Pregenerated sensors for FUT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008461Ensembl transcript IDs: ENSMUST00000008605.6, ENSMUST00000209379.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGTGCCTCCAGCAGCATCACTCCGTGCTTCCAGCATCACTCCGTaGCTCCAGCATCACTCCGTGCCTCCAGCAGCATCACTCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: SVPPAASLRASSITP*LQHHSVPPAASLCA Trigger: GGCACAGAGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGCTGGAGGCACGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR GCA 90 bp | CACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTaGCTCCAGCAGCATCACTCTGTGCCTCTAGCATCACTCCGTGCC | + |
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Preference number: 1 (lower is better) Translates to: HSVLPASLRASSITP*LQQHHSVPLASLRA Trigger: GGCACGGAGTGATGCTAGAGGCACAGAGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 90 bp | GGGTTCTGGGTTCTAGGTTCTGGAACACCTTCAGACCCTTTACCCTaGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GFWVLGSGTPSDPLP*IFSEPDLGTLWAQG Trigger: CCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCCAGGGTAAAGGGTCTGAAGGTGTTCCAGAACCTAGAACCCAGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 90 bp | AGAAGACGAGCCAGAAGAGTCGGAAGAGACTGTGGCTTACAGTGCTaGCTTGGGCTTCCCCTGCAATCAGAAAATGATATCCTGTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: RRRARRVGRDCGLQC*LGLPLQSENDILLK Trigger: CTTCAACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAGCCACAGTCTCTTCCGACTCTTCTGGCTCGTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 90 bp | CTGTGGCTTACAGTGCTGACTTGGGCTTCCCCTGCAATCAGAAAATaGTATCCTGTTGAAGTGTCTGCAAAGCATTCCAGCATTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LWLTVLTWASPAIRK*YPVEVSAKHSSISS Trigger: GCTGGAAATGCTGGAATGCTTTGCAGACACTTCAACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAGCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 90 bp | GAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACTaGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCAGCATCACTC | + |
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Preference number: 1 (lower is better) Translates to: EFICPPIVLISLTRD*LQKGSNHSVPPASL Trigger: GAGTGATGCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 90 bp | AGTGCTGACTTGGGCTTCCCCTGCAATCAGAAAATGATATCCTGTTaGAGTGTCTGCAAAGCATTCCAGCATTTCCAGCAAGTTGATGTG | + |
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Preference number: 1 (lower is better) Translates to: SADLGFPCNQKMISC*SVCKAFQHFQQVDV Trigger: CACATCAACTTGCTGGAAATGCTGGAATGCTTTGCAGACACTTCAACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR TCA 90 bp | CGTGCCTCCAGCATCACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCAGCACACTGTCTGGAGTGTTaGGAGGGCCCTGCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RASSITPCFQHHSVPPAAHCLEC*EGPAEC Trigger: ACACTCTGCAGGGCCCTCTCAACACTCCAGACAGTG...TGCTGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGGAGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR GCA 90 bp | GGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCTCCAGCATCACTCCGTaGCTCCAGCAGCATCACTCT | + |
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Preference number: 2 (lower is better) Translates to: GSSQSQIWGLCGPRGMPFSSITP*LQQHHS Trigger: AGAGTGATGCTGCTGGAGGCACGGAGTGATGCTGGA...GAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR GCA 90 bp | AGATCTTTTAGGAGACCCCGTGCCTCGAGACAGATGTGTCTCAACAGCGGCTCTTCCAGCATCACTCCGTaGCTCCAGCATCACTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: RSFRRPRASRQMCLNSGSSSITP*LQHHSV Trigger: CACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGA...AGAGCCGCTGTTGAGACACATCTGTCTCGAGGCACGGGGTCTCCTAAAAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CCA 90 bp | GGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCTCTTTCAGGTTTCTCTaGGGCCAAGGAGTTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: GSSQSQIWGLCGPRGMPFSFRFL*GQGVGQ Trigger: CTGTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGA...GAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR TCA 90 bp | GGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCGCAGTGAGGAAGTACTaGGCTTTTGCATCTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSSQSQIWGLCGPRGMPFAVRKY*AFASTF Trigger: GAAGGTAGATGCAAAAGCTCAGTACTTCCTCACTGC...GAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTGCCTCCAGCAGCATCACTTCCAGCAAGTTGATGTaGAAGTCTGGAAATGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: FQHHSVPPASLRASSSITSSKLM*KSGNEY Trigger: GTACTCATTTCCAGACTTGCACATCAACTTGCTGGA...AGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCATCCTAAATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTTGGACTCCAGCATCACTCCGTaGCTCCAGCAGCATCACTCC | + |
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Preference number: 2 (lower is better) Translates to: LPILNKSLSGFSGAKELDSSITP*LQQHHS Trigger: GGAGTGATGCTGCTGGAGGCACGGAGTGATGCTGGA...GTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATTTAGGATGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCGTGTTGCAAAGGGACTaGACCAGGTTCTCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: HLSNKRLAPERLESLRASVLQRD*TRFSET Trigger: TGTTTCTGAGAACCTGGTCCAGTCCCTTTGCAACAC...GGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CAA 90 bp | TATCCTGTTGAAGTGTCTGCAAAGCATTCCAGCATTTCCAGCAAGTaGATGTGCAAGTCTGGAAATGAGTACCCACAGCTCCAGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: YPVEVSAKHSSISSK*MCKSGNEYPQLQGY Trigger: GTAGCCCTGGAGCTGTGGGTACTCATTTCCAGACTTGCACATCAACTTGCTGGAAATGCTGGAATGCTTTGCAGACACTTCAACAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGATCCCCTAATAGCATCTTCAGAAGAAGAAACCTCCTTGATCCTAAACTTACAGTGCTGACTTaGGCTTCCCCTGCAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: DPRSPNSIFRRRNLLDPKLTVLT*ASPAIR Trigger: TCTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAG...TTTAGGATCAAGGAGGTTTCTTCTTCTGAAGATGCTATTAGGGGATCTGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCATCCTAAATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTTGGACTCTCTAACAAGAGACTaGCTCCAGAAAGGCTCGAAT | + |
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Preference number: 2 (lower is better) Translates to: LPILNKSLSGFSGAKELDSLTRD*LQKGSN Trigger: ATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGA...GTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATTTAGGATGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACTGGCTCCAAGTCGGAAGAGACTGTaGCTTACAGTGCTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: RIHMSSNCSHLSNKRLAPSRKRL*LTVLTW Trigger: CCAAGTCAGCACTGTAAGCCACAGTCTCTTCCGACT...TGGAGCCAGTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGACAGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACGACTTGGGCTTCCCCTaGAATCAGAAAATGATATCC | + |
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Preference number: 2 (lower is better) Translates to: SWTEFICPPIVLISLTRDDLGFP*NQKMIS Trigger: GGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTC...GTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCTGTCCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACTGGCTCCAAAAATGATATCCTGTTaGAGTGTCTGCAAAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: RIHMSSNCSHLSNKRLAPKMISC*SVCKAF Trigger: GAATGCTTTGCAGACACTTCAACAGGATATCATTTT...TGGAGCCAGTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGCATCACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTCACTGTCTGGAGTGTaGAGAGGGCCCTGCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: QQHHSVLPASLRASSITPSLSGV*RGPCRV Trigger: CACTCTGCAGGGCCCTCTCAACACTCCAGACAGTGA...CGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR GCA 72 bp | CCTCCAGCATCACTCCGTGCTTCCAGCATCACTCCGTaGCTCCAGCAGCATCACTCCGTGCTTCCAGCATCA | + |
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Preference number: 3 (lower is better) Translates to: PPASLRASSITP*LQQHHSVLPAS Trigger: TGATGCTGGAAGCACGGAGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGGAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR GCA 72 bp | CAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTaGCTCCAGCATCACTCCGTGCTTCCAGCATCACTC | + |
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Preference number: 3 (lower is better) Translates to: QETGSRKARITP*LQHHSVLPASL Trigger: GAGTGATGCTGGAAGCACGGAGTGATGCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CAA 90 bp | CTACCTTCATTAAATTCTTCACTGTCTGGAGTGTTGAGAGGGCCCTGCAGAGTGGCTTACAGTGCTGACTaGGGCTTCCCCTGCAATCAG | + |
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Preference number: 3 (lower is better) Translates to: LPSLNSSLSGVLRGPCRVAYSAD*GFPCNQ Trigger: CTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAGC...CACTCTGCAGGGCCCTCTCAACACTCCAGACAGTGAAGAATTTAATGAAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 72 bp | ATTCACAGCTCCCTCTCCAGCCTGTACAGGCCAACTTaGGAAAAAGTGCCCGGAAACTCCCTGAGAAGAATA | + |
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Preference number: 3 (lower is better) Translates to: IHSSLSSLYRPT*EKVPGNSLRRI Trigger: TATTCTTCTCAGGGAGTTTCCGGGCACTTTTTCCCAAGTTGGCCTGTACAGGCTGGAGAGGGAGCTGTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 72 bp | CAGCATTTCCAGCAAGTTGATGTGCAAGTCTGGAAATaGGTACCCACAGCTCCAGGGCTACCACAGACATAC | + |
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Preference number: 3 (lower is better) Translates to: QHFQQVDVQVWK*VPTAPGLPQTY Trigger: GTATGTCTGTGGTAGCCCTGGAGCTGTGGGTACTCATTTCCAGACTTGCACATCAACTTGCTGGAAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 72 bp | GCCAGAAGAGTCGGAAGAGACTGTGGCTTACAGTGCTaGCTTGGGCTTCCCCTGCAATCAGAAAATGATATC | + |
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Preference number: 3 (lower is better) Translates to: ARRVGRDCGLQC*LGLPLQSENDI Trigger: GATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAGCCACAGTCTCTTCCGACTCTTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 72 bp | CTCTGTGCCTCTAGCATCACTCCGTGCCTCCAGCAGTaGGGAAGTACTGAGCTTTTGCATCTACCTTCATTA | + |
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Preference number: 3 (lower is better) Translates to: LCASSITPCLQQ*GSTELLHLPSL Trigger: TAATGAAGGTAGATGCAAAAGCTCAGTACTTCCTCACTGCTGGAGGCACGGAGTGATGCTAGAGGCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR GCA 72 bp | TCTGCAAAGCATTCCAGCATTTCCAGCAAGTTGATGTaGAAGTCTGGAAATGAGTACCCACAGCTCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: SAKHSSISSKLM*KSGNEYPQLQG Trigger: GCCCTGGAGCTGTGGGTACTCATTTCCAGACTTGCACATCAACTTGCTGGAAATGCTGGAATGCTTTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR GCA 72 bp | TTAAATTCTTCACTGTCTGGAGTGTTGAGAGGGCCCTaGAGAGTGTTGCAAAGGGACTGGACCAGGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LNSSLSGVLRGP*RVLQRDWTRFS Trigger: TGAGAACCTGGTCCAGTCCCTTTGCAACACTCTGCAGGGCCCTCTCAACACTCCAGACAGTGAAGAATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 72 bp | TGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACTaGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: CPPIVLISLTRD*LQKGSNHSVPP Trigger: TGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 72 bp | GTTCTAGGTTCTGGAACACCTTCAGACCCTTTACCCTaGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: VLGSGTPSDPLP*IFSEPDLGTLW Trigger: CCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCCAGGGTAAAGGGTCTGAAGGTGTTCCAGAACCTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCTTAATCCAGGAGACCAGTaGGTAAGTCTGGATTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: IFSEPDLGTLWAQGYALLNPGDQ*VSLDFL Trigger: AAGAAAATCCAGACTTACCAACTGGTCTCCTGGATT...AAGAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR-3UTR CAA 90 bp | AGTTGGACAGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACGGGCCCTGCAGAGTGTaGCAAAGGGACTGGACCAGG | + |
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Preference number: 3 (lower is better) Translates to: SWTEFICPPIVLISLTRDGPCRV*QRDWTR Trigger: CCTGGTCCAGTCCCTTTGCAACACTCTGCAGGGCCC...GTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCTGTCCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 72 bp | AAGTGTCTGCAAAGCATTCCAGCATTTCCAGCAAGTTaGTGTGCAAGTCTGGAAATGAGTACCCACAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KCLQSIPAFPAS*CASLEMSTHSS Trigger: GGAGCTGTGGGTACTCATTTCCAGACTTGCACATCAACTTGCTGGAAATGCTGGAATGCTTTGCAGACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR TCA 72 bp | ACAGTGCTGACTTGGGCTTCCCCTGCAATCAGAAAATaGTATCCTGTTGAAGTGTCTGCAAAGCATTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: TVLTWASPAIRK*YPVEVSAKHSS Trigger: GCTGGAATGCTTTGCAGACACTTCAACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| 3UTR CCA 72 bp | GCTTTTGCATCTACCTTCATTAAATTCTTCACTGTCTaGAGTGTTGAGAGGGCCCTGCAGAGTGTTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: AFASTFIKFFTV*SVERALQSVAK Trigger: CTTTGCAACACTCTGCAGGGCCCTCTCAACACTCCAGACAGTGAAGAATTTAATGAAGGTAGATGCAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | CATCTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCACACCCACAAAGGTATaGGGGCGGATGCCCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: HLSNKRLAPERLESLRASTPTKV*GRMPAG Trigger: CCCGGCGGGCATCCGCCCTCATACCTTTGTGGGTGT...GGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | TTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTGCCTCCAGCAGCATCACTAGGCAGCCTCAGGCCTaGAGATCTTCAGAAACTCCG | + |
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Preference number: 4 (lower is better) Translates to: FQHHSVPPASLRASSSITRQPQA*RSSETP Trigger: CGGAGTTTCTGAAGATCTTCAGGCCTGAGGCTGCCT...AGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCATCACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTCATGCCATTGCTGGTaGCCACAAAGATGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QQHHSVLPASLRASSITPSCHCW*PQRWGL Trigger: AAGACCCCATCTTTGTGGTCACCAGCAATGGCATGA...CGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | CTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCAGCGGGACAAGTCTGCATTaGTGCCCACCCACTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSNKRLAPERLESLRASSGTSLH*CPPTQA Trigger: TGCCTGAGTGGGTGGGCATCAATGCAGACTTGTCCC...GCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | AGCATCACTCCGTGCCTCCAGCAGCATCACTCCGTGCTTCCAGCATCACTCCGTCAGCAGGTGATAGTCTaGACACAGGACAGAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SITPCLQQHHSVLPASLRQQVIV*TQDRES Trigger: ACTCTCTCTGTCCTGTGTTCAGACTATCACCTGCTG...ACGGAGTGATGCTGGAAGCACGGAGTGATGCTGCTGGAGGCACGGAGTGATGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR TCA 90 bp | AGATCTTTTAGGAGACCCCGTGCCTCGAGACAGATGTGTCTCAACAGCGGCTCTCCAAGTCCCAGAGAGTaGGGAGGACTGCTCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RSFRRPRASRQMCLNSGSPSPRE*GGLLRT Trigger: TGTCCTGAGCAGTCCTCCTCACTCTCTGGGACTTGG...AGAGCCGCTGTTGAGACACATCTGTCTCGAGGCACGGGGTCTCCTAAAAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR GCA 90 bp | CTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCAGCACAGACCAACAGAAATaGCAGGCAGAGCTGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSNKRLAPERLESLRASSTDQQK*QAELPP Trigger: CGGAGGCAGCTCTGCCTGGCATTTCTGTTGGTCTGT...GCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR GCA 90 bp | AGATCTTTTAGGAGACCCCGTGCCTCGAGACAGATGTGTCTCAACAGCGGCTCTGAGAGTGAGGAGGACTaGTCAGGACAGGAAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSFRRPRASRQMCLNSGSESEED*SGQEGE Trigger: CTCCCCTTCCTGTCCTGAGCAGTCCTCCTCACTCTC...AGAGCCGCTGTTGAGACACATCTGTCTCGAGGCACGGGGTCTCCTAAAAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR CCA 90 bp | GGATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCCACCCTTCCAGCGATTaGGCATCACCTCCAGATAGT | + |
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Preference number: 4 (lower is better) Translates to: GSSQSQIWGLCGPRGMPFHPSSD*ASPPDS Trigger: ACTATCTGGAGGTGATGCCCAATCGCTGGAAGGGTG...GAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTGCCTCCAGCAGCATCACTTTTCCTCCATTCAGGTaGAAAAAGAAGGAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQHHSVPPASLRASSSITFPPFR*KKKEPA Trigger: TGCCGGCTCCTTCTTTTTCCACCTGAATGGAGGAAA...AGTGATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CCA 90 bp | CGTGCCTCCAGCATCACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCAGCATCTAAAAAGACTGTCTaGCTTCCAGGGGTCAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RASSITPCFQHHSVPPAASKKTV*LPGVKL Trigger: CAATTTGACCCCTGGAAGCCAGACAGTCTTTTTAGA...TGCTGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGGAGGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCAGCTCATGTAGGACTAAGTaGTGCCAAGGTGTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNKRLAPERLESLRASSSCRTK*CQGVRL Trigger: CAGCCTCACACCTTGGCAGCACTTAGTCCTACATGA...GCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTAACAAGAGACTGGCTCCAGAAAGGCTCGAATCACTCCGTGCCTCCAGCACACTGTGTGAGAAGTaGAAAGTCCTTCCCCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNKRLAPERLESLRASSTLCEK*KVLPRC Trigger: ACACCGGGGAAGGACTTTGCACTTCTCACACAGTGT...GCTGGAGGCACGGAGTGATTCGAGCCTTTCTGGAGCCAGTCTCTTGTTAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATCCTAAATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTTGGACAGTGCTGCCAAGGTGTaGGGCTGTCCACCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPILNKSLSGFSGAKELDSAAKV*GCPPQG Trigger: ACCCTGAGGTGGACAGCCTCACACCTTGGCAGCACT...GTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATTTAGGATGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR TCA 90 bp | TCACTCCGTGCCTCCAGCAGTGAGGAAGTACTGAGCTTTTGCATCTACCTTCATCCGAATCTGGCAGGGTaGAGTTTGCAAGGTAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLRASSSEEVLSFCIYLHPNLAG*SLQGRP Trigger: CGGTCTACCTTGCAAACTTCACCCTGCCAGATTCGG...ATGAAGGTAGATGCAAAAGCTCAGTACTTCCTCACTGCTGGAGGCACGGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | ATCACACATACCCAATCTCAGCCAAACGTCCCATCCTTGTTTCAAGCCCGGGCTTACCCTCCTGTCCATTaGCAGCGAAGACCACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITHTQSQPNVPSLFQARAYPPVH*QRRPHH Trigger: GTGATGTGGTCTTCGCTGGCAATGGACAGGAGGGTA...AGCCCGGGCTTGAAACAAGGATGGGACGTTTGGCTGAGATTGGGTATGTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR TCA 90 bp | AGATCTTTTAGGAGACCCCGTGCCTCGAGACAGATGTGTCTCAACAGCGGCTCTTGTGGTTACACTGTGTaGGAAGTGCAAAGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSFRRPRASRQMCLNSGSCGYTV*EVQSPS Trigger: GGAAGGACTTTGCACTTCTCACACAGTGTAACCACA...AGAGCCGCTGTTGAGACACATCTGTCTCGAGGCACGGGGTCTCCTAAAAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CCA 90 bp | AGATCTTTTAGGAGACCCCGTGCCTCGAGACAGATGTGTCTCAACAGCGGCTCTCAGAAACTCCGAATCTaGCAGGGTGAAGTTTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSFRRPRASRQMCLNSGSQKLRI*QGEVCK Trigger: CTTGCAAACTTCACCCTGCCAGATTCGGAGTTTCTG...AGAGCCGCTGTTGAGACACATCTGTCTCGAGGCACGGGGTCTCCTAAAAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CCA 90 bp | ATCACACATACCCAATCTCAGCCAAACGTCCCATCCTTGTTTCAAGCCCGGGCTAAGACCACATCACCATaGGATGTGTCAATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITHTQSQPNVPSLFQARAKTTSP*DVSMFS Trigger: GGAGAACATTGACACATCCCATGGTGATGTGGTCTT...AGCCCGGGCTTGAAACAAGGATGGGACGTTTGGCTGAGATTGGGTATGTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | GAAGAGTCGGAAGAGACTGTGGCTTACAGTGCTGACTaGGGCTTCCCCTGCAATCAGAAAATGATATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EESEETVAYSAD*GFPCNQKMISC Trigger: ACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAGTCAGCACTGTAAGCCACAGTCTCTTCCGACTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | CATCTACCTTCATTAAATTCTTCACTGTCTGGAGTGTaGAGAGGGCCCTGCAGAGTGTTGCAAAGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPSLNSSLSGV*RGPCRVLQRDW Trigger: CCAGTCCCTTTGCAACACTCTGCAGGGCCCTCTCAACACTCCAGACAGTGAAGAATTTAATGAAGGTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCCATCCTAAATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTTGGACAATGGGTCCTCCAGATaGGAGTACTCCTCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LPILNKSLSGFSGAKELDNGSSR*EYSSDI Trigger: GATGTCAGAGGAGTACTCCCATCTGGAGGACCCATT...GTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATTTAGGATGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGATCCCCTAATAGCATCTTCAGAAGAAGAAACCTCCTTGATCCTAAATGTAGGACTAAGTGCTaGCAAGGTGTGAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPRSPNSIFRRRNLLDPKCRTKC*QGVRLS Trigger: GGACAGCCTCACACCTTGGCAGCACTTAGTCCTACA...TTTAGGATCAAGGAGGTTTCTTCTTCTGAAGATGCTATTAGGGGATCTGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | AGTTGGACAGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACCAGCGGGGACAAGTCTaGATTGATGCCCACCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SWTEFICPPIVLISLTRDQRGQV*IDAHPL Trigger: GAGTGGGTGGGCATCAATGCAGACTTGTCCCCGCTG...GTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCTGTCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | GAAGTGTCTGCAAAGCATTCCAGCATTTCCAGCAAGTaGATGTGCAAGTCTGGAAATGAGTACCCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVSAKHSSISSK*MCKSGNEYPQL Trigger: GAGCTGTGGGTACTCATTTCCAGACTTGCACATCAACTTGCTGGAAATGCTGGAATGCTTTGCAGACACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATCCTAAATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTTGGACATCTGTTCCCGAAGATaGTGGAAAAAGGTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPILNKSLSGFSGAKELDICSRR*WKKVQE Trigger: CTCTTGGACCTTTTTCCATCATCTTCGGGAACAGAT...GTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATTTAGGATGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | CTTGGGCTTCCCCTGCAATCAGAAAATGATATCCTGTaGAAGTGTCTGCAAAGCATTCCAGCATTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLPLQSENDIL*KCLQSIPAFPA Trigger: TGCTGGAAATGCTGGAATGCTTTGCAGACACTTCAACAGGATATCATTTTCTGATTGCAGGGGAAGCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR TCA 90 bp | AGTTGGACAGAATTCATATGTCCTCCAATTGTTCTCATCTCTCTAACAAGAGACGGAAACCAGACAGCTTaGGAAATGGGTCCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWTEFICPPIVLISLTRDGNQTA*EMGPPD Trigger: ATCTGGAGGACCCATTTCTCAAGCTGTCTGGTTTCC...GTCTCTTGTTAGAGAGATGAGAACAATTGGAGGACATATGAATTCTGTCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGATCCCCTAATAGCATCTTCAGAAGAAGAAACCTCCTTGATCCTAAATCCCGTAGATGGTTATaGAGAGTGAATTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: DPRSPNSIFRRRNLLDPKSRRWL*RVNSLR Trigger: TCGTAGGGAATTCACTCTGCATAACCATCTACGGGA...TTTAGGATCAAGGAGGTTTCTTCTTCTGAAGATGCTATTAGGGGATCTGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | AATAAAAGTCTTTCAGGTTTCTCTGGGGCCAAGGAGTaGGACAGAATTCATATGTCCTCCAATTGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKSLSGFSGAKE*DRIHMSSNCSH Trigger: ATGAGAACAATTGGAGGACATATGAATTCTGTCCAACTCCTTGGCCCCAGAGAAACCTGAAAGACTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| 3UTR CAA 72 bp | GATCCCCTAATAGCATCTTCAGAAGAAGAAACCTCCTaGATCCTAAATCCAAGATTAATCTGTGTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPLIASSEEETS*ILNPRLICVVL Trigger: AAGAACAACACAGATTAATCTTGGATTTAGGATCAAGGAGGTTTCTTCTTCTGAAGATGCTATTAGGGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CAA 90 bp | CGTGCCTCCAGCATCACTCCGTGCTTCCAGCATCACTCCGTGCCTCCAGCAGCAGAACCAGTCCATGGCTaGCTGGAGGTAAGCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RASSITPCFQHHSVPPAAEPVHG*LEVSSV Trigger: GACCGAGCTTACCTCCAGCAAGCCATGGACTGGTTC...TGCTGCTGGAGGCACGGAGTGATGCTGGAAGCACGGAGTGATGCTGGAGGCACG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS CCA 90 bp | AACACGGGGGCCAGGGCGGCATGCATCTCAGGTTGGATGAAGGCTTaGCGACCATTGAGCTGGGCTAGGGCCAGCAATGTAGCATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTGARAACISGWMKA*RPLSWARASNVAYC Trigger: GCAGTATGCTACATTGCTGGCCCTAGCCCAGCTCAATGGTCGCCAAGCCTTCATCCAACCTGAGATGCATGCCGCCCTGGCCCCCGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCCAGCATCACTCCGTGCCTCCAGCATCACTCCGTGCCTCCAGCAGCATGGCATGCATCTCAGGTaGGATGAAGGCTTGGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLPASLRASSITPCLQQHGMHLR*DEGLAT Trigger: GGTCGCCAAGCCTTCATCCAACCTGAGATGCATGCC...ATGCTGCTGGAGGCACGGAGTGATGCTGGAGGCACGGAGTGATGCTGGAAGCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS CCA 90 bp | CTTGCTGGAGGTAAGCTCGGTCACCCACCACACCCTTCCAGCGATTaGGCATCACCTCCAGATAGTCTCCACGACGCACATGGACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAGGKLGHPPHPSSD*ASPPDSLHDAHGHP Trigger: TGGGTGTCCATGTGCGTCGTGGAGACTATCTGGAGGTGATGCCCAATCGCTGGAAGGGTGTGGTGGGTGACCGAGCTTACCTCCAGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS GCA 90 bp | AGATGGGAGTACTCCTCTGACATCCAGTCATGTAGGACTAAGTGCTaGCAAGGTGTGAGGCTGTCCACCTCAGGGTCCAGCACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWEYSSDIQSCRTKC*QGVRLSTSGSSTGR Trigger: CCTGCCAGTGCTGGACCCTGAGGTGGACAGCCTCACACCTTGGCAGCACTTAGTCCTACATGACTGGATGTCAGAGGAGTACTCCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CCA 90 bp | CCATTGAGCTGGGCTAGGGCCAGCAATGTAGCATACTGCCCCATCTaGTTACCAAACCTGCCTCCTGGGGTGATTGTCCAAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSWARASNVAYCPI*LPNLPPGVIVQVPE Trigger: CTCTGGGACTTGGACAATCACCCCAGGAGGCAGGTTTGGTAACCAGATGGGGCAGTATGCTACATTGCTGGCCCTAGCCCAGCTCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCTGGAAATGAGTACCCACAGCTCCAGGGCTACCACAGACATACACCAAGGGGACAAGTCTGCATaGATGCCCACCCACTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLEMSTHSSRATTDIHQGDKSA*MPTHSG Trigger: GCCTGAGTGGGTGGGCATCAATGCAGACTTGTCCCC...TTGGTGTATGTCTGTGGTAGCCCTGGAGCTGTGGGTACTCATTTCCAGACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCAGAGCCAGATTTGGGGACTTTGTGGGCCCAGGGGTATGCCCTTCTTGTACCCTCCTGTCCATaGCCAGCGAAGACCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: IFSEPDLGTLWAQGYALLVPSCP*PAKTTS Trigger: TGATGTGGTCTTCGCTGGCAATGGACAGGAGGGTAC...AAGAAGGGCATACCCCTGGGCCCACAAAGTCCCCAAATCTGGCTCTGAGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS TCA 90 bp | GAAGATGATGGAAAAAGGTCCAAGAGCAGGGGAAACCAGACAGCTTaGGAAATGGGTCCTCCAGATGGGAGTACTCCTCTGACATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EDDGKRSKSRGNQTA*EMGPPDGSTPLTSS Trigger: ACTGGATGTCAGAGGAGTACTCCCATCTGGAGGACCCATTTCTCAAGCTGTCTGGTTTCCCCTGCTCTTGGACCTTTTTCCATCATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS TCA 90 bp | AGATGGTTATGCAGAGTGAATTCCCTACGAATCTGTTCCCGAAGATaGTGGAAAAAGGTCCAAGAGCAGGGGAAACCAGACAGCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWLCRVNSLRICSRR*WKKVQEQGKPDSLR Trigger: TCTCAAGCTGTCTGGTTTCCCCTGCTCTTGGACCTTTTTCCATCATCTTCGGGAACAGATTCGTAGGGAATTCACTCTGCATAACCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGATCCCCTAATAGCATCTTCAGAAGAAGAAACCTCCTTGATCCTAAAGGGAAACCAGACAGCTaGAGAAATGGGTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DPRSPNSIFRRRNLLDPKGKPDS*RNGSSR Trigger: TCTGGAGGACCCATTTCTCAAGCTGTCTGGTTTCCC...TTTAGGATCAAGGAGGTTTCTTCTTCTGAAGATGCTATTAGGGGATCTGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS CCA 90 bp | ACAGAGAGAGTTAGACCATTTCGAAAGAAGTTTCCTCCATTCAGGTaGAAAAAGAAGGAGCCGGCAGAGAGCACACAGACCAACAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TERVRPFRKKFPPFR*KKKEPAESTQTNRN Trigger: ATTTCTGTTGGTCTGTGTGCTCTCTGCCGGCTCCTTCTTTTTCCACCTGAATGGAGGAAACTTCTTTCGAAATGGTCTAACTCTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS CCA 72 bp | CGGAACACGGGGGCCAGGGCGGCATGCATCTCAGGTTaGATGAAGGCTTGGCGACCATTGAGCTGGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNTGARAACISG*MKAWRPLSWAR Trigger: CCTAGCCCAGCTCAATGGTCGCCAAGCCTTCATCCAACCTGAGATGCATGCCGCCCTGGCCCCCGTGTTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CAA 90 bp | GCCAGGGCGGCATGCATCTCAGGTTGGATGAAGGCTTGGCGACCATaGAGCTGGGCTAGGGCCAGCAATGTAGCATACTGCCCCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARAACISGWMKAWRP*SWARASNVAYCPIW Trigger: CCAGATGGGGCAGTATGCTACATTGCTGGCCCTAGCCCAGCTCAATGGTCGCCAAGCCTTCATCCAACCTGAGATGCATGCCGCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CCA 72 bp | GCCAGGGCGGCATGCATCTCAGGTTGGATGAAGGCTTaGCGACCATTGAGCTGGGCTAGGGCCAGCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: ARAACISGWMKA*RPLSWARASNV Trigger: TACATTGCTGGCCCTAGCCCAGCTCAATGGTCGCCAAGCCTTCATCCAACCTGAGATGCATGCCGCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CCA 72 bp | GGTAAGCTCGGTCACCCACCACACCCTTCCAGCGATTaGGCATCACCTCCAGATAGTCTCCACGACGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GKLGHPPHPSSD*ASPPDSLHDAH Trigger: ATGTGCGTCGTGGAGACTATCTGGAGGTGATGCCCAATCGCTGGAAGGGTGTGGTGGGTGACCGAGCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS TCA 72 bp | ACTGCCCCATCTGGTTACCAAACCTGCCTCCTGGGGTaGTTGTCCAAGTCCCAGAGAGTGAGGAGGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TAPSGYQTCLLG*LSKSQRVRRTA Trigger: AGCAGTCCTCCTCACTCTCTGGGACTTGGACAATCACCCCAGGAGGCAGGTTTGGTAACCAGATGGGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS GCA 72 bp | GGGGTGATTGTCCAAGTCCCAGAGAGTGAGGAGGACTaGTCAGGACAGGAAGGGGAGCCATTAGATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVIVQVPESEED*SGQEGEPLDVC Trigger: GCAGACATCTAATGGCTCCCCTTCCTGTCCTGAGCAGTCCTCCTCACTCTCTGGGACTTGGACAATCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS TCA 72 bp | GGACAGGAAGGGGAGCCATTAGATGTCTGCAATGGATaGGGTAGGCATACCATGGCCACTGGGGACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GQEGEPLDVCNG*GRHTMATGDFS Trigger: GCTGAAGTCCCCAGTGGCCATGGTATGCCTACCTCATCCATTGCAGACATCTAATGGCTCCCCTTCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
||
| CDS GCA 72 bp | TACTCCTCTGACATCCAGTCATGTAGGACTAAGTGCTaGCAAGGTGTGAGGCTGTCCACCTCAGGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSSDIQSCRTKC*QGVRLSTSGSS Trigger: GCTGGACCCTGAGGTGGACAGCCTCACACCTTGGCAGCACTTAGTCCTACATGACTGGATGTCAGAGGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CCA 72 bp | TGGGCTAGGGCCAGCAATGTAGCATACTGCCCCATCTaGTTACCAAACCTGCCTCCTGGGGTGATTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: WARASNVAYCPI*LPNLPPGVIVQ Trigger: TTGGACAATCACCCCAGGAGGCAGGTTTGGTAACCAGATGGGGCAGTATGCTACATTGCTGGCCCTAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS TCA 72 bp | GGAAAAAGGTCCAAGAGCAGGGGAAACCAGACAGCTTaGGAAATGGGTCCTCCAGATGGGAGTACTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GKRSKSRGNQTA*EMGPPDGSTPL Trigger: CAGAGGAGTACTCCCATCTGGAGGACCCATTTCTCAAGCTGTCTGGTTTCCCCTGCTCTTGGACCTTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CCA 72 bp | AGCCCGCTCAACAGGTACTGGGCACCTTCCCGTAGATaGTTATGCAGAGTGAATTCCCTACGAATCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPLNRYWAPSRR*LCRVNSLRICS Trigger: GGAACAGATTCGTAGGGAATTCACTCTGCATAACCATCTACGGGAAGGTGCCCAGTACCTGTTGAGCGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS CAA 72 bp | TGGAAAAAGGTCCAAGAGCAGGGGAAACCAGACAGCTaGAGAAATGGGTCCTCCAGATGGGAGTACTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WKKVQEQGKPDS*RNGSSRWEYSS Trigger: AGAGGAGTACTCCCATCTGGAGGACCCATTTCTCAAGCTGTCTGGTTTCCCCTGCTCTTGGACCTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
||
| CDS TCA 72 bp | GGTACTGGGCACCTTCCCGTAGATGGTTATGCAGAGTaGATTCCCTACGAATCTGTTCCCGAAGATGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTGHLPVDGYAE*IPYESVPEDDG Trigger: TCCATCATCTTCGGGAACAGATTCGTAGGGAATTCACTCTGCATAACCATCTACGGGAAGGTGCCCAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
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| CDS TCA 72 bp | TGCAGAGTGAATTCCCTACGAATCTGTTCCCGAAGATaGTGGAAAAAGGTCCAAGAGCAGGGGAAACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: CRVNSLRICSRR*WKKVQEQGKPD Trigger: GTCTGGTTTCCCCTGCTCTTGGACCTTTTTCCATCATCTTCGGGAACAGATTCGTAGGGAATTCACTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008605.6 ENSMUST00000209379.2 |
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| CDS CCA 72 bp | GTTAGACCATTTCGAAAGAAGTTTCCTCCATTCAGGTaGAAAAAGAAGGAGCCGGCAGAGAGCACACAGACC | + |
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Preference number: 6 (lower is better) Translates to: VRPFRKKFPPFR*KKKEPAESTQT Trigger: GGTCTGTGTGCTCTCTGCCGGCTCCTTCTTTTTCCACCTGAATGGAGGAAACTTCTTTCGAAATGGTCTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008605.6 |
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