Pregenerated sensors for FUS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030795Ensembl transcript IDs: ENSMUST00000077609.12, ENSMUST00000106251.10, ENSMUST00000121616.9, ENSMUST00000141997.2, ENSMUST00000174632.8
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGCCTACAACCAGGCTGGTTTTGAACTCAGTGATCCATCCACCTaGTTCTGCCCCAGTCCTAGGGCTGGATGTATAAATCACATCCCA | + |
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Preference number: 1 (lower is better) Translates to: LAYNQAGFELSDPST*FCPSPRAGCINHIP Trigger: TGGGATGTGATTTATACATCCAGCCCTAGGACTGGGGCAGAATCAGGTGGATGGATCACTGAGTTCAAAACCAGCCTGGTTGTAGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 90 bp | GATACCAGCCTGTACAACAGAGTCCCTGTTCAAAATAAATCAATGTaGAGACATTGGGAACTCTTGTCTAGCAGTGATTCTCTAGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: DTSLYNRVPVQNKSM*RHWELLSSSDSLGS Trigger: TGAACCTAGAGAATCACTGCTAGACAAGAGTTCCCAATGTCTGCACATTGATTTATTTTGAACAGGGACTCTGTTGTACAGGCTGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 90 bp | CACCTTCTATACAAACGTAGAAATTCTCTACAAATCAGGCCAACATaGTGCCTGTCTATAATCCCAGCAGTGGGAAAACTGGTAAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HLLYKRRNSLQIRPT*CLSIIPAVGKLVSF Trigger: GAAACTTACCAGTTTTCCCACTGCTGGGATTATAGACAGGCACCATGTTGGCCTGATTTGTAGAGAATTTCTACGTTTGTATAGAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 90 bp | TCTCAGCTGAAACACAATGTTGAGTTCAAAGCATCAAATGTCAAATaGCCTATAGACACAGCTGGATTTAGGCAAGATGTGATCCACTTA | + |
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Preference number: 1 (lower is better) Translates to: SQLKHNVEFKASNVK*PIDTAGFRQDVIHL Trigger: TAAGTGGATCACATCTTGCCTAAATCCAGCTGTGTCTATAGGTCATTTGACATTTGATGCTTTGAACTCAACATTGTGTTTCAGCTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATGTGAGTTCTACAAAGTaGGTTCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHVSSTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTAGAACTCAC...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCACTGACTCCTCTTCCAGAGGTCCTGAATTCAATTCCCAGCAACCACAGTCCATGTTGGCCTTaGACTTCTTCTGATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LRALTPLPEVLNSIPSNHSPCWP*TSSDPP Trigger: AGGAGGATCAGAAGAAGTTCAAGGCCAACATGGACT...GTGGTTGCTGGGAATTGAATTCAGGACCTCTGGAAGAGGAGTCAGTGCTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGGCTAATATGGCCTCTTCAAAGACTGGGTTCTaGACTTTTCTTCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HWVQEEFQNFRSQANMASSKTGF*TFLLPS Trigger: GGAAGGAAGAAGAAAAGTTCAGAACCCAGTCTTTGA...AGAGGCCATATTAGCCTGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGATCAGGCCAACATGGTaGCTGTCTATAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMIRPTW*LSIIPA Trigger: TGCTGGGATTATAGACAGGCACCATGTTGGCCTGAT...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR GCA 90 bp | AACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGGCTAATATGGCCTCACCCTTCAAGTCTCTaGTACCCAACAAATGACTTT | + |
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Preference number: 2 (lower is better) Translates to: NTGYRKSSRTSGARLIWPHPSSL*YPTNDF Trigger: AAAGTCATTTGTTGGGTAGCAGAGACTTGAAGGGTG...AGGCCATATTAGCCTGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTCTGCCTCCCCGGTGCTaGGATTACCAAGGTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TFSGGTNQWSALVNIMKTLPPRC*DYQGFQ Trigger: CTGAAAACCTTGGTAATCCCAGCACCGGGGAGGCAG...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAACTGTAGCCAGGAAGGGCACACACCTTTAATCCTAGCACCCAGGAGGCAGCTTCAGAAAGTAAACTaGGGGAAACAGAATTTAACT | + |
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Preference number: 2 (lower is better) Translates to: KNCSQEGHTPLILAPRRQLQKVN*GKQNLT Trigger: AGTTAAATTCTGTTTCCCCCAGTTTACTTTCTGAAG...CTGCCTCCTGGGTGCTAGGATTAAAGGTGTGTGCCCTTCCTGGCTACAGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAGATGTGCACCAGCATACTCAAAGCAGACAGAACACAGTACCTCACTATTTCCCAGCAACCACATaGTGGCTCACAACCATCTAT | + |
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Preference number: 2 (lower is better) Translates to: IADVHQHTQSRQNTVPHYFPATT*WLTTIY Trigger: ATAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA...ATAGTGAGGTACTGTGTTCTGTCTGCTTTGAGTATGCTGGTGCACATCTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATGGAGGTACAAATCAATaGTCAGCTCTTGTCAACATT | + |
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Preference number: 2 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHGGTNQ*SALVNI Trigger: AATGTTGACAAGAGCTGACCATTGATTTGTACCTCC...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGCATGCTAGAGAACTATaGAATTGGTTGGATGTGATG | + |
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Preference number: 2 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMHAREL*NWLDVM Trigger: CATCACATCCAACCAATTGCATAGTTCTCTAGCATG...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CCA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGTTAACTCAGGACTCCTaGAATAATAGCCAGTTACTC | + |
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Preference number: 2 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMLTQDS*NNSQLL Trigger: GAGTAACTGGCTATTATTCCAGGAGTCCTGAGTTAA...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCGCCTGGTCTACAAAGTaGGTTCTACAAAGTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KQVHARELCNWLDVMIHLAWSTK*VLQSEF Trigger: GAACTCACTTTGTAGAACTCACTTTGTAGACCAGGC...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CAA 90 bp | AGAGTCCCTGTTCAAAATAAATCAATGTGCAGACATTGGGAACTCTaGTCTAGCAGTGATTCTCTAGGTTCAATCCACAGGACTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: RVPVQNKSMCRHWEL*SSSDSLGSIHRTEN Trigger: ATTTTCAGTCCTGTGGATTGAACCTAGAGAATCACTGCTAGACAAGAGTTCCCAATGTCTGCACATTGATTTATTTTGAACAGGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR GCA 90 bp | ATTGCAGATGTGCACCAGCATACTCAAAGCAGACAGAACACAGTACCTCACTATCAAAATAAATCAATGTaGAGACATTGGGAACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: IADVHQHTQSRQNTVPHYQNKSM*RHWELL Trigger: CAAGAGTTCCCAATGTCTGCACATTGATTTATTTTG...ATAGTGAGGTACTGTGTTCTGTCTGCTTTGAGTATGCTGGTGCACATCTGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCTGTTCAAGGCCAGCATaGTCTATAAAGAAAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: KQVHARELCNWLDVMIHLCSRPA*SIKKNS Trigger: AGAGTTTTTCTTTATAGACCATGCTGGCCTTGAACA...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | TTAGCTGTCCTGCAACTAGCCAGGCTGACAGTGAACTaGGTTCAGCCTGCCTCTCAAGTGCTGAGAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: LAVLQLARLTVN*VQPASQVLRIK Trigger: CTTTATTCTCAGCACTTGAGAGGCAGGCTGAACTCAGTTCACTGTCAGCCTGGCTAGTTGCAGGACAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | AACCAGGCTGGTTTTGAACTCAGTGATCCATCCACCTaGTTCTGCCCCAGTCCTAGGGCTGGATGTATAAAT | + |
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Preference number: 3 (lower is better) Translates to: NQAGFELSDPST*FCPSPRAGCIN Trigger: ATTTATACATCCAGCCCTAGGACTGGGGCAGAATCAGGTGGATGGATCACTGAGTTCAAAACCAGCCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | ATGGGAACCAGAGATATGGTTACAATTAGGGTAGTCTaGCACACACACACACACATACACACACAACCGCCC | + |
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Preference number: 3 (lower is better) Translates to: MGTRDMVTIRVV*HTHTHIHTQPP Trigger: GGGCGGTTGTGTGTGTATGTGTGTGTGTGTGTGTCAGACTACCCTAATTGTAACCATATCTCTGGTTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| 3UTR GCA 72 bp | TGTAGCTCAATCAAGCTGGAAGTTCTGCCTCCCCGGTaGTGGGATTACCAAGGTTTTCAGTTCTACATACTA | + |
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Preference number: 3 (lower is better) Translates to: CSSIKLEVLPPR*WDYQGFQFYIL Trigger: TAGTATGTAGAACTGAAAACCTTGGTAATCCCAGCACCGGGGAGGCAGAACTTCCAGCTTGATTGAGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | GACAGGGTATTATATTACTATGTAGCTCAATCAAGCTaGAAGTTCTGCCTCCCCGGTGCTGGGATTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: DRVLYYYVAQSS*KFCLPGAGITK Trigger: CTTGGTAATCCCAGCACCGGGGAGGCAGAACTTCCAGCTTGATTGAGCTACATAGTAATATAATACCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | CAGACAGAACACAGTACCTCACTATATAGGCCTATCTaGCCTACAACCAGGCTGGTTTTGAACTCAGTGATC | + |
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Preference number: 3 (lower is better) Translates to: QTEHSTSLYRPI*PTTRLVLNSVI Trigger: GATCACTGAGTTCAAAACCAGCCTGGTTGTAGGCCAGATAGGCCTATATAGTGAGGTACTGTGTTCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR-3UTR CAA 90 bp | ATTGCAGATGTGCACCAGCATACTCAAAGCAGACAGAACACAGTACCTCACTATACAACCAGGCTGGTTTaGAACTCAGTGATCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: IADVHQHTQSRQNTVPHYTTRLV*NSVIHP Trigger: TGGATGGATCACTGAGTTCAAAACCAGCCTGGTTGT...ATAGTGAGGTACTGTGTTCTGTCTGCTTTGAGTATGCTGGTGCACATCTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | AGCTCAATCAAGCTGGAAGTTCTGCCTCCCCGGTGCTaGGATTACCAAGGTTTTCAGTTCTACATACTAATT | + |
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Preference number: 3 (lower is better) Translates to: SSIKLEVLPPRC*DYQGFQFYILI Trigger: AATTAGTATGTAGAACTGAAAACCTTGGTAATCCCAGCACCGGGGAGGCAGAACTTCCAGCTTGATTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | GTTACTCTAACTGCTCAGCCATCTCTCCCAAGTCCCTaGATTATTTTCAAGGACTCCTATAGCAGGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: VTLTAQPSLPSP*IIFKDSYSRHE Trigger: TTCATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTGAGCAGTTAGAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | TTATATTACTATGTAGCTCAATCAAGCTGGAAGTTCTaGCTCCCCGGTGCTGGGATTACCAAGGTTTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LYYYVAQSSWKF*LPGAGITKVFS Trigger: ACTGAAAACCTTGGTAATCCCAGCACCGGGGAGGCAGAACTTCCAGCTTGATTGAGCTACATAGTAATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | CTTCCTCTCATTTCCACACATAACCAATTGCAGATGTaGACCAGCATACTCAAAGCAGACAGAACACAGTAC | + |
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Preference number: 3 (lower is better) Translates to: LPLISTHNQLQM*TSILKADRTQY Trigger: GTACTGTGTTCTGTCTGCTTTGAGTATGCTGGTGCACATCTGCAATTGGTTATGTGTGGAAATGAGAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | CTAGGGGAACTACACTTCAGCACAAACTTTAACTTATaGCTTAGGATAGTAGTTGAGGGGAGAGGGACACAA | + |
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Preference number: 3 (lower is better) Translates to: LGELHFSTNFNL*LRIVVEGRGTQ Trigger: TTGTGTCCCTCTCCCCTCAACTACTATCCTAAGTCATAAGTTAAAGTTTGTGCTGAAGTGTAGTTCCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | CTTTGCCCAGGCAGTTTTAACTGTGACTGTTCTTTGTaGGTGTCACCTATAAAAAGCAAGTTCATGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: LCPGSFNCDCSL*VSPIKSKFMLE Trigger: CTCTAGCATGAACTTGCTTTTTATAGGTGACACTCACAAAGAACAGTCACAGTTAAAACTGCCTGGGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | AACATACACTTCCTCTCATTTCCACACATAACCAATTaGAGATGTGCACCAGCATACTCAAAGCAGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: NIHFLSFPHITN*RCAPAYSKQTE Trigger: TTCTGTCTGCTTTGAGTATGCTGGTGCACATCTGCAATTGGTTATGTGTGGAAATGAGAGGAAGTGTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | CTGTACAACAGAGTCCCTGTTCAAAATAAATCAATGTaGAGACATTGGGAACTCTTGTCTAGCAGTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: LYNRVPVQNKSM*RHWELLSSSDS Trigger: AGAATCACTGCTAGACAAGAGTTCCCAATGTCTGCACATTGATTTATTTTGAACAGGGACTCTGTTGTACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | AGAGTCCCTGTTCAAAATAAATCAATGTGCAGACATTaGGAACTCTTGTCTAGCAGTGATTCTCTAGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: RVPVQNKSMCRH*ELLSSSDSLGS Trigger: TGAACCTAGAGAATCACTGCTAGACAAGAGTTCCCAATGTCTGCACATTGATTTATTTTGAACAGGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | TGTTTCAGTTTACTGTTTGTGATACATTCTGAGACATaGTGCTTGCCCATTTCGGGAAAATTGTCTTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: CFSLLFVIHSET*CLPISGKLSFG Trigger: CCCAAAAGACAATTTTCCCGAAATGGGCAAGCATCATGTCTCAGAATGTATCACAAACAGTAAACTGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR TCA 72 bp | AACAGCATGTTTCAGTTTACTGTTTGTGATACATTCTaGGACATGATGCTTGCCCATTTCGGGAAAATTGTC | + |
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Preference number: 3 (lower is better) Translates to: NSMFQFTVCDTF*DMMLAHFGKIV Trigger: GACAATTTTCCCGAAATGGGCAAGCATCATGTCTCAGAATGTATCACAAACAGTAAACTGAAACATGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | GTCACCTATAAAAAGCAAGTTCATGCTAGAGAACTATaGAATTGGTTGGATGTGATGATACACCTCGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: VTYKKQVHAREL*NWLDVMIHLVF Trigger: AAAGACGAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTTTTTATAGGTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR GCA 72 bp | CACTTACTAGCTACAGGTCTCAATGTATGTAAGGTATaGTTCAGTTATCACCTTCTATACAAACGTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: HLLATGLNVCKV*FSYHLLYKRRN Trigger: ATTTCTACGTTTGTATAGAAGGTGATAACTGAAGCATACCTTACATACATTGAGACCTGTAGCTAGTAAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| 3UTR CCA 72 bp | TATAAAAAGCAAGTTCATGCTAGAGAACTATGCAATTaGTTGGATGTGATGATACACCTCGTCTTTAATCAG | + |
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Preference number: 3 (lower is better) Translates to: YKKQVHARELCN*LDVMIHLVFNQ Trigger: CTGATTAAAGACGAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTTTTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| CDS-3UTR GCA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATCACCTCCACCGCCCCTaGCTCGGCCCCCACGATCCT | + |
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Preference number: 4 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHHLHRP*LGPHDP Trigger: AGGATCGTGGGGGCCGAGGCAGGGGCGGTGGAGGTG...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCGCCCATGCCGCCTCTaGCTCCTCGGCCACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGARPCRL*LLGHLH Trigger: GTGGAGGTGGCCGAGGAGGCAGAGGCGGCATGGGCG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
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| CDS-3UTR CCA 90 bp | AAGAACTGTAGCCAGGAAGGGCACACACCTTTAATCCTAGCACCCAGGAGGCAGCACCTCCACGGCCTCTaGGTTCATAGCCACCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KNCSQEGHTPLILAPRRQHLHGL*VHSHHC Trigger: GCAGTGGTGGCTATGAACCCAGAGGCCGTGGAGGTG...CTGCCTCCTGGGTGCTAGGATTAAAGGTGTGTGCCCTTCCTGGCTACAGTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
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| CDS-3UTR GCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACACCTCCACCGCCCCTaGCTCGGCCCCCACGATCCT | + |
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Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPHLHRP*LGPHDP Trigger: AGGATCGTGGGGGCCGAGGCAGGGGCGGTGGAGGTG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
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| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGGTCACTTCCGCCCATaGCGCCTCTGCCTCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAGHFRP*RLCLLG Trigger: GCCGAGGAGGCAGAGGCGGCATGGGCGGAAGTGACC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
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| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGAGCCTCCACGGCCCATaGGTCCTCCTCGCCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQESLHGP*VLLALG Trigger: GCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
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| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCTCCACCACCTCCACTaGGGAATCCTCCCCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGALHHLH*GILPGH Trigger: GTGGCCGGGGAGGATTCCCCAGTGGAGGTGGTGGAG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
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| CDS-3UTR GCA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATCTGCGATCCTGTCTGTaGTCGCCCCTGGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHLRSCL*SPLESI Trigger: GATGGACTCCAGGGGCGAGCACAGACAGGATCGCAG...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCAGCCTCCACGGCCCATaGGTCCTCCTCGCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQVHARELCNWLDVMIHLSLHGP*VLLALG Trigger: GCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACTCCACCACCTCCACTaGGGAATCCTCCCCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPLHHLH*GILPGH Trigger: GTGGCCGGGGAGGATTCCCCAGTGGAGGTGGTGGAG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCTCCTGGTCCCCCTCCTaGGCCATCTGGCTTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGASWSPS*AIWLRC Trigger: GCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGA...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGTCTGTGCTCGCCCCTaGAGTCCATCTTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAVCARP*SPSCQG Trigger: GCCCTGGCAAGATGGACTCCAGGGGCGAGCACAGAC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCGGTCACTTCCGCCCATaGCGCCTCTGCCTCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQVHARELCNWLDVMIHLGHFRP*RLCLLG Trigger: GCCGAGGAGGCAGAGGCGGCATGGGCGGAAGTGACC...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCTGCGATCCTGTCTGTaGTCGCCCCTGGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGALRSCL*SPLESI Trigger: GATGGACTCCAGGGGCGAGCACAGACAGGATCGCAG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATCCTGGTCCCCCTCCTaGGCCATCTGGCTTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPSWSPS*AIWLRC Trigger: GCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGA...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCATGCACACCCTTCAAGTCTCTGCTACCCAACAAATGACTTTAAAGCAATCCTGGTCCCCCTCCTaGGCCATCTGGCTTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPMHTLQVSATQQMTLKQSWSPS*AIWLRC Trigger: GCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGA...TTGCTTTAAAGTCATTTGTTGGGTAGCAGAGACTTGAAGGGTGTGCATGGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCATATGAGAGCCTCCTaGTCCCCCTCCTGGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAHMRAS*SPSWAI Trigger: GATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGTCTGTGCTCGCCCCTaGAGTCCATCTTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPVCARP*SPSCQG Trigger: GCCCTGGCAAGATGGACTCCAGGGGCGAGCACAGAC...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | CATGGACCCATTCTTCAGAAAGTAAACTGGGGGAAACAGAATTTAACTAAAATGCGCCCATGCCGCCTCTaGCTCCTCGGCCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGPILQKVNWGKQNLTKMRPCRL*LLGHLH Trigger: GTGGAGGTGGCCGAGGAGGCAGAGGCGGCATGGGCG...CATTTTAGTTAAATTCTGTTTCCCCCAGTTTACTTTCTGAAGAATGGGTCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | CGTGTTACTGAACTACCCTACCCATGCACACCCTTCAAGTCTCTGCTACCCAACGCCATCTGGCTTAGGTaGCTTACACTGGTTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTELPYPCTPFKSLLPNAIWLR*LTLVAF Trigger: GAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGC...GTTGGGTAGCAGAGACTTGAAGGGTGTGCATGGGTAGGGTAGTTCAGTAACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACTGCGATCCTGTCTGTaGTCGCCCCTGGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPLRSCL*SPLESI Trigger: GATGGACTCCAGGGGCGAGCACAGACAGGATCGCAG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGGTGCTGCTAGGAGCTaGCTGTTGGCCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPGAARS*LLAIAR Trigger: CCTGGCTATGGCCAACAGCCAGCTCCTAGCAGCACC...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACACCTCCACGGCCTCTaGGTTCATAGCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPHLHGL*VHSHHC Trigger: GCAGTGGTGGCTATGAACCCAGAGGCCGTGGAGGTG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCCTCCTGGGCCATCTaGCTTAGGTGCCTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAPSWAI*LRCLTL Trigger: CAGTGTAAGGCACCTAAGCCAGATGGCCCAGGAGGG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGTCCTGGTCCCCCTCCTaGGCCATCTGGCTTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQESWSPS*AIWLRC Trigger: GCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGA...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACATATGAGAGCCTCCTaGTCCCCCTCCTGGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPHMRAS*SPSWAI Trigger: GATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGTCTGTGCTCGCCCCTaGAGTCCATCTTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEVCARP*SPSCQG Trigger: GCCCTGGCAAGATGGACTCCAGGGGCGAGCACAGAC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCTGCCATAGCCTCCAGTaGAACCATATCCCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGACHSLQ*NHIPGE Trigger: CTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCA...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGGTGCTGCTAGGAGCTaGCTGTTGGCCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEGAARS*LLAIAR Trigger: CCTGGCTATGGCCAACAGCCAGCTCCTAGCAGCACC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATATTGTGAACTTTGGCTaGTGCCATAGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHIVNFG*CHSLQW Trigger: CCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAAT...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGGGGTTGCCCATAGCTaGTGCTCTGAGAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEGVAHS*CSENCH Trigger: GTGGCAGTTCTCAGAGCAGCAGCTATGGGCAACCCC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS-3UTR GCA 90 bp | TTAAGAGCACTGACTCCTCTTCCAGAGGTCCTGAATTCAATTCCCAGCAACCACGCCATCTGGCTTAGGTaGCTTACACTGGTTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRALTPLPEVLNSIPSNHAIWLR*LTLVAF Trigger: GAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGC...GTGGTTGCTGGGAATTGAATTCAGGACCTCTGGAAGAGGAGTCAGTGCTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAAATATGGCCTCTCCCTaGGATCCTGTCTGTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPNMASP*DPVCAR Trigger: GCGAGCACAGACAGGATCGCAGGGAGAGGCCATATT...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS-3UTR CCA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTCATATGAGAGCCTCCTaGTCCCCCTCCTGGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFSGGTNQWSALVNIMKTHMRAS*SPSWAI Trigger: GATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATG...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR TCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATATCCCTGGGGAGCTaGCTGAGTTCCATAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAISLGS*LSSIAV Trigger: AACAGCTATGGAACTCAGTCAGCTCCCCAGGGATAT...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAATATCCCTGGGGAGCTaGCTGAGTTCCATAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPISLGS*LSSIAC Trigger: ACAGGCTATGGAACTCAGTCAGCTCCCCAGGGATAT...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATTGTGAACTTTGGCTaGTGCCATAGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAIVNFG*CHSLQW Trigger: CCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAAT...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTGGGGTTGCCCATAGCTaGTGCTCTGAGAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFSGGTNQWSALVNIMKTGVAHS*CSENCH Trigger: GTGGCAGTTCTCAGAGCAGCAGCTATGGGCAACCCC...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCTCCACCACCTCCACTaGTACTGTTGTACTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGALHHLH*YCCTGS Trigger: AGAACCAGTACAACAGTAGCAGTGGAGGTGGTGGAG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCTCACCCTTCAACTTaGCAGTTTCCCTGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAPHPST*QFPCLC Trigger: ACACAGACAGGGAAACTGGCAAGTTGAAGGGTGAGG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGCCATCTGGCTTAGGTaGCTTACACTGGTTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAAIWLR*LTLVAF Trigger: GAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGAATATGGCCTCTCCCTaGGATCCTGTCTGTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQENMASP*DPVCAR Trigger: GCGAGCACAGACAGGATCGCAGGGAGAGGCCATATT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGTGCCATAGCCTCCAGTaGAACCATATCCCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQECHSLQ*NHIPGE Trigger: CTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCA...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACTGTAGCCAGGAAGGGCACACACCTTTAATCCTAGCACCCAGGAGGCAGGGCCTTGCACGAAGATaGTATTGTTGTCTGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNCSQEGHTPLILAPRRQGLARR*YCCLNY Trigger: ATAATTCAGACAACAATACCATCTTCGTGCAAGGCC...CTGCCTCCTGGGTGCTAGGATTAAAGGTGTGTGCCCTTCCTGGCTACAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTCCCTCCTGGGCCATCTaGCTTAGGTGCCTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSGGTNQWSALVNIMKTPSWAI*LRCLTL Trigger: CAGTGTAAGGCACCTAAGCCAGATGGCCCAGGAGGG...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAAACAGCCTCAAAGACTGGGTTCTGAACTTTTCTTCTTCCTTCCCAAACCCTCCTGGGCCATCTaGCTTAGGTGCCTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KAKQPQRLGSELFFFLPKPSWAI*LRCLTL Trigger: CAGTGTAAGGCACCTAAGCCAGATGGCCCAGGAGGG...TTTGGGAAGGAAGAAGAAAAGTTCAGAACCCAGTCTTTGAGGCTGTTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGCCATCTGGCTTAGGTaGCTTACACTGGTTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPAIWLR*LTLVAF Trigger: GAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGC...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCAATATGGCCTCTCCCTaGGATCCTGTCTGTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KQVHARELCNWLDVMIHLNMASP*DPVCAR Trigger: GCGAGCACAGACAGGATCGCAGGGAGAGGCCATATT...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | CATGGACCCATTCTTCAGAAAGTAAACTGGGGGAAACAGAATTTAACTAAAATGGGTGCTGCTAGGAGCTaGCTGTTGGCCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGPILQKVNWGKQNLTKMGAARS*LLAIAR Trigger: CCTGGCTATGGCCAACAGCCAGCTCCTAGCAGCACC...CATTTTAGTTAAATTCTGTTTCCCCCAGTTTACTTTCTGAAGAATGGGTCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAAAGTTATGTTAGATTACGTGTTACTGAACTACCCTACCCATGCACACCATATGAGAGCCTCCTaGTCCCCCTCCTGGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KEKVMLDYVLLNYPTHAHHMRAS*SPSWAI Trigger: GATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATG...GTGTGCATGGGTAGGGTAGTTCAGTAACACGTAATCTAACATAACTTTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCCATAAGAAGATTGTaGACTTTGGCTGCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAPIRRL*TLAAAI Trigger: TATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR TCA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTATATCCCTGGGGAGCTaGCTGAGTTCCATAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFSGGTNQWSALVNIMKTISLGS*LSSIAC Trigger: ACAGGCTATGGAACTCAGTCAGCTCCCCAGGGATAT...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGATTGTGAACTTTGGCTaGTGCCATAGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEIVNFG*CHSLQW Trigger: CCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAAT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCTCCACCACCTCCACTaGTACTGTTGTACTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQELHHLH*YCCTGS Trigger: AGAACCAGTACAACAGTAGCAGTGGAGGTGGTGGAG...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGTTCATAGCCACCACTaGTTCGGTTGTAACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEVHSHH*FGCNHL Trigger: GAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAAC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACCCATAAGAAGATTGTaGACTTTGGCTGCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPPIRRL*TLAAAI Trigger: TATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGAAACCAGTCGATAGCTaGTTTAGCAGAAGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEKPVDS*FSRRWV Trigger: GACCCACCTTCTGCTAAAGCAGCTATCGACTGGTTT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGTTCATGCTAGAGAACTATGCAATTGGTTGGATGTGATGATACACCTCAAACCAGTCGATAGCTaGTTTAGCAGAAGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQVHARELCNWLDVMIHLKPVDS*FSRRWV Trigger: GACCCACCTTCTGCTAAAGCAGCTATCGACTGGTTT...GAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGGCCTTGCACGAAGATaGTATTGTTGTCTGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAGLARR*YCCLNY Trigger: ATAATTCAGACAACAATACCATCTTCGTGCAAGGCC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCTTAGGTGCCTTACACTaGTTGCATTCATTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QNNKGNTGYRKSSRTSGALGALH*LHSFLQ Trigger: TTGGAGAAATGAATGCAACCAGTGTAAGGCACCTAA...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATTAGGTGCCTTACACTaGTTGCATTCATTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KITRVTLGTGRVPELQEPLGALH*LHSFLQ Trigger: TTGGAGAAATGAATGCAACCAGTGTAAGGCACCTAA...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR GCA 90 bp | AATTGGTTGGATGTGATGATACACCTCGTCTTTAATCAGAGAAAAATGAGACTTGTTCATAGCCACCACTaGTTCGGTTGTAACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NWLDVMIHLVFNQRKMRLVHSHH*FGCNHL Trigger: GAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAAC...AAGTCTCATTTTTCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR GCA 90 bp | AATTGGTTGGATGTGATGATACACCTCGTCTTTAATCAGAGAAAAATGAGACTTCCTCACCCTTCAACTTaGCAGTTTCCCTGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWLDVMIHLVFNQRKMRLPHPST*QFPCLC Trigger: ACACAGACAGGGAAACTGGCAAGTTGAAGGGTGAGG...AAGTCTCATTTTTCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGTTAGGTGCCTTACACTaGTTGCATTCATTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQELGALH*LHSFLQ Trigger: TTGGAGAAATGAATGCAACCAGTGTAAGGCACCTAA...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR TCA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGATGGTATTGTTGTCTaGATTATCCTGTTCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: YKITRVTLGTGRVPELQEDGIVV*IILFRI Trigger: GATTCTGAACAGGATAATTCAGACAACAATACCATC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| 3UTR CAA 72 bp | GTTCAAAATAAATCAATGTGCAGACATTGGGAACTCTaGTCTAGCAGTGATTCTCTAGGTTCAATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNKSMCRHWEL*SSSDSLGSIHR Trigger: CCTGTGGATTGAACCTAGAGAATCACTGCTAGACAAGAGTTCCCAATGTCTGCACATTGATTTATTTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR TCA 90 bp | CTATACAAACGTAGAAATTCTCTACAAATCAGGCCAACATGGTGCCTGTCTATAGATGGTATTGTTGTCTaGATTATCCTGTTCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LYKRRNSLQIRPTWCLSIDGIVV*IILFRI Trigger: GATTCTGAACAGGATAATTCAGACAACAATACCATC...TATAGACAGGCACCATGTTGGCCTGATTTGTAGAGAATTTCTACGTTTGTATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| 3UTR CAA 72 bp | AAAAAGCAAGTTCATGCTAGAGAACTATGCAATTGGTaGGATGTGATGATACACCTCGTCTTTAATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKQVHARELCNW*DVMIHLVFNQR Trigger: TCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATTGCATAGTTCTCTAGCATGAACTTGCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGTAGCCAGGAAGGGCACACACCTTTAATCCTAGCACCCAGGAGGCAGGCTAGGAGCTGGCTGTaGGCCATAGCCAGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KNCSQEGHTPLILAPRRQARSWL*AIARVG Trigger: TCCTACCCTGGCTATGGCCAACAGCCAGCTCCTAGC...CTGCCTCCTGGGTGCTAGGATTAAAGGTGTGTGCCCTTCCTGGCTACAGTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGGCTAATATGGCCTCCAGTCTCCAGCTCGTaGCTGTCCTCCACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NTGYRKSSRTSGARLIWPPVSSS*LSSTST Trigger: GGTGGAGGTGGAGGACAGCAACGAGCTGGAGACTGG...AGGCCATATTAGCCTGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS TCA 90 bp | TTGGCCATAGCCAGGGTAGGAGGACTGCTGCCCATAAGAAGATTGTaGACTTTGGCTGCTGCCATAGCCTCCAGTGGAACCATATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAIARVGGLLPIRRL*TLAAAIASSGTISL Trigger: CAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGCAGCAGTCCTCCTACCCTGGCTATGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGCCAGTCTCCAGCTCGTaGCTGTCCTCCACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMPVSSS*LSSTST Trigger: GGTGGAGGTGGAGGACAGCAACGAGCTGGAGACTGG...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCCCTGGAGTCCATCTaGCCAGGGCCAAAACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAPLESI*PGPKPP Trigger: AGGCGGTTTTGGCCCTGGCAAGATGGACTCCAGGGG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS TCA 90 bp | TTGGCTGCTGCCATAGCCTCCAGTGGAACCATATCCCTGGGGAGCTaGCTGAGTTCCATAGCTGTTTTGGGTCTGTCCATAAGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LAAAIASSGTISLGS*LSSIAVLGLSIRRT Trigger: GGTTCTTCTTATGGACAGACCCAAAACAGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS TCA 90 bp | TTGGCTGCTGCCATAGCCTCCAGTGGAACCATATCCCTGGGGAGCTaGCTGAGTTCCATAGCCTGTGTTTTGGGTCTGTCCATAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAAAIASSGTISLGS*LSSIACVLGLSIRR Trigger: TCTTCTTATGGACAGACCCAAAACACAGGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CCA 90 bp | GCCCATAAGAAGATTGTGAACTTTGGCTGCTGCCATAGCCTCCAGTaGAACCATATCCCTGGGGAGCTGACTGAGTTCCATAGCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHKKIVNFGCCHSLQ*NHIPGELTEFHSLC Trigger: ACACAGGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGCTAGGAGCTGGCTGTaGGCCATAGCCAGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAARSWL*AIARVG Trigger: TCCTACCCTGGCTATGGCCAACAGCCAGCTCCTAGC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACCAGTCTCCAGCTCGTaGCTGTCCTCCACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPPVSSS*LSSTST Trigger: GGTGGAGGTGGAGGACAGCAACGAGCTGGAGACTGG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGTCTCCAGCTCGTaGCTGTCCTCCACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEPVSSS*LSSTST Trigger: GGTGGAGGTGGAGGACAGCAACGAGCTGGAGACTGG...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 ENSMUST00000141997.2 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCTGGAGTCCATCTaGCCAGGGCCAAAACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEPLESI*PGPKPP Trigger: AGGCGGTTTTGGCCCTGGCAAGATGGACTCCAGGGG...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS GCA 90 bp | GAGTTCCATAGCTGTTTTGGGTCTGTCCATAAGAAGAACCATAGCTaGTCTGGCCGTATCCTGAAGTGTCAGCTGACTGGCCATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: EFHSCFGSVHKKNHS*SGRILKCQLTGHNH Trigger: GTGGTTATGGCCAGTCAGCTGACACTTCAGGATACGGCCAGAGCAGCTATGGTTCTTCTTATGGACAGACCCAAAACAGCTATGGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS GCA 90 bp | TTCCATAGCCTGTGTTTTGGGTCTGTCCATAAGAAGAACCATAGCTaGTCTGGCCGTATCCTGAAGTGTCAGCTGACTGGCCATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FHSLCFGSVHKKNHS*SGRILKCQLTGHNH Trigger: GTGGTTATGGCCAGTCAGCTGACACTTCAGGATACGGCCAGAGCAGCTATGGTTCTTCTTATGGACAGACCCAAAACACAGGCTATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CCA 90 bp | GCCCATAAGAAGATTGTGAACTTTGGCTGCTGCCATAGCCTCCAGTaGAACCATATCCCTGGGGAGCTGACTGAGTTCCATAGCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHKKIVNFGCCHSLQ*NHIPGELTEFHSCF Trigger: AAAACAGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGACCTCCACTCTGGGGTaGCCCATAGCTGCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQETSTLG*PIAAAL Trigger: CAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGCCTCACCCTTCAACTaGCCAGTTTCCCTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAASPFN*PVSLSV Trigger: CACAGACAGGGAAACTGGCAAGTTGAAGGGTGAGGC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATTTCCACCACCCCGATaGAAGTCAGCTCGGCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPFPPPR*KSARRV Trigger: TACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAA...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACCACTGTAACTCTGTaGGCCATAGGGCTGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGATTVTL*AIGLTA Trigger: AGCAGTCAGCCCTATGGCCAACAGAGTTACAGTGGT...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCATCTCTCCCAAGTCCCTGGATTATTTTCAAGGACTCCTATAGCAGGCATCCTCCACTGCTACTGTaGTACTGGTTCTGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPSLPSPWIIFKDSYSRHPPLLL*YWFCCP Trigger: TGGACAACAGAACCAGTACAACAGTAGCAGTGGAGG...ATGCCTGCTATAGGAGTCCTTGAAAATAATCCAGGGACTTGGGAGAGATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGTTTCCACCACCCCGATaGAAGTCAGCTCGGCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEFPPPR*KSARRV Trigger: TACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAA...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCGCCCCTGAAAGAAAAAGTTATGTTAGATTACGTGTTACTGAACTACCACCTGGAGTCCATCTaGCCAGGGCCAAAACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCSPLKEKVMLDYVLLNYHLESI*PGPKPP Trigger: AGGCGGTTTTGGCCCTGGCAAGATGGACTCCAGGTG...GTAGTTCAGTAACACGTAATCTAACATAACTTTTTCTTTCAGGGGCGAGCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141997.2 |
||
| CDS CCA 90 bp | TCCACTGCTACTGTTGTACTGGTTCTGTTGTCCATAACCCTGAGGTaGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTTGTTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: STATVVLVLLSITLR*VIGALLLSVALLLS Trigger: GGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTACAACAGTAGCAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAACCACTGTAACTCTGTaGGCCATAGGGCTGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPTTVTL*AIGLTA Trigger: AGCAGTCAGCCCTATGGCCAACAGAGTTACAGTGGT...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | CTATACAAACGTAGAAATTCTCTACAAATCAGGCCAACATGGTGCCTGTCTATAACCTCCACTCTGGGGTaGCCCATAGCTGCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LYKRRNSLQIRPTWCLSITSTLG*PIAAAL Trigger: CAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGT...TATAGACAGGCACCATGTTGGCCTGATTTGTAGAGAATTTCTACGTTTGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCTTGTCCGTAGCTTTGTaGCTGTCCACCATAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGALSVAL*LSTIAR Trigger: TCTGGCTATGGTGGACAGCAACAAAGCTACGGACAA...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGGTTGTACTGGTTCTGTaGTCCATAACCCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMVVLVL*SITLRW Trigger: CCACCTCAGGGTTATGGACAACAGAACCAGTACAAC...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCCCTCCACTGCTACTGTaGTACTGGTTCTGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAPPLLL*YWFCCP Trigger: TGGACAACAGAACCAGTACAACAGTAGCAGTGGAGG...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGCCTCACCCTTCAACTaGCCAGTTTCCCTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEASPFN*PVSLSV Trigger: CACAGACAGGGAAACTGGCAAGTTGAAGGGTGAGGC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS TCA 90 bp | CTGTCCTCCACCACCCCGATTGAAGTCAGCTCGGCGGGTAGCAAATaGAACTTTAATAGGATTCCCAGAGAATTCTTTACCATCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSTTPIEVSSAGSK*NFNRIPREFFTIKP Trigger: TGGTTTGATGGTAAAGAATTCTCTGGGAATCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174632.8 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGACCACTGTAACTCTGTaGGCCATAGGGCTGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQETTVTL*AIGLTA Trigger: AGCAGTCAGCCCTATGGCCAACAGAGTTACAGTGGT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATTGTCCGTAGCTTTGTaGCTGTCCACCATAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPLSVAL*LSTIAR Trigger: TCTGGCTATGGTGGACAGCAACAAAGCTACGGACAA...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCATTGTTGTCCGTAGCTTaGTTGCTGTCCACCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPLLSVA*LLSTIA Trigger: GGCTATGGTGGACAGCAACAAAGCTACGGACAACAA...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGAGCACTGACTCCTCTTCCAGAGGTCCTGAATTCAATTCCCAGCAACCACATAGGAGCTTTGTTGTaGTCCGTAGCTTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRALTPLPEVLNSIPSNHIGALL*SVALLL Trigger: CAGCAACAAAGCTACGGACAACAACAAAGCTCCTAT...GTGGTTGCTGGGAATTGAATTCAGGACCTCTGGAAGAGGAGTCAGTGCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAGTTGTACTGGTTCTGTaGTCCATAACCCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPVVLVL*SITLRW Trigger: CCACCTCAGGGTTATGGACAACAGAACCAGTACAAC...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACCTCCACTGCTACTGTaGTACTGGTTCTGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPPPLLL*YWFCCP Trigger: TGGACAACAGAACCAGTACAACAGTAGCAGTGGAGG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGTTGTTGTCCGTAGCTTaGTTGCTGTCCACCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQELLSVA*LLSTIA Trigger: GGCTATGGTGGACAGCAACAAAGCTACGGACAACAA...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGGTTGTACTGGTTCTGTaGTCCATAACCCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEVVLVL*SITLRW Trigger: CCACCTCAGGGTTATGGACAACAGAACCAGTACAAC...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS TCA 90 bp | ACCATTTCCACCACCCCGATTGAAGTCAGCTCGGCGGGTAGCAAATaGAACTTTAATAGGATTCCCAGAGAATTCTTTACCATCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TISTTPIEVSSAGSK*NFNRIPREFFTIKP Trigger: TGGTTTGATGGTAAAGAATTCTCTGGGAATCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCAATAGGAGCTTTGTTGTaGTCCGTAGCTTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPIGALL*SVALLL Trigger: CAGCAACAAAGCTACGGACAACAACAAAGCTCCTAT...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACATCAAATGAAACTGTaGCCTCACCCTTCAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KITRVTLGTGRVPELQEPHQMKL*PHPSTC Trigger: GCAAGTTGAAGGGTGAGGCAACAGTTTCATTTGATG...TGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CTATACAAACGTAGAAATTCTCTACAAATCAGGCCAACATGGTGCCTGTCTATATTGTCCGTAGCTTTGTaGCTGTCCACCATAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYKRRNSLQIRPTWCLSILSVAL*LSTIAR Trigger: TCTGGCTATGGTGGACAGCAACAAAGCTACGGACAA...TATAGACAGGCACCATGTTGGCCTGATTTGTAGAGAATTTCTACGTTTGTATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | TACAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGATAGGAGCTTTGTTGTaGTCCGTAGCTTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YKITRVTLGTGRVPELQEIGALL*SVALLL Trigger: CAGCAACAAAGCTACGGACAACAACAAAGCTCCTAT...CTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCACGAAGATGGTATTGTaGTCTGAATTATCCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGATKMVL*SELSCS Trigger: TGAACAGGATAATTCAGACAACAATACCATCTTCGT...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATAACAAGGGTAACACTGGGTACAGGAAGAGTTCCAGAACTTCAGGAGCCGGCTGTCCAGTTTTCTaGTTTGTCTTAATAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNNKGNTGYRKSSRTSGAGCPVF*FVLIIP Trigger: TGGAATTATTAAGACAAACAAGAAAACTGGACAGCC...GGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | GGGACACAACTCAGCAGCAAGAAACCACTTACTAGCTACAGGTCTCAATGTATGGGCTGTCCAGTTTTCTaGTTTGTCTTAATAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTQLSSKKPLTSYRSQCMGCPVF*FVLIIP Trigger: TGGAATTATTAAGACAAACAAGAAAACTGGACAGCC...CATACATTGAGACCTGTAGCTAGTAAGTGGTTTCTTGCTGCTGAGTTGTGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | ACCTTCAGTGGAGGTACAAATCAATGGTCAGCTCTTGTCAACATTATGAAGACTACGAAGATGGTATTGTaGTCTGAATTATCCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFSGGTNQWSALVNIMKTTKMVL*SELSCS Trigger: TGAACAGGATAATTCAGACAACAATACCATCTTCGT...AGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCACTGAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS-3UTR CAA 90 bp | AATTGGTTGGATGTGATGATACACCTCGTCTTTAATCAGAGAAAAATGAGACTTCATCAAATGAAACTGTaGCCTCACCCTTCAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NWLDVMIHLVFNQRKMRLHQMKL*PHPSTC Trigger: GCAAGTTGAAGGGTGAGGCAACAGTTTCATTTGATG...AAGTCTCATTTTTCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106251.10 |
||
| CDS GCA 72 bp | GGCCACCTCCACGGCCTCTGGGTTCATAGCCACCACTaGTTCGGTTGTAACCACCTCCACCGCCCCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GHLHGLWVHSHH*FGCNHLHRPCL Trigger: GAGGCAGGGGCGGTGGAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAACCCAGAGGCCGTGGAGGTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS CAA 72 bp | ACCACCGCCACCGCCACCACTCATAGAGGACTGATCTaGGCCATAGTTGCCTCCACCACCCCCTCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: TTATATTHRGLI*AIVASTTPSTT Trigger: GGTGGTGGAGGGGGTGGTGGAGGCAACTATGGCCAAGATCAGTCCTCTATGAGTGGTGGCGGTGGCGGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS CAA 72 bp | CGCCCTCGGCCTCCGCGACCATTTCCACCACCCCGATaGAAGTCAGCTCGGCGGGTAGCAAATGAAACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RPRPPRPFPPPR*KSARRVANETL Trigger: TAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAATGGTCGCGGAGGCCGAGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS CAA 90 bp | GGTCCTCCTCGCCCTCGGCCTCCGCGACCATTTCCACCACCCCGATaGAAGTCAGCTCGGCGGGTAGCAAATGAAACTTTAATAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: GPPRPRPPRPFPPPR*KSARRVANETLIGF Trigger: GAATCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAATGGTCGCGGAGGCCGAGGGCGAGGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 |
||
| CDS TCA 72 bp | GCCATAGCCTCCAGTGGAACCATATCCCTGGGGAGCTaGCTGAGTTCCATAGCCTGTGTTTTGGGTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AIASSGTISLGS*LSSIACVLGLS Trigger: GGACAGACCCAAAACACAGGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS GCA 72 bp | GACCATAACCTCCACTCTGGGGTTGCCCATAGCTGCTaGTCTGAGAACTGCCACCATAACTTCCTGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DHNLHSGVAHSC*SENCHHNFLRC Trigger: GCACCTCAGGAAGTTATGGTGGCAGTTCTCAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGTTATGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS GCA 72 bp | GTTGACCATAACCTCCACTCTGGGGTTGCCCATAGCTaGTGCTCTGAGAACTGCCACCATAACTTCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VDHNLHSGVAHS*CSENCHHNFLR Trigger: CCTCAGGAAGTTATGGTGGCAGTTCTCAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGTTATGGTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS TCA 72 bp | GCCATAGCCTCCAGTGGAACCATATCCCTGGGGAGCTaGCTGAGTTCCATAGCTGTTTTGGGTCTGTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: AIASSGTISLGS*LSSIAVLGLSI Trigger: TATGGACAGACCCAAAACAGCTATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS GCA 72 bp | ACTGCTGCCCATAAGAAGATTGTGAACTTTGGCTGCTaGCATAGCCTCCAGTGGAACCATATCCCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAAHKKIVNFGC*HSLQWNHIPGE Trigger: CTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS GCA 72 bp | AGGACTGCTGCCCATAAGAAGATTGTGAACTTTGGCTaGTGCCATAGCCTCCAGTGGAACCATATCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTAAHKKIVNFG*CHSLQWNHIPG Trigger: CCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGCAGCAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 72 bp | ATAGCCAGACTGTTGACCATAACCTCCACTCTGGGGTaGCCCATAGCTGCTGCTCTGAGAACTGCCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: IARLLTITSTLG*PIAAALRTATI Trigger: TATGGTGGCAGTTCTCAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGTTATGGTCAACAGTCTGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 72 bp | TCCGTAGCTTTGTTGCTGTCCACCATAGCCAGACTGTaGACCATAACCTCCACTCTGGGGTTGCCCATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVALLLSTIARL*TITSTLGLPIA Trigger: AGCTATGGGCAACCCCAGAGTGGAGGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | TTGTTGTTGTCCGTAGCTTTGTTGCTGTCCACCATAGCCAGACTGTaGACCATAACCTCCACTCTGGGGTTGCCCATAGCTGCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSVALLLSTIARL*TITSTLGLPIAAAL Trigger: CAGAGCAGCAGCTATGGGCAACCCCAGAGTGGAGGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | TCCTCCACCTCCACCACCTCCACTGCTACTGTTGTACTGGTTCTGTaGTCCATAACCCTGAGGTGGGTTATAGGAGCTTTGTTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTSTTSTATVVLVL*SITLRWVIGALLLS Trigger: GGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTACAACAGTAGCAGTGGAGGTGGTGGAGGTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121616.9 |
||
| CDS GCA 72 bp | AGCTGTTTTGGGTCTGTCCATAAGAAGAACCATAGCTaGTCTGGCCGTATCCTGAAGTGTCAGCTGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCFGSVHKKNHS*SGRILKCQLTG Trigger: GCCAGTCAGCTGACACTTCAGGATACGGCCAGAGCAGCTATGGTTCTTCTTATGGACAGACCCAAAACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077609.12 |
||
| CDS GCA 72 bp | CTGTGTTTTGGGTCTGTCCATAAGAAGAACCATAGCTaGTCTGGCCGTATCCTGAAGTGTCAGCTGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCFGSVHKKNHS*SGRILKCQLTG Trigger: GCCAGTCAGCTGACACTTCAGGATACGGCCAGAGCAGCTATGGTTCTTCTTATGGACAGACCCAAAACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CCA 72 bp | AAGATTGTGAACTTTGGCTGCTGCCATAGCCTCCAGTaGAACCATATCCCTGGGGAGCTGACTGAGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KIVNFGCCHSLQ*NHIPGELTEFH Trigger: ATGGAACTCAGTCAGCTCCCCAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | ACCCTGAGGTGGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTTGTaGCTGTCCACCATAGCCAGACTGTTGACCATAACCTCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRWVIGALLLSVAL*LSTIARLLTITSTL Trigger: CAGAGTGGAGGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 72 bp | TCCACCACCTCCACTGCTACTGTTGTACTGGTTCTGTaGTCCATAACCCTGAGGTGGGTTATAGGAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: STTSTATVVLVL*SITLRWVIGAL Trigger: CAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTACAACAGTAGCAGTGGAGGTGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | GTTCTGTTGTCCATAACCCTGAGGTGGGTTATAGGAGCTTTGTTGTaGTCCGTAGCTTTGTTGCTGTCCACCATAGCCAGACTGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: VLLSITLRWVIGALL*SVALLLSTIARLLT Trigger: GGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | CTGGTTCTGTTGTCCATAACCCTGAGGTGGGTTATAGGAGCTTTGTaGTTGTCCGTAGCTTTGTTGCTGTCCACCATAGCCAGACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLLSITLRWVIGAL*LSVALLLSTIARLL Trigger: CAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
||
| CDS CAA 90 bp | GTACTGGTTCTGTTGTCCATAACCCTGAGGTGGGTTATAGGAGCTTaGTTGTTGTCCGTAGCTTTGTTGCTGTCCACCATAGCCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: VLVLLSITLRWVIGA*LLSVALLLSTIARL Trigger: CAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 72 bp | TCCATAACCCTGAGGTGGGTTATAGGAGCTTTGTTGTaGTCCGTAGCTTTGTTGCTGTCCACCATAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SITLRWVIGALL*SVALLLSTIAR Trigger: TCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 72 bp | TTGTCCATAACCCTGAGGTGGGTTATAGGAGCTTTGTaGTTGTCCGTAGCTTTGTTGCTGTCCACCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSITLRWVIGAL*LSVALLLSTIA Trigger: GGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 90 bp | ATAACCCTGAGGTGGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTaGTTGCTGTCCACCATAGCCAGACTGTTGACCATAACCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ITLRWVIGALLLSVA*LLSTIARLLTITST Trigger: AGTGGAGGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 72 bp | TGGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTTGTaGCTGTCCACCATAGCCAGACTGTTGACCATAACC | + |
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Preference number: 6 (lower is better) Translates to: WVIGALLLSVAL*LSTIARLLTIT Trigger: GGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 72 bp | AGGTGGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTaGTTGCTGTCCACCATAGCCAGACTGTTGACCATA | + |
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Preference number: 6 (lower is better) Translates to: RWVIGALLLSVA*LLSTIARLLTI Trigger: TATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS CAA 72 bp | CTGTTGTCCATAACCCTGAGGTGGGTTATAGGAGCTTaGTTGTTGTCCGTAGCTTTGTTGCTGTCCACCATA | + |
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Preference number: 6 (lower is better) Translates to: LLSITLRWVIGA*LLSVALLLSTI Trigger: TATGGTGGACAGCAACAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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| CDS TCA 72 bp | ACCACCCCGATTGAAGTCAGCTCGGCGGGTAGCAAATaGAACTTTAATAGGATTCCCAGAGAATTCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: TTPIEVSSAGSK*NFNRIPREFFT Trigger: GGTAAAGAATTCTCTGGGAATCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000174632.8 |
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| CDS CCA 72 bp | ACTGTTGTACTGGTTCTGTTGTCCATAACCCTGAGGTaGGTTATAGGAGCTTTGTTGTTGTCCGTAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TVVLVLLSITLR*VIGALLLSVAL Trigger: CAAAGCTACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTACAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077609.12 ENSMUST00000106251.10 ENSMUST00000121616.9 |
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