Pregenerated sensors for FUCA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019810Ensembl transcript IDs: ENSMUST00000060212.13, ENSMUST00000120549.2, ENSMUST00000121465.3
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGCTGCCAAACCGCTCAACACACCCAAATGTCCAAAGCTAGCTaGGGGCGCACTCTCACCAACCCATGCTCCTCTGCAGGTACCTTT | + |
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Preference number: 1 (lower is better) Translates to: RCCQTAQHTQMSKAS*GRTLTNPCSSAGTF Trigger: AAAGGTACCTGCAGAGGAGCATGGGTTGGTGAGAGTGCGCCCCCAGCTAGCTTTGGACATTTGGGTGTGTTGAGCGGTTTGGCAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR TCA 90 bp | CTCCCTTATAAGACACCAAGTCCTCTGGTATTAGGGCTAGCCCTATaGTGGTTTAATCTTGACCATTTCAAGAGCTCTGTTTCCAATACA | + |
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Preference number: 1 (lower is better) Translates to: LPYKTPSPLVLGLAL*WFNLDHFKSSVSNT Trigger: TGTATTGGAAACAGAGCTCTTGAAATGGTCAAGATTAAACCATCATAGGGCTAGCCCTAATACCAGAGGACTTGGTGTCTTATAAGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR GCA 90 bp | GTACCCACAAGCCCAGTTAAACACTCTCTCTCTTATACGTTCCCTTaGTCACAGTGTTTTGTCACAGCAACAGAAAAGAAACTTAGACAA | + |
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Preference number: 1 (lower is better) Translates to: VPTSPVKHSLSYTFP*SQCFVTATEKKLRQ Trigger: TTGTCTAAGTTTCTTTTCTGTTGCTGTGACAAAACACTGTGAGCAAGGGAACGTATAAGAGAGAGAGTGTTTAACTGGGCTTGTGGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 90 bp | GACAACATAGTGAGTCTTGTCTCAAGAAGAACAAGTCTTGATAGTTaGAAGGTCTTCAGCAATGGATGTCTTAGAAGATGCCAACCTCGA | + |
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Preference number: 1 (lower is better) Translates to: DNIVSLVSRRTSLDS*KVFSNGCLRRCQPR Trigger: TCGAGGTTGGCATCTTCTAAGACATCCATTGCTGAAGACCTTGCAACTATCAAGACTTGTTCTTCTTGAGACAAGACTCACTATGTTGTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 90 bp | CCAGACTGTCTTGGTTTAGAATCAACAGATAACACAACTCCTGGGTaGAGAATCTATCACCCTAAACTCATTAACTATTCTGTTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: PDCLGLESTDNTTPG*RIYHPKLINYSVRN Trigger: ATTTCTAACAGAATAGTTAATGAGTTTAGGGTGATAGATTCTGCACCCAGGAGTTGTGTTATCTGTTGATTCTAAACCAAGACAGTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CAA 90 bp | TTGTCTGGTCTCAGTGGGAAAGGATGTACCCAGTCCTGGAGTGACTaGATGGGCCAGGATGAGGTGATACCCAGAGGGACCTCCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: LSGLSGKGCTQSWSD*MGQDEVIPRGTSPF Trigger: GAATGGGGAGGTCCCTCTGGGTATCACCTCATCCTGGCCCATCAAGTCACTCCAGGACTGGGTACATCCTTTCCCACTGAGACCAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | GATAGATTAGAGCAGTGGTGCTCTCACAACCTGAGGGTCGTGACCCCTCTGGCAGATAACTGTCTTCTTTaGATGGCTTTCCCCGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: DRLEQWCSHNLRVVTPLADNCLL*MAFPGG Trigger: ACCACCGGGGAAAGCCATGCAAAGAAGACAGTTATC...TGCCAGAGGGGTCACGACCCTCAGGTTGTGAGAGCACCACTGCTCTAATCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGGAGGAGGCTTGTCAGCTTTCTCTAGTGTTTCTCTGTCTACTGCATATCAGCAGCTGCTCAGCTaGCTACCTCCACACCTTCGC | + |
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Preference number: 2 (lower is better) Translates to: HAGGGLSAFSSVSLSTAYQQLLS*LPPHLR Trigger: GCGAAGGTGTGGAGGTAGGCAGCTGAGCAGCTGCTG...ATATGCAGTAGACAGAGAAACACTAGAGAAAGCTGACAAGCCTCCTCCAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CAA 90 bp | CACCAACCCATGCTCCTCTGCAGGTACCTTTCCCCTAGAGCTCAGTaGAGTCACAGCAAATGGAAAACACCAGACTGTCTTGGTTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HQPMLLCRYLSPRAQ*SHSKWKTPDCLGLE Trigger: TTCTAAACCAAGACAGTCTGGTGTTTTCCATTTGCTGTGACTCAACTGAGCTCTAGGGGAAAGGTACCTGCAGAGGAGCATGGGTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTAAACACTCTCTCTCTTGTTGGTGGCACCATTTaGGAAGAGTTGGGTGACACA | + |
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Preference number: 2 (lower is better) Translates to: TVGSSLLYPQAQLNTLSLVGGTI*EELGDT Trigger: TGTGTCACCCAACTCTTCCCAAATGGTGCCACCAAC...AAGAGAGAGAGTGTTTAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CAA 90 bp | GGCTTGCGGATAACTGTCTTCTTTGCATGGCTTTCCCCGGTGGTTTaGCATCTTTATTGTCTCTCCCTTATAAGACACCAAGTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLRITVFFAWLSPVV*HLYCLSLIRHQVLW Trigger: CCAGAGGACTTGGTGTCTTATAAGGGAGAGACAATAAAGATGCAAAACCACCGGGGAAAGCCATGCAAAGAAGACAGTTATCCGCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGTTTCCCCGGTGGTTTTaGATCTTTATTGTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KMRVLERFGFSCTLLLGLFPRWF*IFIVSP Trigger: GGGAGAGACAATAAAGATGCAAAACCACCGGGGAAA...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCGGATAACTGTCTTTCCCCGGTGGTTTTaGATCTTTATTGTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LERFGFSCTLLLGLRITVFPRWF*IFIVSP Trigger: GGGAGAGACAATAAAGATGCAAAACCACCGGGGAAA...GACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGGAGGAGGCTTGTCAGCTTTCTCTAGTGTTTCTCTGTCTACTGCATATCCTGTGAGTTACATGTaGAATGGATTCAGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HAGGGLSAFSSVSLSTAYPVSYM*NGFSRK Trigger: CTTCCTGCTGAATCCATTTCACATGTAACTCACAGG...ATATGCAGTAGACAGAGAAACACTAGAGAAAGCTGACAAGCCTCCTCCAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATGATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACGATAACTGTCTTCTTTaGATGGCTTTCCCCGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FMIGGMGKTKDILDGFNNDNCLL*MAFPGG Trigger: ACCACCGGGGAAAGCCATGCAAAGAAGACAGTTATC...GTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTATCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATAACTGTCTTCTTTGCATaGCTTTCCCCGGTGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RYGEDQRHPGWLQQQEVITVFFA*LSPVVL Trigger: CAAAACCACCGGGGAAAGCCATGCAAAGAAGACAGT...TATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR CAA 90 bp | AACTGTCTTCTTTGCATGGCTTTCCCCGGTGGTTTTGCATCTTTATaGTCTCTCCCTTATAAGACACCAAGTCCTCTGGTATTAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: NCLLCMAFPGGFASL*SLPYKTPSPLVLGL Trigger: TAGCCCTAATACCAGAGGACTTGGTGTCTTATAAGGGAGAGACAATAAAGATGCAAAACCACCGGGGAAAGCCATGCAAAGAAGACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCAGATTCGGTTTCTCCTaGACTCTTCTCCTTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TKDILDGFNNRKLYFLTVRFGFS*TLLLGL Trigger: CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCT...GACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTGAGTTACATGTGAAATaGATTCAGCAGGAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPELHVK*IQQEET Trigger: AGTCTCTTCCTGCTGAATCCATTTCACATGTAACTC...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTaGGTGCAGAAGTTGATCATTTCAACATATATACATAATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCVCVF*VQKLIISTYIHNGS Trigger: AGAGCCATTATGTATATATGTTGAAATGATCAACTTCTGCACCAAGAAAACACACACACACACACACACACACACACACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR GCA 90 bp | TATTTTTATCTTATTTTACAGGAACACAGTGGTAGTTTGAATGAGAATGGCCCCAACTATAAAAAGGGTTaGAGCATTAGGAAGGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: YFYLILQEHSGSLNENGPNYKKG*SIRKVE Trigger: TTCTACCTTCCTAATGCTGCAACCCTTTTTATAGTT...GGGGCCATTCTCATTCAAACTACCACTGTGTTCCTGTAAAATAAGATAAAAATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | GGCAGTCTCCCTGCCCCCGTGGCTATCCCCATGTGGTaGTTCGCCATGCTTGCTGCTGAGGTGCAGTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: GSLPAPVAIPMW*FAMLAAEVQFP Trigger: TGGAAACTGCACCTCAGCAGCAAGCATGGCGAACCACCACATGGGGATAGCCACGGGGGCAGGGAGACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR TCA 72 bp | GGCTATCCCCATGTGGTGGTTCGCCATGCTTGCTGCTaGGGTGCAGTTTCCAGTCACCCAACCCCTGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GYPHVVVRHACC*GAVSSHPTPAA Trigger: AGCTGCAGGGGTTGGGTGACTGGAAACTGCACCTCAGCAGCAAGCATGGCGAACCACCACATGGGGATAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | GCAGCTGCTCAGCTGCCTACCTCCACACCTTCGCTCTaGCACTGTAGGCTCCAGTCTTCTGTACCCACAAGC | + |
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Preference number: 3 (lower is better) Translates to: AAAQLPTSTPSL*HCRLQSSVPTS Trigger: GCTTGTGGGTACAGAAGACTGGAGCCTACAGTGGCAGAGCGAAGGTGTGGAGGTAGGCAGCTGAGCAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR TCA 72 bp | GTCTTCAGTTGGTGGCACCATTTGGGAAGAGTTGGGTaGCACAGCCTTCCTGAAGGACGTGTACCGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: VFSWWHHLGRVG*HSLPEGRVPQG Trigger: GCCCTGCGGTACACGTCCTTCAGGAAGGCTGTGTCACCCAACTCTTCCCAAATGGTGCCACCAACTGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | CAAACCGCTCAACACACCCAAATGTCCAAAGCTAGCTaGGGGCGCACTCTCACCAACCCATGCTCCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: QTAQHTQMSKAS*GRTLTNPCSSA Trigger: TGCAGAGGAGCATGGGTTGGTGAGAGTGCGCCCCCAGCTAGCTTTGGACATTTGGGTGTGTTGAGCGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | GCAGTTTCCAGTCACCCAACCCCTGCAGCTAGGTGCTaGCAAACCGCTCAACACACCCAAATGTCCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: AVSSHPTPAARC*QTAQHTQMSKA Trigger: AGCTTTGGACATTTGGGTGTGTTGAGCGGTTTGGCAGCACCTAGCTGCAGGGGTTGGGTGACTGGAAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | GGTGCAGTTTCCAGTCACCCAACCCCTGCAGCTAGGTaGTGCCAAACCGCTCAACACACCCAAATGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GAVSSHPTPAAR*CQTAQHTQMSK Trigger: TTTGGACATTTGGGTGTGTTGAGCGGTTTGGCAGCACCTAGCTGCAGGGGTTGGGTGACTGGAAACTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR TCA 72 bp | GATGGTCTGTGTAGCTATTGTAGTGCATGCTGGCCCTaGGCTTGTGACCCTCTTGCCTCAGCCTCTCTAGTC | + |
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Preference number: 3 (lower is better) Translates to: DGLCSYCSACWP*ACDPLASASLV Trigger: GACTAGAGAGGCTGAGGCAAGAGGGTCACAAGCTCAGGGCCAGCATGCACTACAATAGCTACACAGACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | TTGTCTGGTCTCAGTGGGAAAGGATGTACCCAGTCCTaGAGTGACTTGATGGGCCAGGATGAGGTGATACCC | + |
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Preference number: 3 (lower is better) Translates to: LSGLSGKGCTQS*SDLMGQDEVIP Trigger: GGGTATCACCTCATCCTGGCCCATCAAGTCACTCCAGGACTGGGTACATCCTTTCCCACTGAGACCAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | GATAGATTAGAGCAGTGGTGCTCTCACAACCTGAGGGTCGTGACCCCTCTGGCACTTTCCCCGGTGGTTTaGCATCTTTATTGTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: DRLEQWCSHNLRVVTPLALSPVV*HLYCLS Trigger: GGAGAGACAATAAAGATGCAAAACCACCGGGGAAAG...TGCCAGAGGGGTCACGACCCTCAGGTTGTGAGAGCACCACTGCTCTAATCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | CCTTCCTCTTCCTCTCTCTTACTTGGAAGGCCCACCTaGTACTTGCCCCGTGATTGTCTTCTAGTCATCCTT | + |
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Preference number: 3 (lower is better) Translates to: PSSSSLLLGRPT*YLPRDCLLVIL Trigger: AAGGATGACTAGAAGACAATCACGGGGCAAGTAGCAGGTGGGCCTTCCAAGTAAGAGAGAGGAAGAGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | AGGCTGGCCTTGAACTTAAAGATAGGCAGATATGCCTaGCTCTGCCCCCTAAGCACTGGGATTAAAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: RLALNLKIGRYA*LCPLSTGIKGM Trigger: CATGCCTTTAATCCCAGTGCTTAGGGGGCAGAGGCAGGCATATCTGCCTATCTTTAAGTTCAAGGCCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | AGACCCAATGTAACCAGCTGTCTCACGCTCCAACTGTaGGGGTCTCACCATGGTAACTGTATCCTCACATTG | + |
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Preference number: 3 (lower is better) Translates to: RPNVTSCLTLQL*GSHHGNCILTL Trigger: CAATGTGAGGATACAGTTACCATGGTGAGACCCGCACAGTTGGAGCGTGAGACAGCTGGTTACATTGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | GTGTCGGCCAAACATTCATTTCCCCACAGCCTCATTTaGAGACCCAATGTAACCAGCTGTCTCACGCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VSAKHSFPHSLI*RPNVTSCLTLQ Trigger: TTGGAGCGTGAGACAGCTGGTTACATTGGGTCTGCAAATGAGGCTGTGGGGAAATGAATGTTTGGCCGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | CACCTTCGCTCTGCCACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTACTTGCTCACAGTGTTTaGTCACAGCAACAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: HLRSATVGSSLLYPQAQLLAHSV*SQQQKR Trigger: TCTTTTCTGTTGCTGTGACAAAACACTGTGAGCAAG...TAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGTGGCAGAGCGAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR TCA 72 bp | TGCTCCTCTGCAGGTACCTTTCCCCTAGAGCTCAGTTaGGTCACAGCAAATGGAAAACACCAGACTGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: CSSAGTFPLELS*VTANGKHQTVL Trigger: CAAGACAGTCTGGTGTTTTCCATTTGCTGTGACTCAACTGAGCTCTAGGGGAAAGGTACCTGCAGAGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | CACCTTCGCTCTGCCACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTAGGTCTAGGCGGTGACTaGTATTTCAAAATTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: HLRSATVGSSLLYPQAQLGLGGD*YFKIST Trigger: TGTAGAAATTTTGAAATACAAGTCACCGCCTAGACC...TAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGTGGCAGAGCGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | TCCAAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTaGACTCTTCTCCTTGGCTTGCGGATAACTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SKMRVLERFGFS*TLLLGLRITVF Trigger: GAAGACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | TATTTGAACACTTGGTCTTCAGTTGGTGGCACCATTTaGGAAGAGTTGGGTGACACAGCCTTCCTGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: YLNTWSSVGGTI*EELGDTAFLKD Trigger: GTCCTTCAGGAAGGCTGTGTCACCCAACTCTTCCCAAATGGTGCCACCAACTGAAGACCAAGTGTTCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGACTCTTCTCCTTGGCTaGCGGATAACTGTCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KMRVLERFGFSCTLLLGLTLLLG*RITVFF Trigger: AAAGAAGACAGTTATCCGCAAGCCAAGGAGAAGAGT...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR GCA 72 bp | CACTCTTCTCCTTGGCTTGCGGATAACTGTCTTCTTTaGATGGCTTTCCCCGGTGGTTTTGCATCTTTATTG | + |
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Preference number: 3 (lower is better) Translates to: HSSPWLADNCLL*MAFPGGFASLL Trigger: CAATAAAGATGCAAAACCACCGGGGAAAGCCATGCAAAGAAGACAGTTATCCGCAAGCCAAGGAGAAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTTTCCCCGGTGGTTTaGCATCTTTATTGTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: TKDILDGFNNRKLYFLTVLSPVV*HLYCLS Trigger: GGAGAGACAATAAAGATGCAAAACCACCGGGGAAAG...GACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | GATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATaGCTTCAACAACAGGAAGTTATATTTCCTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: DRRYGEDQRHPG*LQQQEVIFPHS Trigger: ACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR-3UTR CAA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGGGTTTTGCATCTTTATaGTCTCTCCCTTATAAGACA | + |
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Preference number: 3 (lower is better) Translates to: KMRVLERFGFSCTLLLGLGFASL*SLPYKT Trigger: TGTCTTATAAGGGAGAGACAATAAAGATGCAAAACC...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR TCA 72 bp | AAGACACCAAGTCCTCTGGTATTAGGGCTAGCCCTATaGTGGTTTAATCTTGACCATTTCAAGAGCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: KTPSPLVLGLAL*WFNLDHFKSSV Trigger: AACAGAGCTCTTGAAATGGTCAAGATTAAACCATCATAGGGCTAGCCCTAATACCAGAGGACTTGGTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
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| 3UTR CCA 72 bp | TACCTTTCCCCTAGAGCTCAGTTGAGTCACAGCAAATaGAAAACACCAGACTGTCTTGGTTTAGAATCAACA | + |
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Preference number: 3 (lower is better) Translates to: YLSPRAQLSHSK*KTPDCLGLEST Trigger: TGTTGATTCTAAACCAAGACAGTCTGGTGTTTTCCATTTGCTGTGACTCAACTGAGCTCTAGGGGAAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR TCA 72 bp | TCTCTTACTTGGAAGGCCCACCTGCTACTTGCCCCGTaGTTGTCTTCTAGTCATCCTTATTATGTAATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLTWKAHLLLAP*LSSSHPYYVIN Trigger: ATTAATTACATAATAAGGATGACTAGAAGACAATCACGGGGCAAGTAGCAGGTGGGCCTTCCAAGTAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR GCA 72 bp | AGCCCAGTTAAACACTCTCTCTCTTATACGTTCCCTTaGTCACAGTGTTTTGTCACAGCAACAGAAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPVKHSLSYTFP*SQCFVTATEKK Trigger: TTTCTTTTCTGTTGCTGTGACAAAACACTGTGAGCAAGGGAACGTATAAGAGAGAGAGTGTTTAACTGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR GCA 72 bp | GTGAGTCTTGTCTCAAGAAGAACAAGTCTTGATAGTTaGAAGGTCTTCAGCAATGGATGTCTTAGAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VSLVSRRTSLDS*KVFSNGCLRRC Trigger: GCATCTTCTAAGACATCCATTGCTGAAGACCTTGCAACTATCAAGACTTGTTCTTCTTGAGACAAGACTCAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR CCA 72 bp | AGAAAAATTCTCCATAGATTCGGGTATTTGAACACTTaGTCTTCAGTTGGTGGCACCATTTGGGAAGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RKILHRFGYLNT*SSVGGTIWEEL Trigger: CAACTCTTCCCAAATGGTGCCACCAACTGAAGACCAAGTGTTCAAATACCCGAATCTATGGAGAATTTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR-3UTR CAA 90 bp | GTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTGGTTTTGCATCTTTATaGTCTCTCCCTTATAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VWGRPKTSWMASTTGSYIGFASL*SLPYKT Trigger: TGTCTTATAAGGGAGAGACAATAAAGATGCAAAACC...AATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| 3UTR TCA 72 bp | ATGGATATAGGTGCGCATCATCACATCTGCCCATGTTaGGAACACCTTTTGGGAATGAGTTCTTTAATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: MDIGAHHHICPC*EHLLGMSSLIN Trigger: ATTGATTAAAGAACTCATTCCCAAAAGGTGTTCTCAACATGGGCAGATGTGATGATGCGCACCTATATCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR GCA 72 bp | CTTGGTTTAGAATCAACAGATAACACAACTCCTGGGTaGAGAATCTATCACCCTAAACTCATTAACTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLESTDNTTPG*RIYHPKLINYS Trigger: AGAATAGTTAATGAGTTTAGGGTGATAGATTCTGCACCCAGGAGTTGTGTTATCTGTTGATTCTAAACCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | CCCCCGTGGCTATCCCCATGTGGTGGTTCGCCATGCTaGCTGCTGAGGTGCAGTTTCCAGTCACCCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPWLSPCGGSPC*LLRCSFQSPNP Trigger: GGGGTTGGGTGACTGGAAACTGCACCTCAGCAGCAAGCATGGCGAACCACCACATGGGGATAGCCACGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | CTCAGTGGGAAAGGATGTACCCAGTCCTGGAGTGACTaGATGGGCCAGGATGAGGTGATACCCAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSGKGCTQSWSD*MGQDEVIPRGT Trigger: GGTCCCTCTGGGTATCACCTCATCCTGGCCCATCAAGTCACTCCAGGACTGGGTACATCCTTTCCCACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | GATAGATTAGAGCAGTGGTGCTCTCACAACCTGAGGGTCGTGACCCCTCTGGCAACCACACATCCGGAGTaGCAGTGTCATTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: DRLEQWCSHNLRVVTPLATTHPE*QCHSET Trigger: GGTCTCAGAATGACACTGTCACTCCGGATGTGTGGT...TGCCAGAGGGGTCACGACCCTCAGGTTGTGAGAGCACCACTGCTCTAATCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGTGGTGCTCTCACAACCTGAGGGTCGTGACCCCTCTGGCAAACCTCTAAGGCTAAGAAGCCAGTaGTGTTCCAGTAGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVVLSQPEGRDPSGKPLRLRSQ*CSSSDL Trigger: CAGATCACTACTGGAACAGCACTGGCTTCTTAGCCT...TAGAGGTTTGCCAGAGGGGTCACGACCCTCAGGTTGTGAGAGCACCACTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | GATAGATTAGAGCAGTGGTGCTCTCACAACCTGAGGGTCGTGACCCCTCTGGCAGAAACGGGAAATCGCTaGTTTTGGAATGAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DRLEQWCSHNLRVVTPLAETGNR*FWNELD Trigger: GTCCAGCTCATTCCAAAAGCAGCGATTTCCCGTTTC...TGCCAGAGGGGTCACGACCCTCAGGTTGTGAGAGCACCACTGCTCTAATCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | CACCTTCGCTCTGCCACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTACACAGGACTTCAGGCTaGTATCTGTTCACCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLRSATVGSSLLYPQAQLHRTSG*YLFTNS Trigger: TGAGTTGGTGAACAGATACCAGCCTGAAGTCCTGTG...TAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGTGGCAGAGCGAAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCCACCTCAAGCTCCTTaGCAATGTCCCTCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMRVLERFGFSCTLLLGLPPQAP*QCPSLA Trigger: GGCCAAAGAGGGACATTGTCAAGGAGCTTGAGGTGG...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | TTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCGGATAACTGTCGTCCAAGTCAGTGGCTaGCAATGGCCCAGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LERFGFSCTLLLGLRITVVQVSG*QWPSSS Trigger: AGAACTGCTGGGCCATTGGCAGCCACTGACTTGGAC...GACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTAAACACTCTCTCTCTTGTCCAAGTCAGTGGCTaGCAATGGCCCAGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSSLLYPQAQLNTLSLVQVSG*QWPSSS Trigger: AGAACTGCTGGGCCATTGGCAGCCACTGACTTGGAC...AAGAGAGAGAGTGTTTAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | AGTGTCGGCCAAACATTCATTTCCCCACAGCCTCATTaGCAGACCCAATGTAACCAGCTGTCTCACGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVGQTFISPQPH*QTQCNQLSHAP Trigger: TGGAGCGTGAGACAGCTGGTTACATTGGGTCTGCAAATGAGGCTGTGGGGAAATGAATGTTTGGCCGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATGATGCCACTGGGCTGTaGAGATGTCCAAGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVWGRPKTSWMASTTGSYDATGL*RCPSQW Trigger: CCACTGACTTGGACATCTTCACAGCCCAGTGGCATC...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGGCTCCAGTCTTCTGTACCCACAAGCCCAGTTAAACACTCTCTCTCTTCCCAGCGATCATTGGTaGCTACTGTTTTCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVGSSLLYPQAQLNTLSLPSDHW*LLFSEL Trigger: CAGTTCGGAAAACAGTAGTCACCAATGATCGCTGGG...AAGAGAGAGAGTGTTTAACTGGGCTTGTGGGTACAGAAGACTGGAGCCTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATACCACACATCCGGAGTaGCAGTGTCATTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EVWGRPKTSWMASTTGSYTTHPE*QCHSET Trigger: GGTCTCAGAATGACACTGTCACTCCGGATGTGTGGT...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTTGGCACCAGAGGCCTaGAGAATATCTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGRPKTSWMASTTGSYISLAPEA*RISAHW Trigger: CCAGTGGGCAGATATTCTCCAGGCCTCTGGTGCCAA...GGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGCCCCCAGACTACCTATaGGTTGTCCAAGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGGMGKTKDILDGFNNRKPPDYL*VVQETA Trigger: AGCTGTTTCTTGGACAACCCATAGGTAGTCTGGGGG...CTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | ATGCTCCTCTGCAGGTACCTTTCCCCTAGAGCTCAGTaGAGTCACAGCAAATGGAAAACACCAGACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLCRYLSPRAQ*SHSKWKTPDCL Trigger: AAGACAGTCTGGTGTTTTCCATTTGCTGTGACTCAACTGAGCTCTAGGGGAAAGGTACCTGCAGAGGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | AGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATCGCTGCTTTTGGAATaGGCTGGACTGATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYGEDQRHPGWLQQQEVISLLLE*AGLILQ Trigger: CTGGAGGATCAGTCCAGCTCATTCCAAAAGCAGCGA...TATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | ACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCGCATCTGATGTACGCTaGGCAGAGGTAACTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TKDILDGFNNRKLYFLTVASDVR*AEVTPR Trigger: CCGTGGAGTTACCTCTGCTCAGCGTACATCAGATGC...GACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | GTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTTGGCACCAGAGGCCTaGAGAATATCTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPKTSWMASTTGSYILAPEA*RISAHW Trigger: CCAGTGGGCAGATATTCTCCAGGCCTCTGGTGCCAA...AATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATGACAATGTCCCTCTTTaGCCCCTCATCGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVWGRPKTSWMASTTGSYDNVPL*PLIDCI Trigger: AATGCAGTCGATGAGGGGCCAAAGAGGGACATTGTC...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGTGGTGCCGTCTCCCGTaGGACCAATATTCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KMRVLERFGFSCTLLLGLWCRLP*DQYSSK Trigger: TTTTGATGAATATTGGTCCCACGGGAGACGGCACCA...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTTGGAATGAGCTGGACTaGTCCTCCAGAAAGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPWNELD*SSRKSG Trigger: TCCGCTCTTTCTGGAGGATCAGTCCAGCTCATTCCA...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | GTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTGGAATGAGCTGGACTaGTCCTCCAGAAAGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPKTSWMASTTGSYIWNELD*SSRKSG Trigger: TCCGCTCTTTCTGGAGGATCAGTCCAGCTCATTCCA...AATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | TTTATGATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACATCGCTCCTCAAAAATaGCAGGAATGGTGCCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FMIGGMGKTKDILDGFNNIAPQK*QEWCRL Trigger: GAGACGGCACCATTCCTGTCATTTTTGAGGAGCGAT...GTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTATCATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | AGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATAATCGCTCCTCAAAAATaGCAGGAATGGTGCCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RYGEDQRHPGWLQQQEVIIAPQK*QEWCRL Trigger: GAGACGGCACCATTCCTGTCATTTTTGAGGAGCGAT...TATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | TTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCGGATAACTGTCGGCCTGGAGAATATCTaGCCACTGGTTTGCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LERFGFSCTLLLGLRITVGLENI*PLVCIK Trigger: TTTAATGCAAACCAGTGGGCAGATATTCTCCAGGCC...GACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGAGCCAGGTTCCCATTTaGCTTAATCGCTCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGGMGKTKDILDGFNNRKSQVPI*LNRSSK Trigger: TTTTGAGGAGCGATTAAGGCAAATGGGAACCTGGCT...CTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATGAGAACACTCCCCAGTaGATAAAGATGCCGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVWGRPKTSWMASTTGSYENTPQ*IKMPNL Trigger: CAAGTTCGGCATCTTTATCCACTGGGGAGTGTTCTC...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | TATGATGGTTTAATCTTGACCATTTCAAGAGCTCTGTTTCCAATACAGCCACGTCCACCTCAAGCTCCTTaGCAATGTCCCTCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YDGLILTISRALFPIQPRPPQAP*QCPSLA Trigger: GGCCAAAGAGGGACATTGTCAAGGAGCTTGAGGTGG...ACGTGGCTGTATTGGAAACAGAGCTCTTGAAATGGTCAAGATTAAACCATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTCCCAGCGATCATTGGTaGCTACTGTTTTCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPPSDHW*LLFSEL Trigger: CAGTTCGGAAAACAGTAGTCACCAATGATCGCTGGG...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCAAATGGAAAACACCAGACTGTCTTGGTTTAGAATCAACAGATAACACAGCATCTGATGTACGCTaGGCAGAGGTAACTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HSKWKTPDCLGLESTDNTASDVR*AEVTPR Trigger: CCGTGGAGTTACCTCTGCTCAGCGTACATCAGATGC...TGTGTTATCTGTTGATTCTAAACCAAGACAGTCTGGTGTTTTCCATTTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGGGTTTCTTCTCCTTTTaGCAATACCACCAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGGMGKTKDILDGFNNRKGFFSF*QYHQNH Trigger: ATGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACC...CTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | TTTATGATAGGAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACGAAACGGGAAATCGCTaGTTTTGGAATGAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FMIGGMGKTKDILDGFNNETGNR*FWNELD Trigger: GTCCAGCTCATTCCAAAAGCAGCGATTTCCCGTTTC...GTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTCCTATCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | AGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATAAGGCTAAGAAGCCAGTaGTGTTCCAGTAGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYGEDQRHPGWLQQQEVIRLRSQ*CSSSDL Trigger: CAGATCACTACTGGAACAGCACTGGCTTCTTAGCCT...TATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTGGTGCCGTCTCCCGTaGGACCAATATTCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGRPKTSWMASTTGSYISWCRLP*DQYSSK Trigger: TTTTGATGAATATTGGTCCCACGGGAGACGGCACCA...GGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTCCCCCAGACTACCTATaGGTTGTCCAAGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPPPDYL*VVQETA Trigger: AGCTGTTTCTTGGACAACCCATAGGTAGTCTGGGGG...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | CTTTGCATGGCTTTCCCCGGTGGTTTTGCATCTTTATaGTCTCTCCCTTATAAGACACCAAGTCCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCMAFPGGFASL*SLPYKTPSPLV Trigger: TACCAGAGGACTTGGTGTCTTATAAGGGAGAGACAATAAAGATGCAAAACCACCGGGGAAAGCCATGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATGGTTTCTTCTCCTTTTaGCAATACCACCAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVWGRPKTSWMASTTGSYGFFSF*QYHQNH Trigger: ATGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACC...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR TCA 90 bp | TATTTTTATCTTATTTTACAGGAACACAGTGGTAGTTTGAATGAGAATGGCCCCGATGCCACTGGGCTGTaGAGATGTCCAAGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFYLILQEHSGSLNENGPDATGL*RCPSQW Trigger: CCACTGACTTGGACATCTTCACAGCCCAGTGGCATC...GGGGCCATTCTCATTCAAACTACCACTGTGTTCCTGTAAAATAAGATAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTAGCCAGGTTCCCATTTaGCTTAATCGCTCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPSQVPI*LNRSSK Trigger: TTTTGAGGAGCGATTAAGGCAAATGGGAACCTGGCT...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCGTTTTCCCATTTGTGTaGCAAGAGATAGCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WGRPKTSWMASTTGSYISVFPFV*QEIARI Trigger: AATCCTGGCTATCTCTTGCCACACAAATGGGAAAAC...GGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | AGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATAATCTGCCCACTGGTTTaGATTAAAATACTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RYGEDQRHPGWLQQQEVIICPLV*IKILGC Trigger: ACAGCCAAGTATTTTAATGCAAACCAGTGGGCAGAT...TATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | TATGATGGTTTAATCTTGACCATTTCAAGAGCTCTGTTTCCAATACAGCCACGTCACAGGACTTCAGGCTaGTATCTGTTCACCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YDGLILTISRALFPIQPRHRTSG*YLFTNS Trigger: TGAGTTGGTGAACAGATACCAGCCTGAAGTCCTGTG...ACGTGGCTGTATTGGAAACAGAGCTCTTGAAATGGTCAAGATTAAACCATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTATCTGCCCACTGGTTTaGATTAAAATACTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPICPLV*IKILGC Trigger: ACAGCCAAGTATTTTAATGCAAACCAGTGGGCAGAT...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | CATGCTGGAGGAGGCTTGTCAGCTTTCTCTAGTGTTTCTCTGTCTACTGCATATACTTATCTATTGTCATaGAGTTTTCCCATTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HAGGGLSAFSSVSLSTAYTYLLS*SFPICV Trigger: CACACAAATGGGAAAACTGCATGACAATAGATAAGT...ATATGCAGTAGACAGAGAAACACTAGAGAAAGCTGACAAGCCTCCTCCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAAGAAGCTAATAACACCTTCCCAATTTTCAACTAGGTTTACAACCTGTGAGAACACTCCCCAGTaGATAAAGATGCCGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKKLITPSQFSTRFTTCENTPQ*IKMPNL Trigger: CAAGTTCGGCATCTTTATCCACTGGGGAGTGTTCTC...ACAGGTTGTAAACCTAGTTGAAAATTGGGAAGGTGTTATTAGCTTCTTTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | AATGGATATAGGTGCGCATCATCACATCTGCCCATGTaGAGAACACCTTTTGGGAATGAGTTCTTTAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGYRCASSHLPM*RTPFGNEFFNQ Trigger: TTGATTAAAGAACTCATTCCCAAAAGGTGTTCTCAACATGGGCAGATGTGATGATGCGCACCTATATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCACTTATCTATTGTCATaGAGTTTTCCCATTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKDILDGFNNRKLYFLTVTYLLS*SFPICV Trigger: CACACAAATGGGAAAACTGCATGACAATAGATAAGT...GACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTTTTCTTGGTGCAGAAGTaGATCATTTCAACATATATACATAATGGCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVFLVQK*IISTYIHNGSL Trigger: TAGAGAGCCATTATGTATATATGTTGAAATGATCAACTTCTGCACCAAGAAAACACACACACACACACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121465.3 |
||
| CDS TCA 90 bp | GCCAGTGCTGTTCCAGTAGTGATCTGGCGCGCCCCCATCTCCGTCTaGCCACAGGACTTCAGGCTGGTATCTGTTCACCAACTCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASAVPVVIWRAPISV*PQDFRLVSVHQLIE Trigger: CTCTATGAGTTGGTGAACAGATACCAGCCTGAAGTCCTGTGGTCAGACGGAGATGGGGGCGCGCCAGATCACTACTGGAACAGCACTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 90 bp | TCCACGGTGATGCCACTGGGCTGTGAAGATGTCCAAGTCAGTGGCTaGCAATGGCCCAGCAGTTCTACCTCTGTTTCCCCCAGACTACCT | + |
|
Preference number: 5 (lower is better) Translates to: STVMPLGCEDVQVSG*QWPSSSTSVSPRLP Trigger: AGGTAGTCTGGGGGAAACAGAGGTAGAACTGCTGGGCCATTGGCAGCCACTGACTTGGACATCTTCACAGCCCAGTGGCATCACCGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 90 bp | TTTTCCGAACTGGGCTTTCATTATACAGCCAGGCTAAGAAGCCAGTaGTGTTCCAGTAGTGATCTGGCGCGCCCCCATCTCCGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSELGFHYTARLRSQ*CSSSDLARPHLRLT Trigger: GGTCAGACGGAGATGGGGGCGCGCCAGATCACTACTGGAACAGCACTGGCTTCTTAGCCTGGCTGTATAATGAAAGCCCAGTTCGGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS TCA 90 bp | ATCACATTACTTAGCACAAGAGTCCATCCCCATTTACAGGGCATCTaGTGTACGCTGAGCAGAGGTAACTCCACGGTGATGCCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITLLSTRVHPHLQGI*CTLSRGNSTVMPLG Trigger: GCCCAGTGGCATCACCGTGGAGTTACCTCTGCTCAGCGTACATCAGATGCCCTGTAAATGGGGATGGACTCTTGTGCTAAGTAATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | TTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCGGATAACTGTCATAAAGATGCCGAACTaGGCCTGGTCGAACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LERFGFSCTLLLGLRITVIKMPN*AWSNQA Trigger: AGCCTGGTTCGACCAGGCCAAGTTCGGCATCTTTAT...GACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATGCCACCTCAAGCTCCTaGACAATGTCCCTCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVWGRPKTSWMASTTGSYATSSS*TMSLFG Trigger: GCCAAAGAGGGACATTGTCAAGGAGCTTGAGGTGGC...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGGGGTTTCTTCTCCTTTaGCCAATACCACCAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KMRVLERFGFSCTLLLGLGFLLL*PIPPEP Trigger: TGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACCC...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATACTCCCCAGCGATCATaGGTGACTACTGTTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EVWGRPKTSWMASTTGSYTPQRS*VTTVFR Trigger: TCGGAAAACAGTAGTCACCAATGATCGCTGGGGAGT...ATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | TTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGCGGATAACTGTCCAGACTACCTATGGGTaGTCCAAGAAACAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LERFGFSCTLLLGLRITVQTTYG*SKKQLS Trigger: GGAAAGCTGTTTCTTGGACAACCCATAGGTAGTCTG...GACAGTTATCCGCAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 90 bp | TTTCAGCTTCCCGCCTGTAGCCCCAGGAGAACTTATCTATTGTCATaGAGTTTTCCCATTTGTGTGGCAAGAGATAGCCAGGATTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FQLPACSPRRTYLLS*SFPICVARDSQDCN Trigger: GTTACAATCCTGGCTATCTCTTGCCACACAAATGGGAAAACTGCATGACAATAGATAAGTTCTCCTGGGGCTACAGGCGGGAAGCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTATAAAGATGCCGAACTaGGCCTGGTCGAACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPIKMPN*AWSNQA Trigger: AGCCTGGTTCGACCAGGCCAAGTTCGGCATCTTTAT...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTACTCCCCAGCGATCATaGGTGACTACTGTTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPTPQRS*VTTVFR Trigger: TCGGAAAACAGTAGTCACCAATGATCGCTGGGGAGT...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 90 bp | GCCGTCTCCCGTGGGACCAATATTCATCAAAAGATTTCCACCACATaGGACTGTTTCCACAAGTTTCTTCACCAACTCTTCAATTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVSRGTNIHQKISTT*DCFHKFLHQLFNCK Trigger: CTTACAATTGAAGAGTTGGTGAAGAAACTTGTGGAAACAGTCGCATGTGGTGGAAATCTTTTGATGAATATTGGTCCCACGGGAGACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CCA 90 bp | GCCCCAGGAGAACTTATCTATTGTCATGCAGTTTTCCCATTTGTGTaGCAAGAGATAGCCAGGATTGTAACGGTCACTGCAAGTATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: APGELIYCHAVFPFV*QEIARIVTVTASIV Trigger: TACTATACTTGCAGTGACCGTTACAATCCTGGCTATCTCTTGCCACACAAATGGGAAAACTGCATGACAATAGATAAGTTCTCCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | GTATGGGGAAGACCAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTCAGACTACCTATGGGTaGTCCAAGAAACAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VWGRPKTSWMASTTGSYIQTTYG*SKKQLS Trigger: GGAAAGCTGTTTCTTGGACAACCCATAGGTAGTCTG...AATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTGGTCTTCCCCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | AAGATGAGGGTGTTAGAGAGATTCGGTTTCTCCTGCACTCTTCTCCTTGGCTTGAGGAGAACTTATCTATaGTCATGCAGTTTTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KMRVLERFGFSCTLLLGLRRTYL*SCSFPI Trigger: AATGGGAAAACTGCATGACAATAGATAAGTTCTCCT...CAAGCCAAGGAGAAGAGTGCAGGAGAAACCGAATCTCTCTAACACCCTCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | TATGATGGTTTAATCTTGACCATTTCAAGAGCTCTGTTTCCAATACAGCCACGTGGGTTTCTTCTCCTTTaGCCAATACCACCAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: YDGLILTISRALFPIQPRGFLLL*PIPPEP Trigger: TGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACCC...ACGTGGCTGTATTGGAAACAGAGCTCTTGAAATGGTCAAGATTAAACCATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGACATCCTGGATGGCTTCAACAACAGGAAGTTATATTTCCTCACAGTCCTAGGAGAACTTATCTATaGTCATGCAGTTTTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QRHPGWLQQQEVIFPHSPRRTYL*SCSFPI Trigger: AATGGGAAAACTGCATGACAATAGATAAGTTCTCCT...AGGACTGTGAGGAAATATAACTTCCTGTTGTTGAAGCCATCCAGGATGTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS TCA 72 bp | GTTCCAGTAGTGATCTGGCGCGCCCCCATCTCCGTCTaGCCACAGGACTTCAGGCTGGTATCTGTTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VPVVIWRAPISV*PQDFRLVSVHQ Trigger: TTGGTGAACAGATACCAGCCTGAAGTCCTGTGGTCAGACGGAGATGGGGGCGCGCCAGATCACTACTGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 72 bp | CTGGGCTTTCATTATACAGCCAGGCTAAGAAGCCAGTaGTGTTCCAGTAGTGATCTGGCGCGCCCCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGFHYTARLRSQ*CSSSDLARPHL Trigger: GAGATGGGGGCGCGCCAGATCACTACTGGAACAGCACTGGCTTCTTAGCCTGGCTGTATAATGAAAGCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CAA 90 bp | CCAAAGTGCAAGCCAGTCCTGTTCCTCACAGCCACCTCAAGCTCCTaGACAATGTCCCTCTTTGGCCCCTCATCGACTGCATTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKCKPVLFLTATSSS*TMSLFGPSSTAFQF Trigger: GAACTGGAATGCAGTCGATGAGGGGCCAAAGAGGGACATTGTCAAGGAGCTTGAGGTGGCTGTGAGGAACAGGACTGGCTTGCACTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060212.13 ENSMUST00000120549.2 ENSMUST00000121465.3 |
||
| CDS CCA 72 bp | CACAGCCACCTCAAGCTCCTTGACAATGTCCCTCTTTaGCCCCTCATCGACTGCATTCCAGTTCCAAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: HSHLKLLDNVPL*PLIDCIPVPRT Trigger: CGTTCTTGGAACTGGAATGCAGTCGATGAGGGGCCAAAGAGGGACATTGTCAAGGAGCTTGAGGTGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060212.13 ENSMUST00000120549.2 ENSMUST00000121465.3 |
||
| CDS TCA 72 bp | GCCAGGTTCCCATTTGCCTTAATCGCTCCTCAAAAATaGCAGGAATGGTGCCGTCTCCCGTGGGACCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: ARFPFALIAPQK*QEWCRLPWDQY Trigger: ATATTGGTCCCACGGGAGACGGCACCATTCCTGTCATTTTTGAGGAGCGATTAAGGCAAATGGGAACCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS TCA 72 bp | CTTAGCACAAGAGTCCATCCCCATTTACAGGGCATCTaGTGTACGCTGAGCAGAGGTAACTCCACGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRVHPHLQGI*CTLSRGNSTVM Trigger: CATCACCGTGGAGTTACCTCTGCTCAGCGTACATCAGATGCCCTGTAAATGGGGATGGACTCTTGTGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS GCA 72 bp | CCCGCCTGTAGCCCCAGGAGAACTTATCTATTGTCATaGAGTTTTCCCATTTGTGTGGCAAGAGATAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PACSPRRTYLLS*SFPICVARDSQ Trigger: CTGGCTATCTCTTGCCACACAAATGGGAAAACTGCATGACAATAGATAAGTTCTCCTGGGGCTACAGGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CAA 72 bp | CCATGTTTGCAGATAGACCCGACTCCCCAGCGATCATaGGTGACTACTGTTTTCCGAACTGGGCTTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: PCLQIDPTPQRS*VTTVFRTGLSL Trigger: TAATGAAAGCCCAGTTCGGAAAACAGTAGTCACCAATGATCGCTGGGGAGTCGGGTCTATCTGCAAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CAA 90 bp | ATGGCCCAGCAGTTCTACCTCTGTTTCCCCCAGACTACCTATGGGTaGTCCAAGAAACAGCTTTCCAGAGATGGGCCATTTAAGAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: MAQQFYLCFPQTTYG*SKKQLSRDGPFKKN Trigger: ATTTTTCTTAAATGGCCCATCTCTGGAAAGCTGTTTCTTGGACAACCCATAGGTAGTCTGGGGGAAACAGAGGTAGAACTGCTGGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS TCA 72 bp | GAAACGGGAAATCGCTGCTTTTGGAATGAGCTGGACTaGTCCTCCAGAAAGAGCGGATGGAACCATTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETGNRCFWNELD*SSRKSGWNHSK Trigger: TTTTGAATGGTTCCATCCGCTCTTTCTGGAGGATCAGTCCAGCTCATTCCAAAAGCAGCGATTTCCCGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS TCA 72 bp | CAAGAACGGTCTGAGCCCCACATTGTAAAGCCTTCGTaGTGTTTAGAAGTGAAGACCACATATTTGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QERSEPHIVKPS*CLEVKTTYLAP Trigger: TGGTGCCAAATATGTGGTCTTCACTTCTAAACATCACGAAGGCTTTACAATGTGGGGCTCAGACCGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060212.13 ENSMUST00000120549.2 ENSMUST00000121465.3 |
||
| CDS GCA 72 bp | GACCACATATTTGGCACCAGAGGCCTGGAGAATATCTaGCCACTGGTTTGCATTAAAATACTTGGCTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DHIFGTRGLENI*PLVCIKILGCK Trigger: TTTACAGCCAAGTATTTTAATGCAAACCAGTGGGCAGATATTCTCCAGGCCTCTGGTGCCAAATATGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060212.13 ENSMUST00000120549.2 ENSMUST00000121465.3 |
||
| CDS GCA 72 bp | TTCATAAAGTCCACAAACTGGGGTTTCTTCTCCTTTTaGCAATACCACCAGAACCATTCACTACCAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FIKSTNWGFFSF*QYHQNHSLPKL Trigger: CAGCTTTGGTAGTGAATGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACCCCAGTTTGTGGACTTTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CCA 72 bp | GAACTTATCTATTGTCATGCAGTTTTCCCATTTGTGTaGCAAGAGATAGCCAGGATTGTAACGGTCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELIYCHAVFPFV*QEIARIVTVTA Trigger: TGCAGTGACCGTTACAATCCTGGCTATCTCTTGCCACACAAATGGGAAAACTGCATGACAATAGATAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CAA 72 bp | GTTCATAAAGTCCACAAACTGGGGTTTCTTCTCCTTTaGCCAATACCACCAGAACCATTCACTACCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VHKVHKLGFLLL*PIPPEPFTTKA Trigger: AGCTTTGGTAGTGAATGGTTCTGGTGGTATTGGCAAAAGGAGAAGAAACCCCAGTTTGTGGACTTTATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060212.13 ENSMUST00000121465.3 |
||
| CDS CAA 72 bp | TGGAGAATATCTGCCCACTGGTTTGCATTAAAATACTaGGCTGTAAATAGCACTACAAAATCTTCATACTTA | + |
|
Preference number: 6 (lower is better) Translates to: WRISAHWFALKY*AVNSTTKSSYL Trigger: TAAGTATGAAGATTTTGTAGTGCTATTTACAGCCAAGTATTTTAATGCAAACCAGTGGGCAGATATTCTCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060212.13 ENSMUST00000120549.2 ENSMUST00000121465.3 |
||