGTGGTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: FTKGGCASGTTVTQSSKLKGHEF*ILGGGR Trigger: ACGGCCACCACCGAGGATCCAGAACTCATGGCCTTT...TAACTTGGAAGACTGCGTTACTGTGGTACCTGAGGCACATCCACCTTTAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | CCAAAACAAACAAACAAAAATAGGTTAAGCAATTTCCATGCTACTACTGAAGGCAGCGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKQTNKNRLSNFHATTEGSGDSS*RSAQLW Trigger: CCAGAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCT...GCCTTCAGTAGTAGCATGGAAATTGCTTAACCTATTTTTGTTTGTTTGTTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTACAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGGTGCGGAAACAGACCTaGGCTCCACCACAGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SEVTDSCQLYVDARNQTWVRKQT*APPQQH Trigger: GTGTTGCTGTGGTGGAGCCCAGGTCTGTTTCCGCAC...CCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGTGCTCTTAAGAGTGGAGCCATCTCTCCAGCCTCAAATCTAAAGTTTTTATGTGGATCATGGCAGTaGGAGCTTCCCCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASALKSGAISPASNLKFLCGSWQ*ELPPDR Trigger: TCTATCAGGGGGAAGCTCTCACTGCCATGATCCACA...TAAAAACTTTAGATTTGAGGCTGGAGAGATGGCTCCACTCTTAAGAGCACTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGTTACAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGTCAGTAGGAAGTTATTaGGCGGCGACTCCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVTDSCQLYVDARNQTWSVGSY*AATPRA Trigger: TGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGA...CCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR GCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACAAAGTCAATAAACTCTaGCAACTTTTGAGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: DKGVWQALSKKQASLSSNKVNKL*QLLRGL Trigger: GAGTCCCCTCAAAAGTTGGCAGAGTTTATTGACTTT...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTGTGATGCCTCCAGGCTaGTTGTATGCCAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPCGNGAPDLPWPFMIVMPPG*LYARYF Trigger: GAAATACCTGGCATACAAGCAGCCTGGAGGCATCAC...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR GCA 90 bp | GGCCTAGGCTTTGGATGTTGGTTTGGGCCATGTAGTGAGACCTATCTCAAAAGGTCCCAAAATTTCCTCTaGTGTGTCTCATTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGFGCWFGPCSETYLKRSQNFL*CVSLLW Trigger: CCACAACAATGAGACACAGCAGAGGAAATTTTGGGA...CCTTTTGAGATAGGTCTCACTACATGGCCCAAACCAACATCCAAAGCCTAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTCCTCGGTGGTGGCCGTaGCTGTGTCCTGTAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETPRWWP*LCPVIA Trigger: TGCGATTACAGGACACAGCCACGGCCACCACCGAGG...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACTGTAATCATTGCAGATaGCATTCTCCAGAGCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKGVWQALSKKQASLSSNCNHCR*HSPELS Trigger: ACTTAGCTCTGGAGAATGCCATCTGCAATGATTACA...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGGGTGACTTAAATCCCTTGCTTTCTTCAATCTGTTTGAACTGGGGGCCTAGCCGAGCCAGTTCATaGTCACAGACGAAACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGDLNPLLSSICLNWGPSRASS*SQTKHS Trigger: TGAGTGTTTCGTCTGTGACCATGAACTGGCTCGGCT...AGGCCCCCAGTTCAAACAGATTGAAGAAAGCAAGGGATTTAAGTCACCCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR TCA 90 bp | TTCACTAAAGGTGGATGTGCCTCAGGTACCACAGTAACGCAGTCTTCCAAGTTAATTAGGATGACAGAGTaGTTATTGGGCATCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTKGGCASGTTVTQSSKLIRMTE*LLGIQS Trigger: GGACTGGATGCCCAATAATCACTCTGTCATCCTAAT...TAACTTGGAAGACTGCGTTACTGTGGTACCTGAGGCACATCCACCTTTAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTTTATCCAGAAGAAACTaGTTGGTGATGCCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPCGNGAPDLPWPFMILSRRN*LVMPPG Trigger: GCCTGGAGGCATCACCAACCAGTTTCTTCTGGATAA...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR TCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTGGGACAAAAAGGCCATaGGTTCTGGATCCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETGTKRP*VLDPRW Trigger: CCACCGAGGATCCAGAACTCATGGCCTTTTTGTCCC...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | GCAATCAGATGCACTGATAAACCAAGAGACTTCTCAAGTGATAATTCATCAATAGGCACAGCACCCAGATaGATGGGGCGCCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIRCTDKPRDFSSDNSSIGTAPR*MGRHSF Trigger: AAAACTGTGGCGCCCCATGCATCTGGGTGCTGTGCC...TATTGATGAATTATCACTTGAGAAGTCTCTTGGTTTATCAGTGCATCTGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGCTCTTAAGAGTGGAGCCATCTCTCCAGCCTCAAATCTAAAGTTTTTATGTGTCTCATTGTTGTaGATCATGGCAGTGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASALKSGAISPASNLKFLCVSLL*IMAVRA Trigger: AGCTCTCACTGCCATGATCCACAACAATGAGACACA...TAAAAACTTTAGATTTGAGGCTGGAGAGATGGCTCCACTCTTAAGAGCACTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTACTCCCCACTCCCTGTaGTCCAGGTTATCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETTPHSL*SRLSRR Trigger: TCTTCTGGATAACCTGGAGCACAGGGAGTGGGGAGT...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAACAAACAAACAAAAATAGGTTAAGCAATTTCCATGCTACTACTGAAGGCCAGCACCCAGATGCATaGGGCGCCACAGTTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKQTNKNRLSNFHATTEGQHPDA*GATVFL Trigger: CAGAAAAACTGTGGCGCCCCATGCATCTGGGTGCTG...GCCTTCAGTAGTAGCATGGAAATTGCTTAACCTATTTTTGTTTGTTTGTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTATGAGAGGATGCATGTaGTTTCTCGGCATTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETMRGCM*FLGIQP Trigger: CGGCTGAATGCCGAGAAAGCACATGCATCCTCTCAT...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR GCA 90 bp | CTGGTCACATCCTTAGATATCACAGTATTAACCATGAAGCCTGGTTGCTTAAAGCTGTCATGTAATCATTaGAGATGGCATTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTSLDITVLTMKPGCLKLSCNH*RWHSPE Trigger: CTCTGGAGAATGCCATCTGCAATGATTACATGACAG...CTTTAAGCAACCAGGCTTCATGGTTAATACTGTGATATCTAAGGATGTGACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 72 bp | ATTAGAGTTGAAGCTATAACTCAATTTATAGAATGCTaGCCTTCCCAGAACCACAAAACCAGTGACTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRVEAITQFIEC*PSQNHKTSDSA Trigger: TGCGGAGTCACTGGTTTTGTGGTTCTGGGAAGGCAAGCATTCTATAAATTGAGTTATAGCTTCAACTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTTCCAGGCTGCTTGTATaGCAGGTATTTCATATACTC | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETSRLLV*QVFHIL Trigger: GAGTATATGAAATACCTGGCATACAAGCAGCCTGGA...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| 3UTR CAA 72 bp | TGCTGTAGAAATCAGCACTGCACTGAAATTGATGACTaGATTGGGAATCAGAGCTCTCTGACTTGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: CCRNQHCTEIDD*IGNQSSLTCFI Trigger: TATAAAACAAGTCAGAGAGCTCTGATTCCCAATCAAGTCATCAATTTCAGTGCAGTGCTGATTTCTACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 72 bp | TGCACAGCACACCTGAGTTCTGATTTAGGCTTGTACTaGTATAATACTTACTTTGCTGTAGAAATCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CTAHLSSDLGLY*YNTYFAVEIST Trigger: AGTGCTGATTTCTACAGCAAAGTAAGTATTATACAAGTACAAGCCTAAATCAGAACTCAGGTGTGCTGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS-3UTR TCA 90 bp | AGATTCAGAGATATCTGTAGTTTGCAATCAGATGCACTGATAAACCAAGAGACTAGTCATCAATTAGGATaGCAGAGTGATTATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RFRDICSLQSDALINQETSHQLG*QSDYWA Trigger: TGCCCAATAATCACTCTGTCATCCTAATTGATGACT...AGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 72 bp | AGTAGGCAGTTCATCTATATCTTCAAACCTACACTTTaGGTTGTGTGGATTTATATGGGAGTTTTGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRQFIYIFKPTL*VVWIYMGVLIE Trigger: TTCAATCAAAACTCCCATATAAATCCACACAACCAAAAGTGTAGGTTTGAAGATATAGATGAACTGCCTACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| 3UTR CAA 72 bp | TATCTGTATAGACATAGATTCAGAGATATCTGTAGTTaGCAATCAGATGCACTGATAAACCAAGAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLYRHRFRDICS*QSDALINQETS Trigger: AGAAGTCTCTTGGTTTATCAGTGCATCTGATTGCAAACTACAGATATCTCTGAATCTATGTCTATACAGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS TCA 90 bp | CCTCCCCGGAAGCCTCGGACCCGGAGCTGCTGGCCGAACAGACACTaGGCACCCCCAGGGCGGCCAGCACCGCCTCGGTACAGCGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRKPRTRSCWPNRH*APPGRPAPPRYSEQ Trigger: CTGCTCGCTGTACCGAGGCGGTGCTGGCCGCCCTGGGGGTGCTCAGTGTCTGTTCGGCCAGCAGCTCCGGGTCCGAGGCTTCCGGGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | GGGTCGGCGCGCGCCCGTCGATCCCGGGACGCCACGCACGCGCCGTaGGCACACTGTATGCGCTCCGAGTCACCTGGGAAGTGCGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSARARRSRDATHAP*AHCMRSESPGKCGN Trigger: GTTTCCGCACTTCCCAGGTGACTCGGAGCGCATACAGTGTGCGCACGGCGCGTGCGTGGCGTCCCGGGATCGACGGGCGCGCGCCGACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | CCCGGGCCGTGGCTCAGTAGGAAGTTATTGAGCGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGGTGCGCCAGGCGCGGCAGGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPWLSRKLLSGDSS*RSAQLWCARRGRGA Trigger: TGCGCCCCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | CCCGTCGATCCCGGGACGCCACGCACGCGCCGTGCGCACACTGTATaGGCTCCGAGTCACCTGGGAAGTGCGGAAACAGACCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVDPGTPRTRRAHTV*APSHLGSAETDLGS Trigger: GGAGCCCAGGTCTGTTTCCGCACTTCCCAGGTGACTCGGAGCGCATACAGTGTGCGCACGGCGCGTGCGTGGCGTCCCGGGATCGACGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 90 bp | CTGGATCCTCGGTGGTGGCCGTGGCTGTGTCCTGTAATCGCACGGTaGGCGGCTCGCGGTTCTGCAGGCACTTGCCATAGGAATCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LDPRWWPWLCPVIAR*AARGSAGTCHRNPP Trigger: CGGTGGATTCCTATGGCAAGTGCCTGCAGAACCGCGAGCCGCCCACCGTGCGATTACAGGACACAGCCACGGCCACCACCGAGGATCCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | CACGCGCCGTGCGCACACTGTATGCGCTCCGAGTCACCTGGGAAGTaGGGAAACAGACCTGGGCTCCACCACAGCAACACTGGTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HAPCAHCMRSESPGK*GNRPGLHHSNTGRS Trigger: GGACCTACCAGTGTTGCTGTGGTGGAGCCCAGGTCTGTTTCCGCACTTCCCAGGTGACTCGGAGCGCATACAGTGTGCGCACGGCGCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 90 bp | CGGCTGAAAGTGGCGGTGAGATTGAAGAGACGGATGCCCGGGCCGTaGCTCAGTAGGAAGTTATTGAGCGGCGACTCCTCGTGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLKVAVRLKRRMPGP*LSRKLLSGDSSCRS Trigger: GCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGGCATCCGTCTCTTCAATCTCACCGCCACTTTCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS TCA 90 bp | TGCGACGACTGGGCAATGCGAGGCTCGGGGACAGGAATGTCCCCATaGGAGGATGCATGTGCTTTCTCGGCATTCAGCCGAGCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CDDWAMRGSGTGMSP*EDACAFSAFSRASS Trigger: TGAACTGGCTCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAGCCTCGCATTGCCCAGTCGTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | CTGGGCAATGCGAGGCTCGGGGACAGGAATGTCCCCATGAGAGGATaGATGTGCTTTCTCGGCATTCAGCCGAGCCAGTTCATGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGNARLGDRNVPMRG*MCFLGIQPSQFMVT Trigger: TGTGACCATGAACTGGCTCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAGCCTCGCATTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 90 bp | ATTCTCGGGAATCTCTTCGACTTTCCCAAAGCCAGGGGTAGGCACTaGACAGTTCATGTGCGACGACTGGGCAATGCGAGGCTCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILGNLFDFPKARGRH*TVHVRRLGNARLGD Trigger: GTCCCCGAGCCTCGCATTGCCCAGTCGTCGCACATGAACTGTCCAGTGCCTACCCCTGGCTTTGGGAAAGTCGAAGAGATTCCCGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | AATGCGAGGCTCGGGGACAGGAATGTCCCCATGAGAGGATGCATGTaGTTTCTCGGCATTCAGCCGAGCCAGTTCATGGTCACAGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: NARLGDRNVPMRGCM*FLGIQPSQFMVTDE Trigger: TTCGTCTGTGACCATGAACTGGCTCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAGCCTCGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | GATAAAGGAGTCTGGCAAGCACTGAGCAAAAAGCAGGCCTCACTCTCCAGCAACGGCAACATGGGATCGTaGACTCCCCACTCCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DKGVWQALSKKQASLSSNGNMGS*TPHSLC Trigger: GCACAGGGAGTGGGGAGTCAACGATCCCATGTTGCC...GTTGCTGGAGAGTGAGGCCTGCTTTTTGCTCAGTGCTTGCCAGACTCCTTTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS CCA 90 bp | TCACAGAGGGTGATCCACGATACACGGGCACAGCACCCAGATGCATaGGGCGCCACAGTTTTTCTGTCATGTAATCATTGCAGATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQRVIHDTRAQHPDA*GATVFLSCNHCRWH Trigger: ATGCCATCTGCAATGATTACATGACAGAAAAACTGTGGCGCCCCATGCATCTGGGTGCTGTGCCCGTGTATCGTGGATCACCCTCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS GCA 90 bp | CACCCAGATGCATGGGGCGCCACAGTTTTTCTGTCATGTAATCATTaGAGATGGCATTCTCCAGAGCTAAGTGGAACTTATACCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HPDAWGATVFLSCNH*RWHSPELSGTYTGT Trigger: TGTCCCGGTATAAGTTCCACTTAGCTCTGGAGAATGCCATCTGCAATGATTACATGACAGAAAAACTGTGGCGCCCCATGCATCTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTCTCAGTAGGAAGTTATaGAGCGGCGACTCCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSFPCGNGAPDLPWPFMILSRKL*SGDSSC Trigger: GCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAG...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS TCA 90 bp | CCCAAAATTTCCTCTGCTGTGTCTCATTGTTGTGGATCATGGCAGTaGGAGCTTCCCCCTGATAGAGACCTTGCCAATAATCTTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKISSAVSHCCGSWQ*ELPPDRDLANNLVA Trigger: GGCTACAAGATTATTGGCAAGGTCTCTATCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAGACACAGCAGAGGAAATTTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | AGTTCTTTCCCTTGTGGAAATGGAGCACCTGATTTGCCCTGGCCTTTTATGATTCTCTGCTGTGTCTCATaGTTGTGGATCATGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFPCGNGAPDLPWPFMILCCVS*LWIMAV Trigger: CACTGCCATGATCCACAACAATGAGACACAGCAGAG...AATCATAAAAGGCCAGGGCAAATCAGGTGCTCCATTTCCACAAGGGAAAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS GCA 90 bp | TGCTCCAGGTTATCCAGAAGAAACTGGTTGGTGATGCCTCCAGGCTaGTTGTATGCCAGGTATTTCATATACTCGTCATCATTTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRLSRRNWLVMPPG*LYARYFIYSSSFLS Trigger: GGACAAAAATGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTTCTGGATAACCTGGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGGTGACTTAAATCCCTTGCTTTCTTCAATCTGTTTGAACTGGGGGCCTATGCCTCCAGGCTGCTaGTATGCCAGGTATTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LKGDLNPLLSSICLNWGPMPPGC*YARYFI Trigger: TATGAAATACCTGGCATACAAGCAGCCTGGAGGCAT...AGGCCCCCAGTTCAAACAGATTGAAGAAAGCAAGGGATTTAAGTCACCCTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | GCAATCAGATGCACTGATAAACCAAGAGACTTCTCAAGTGATAATTCATCAATAAAAGTGGCGGTGAGATaGAAGAGACGGATGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AIRCTDKPRDFSSDNSSIKVAVR*KRRMPG Trigger: CCCGGGCATCCGTCTCTTCAATCTCACCGCCACTTT...TATTGATGAATTATCACTTGAGAAGTCTCTTGGTTTATCAGTGCATCTGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTTACAGACAGTTGTCAGCTCTATGTGGATGCTAGGAATCAAACTTGGTGCTGTGTCTCATTGTaGTGGATCATGGCAGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: SEVTDSCQLYVDARNQTWCCVSL*WIMAVR Trigger: TCTCACTGCCATGATCCACAACAATGAGACACAGCA...CCAAGTTTGATTCCTAGCATCCACATAGAGCTGACAACTGTCTGTAACTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 90 bp | GTTATCCAGAAGAAACTGGTTGGTGATGCCTCCAGGCTGCTTGTATaGCAGGTATTTCATATACTCGTCATCATTTTTGTCCAGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: VIQKKLVGDASRLLV*QVFHILVIIFVQKV Trigger: GACTTTCTGGACAAAAATGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTTCTGGATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | GGCGCGGCAGGGGCGCATCAGCCGCGCGGAAGTCCGTaGCGTAAAAGAGCAACGCGCGCGTCCGCGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GAAGAHQPRGSP*RKRATRASAGR Trigger: CCGACCCGCGGACGCGCGCGTTGCTCTTTTACGGCACGGACTTCCGCGCGGCTGATGCGCCCCTGCCGCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | CGCGCCCGTCGATCCCGGGACGCCACGCACGCGCCGTaGGCACACTGTATGCGCTCCGAGTCACCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RARRSRDATHAP*AHCMRSESPGK Trigger: CTTCCCAGGTGACTCGGAGCGCATACAGTGTGCGCACGGCGCGTGCGTGGCGTCCCGGGATCGACGGGCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | CCCGGGACGCCACGCACGCGCCGTGCGCACACTGTATaGGCTCCGAGTCACCTGGGAAGTGCGGAAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: PGTPRTRRAHTV*APSHLGSAETD Trigger: GTCTGTTTCCGCACTTCCCAGGTGACTCGGAGCGCATACAGTGTGCGCACGGCGCGTGCGTGGCGTCCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | TGGCTCAGTAGGAAGTTATTGAGCGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGGTGCGCCAGGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: WLSRKLLSGDSS*RSAQLWCARRG Trigger: GCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 72 bp | CGGTGGTGGCCGTGGCTGTGTCCTGTAATCGCACGGTaGGCGGCTCGCGGTTCTGCAGGCACTTGCCATAGG | + |
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Preference number: 6 (lower is better) Translates to: RWWPWLCPVIAR*AARGSAGTCHR Trigger: CCTATGGCAAGTGCCTGCAGAACCGCGAGCCGCCCACCGTGCGATTACAGGACACAGCCACGGCCACCACCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS TCA 72 bp | GACGGATGCCCGGGCCGTGGCTCAGTAGGAAGTTATTaGGCGGCGACTCCTCGTGCAGGAGCGCCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: DGCPGRGSVGSY*AATPRAGAPSS Trigger: AGAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGGCATCCGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CAA 72 bp | AGACGGATGCCCGGGCCGTGGCTCAGTAGGAAGTTATaGAGCGGCGACTCCTCGTGCAGGAGCGCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RRMPGPWLSRKL*SGDSSCRSAQL Trigger: GAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGGCATCCGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CAA 90 bp | AGATTGAAGAGACGGATGCCCGGGCCGTGGCTCAGTAGGAAGTTATaGAGCGGCGACTCCTCGTGCAGGAGCGCCCAGCTCTGGTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RLKRRMPGPWLSRKL*SGDSSCRSAQLWCA Trigger: GGCGCACCAGAGCTGGGCGCTCCTGCACGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGGCATCCGTCTCTTCAATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | TTCCCAAAGCCAGGGGTAGGCACTGGACAGTTCATGTaGGACGACTGGGCAATGCGAGGCTCGGGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: FPKPGVGTGQFM*DDWAMRGSGTG Trigger: TCCTGTCCCCGAGCCTCGCATTGCCCAGTCGTCGCACATGAACTGTCCAGTGCCTACCCCTGGCTTTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 72 bp | GTGGCGGTGAGATTGAAGAGACGGATGCCCGGGCCGTaGCTCAGTAGGAAGTTATTGAGCGGCGACTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VAVRLKRRMPGP*LSRKLLSGDSS Trigger: CGAGGAGTCGCCGCTCAATAACTTCCTACTGAGCCACGGCCCGGGCATCCGTCTCTTCAATCTCACCGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | GCGAGGCTCGGGGACAGGAATGTCCCCATGAGAGGATaGATGTGCTTTCTCGGCATTCAGCCGAGCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ARLGDRNVPMRG*MCFLGIQPSQF Trigger: GAACTGGCTCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAGCCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS TCA 72 bp | TGGGCAATGCGAGGCTCGGGGACAGGAATGTCCCCATaGGAGGATGCATGTGCTTTCTCGGCATTCAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: WAMRGSGTGMSP*EDACAFSAFSR Trigger: TCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAGCCTCGCATTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | CTCGGGGACAGGAATGTCCCCATGAGAGGATGCATGTaGTTTCTCGGCATTCAGCCGAGCCAGTTCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: LGDRNVPMRGCM*FLGIQPSQFMV Trigger: GACCATGAACTGGCTCGGCTGAATGCCGAGAAAGCACATGCATCCTCTCATGGGGACATTCCTGTCCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 72 bp | AATCTCTTCGACTTTCCCAAAGCCAGGGGTAGGCACTaGACAGTTCATGTGCGACGACTGGGCAATGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: NLFDFPKARGRH*TVHVRRLGNAR Trigger: CCTCGCATTGCCCAGTCGTCGCACATGAACTGTCCAGTGCCTACCCCTGGCTTTGGGAAAGTCGAAGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS TCA 72 bp | AGAGTGATTATTGGGCATCCAGTCCCTCACAGAGGGTaGTCCACGATACACGGGCACAGCACCCAGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: RVIIGHPVPHRG*STIHGHSTQMH Trigger: ATGCATCTGGGTGCTGTGCCCGTGTATCGTGGATCACCCTCTGTGAGGGACTGGATGCCCAATAATCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 72 bp | GTGATCCACGATACACGGGCACAGCACCCAGATGCATaGGGCGCCACAGTTTTTCTGTCATGTAATCATTGC | + |
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Preference number: 6 (lower is better) Translates to: VIHDTRAQHPDA*GATVFLSCNHC Trigger: GCAATGATTACATGACAGAAAAACTGTGGCGCCCCATGCATCTGGGTGCTGTGCCCGTGTATCGTGGATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CCA 72 bp | GGCGCCACAGTTTTTCTGTCATGTAATCATTGCAGATaGCATTCTCCAGAGCTAAGTGGAACTTATACCGGG | + |
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Preference number: 6 (lower is better) Translates to: GATVFLSCNHCR*HSPELSGTYTG Trigger: CCCGGTATAAGTTCCACTTAGCTCTGGAGAATGCCATCTGCAATGATTACATGACAGAAAAACTGTGGCGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CAA 90 bp | TCCAGGTTATCCAGAAGAAACTGGTTGGTGATGCCTCCAGGCTGCTaGTATGCCAGGTATTTCATATACTCGTCATCATTTTTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRLSRRNWLVMPPGC*YARYFIYSSSFLSR Trigger: TCTGGACAAAAATGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTTCTGGATAACCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | TTATCCAGAAGAAACTGGTTGGTGATGCCTCCAGGCTaGTTGTATGCCAGGTATTTCATATACTCGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LSRRNWLVMPPG*LYARYFIYSSS Trigger: TGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTTCTGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS CAA 72 bp | TCCAGAAGAAACTGGTTGGTGATGCCTCCAGGCTGCTaGTATGCCAGGTATTTCATATACTCGTCATCATTT | + |
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Preference number: 6 (lower is better) Translates to: SRRNWLVMPPGC*YARYFIYSSSF Trigger: AAATGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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| CDS GCA 72 bp | AAGAAACTGGTTGGTGATGCCTCCAGGCTGCTTGTATaGCAGGTATTTCATATACTCGTCATCATTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: KKLVGDASRLLV*QVFHILVIIFV Trigger: GACAAAAATGATGACGAGTATATGAAATACCTGGCATACAAGCAGCCTGGAGGCATCACCAACCAGTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048016.3 |
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