Pregenerated sensors for FUNDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031198Ensembl transcript IDs: ENSMUST00000033541.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCTTAAGGGACTGGAGAGATGCTCAGCAGTTAAGAGCACTGGTTaGTCTTCAAGTGGTCCTAAGTCCAATTCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: LLKGLERCSAVKSTG*SSSGPKSNSQQPHG Trigger: ACCATGTGGTTGCTGGGAATTGGACTTAGGACCACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATCTCTCCAGTCCCTTAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR GCA 90 bp | GCCTGGAACATCTCTTTAAAATTTTTGCTTAAGGGACTGGAGAGATaGTCAGCAGTTAAGAGCACTGGTTGCTCTTCAAGTGGTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: AWNISLKFLLKGLER*SAVKSTGCSSSGPK Trigger: CTTAGGACCACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATCTCTCCAGTCCCTTAAGCAAAAATTTTAAAGAGATGTTCCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR CCA 90 bp | AAGACACAGGGAGAACAACATGGCTACATCAAGAATCACCATAAATaGCACAACCCCAAGAAGAATACAAAGAACTATAAAACAGATGAT | + |
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Preference number: 1 (lower is better) Translates to: KTQGEQHGYIKNHHK*HNPKKNTKNYKTDD Trigger: ATCATCTGTTTTATAGTTCTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATGTTGTTCTCCCTGTGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACAGGCACAGGAGAAGATaGGGAAGAGGAGTGCCGATT | + |
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Preference number: 2 (lower is better) Translates to: FALTMPMILKTQGEQHGYRHRRR*GRGVPI Trigger: AATCGGCACTCCTCTTCCTCATCTTCTCCTGTGCCT...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGAAAGCAGATGGATCAGAAGTCAGCTACCAACCCACTAGAGAGATACTAGGCCTGAGAAGACCTTaGACCAGGAGAAGCCTATTA | + |
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Preference number: 2 (lower is better) Translates to: RKKADGSEVSYQPTREILGLRRP*TRRSLL Trigger: TAATAGGCTTCTCCTGGTGCAAGGTCTTCTCAGGCC...TAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTTTCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR CAA 90 bp | AAGGCACAGGAGAAGATGAGGAAGAGGAGTGCCGATTGTCCTATGTaGGAGTGTAGAAGCTGCTGGCAAGAAACAAACAACTATAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KAQEKMRKRSADCPM*ECRSCWQETNNYKN Trigger: ATTTTTATAGTTGTTTGTTTCTTGCCAGCAGCTTCTACACTCCAACATAGGACAATCGGCACTCCTCTTCCTCATCTTCTCCTGTGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAAAGCAGATGGATCAGAAGTCAGCTACCAACCCACTAGAGAGATACTATCCAACGTGTTAAATTaGGAAGGCCTGAGAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: RKKADGSEVSYQPTREILSNVLN*EGLRRP Trigger: AGGTCTTCTCAGGCCTTCTCAATTTAACACGTTGGA...TAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTTTCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACTTGGAGTGTAGAAGCTaGTGGCAAGAAACAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: FALTMPMILKTQGEQHGYLECRS*WQETNN Trigger: GTTGTTTGTTTCTTGCCAGCAGCTTCTACACTCCAA...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CCA 90 bp | GATGCTCAGCAGTTAAGAGCACTGGTTGCTCTTCAAGTGGTCCTAAGTCCAATTGAGTGTAGAAGCTGCTaGCAAGAAACAAACAACTAT | + |
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Preference number: 2 (lower is better) Translates to: DAQQLRALVALQVVLSPIECRSC*QETNNY Trigger: ATAGTTGTTTGTTTCTTGCCAGCAGCTTCTACACTC...AATTGGACTTAGGACCACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CCA 90 bp | GATGCTCAGCAGTTAAGAGCACTGGTTGCTCTTCAAGTGGTCCTAAGTCCAATTATCTGTAATGGGATTTaGCACAGAGTTGAACATGCA | + |
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Preference number: 2 (lower is better) Translates to: DAQQLRALVALQVVLSPIICNGI*HRVEHA Trigger: TGCATGTTCAACTCTGTGCCAAATCCCATTACAGAT...AATTGGACTTAGGACCACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAAAGCAGATGGATCAGAAGTCAGCTACCAACCCACTAGAGAGATACTATTTTGCTTAAGGGACTaGAGAGATGCTCAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RKKADGSEVSYQPTREILFCLRD*RDAQQL Trigger: TAACTGCTGAGCATCTCTCCAGTCCCTTAAGCAAAA...TAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTTTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAAAGCAGATGGATCAGAAGTCAGCTACCAACCCACTAGAGAGATACTACAAGCAATGGATACTTaGGGAAATCACTGTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: RKKADGSEVSYQPTREILQAMDT*GNHCTL Trigger: GAGAGTACAGTGATTTCCCCAAGTATCCATTGCTTG...TAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTTTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR TCA 90 bp | CATGGCTACATCAAGAATCACCATAAATGGCACAACCCCAAGAAGAATACAAAGATGCTATTCTTATTCTaGATGCCTGGAACATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HGYIKNHHKWHNPKKNTKMLFLF*MPGTSL Trigger: AAGAGATGTTCCAGGCATTCAGAATAAGAATAGCAT...CTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR GCA 72 bp | GGACTGGAGAGATGCTCAGCAGTTAAGAGCACTGGTTaGTCTTCAAGTGGTCCTAAGTCCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLERCSAVKSTG*SSSGPKSNSQQ Trigger: TTGCTGGGAATTGGACTTAGGACCACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATCTCTCCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGAAAGCAGATGGATCAGAAGTCAGCTACCAACCCACTAGAGAGATACTAGCCGATTGTCCTATGTaGGAGTGTAGAAGCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RKKADGSEVSYQPTREILADCPM*ECRSCW Trigger: CCAGCAGCTTCTACACTCCAACATAGGACAATCGGC...TAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTTTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACTTCCAACGTGTTAAATaGAGAAGGCCTGAGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: FALTMPMILKTQGEQHGYFQRVK*RRPEKT Trigger: GGTCTTCTCAGGCCTTCTCAATTTAACACGTTGGAA...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACGGAAAAGGAACATTCTaGTTAAGCTACACACCAACC | + |
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Preference number: 3 (lower is better) Translates to: FALTMPMILKTQGEQHGYGKGTF*LSYTPT Trigger: GGTTGGTGTGTAGCTTAACAAGAATGTTCCTTTTCC...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR-3UTR CAA 90 bp | CATGGCTACATCAAGAATCACCATAAATGGCACAACCCCAAGAAGAATACAAAGGCAAGCAATGGATACTaGGGGAAATCACTGTACTCT | + |
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Preference number: 3 (lower is better) Translates to: HGYIKNHHKWHNPKKNTKASNGY*GKSLYS Trigger: AGAGTACAGTGATTTCCCCAAGTATCCATTGCTTGC...CTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR GCA 72 bp | ATCTCTTTAAAATTTTTGCTTAAGGGACTGGAGAGATaGTCAGCAGTTAAGAGCACTGGTTGCTCTTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: ISLKFLLKGLER*SAVKSTGCSSS Trigger: ACTTGAAGAGCAACCAGTGCTCTTAACTGCTGAGCATCTCTCCAGTCCCTTAAGCAAAAATTTTAAAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR CCA 72 bp | CAATTACATGATTGCTATAGGCAAGCAATGGATACTTaGGGAAATCACTGTACTCTCTTTATGTTTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: QLHDCYRQAMDT*GNHCTLFMFPQ Trigger: CTGTGGAAACATAAAGAGAGTACAGTGATTTCCCCAAGTATCCATTGCTTGCCTATAGCAATCATGTAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR CCA 72 bp | GGAGAACAACATGGCTACATCAAGAATCACCATAAATaGCACAACCCCAAGAAGAATACAAAGAACTATAAA | + |
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Preference number: 3 (lower is better) Translates to: GEQHGYIKNHHK*HNPKKNTKNYK Trigger: TTTATAGTTCTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATGTTGTTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| 3UTR CAA 72 bp | GAGAAGATGAGGAAGAGGAGTGCCGATTGTCCTATGTaGGAGTGTAGAAGCTGCTGGCAAGAAACAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: EKMRKRSADCPM*ECRSCWQETNN Trigger: GTTGTTTGTTTCTTGCCAGCAGCTTCTACACTCCAACATAGGACAATCGGCACTCCTCTTCCTCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| CDS-3UTR TCA 90 bp | CATGGCTACATCAAGAATCACCATAAATGGCACAACCCCAAGAAGAATACAAAGGTATGGTTTGCCAGCTaGAGGAGAAAGAATCCACCT | + |
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Preference number: 4 (lower is better) Translates to: HGYIKNHHKWHNPKKNTKVWFAS*RRKNPP Trigger: AGGTGGATTCTTTCTCCTTCAGCTGGCAAACCATAC...CTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| CDS-3UTR GCA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACAATTACCAGCTGGGTTaGTACACTATATTTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FALTMPMILKTQGEQHGYNYQLG*YTIFFS Trigger: GCTGAAAAATATAGTGTAGCAACCCAGCTGGTAATT...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| CDS-3UTR GCA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACTTCTGCAAGATCCAGTaGTTCAAATTTTCCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: FALTMPMILKTQGEQHGYFCKIQ*FKFSIK Trigger: TTTGATGGAAAATTTGAAGCACTGGATCTTGCAGAA...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| CDS-3UTR CCA 90 bp | CATGGCTACATCAAGAATCACCATAAATGGCACAACCCCAAGAAGAATACAAAGGCTCTTGACCTCAGTTaGTATTTGCTTATTCTTACG | + |
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Preference number: 4 (lower is better) Translates to: HGYIKNHHKWHNPKKNTKALDLS*YLLILT Trigger: CGTAAGAATAAGCAAATACCAACTGAGGTCAAGAGC...CTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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| CDS-3UTR CAA 90 bp | TTTGCTCTCACCATGCCAATGATACTTAAGACACAGGGAGAACAACATGGCTACCACCTCCTACAGCTGTaGCAGCCAATTTTCCAACCT | + |
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Preference number: 5 (lower is better) Translates to: FALTMPMILKTQGEQHGYHLLQL*QPIFQP Trigger: AGGTTGGAAAATTGGCTGCAACAGCTGTAGGAGGTG...GTAGCCATGTTGTTCTCCCTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033541.5 |
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