Pregenerated sensors for FTSJ3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020706Ensembl transcript IDs: ENSMUST00000021048.7
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGAACCACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTaGAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: KEPQATTKASNTESP*RLHKRFDPSQAKMW Trigger: CCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTGGTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR TCA 90 bp | TTTGATCCATCACAAGCCAAGATGTGGGTTGTCAGTGTAACACGATaGAGAAATGTTTCCTCAGTGCTTTCATGGTACTCCTCTGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: FDPSQAKMWVVSVTR*RNVSSVLSWYSSVA Trigger: TGCTACAGAGGAGTACCATGAAAGCACTGAGGAAACATTTCTTCATCGTGTTACACTGACAACCCACATCTTGGCTTGTGATGGATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCAATACTGAGTCCCCCTaGAGGCTTCATAAAAGATTT | + |
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Preference number: 2 (lower is better) Translates to: TGKGWERTPKEPQATTKANTESP*RLHKRF Trigger: AAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATT...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR-3UTR CCA 90 bp | CAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAAGATTTGATCTCCTCAGTGCTTTCATaGTACTCCTCTGTAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QQRPAILSPPEGFIKDLISSVLS*YSSVAA Trigger: AGCTGCTACAGAGGAGTACCATGAAAGCACTGAGGA...GATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR TCA 72 bp | CAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTaGAGGCTTCATAAAAGATTTGATCCATCACAAGCC | + |
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Preference number: 3 (lower is better) Translates to: QATTKASNTESP*RLHKRFDPSQA Trigger: GGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR-3UTR CAA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACGGCTTCATAAAAGATTaGATCCATCACAAGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNGFIKD*IHHKPR Trigger: TCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCC...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| 3UTR TCA 72 bp | TCACAAGCCAAGATGTGGGTTGTCAGTGTAACACGATaGAGAAATGTTTCCTCAGTGCTTTCATGGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: SQAKMWVVSVTR*RNVSSVLSWYS Trigger: GGAGTACCATGAAAGCACTGAGGAAACATTTCTTCATCGTGTTACACTGACAACCCACATCTTGGCTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | CAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGCCCCTCCAGGGTCAGTaGCAGCCTCTGTCCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QLSQSHKASRENCTPPSLPLQGQ*QPLSPR Trigger: TCTTGGGGACAGAGGCTGTCACTGACCCTGGAGGGG...CAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTAACTTGGCAGCCACCTaGAGCCATCCGCCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: CSSSPNPTKPPERTVHLPNLAAT*SHPPGA Trigger: TGCGCCTGGCGGATGGCTGCAGGTGGCTGCCAAGTT...AGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | AAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCAGTCTTTCCAGACTGGGGCTTCGTGGCCTaGACACGGTGGAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KPPERTVHLPLCPSVFPDWGFVA*TRWNSC Trigger: GCAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCA...GTCTGGAAAGACTGAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCGCTTTCTGCAGGAACTaGAAGCGGCGATTGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKAAFCRN*KRRLSW Trigger: CCAGCTCAATCGCCGCTTTCAGTTCCTGCAGAAAGC...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCTGTCCCGCCGGCTCTTaGCTACTTTGCCTTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKACPAGS*LLCLSC Trigger: GCAAGAAAGGCAAAGTAGGCAAGAGCCGGCGGGACA...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCTGGAGGTGGATCTGTTaGCTGCTGCTCCTTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKAWRWIC*LLLLLT Trigger: CGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCA...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTTCGCAGGGAGAACATaGCTGTCTCCCCCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELFAGRT*LSPPHL Trigger: CAGATGAGGGGGAGACAGGCATGTTCTCCCTGCGAA...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACTCATGGCGAGAGGCTTaGGGCTTCGTGGCCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNSWREA*GFVAWT Trigger: TGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGA...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | CACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAAGGCTGCTGCTCCTTCTaGCGGCTCTTGTACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HRLQQRPAILSPPEGFIKGCCSF*RLLYSS Trigger: GCTGCTGTACAAGAGCCGTCAGAAGGAGCAGCAGCC...TTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCTCCACTACCTTGAAATaGCCTTTGACTCCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKASTTLK*PLTPAG Trigger: GCCAGCTGGAGTCAAAGGTCATTTCAAGGTAGTGGA...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGGGGGAGAGGCTTGATTaGAACGAGGTCCACTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: ILEKGGRGLRRNHRLQQRGERLD*NEVHSY Trigger: GTAGGAGTGGACCTCGTTCCAATCAAGCCTCTCCCC...CCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | CAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGCAAGTTAGTAGGTGGTaGAGGTGGATCTGTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLSQSHKASRENCTPPSLQVSRW*RWICWL Trigger: CAGCCAACAGATCCACCTCCACCACCTACTAACTTG...CAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCTGGGAGCCCCATCATTaGGCACAACATCAACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVAALPIPQSLQRELYTSWEPHH*AQHQLS Trigger: GGAAAGTTGATGTTGTGCTCAATGATGGGGCTCCCA...GGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | CTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGATTCGCCCCAGCACTTTaGTGTCCTGACAGCATACTC | + |
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Preference number: 4 (lower is better) Translates to: LSWYSSVAALPIPQSLQRFAPAL*CPDSIL Trigger: GAGTATGCTGTCAGGACATCAAAGTGCTGGGGCGAA...TCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACTGTCTCCCCCTCATCTaGAATAGAAACCCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YSSVAALPIPQSLQRELYCLPLI*NRNPRQ Trigger: CTGCCTGGGGTTTCTATTGCAGATGAGGGGGAGACA...GTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGACTTCCTCTAATAACTaGTGGCCACGGATGGTTCGC | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELTSSNN*WPRMVR Trigger: GCGAACCATCCGTGGCCAGCAGTTATTAGAGGAAGT...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCCTCTTCCTGCAGTACTaGCTTTTCTTCCAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKALFLQY*LFFQWY Trigger: GTACCACTGGAAGAAAAGGCAGTACTGCAGGAAGAG...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | AACCACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATACTTGTACAGCAGCTGTaGCTGACTGATCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NHRLQQRPAILSPPEGFILVQQL*LTDLQG Trigger: GCCCTGGAGATCAGTCAGGCACAGCTGCTGTACAAG...TATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | GTGCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGATTTCTGCAGATTCATaGCGAGAGGCTTGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLSWYSSVAALPIPQSLQISADS*REAWGF Trigger: GAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAAT...CTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | CTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGGAAGTCAACAGGATTaGCAGCTCGCAAGAAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSWYSSVAALPIPQSLQRGSQQD*QLARSP Trigger: CGGACTTCTTGCGAGCTGCCAATCCTGTTGACTTCC...TCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCGTCTTCAGTTGTAGCTaGATGCTGTGCCAACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKAVFSCS*MLCQLF Trigger: GAAGAGTTGGCACAGCATCCAGCTACAACTGAAGAC...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGACCTCATTCTGGCCCTaGGGAGATTTCTTCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELTSFWP*GDFFSV Trigger: GACTGAGAAGAAATCTCCCCAGGGCCAGAATGAGGT...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCATCGTCCTCAGCATCTaGCACATAGATGTCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: SQSHKASRENCTPPSLSFIVLSI*HIDVIP Trigger: AGGGATGACATCTATGTGTCAGATGCTGAGGACGAT...GAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTGATCCGAGTGTGTCCTaGCTCCTGCCAGCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FYSNTGKGWERTPKEPQADPSVS*LLPALL Trigger: CAGAAGAGCTGGCAGGAGTCAGGACACACTCGGATC...AGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGGAGGCTGATGTCCAATaGCTTTGCTTGCTCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELEADVQ*LCLLFQ Trigger: CTGAAAGAGCAAGCAAAGGCATTGGACATCAGCCTC...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | CAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAAGATTTGATCTCGACACGCTCCCGCTaGTTCCTCTGCTCACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QQRPAILSPPEGFIKDLISTRSR*FLCSRS Trigger: GCTTCGTGAGCAGAGGAAGCAGCGGGAGCGTGTCGA...GATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | CCCCCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGGTGGCCTGGACACGGTaGAACAGCTGCTGGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: PPEGFIKDLIHHKPRCGLVAWTR*NSCWKI Trigger: GATCTTCCAGCAGCTGTTCCACCGTGTCCAGGCCAC...CAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGAGATTTCGCTGGCCTTaGAGAGGAAGTCAACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELRFRWP*RGSQQD Trigger: ATCCTGTTGACTTCCTCTCCAAGGCCAGCGAAATCT...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACCCCTCCGTTTCTTTCTaGCCTTGGCCTCAGCTACTT | + |
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Preference number: 4 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNPSVSF*PWPQLL Trigger: AAGTAGCTGAGGCCAAGGCCAGAAAGAAACGGAGGG...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAAGATTTGATCCATCACCATTGGGGAGAGGCTTaGTTGGAACGAGGTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: RPAILSPPEGFIKDLIHHHWGEA*LERGPL Trigger: GAGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATG...GTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCGGAGCCAGGAATCCTTaGCAGACTACAAAGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: SVAALPIPQSLQRELYTSGARNP*QTTKIS Trigger: AGAAATCTTTGTAGTCTGTCAAGGATTCCTGGCTCC...GGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGCTCTTCATCATCTATTaGGATTTCGCTGGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: WYSSVAALPIPQSLQRELLFIIY*DFAGLG Trigger: TCCAAGGCCAGCGAAATCTCAATAGATGATGAAGAG...CAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | AAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCAGTCTTTCCAGACCACCTTTTCCCGTTCTaGGATGTCCACTGTATTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPPERTVHLPLCPSVFPDHLFPF*DVHCIH Trigger: GTGAATACAGTGGACATCTCAGAACGGGAAAAGGTG...GTCTGGAAAGACTGAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACTGGCTACAACATAAGTaGCCTGGCGTTTCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNWLQHK*PGVSPC Trigger: GCAAGGAGAAACGCCAGGTCACTTATGTTGTAGCCA...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACATTTCTTGATGGGCCGTaGATTGATTTCCCGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: YSNTGKGWERTPKEPQATFLDGP*IDFPPA Trigger: CGCTGGCGGGAAATCAATGCACGGCCCATCAAGAAA...TGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | ACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCCTTCCTTCCGTTGTTGTaGTCTCTGATCCTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGKGWERTPKEPQATTKAFLPLL*SLILLH Trigger: ATGAAGAAGGATCAGAGAGCACAACAACGGAAGGAA...GGCCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | AAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCAGTCTTTCCAGACTTCTTCTTCTTCTTCTaGGCTGAGGCTGATGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: KPPERTVHLPLCPSVFPDFFFFF*AEADVQ Trigger: TTGGACATCAGCCTCAGCTCAGAAGAAGAAGAAGAA...GTCTGGAAAGACTGAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | AACCACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATATCTTCTTCTTCCTCTTaGGTTCTGCCACTTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NHRLQQRPAILSPPEGFISSSSS*VLPLLG Trigger: CCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGA...TATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | CTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGACTACAAAGATTTCTaGAGATTCATGGCGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSWYSSVAALPIPQSLQRDYKDF*RFMARG Trigger: GCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTC...TCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | ATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGTCAGTTGTAGCTGGATaGTGTGCCAACTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILEKGGRGLRRNHRLQQRSVVAG*CANSSS Trigger: TGATGAAGAGTTGGCACAGCATCCAGCTACAACTGA...CCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTGATGTCCAATGCCTTTaGTTGCTCTTTCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSSPNPTKPPERTVHLPDVQCL*LLFQLL Trigger: AAGAAGCTGAAAGAGCAAGCAAAGGCATTGGACATC...AGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | AGTGCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCACTTTGTCTCAGCTACTaGCTCTTCTTCATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFMVLLCSSSPNPTKPPLCLSY*LFFITF Trigger: GAAGGTGATGAAGAAGAGGCAGTAGCTGAGACAAAG...TGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TTTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTTCCCGCTGCTTCCTCTaGTCACGAAGCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FYSNTGKGWERTPKEPQASRCFL*SRSNFF Trigger: GAAGAAGTTGCTTCGTGAGCAGAGGAAGCAGCGGGA...AGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | CCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCAATTCACCACAGCTTCTaGCTTCTTTTTGGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PNPTKPPERTVHLPLCPSIHHSF*LLFGLF Trigger: GAACAGACCAAAAAGAAGGCAGAAGCTGTGGTGAAT...TGAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | GTGCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGATAGCCTTCAGCCTTTaGCTTCTTCTTTGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSWYSSVAALPIPQSLQIAFSL*LLLCHQ Trigger: TTGGTGACAAAGAAGAAGCCAAAGGCTGAAGGCTAT...CTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCTATTGAGATTTCGCTaGCCTTGGAGAGGAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILEKGGRGLRRNHRLQQRLLRFR*PWRGSQ Trigger: TTGACTTCCTCTCCAAGGCCAGCGAAATCTCAATAG...CCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAATACAGCGTTCTGTTGTaGTATCCTCCTGGAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQILEKGGRGLRRNHRLQYSVLL*YPPGES Trigger: TGACTCTCCAGGAGGATATCACAACAGAACGCTGTA...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAATATTTCACTGGGTCCTaGATAGGCACCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQILEKGGRGLRRNHRLQYFTGS*IGTTSN Trigger: GTTTGAGGTGGTGCCTATTCAGGACCCAGTGAAATA...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR TCA 90 bp | TTTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTCGTTGTTGTGCTCTCTaGTCCTTCTTCATCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYSNTGKGWERTPKEPQARCCAL*SFFIRE Trigger: CTCTCGGATGAAGAAGGATCAGAGAGCACAACAACG...AGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | CACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAATGGCGTATCCGATGCTaGTTTTCTTCCTGTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRLQQRPAILSPPEGFIKWRIRC*FSSCAN Trigger: GTTTGCACAGGAAGAAAAGCAGCATCGGATACGCCA...TTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | AGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCGGCGATTGAGCTaGATCAGTTTGAAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPAILSPPEGFIKDLIHHKRRLS*ISLKAE Trigger: CTCTGCCTTCAAACTGATCCAGCTCAATCGCCGCTT...GTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACCAGTGGTACCAGCAATaGATTTTCTCCTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNQWYQQ*IFSFFL Trigger: GAGGAAGAAGGAGAAAATCCATTGCTGGTACCACTG...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | TTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACCTTCAAGTTAGTAGGTaGTGGAGGTGGATCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKYWKRVGEDSEGTTGYLQVSR*WRWICW Trigger: CCAACAGATCCACCTCCACCACCTACTAACTTGAAG...GTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAATTATCAACAGGCAGCTaGCGTATCCGATGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQILEKGGRGLRRNHRLQLSTGS*RIRCCF Trigger: AAAGCAGCATCGGATACGCCAGCTGCCTGTTGATAA...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAATCCAATGCCTTTGCTTaGTCTTTCAGCTTCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQILEKGGRGLRRNHRLQSNAFA*SFSFLA Trigger: GGCTAAGAAGCTGAAAGAGCAAGCAAAGGCATTGGA...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | CCCCCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGAGTTCTGCCACTTCTTaGGCTTTCATCTCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPEGFIKDLIHHKPRCGLSSATS*AFISAR Trigger: TCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACT...CAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | TATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACATGTAGCTGGATGCTGTaGCAACTCTTCATCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YSNTGKGWERTPKEPQATCSWML*QLFIIY Trigger: ATAGATGATGAAGAGTTGGCACAGCATCCAGCTACA...TGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR GCA 90 bp | AGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTCAGTGTACACTATCTGAGCTGTTaGCTCTTTCCTCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLHKRFDPSQAKMWVVSVHYLSC*LFPPLQ Trigger: CTGGAGGGGAGGAAAGAGGCAACAGCTCAGATAGTG...TACACTGACAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CCA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAAGATAACCAGTCTCCTTaGCCAAGTGATAGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQILEKGGRGLRRNHRLQDNQSP*PSDRTC Trigger: ACAAGTTCTATCACTTGGCCAAGGAGACTGGTTATC...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR TCA 90 bp | AACCACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATATTATTGTCATCTACTTaGGTAAACCGCAAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHRLQQRPAILSPPEGFILLSST*VNRKYF Trigger: GAAGTACTTGCGGTTTACTCAAGTAGATGACAATAA...TATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | GGCGCAGCACACAGGTCCAACAAGGCCCGGGCTTTCTGCAGGAACTaGAAGCGGCGATTGAGCTGGATCAGTTTGAAGGCAGAGCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAAHRSNKARAFCRN*KRRLSWISLKAERE Trigger: TTCGCGCTCTGCCTTCAAACTGATCCAGCTCAATCGCCGCTTTCAGTTCCTGCAGAAAGCCCGGGCCTTGTTGGACCTGTGTGCTGCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | ATCTGTTGGCTGCTGCTCCTTCTGACGGCTCTTGTACAGCAGCTGTaGCTGACTGATCTCCAGGGCTTCGTCAGCATCATCCTCTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICWLLLLLTALVQQL*LTDLQGFVSIILYP Trigger: GGGATAGAGGATGATGCTGACGAAGCCCTGGAGATCAGTCAGGCACAGCTGCTGTACAAGAGCCGTCAGAAGGAGCAGCAGCCAACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | TCCTTCCTCAGGGCCTGCCTACAGCGTTCTGTTGTGATATCCTCCTaGAGAGTCACCACATTGGGGAGAGGCTTGATTGGAACGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRACLQRSVVISS*RVTTLGRGLIGTRS Trigger: GGACCTCGTTCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCAGGAGGATATCACAACAGAACGCTGTAGGCAGGCCCTGAGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | CTACAAAGATTTCTGCAGATTCATGGCGAGAGGCTTGGGGCTTCGTaGCCTGGACACGGTGGAACAGCTGCTGGAAGATCCACAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRFLQIHGERLGAS*PGHGGTAAGRSTAR Trigger: CCTTGCTGTGGATCTTCCAGCAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | AACCTTGTCCGGAGCCAGGAATCCTTGACAGACTACAAAGATTTCTaGAGATTCATGGCGAGAGGCTTGGGGCTTCGTGGCCTGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: NLVRSQESLTDYKDF*RFMARGLGLRGLDT Trigger: CGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTCTGTCAAGGATTCCTGGCTCCGGACAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | CAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGGAGATTTCGCTGGCCTaGGAGAGGAAGTCAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QLSQSHKASRENCTPPSLEISLA*ERKSTG Trigger: TCCTGTTGACTTCCTCTCCAAGGCCAGCGAAATCTC...CAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | GTGCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGGAACCACAGGCTAGCTaGCTCTTCCTGCAGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSWYSSVAALPIPQSLQEPQAS*LFLQYC Trigger: GCAGTACTGCAGGAAGAGCAAGCTAGCCTGTGGTTC...CTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | CACTTTCCAGCTATCTTCATCCTCACTACTGCTGCTGTCACTATCTaGGCTGTTGCCTCTTTCCTCCCCTCCAGGGTCAGTGACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFPAIFILTTAAVTI*AVASFLPSRVSDSL Trigger: GAGGCTGTCACTGACCCTGGAGGGGAGGAAAGAGGCAACAGCTCAGATAGTGACAGCAGCAGTAGTGAGGATGAAGATAGCTGGAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | TCACACCACGGGACACTTTCCAGCTATCTTCATCCTCACTACTGCTaGTGTCACTATCTGAGCTGTTGCCTCTTTCCTCCCCTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHHGTLSSYLHPHYC*CHYLSCCLFPPLQG Trigger: ACCCTGGAGGGGAGGAAAGAGGCAACAGCTCAGATAGTGACAGCAGCAGTAGTGAGGATGAAGATAGCTGGAAAGTGTCCCGTGGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | CTGCTCCTTCAGATCCGAGTGTGTCCTGACTCCTGCCAGCTCTTCTaGATCCAGGTCACTTTCCAGAGAAGTATCATCATCGTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQIRVCPDSCQLF*IQVTFQRSIIIVLS Trigger: GCTGAGGACGATGATGATACTTCTCTGGAAAGTGACCTGGATCCAGAAGAGCTGGCAGGAGTCAGGACACACTCGGATCTGAAGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | CTGGCCCTGGGGAGATTTCTTCTCAGTCTTCAAGTTAGTAGGTGGTaGAGGTGGATCTGTTGGCTGCTGCTCCTTCTGACGGCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LALGRFLLSLQVSRW*RWICWLLLLLTALV Trigger: TACAAGAGCCGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACTGAGAAGAAATCTCCCCAGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTAGGAAGTCAACAGGATaGGCAGCTCGCAAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSSPNPTKPPERTVHLPRKSTG*AARKKS Trigger: GGACTTCTTGCGAGCTGCCAATCCTGTTGACTTCCT...AGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | CCCGCTGCTTCCTCTGCTCACGAAGCAACTTCTTCTTCTTCCTCTTaGGTTCTGCCACTTCTTGGGCTTTCATCTCTGCCAGAGTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAASSAHEATSSSSS*VLPLLGLSSLPESD Trigger: ATCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGAAGCAGCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | GCCTCCGGACCTTACGGCCTACACCCTTTTTGGCTACAACATAAGTaGCCTGGCGTTTCTCCTTGCCAAGTCCAGCTTTCTTGTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASGPYGLHPFWLQHK*PGVSPCQVQLSCRD Trigger: GTCTCTACAAGAAAGCTGGACTTGGCAAGGAGAAACGCCAGGTCACTTATGTTGTAGCCAAAAAGGGTGTAGGCCGTAAGGTCCGGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | ATAGAAACCCCAGGCAGATCCATCTTCAGCTCGACACGCTCCCGCTaGTTCCTCTGCTCACGAAGCAACTTCTTCTTCTTCCTCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IETPGRSIFSSTRSR*FLCSRSNFFFFLLS Trigger: ACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGAAGCAGCGGGAGCGTGTCGAGCTGAAGATGGATCTGCCTGGGGTTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | CCGCAAGTACTTCTGCTCCTTCAGATCCGAGTGTGTCCTGACTCCTaGCAGCTCTTCTGGATCCAGGTCACTTTCCAGAGAAGTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: PQVLLLLQIRVCPDS*QLFWIQVTFQRSII Trigger: GATGATACTTCTCTGGAAAGTGACCTGGATCCAGAAGAGCTGGCAGGAGTCAGGACACACTCGGATCTGAAGGAGCAGAAGTACTTGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | TCCTCTATCCCACTGAAGCCGTCCTTGGAGAACCACAGGCTAGCTTaGTCTTCCTGCAGTACTGCCTTTTCTTCCAGTGGTACCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSIPLKPSLENHRLA*SSCSTAFSSSGTSN Trigger: ATTGCTGGTACCACTGGAAGAAAAGGCAGTACTGCAGGAAGAGCAAGCTAGCCTGTGGTTCTCCAAGGACGGCTTCAGTGGGATAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | CCGTTTCTTTCTGGCCTTGGCCTCAGCTACTTTCTTGATGGGCCGTaGATTGATTTCCCGCCAGCGTTTTCGGTAATGTTCCACCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLSGLGLSYFLDGP*IDFPPAFSVMFHLL Trigger: AAGGAGGTGGAACATTACCGAAAACGCTGGCGGGAAATCAATGCACGGCCCATCAAGAAAGTAGCTGAGGCCAAGGCCAGAAAGAAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | TTTCTTCTCAGTCTTCAAGTTAGTAGGTGGTGGAGGTGGATCTGTTaGCTGCTGCTCCTTCTGACGGCTCTTGTACAGCAGCTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLSLQVSRWWRWIC*LLLLLTALVQQLCL Trigger: CAGGCACAGCTGCTGTACAAGAGCCGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACTGAGAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | ATTCTGGCCCTGGGGAGATTTCTTCTCAGTCTTCAAGTTAGTAGGTaGTGGAGGTGGATCTGTTGGCTGCTGCTCCTTCTGACGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILALGRFLLSLQVSR*WRWICWLLLLLTAL Trigger: AAGAGCCGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACTGAGAAGAAATCTCCCCAGGGCCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGAACTGTACTGGAGAGTCACCACATaGGGGAGAGGCTTGATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YSSVAALPIPQSLQRELYWRVTT*GRGLIG Trigger: TCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCA...GTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAACTAGCCCCCACATaGGGAGCCCCATCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQILEKGGRGLRRNHRLQQLAPT*GAPSLS Trigger: GCTCAATGATGGGGCTCCCAATGTGGGGGCTAGTTG...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | ATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAAGTGGAGGTGGATCTGTaGGCTGCTGCTCCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IQILEKGGRGLRRNHRLQVEVDL*AAAPSD Trigger: GTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCAC...TTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | GGAGAGGAAGTCAACAGGATTGGCAGCTCGCAAGAAGTCCGTAACTaGGGTTCGGTGATAAAGAGTAAGGTCACCTTCGGCATAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEEVNRIGSSQEVRN*GSVIKSKVTFGIAF Trigger: GAAGGCTATGCCGAAGGTGACCTTACTCTTTATCACCGAACCTCAGTTACGGACTTCTTGCGAGCTGCCAATCCTGTTGACTTCCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | GCCGTCCTTGGAGAACCACAGGCTAGCTTGCTCTTCCTGCAGTACTaGCTTTTCTTCCAGTGGTACCAGCAATGGATTTTCTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVLGEPQASLLFLQY*LFFQWYQQWIFSFF Trigger: GAAGAAGGAGAAAATCCATTGCTGGTACCACTGGAAGAAAAGGCAGTACTGCAGGAAGAGCAAGCTAGCCTGTGGTTCTCCAAGGACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS GCA 90 bp | TGTTCCACCTCCTTCTTATCAACAGGCAGCTGGCGTATCCGATGCTaGTTTTCTTCCTGTGCAAACCACTCAGGAAGTTCTCCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSTSFLSTGSWRIRC*FSSCANHSGSSPSS Trigger: AGAGGAGGGAGAACTTCCTGAGTGGTTTGCACAGGAAGAAAAGCAGCATCGGATACGCCAGCTGCCTGTTGATAAGAAGGAGGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | CTTCATCCGAGAGTCCACTACCTTGAAATGACCTTTGACTCCAGCTaGCCTCCGGACCTTACGGCCTACACCCTTTTTGGCTACAACATA | + |
|
Preference number: 5 (lower is better) Translates to: LHPRVHYLEMTFDSS*PPDLTAYTLFGYNI Trigger: TATGTTGTAGCCAAAAAGGGTGTAGGCCGTAAGGTCCGGAGGCCAGCTGGAGTCAAAGGTCATTTCAAGGTAGTGGACTCTCGGATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | AACCACAGGCTACAACAAAGGCCAGCAATACTGAGTCCCCCTGAAGGCTTCATAGATACAGGCATAAACTaGGCAGCCACCTGCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NHRLQQRPAILSPPEGFIDTGIN*AATCSH Trigger: ATGGCTGCAGGTGGCTGCCAAGTTTATGCCTGTATC...TATGAAGCCTTCAGGGGGACTCAGTATTGCTGGCCTTTGTTGTAGCCTGTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACACATTGGGGAGAGGCTaGATTGGAACGAGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNTLGRG*IGTRST Trigger: AGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATGT...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | GTGCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGTTGGGAGCCCCATCATaGAGCACAACATCAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLSWYSSVAALPIPQSLQLGAPS*STTSTF Trigger: GAAAGTTGATGTTGTGCTCAATGATGGGGCTCCCAA...CTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | CCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTCATTCATGGCGAGAGGCTaGGGGCTTCGTGGCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PEGFIKDLIHHKPRCGLSFMARG*GLRGLD Trigger: GTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAA...TGACAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | ATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCGTTTCTTTCTGGCCTaGGCCTCAGCTACTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILEKGGRGLRRNHRLQQRRFFLA*ASATFL Trigger: CAAGAAAGTAGCTGAGGCCAAGGCCAGAAAGAAACG...CCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | GCTTTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGGCTTCTGCCTTCTTTTaGGTCTGTTCCAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFMVLLCSSSPNPTKPPEASAFF*VCSSFF Trigger: GAAGAAGCTGGAACAGACCAAAAAGAAGGCAGAAGC...CTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 90 bp | CAGAGTCCGATTAAGCTGTTCTTCCTCTCTCTCTTCTTCTTCCTCTaGCGCCTGCTTTGTCTCAGCTACTGCCTCTTCTTCATCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSPIKLFFLSLFFFL*RLLCLSYCLFFITF Trigger: GAAGGTGATGAAGAAGAGGCAGTAGCTGAGACAAAGCAGGCGCCAGAGGAAGAAGAAGAGAGAGAGGAAGAACAGCTTAATCGGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTTGTCCCGCCGGCTCTaGCCTACTTTGCCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPEGFIKDLIHHKPRCGLLSRRL*PTLPFL Trigger: CAAGAAAGGCAAAGTAGGCAAGAGCCGGCGGGACAA...CAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | ATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACAAAGGCATAGCCTTCAGCCTTaGGCTTCTTCTTTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ILEKGGRGLRRNHRLQQRHSLQP*ASSLSP Trigger: TGGTGACAAAGAAGAAGCCAAAGGCTGAAGGCTATG...CCTTTGTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | CCCAATCCCACAAAGCCTCCAGAGAGAACTGTACACCTCCCTCTCTGTCCTTCACATATCGCCGAAGCTTaGTTCTCCAATTCAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PNPTKPPERTVHLPLCPSHIAEA*FSNSEE Trigger: CTCTTCTGAATTGGAGAACAAAGCTTCGGCGATATG...TGAAGGACAGAGAGGGAGGTGTACAGTTCTCTCTGGAGGCTTTGTGGGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | TATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACATCACTATCTGAGCTGTaGCCTCTTTCCTCCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSNTGKGWERTPKEPQATSLSEL*PLSSPP Trigger: TGGAGGGGAGGAAAGAGGCAACAGCTCAGATAGTGA...TGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACGCCTCAGCTACTTTCTaGATGGGCCGTGCATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNASATF*MGRALI Trigger: AATCAATGCACGGCCCATCAAGAAAGTAGCTGAGGC...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTATTGAGCTGGATCAGTTaGAAGGCAGAGCGCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: FIQILEKGGRGLRRNHRLLSWIS*KAERER Trigger: TCGTTCGCGCTCTGCCTTCAAACTGATCCAGCTCAA...TAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | TTCAGAAGAGACCTAAGTTCCTTTCGCCCCAGCACTTTGATGTCCTaGCAGCATACTCTAATGTCTTCAGTTGTAGCTGGATGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRRDLSSFRPSTLMS*QHTLMSSVVAGCCA Trigger: GGCACAGCATCCAGCTACAACTGAAGACATTAGAGTATGCTGTCAGGACATCAAAGTGCTGGGGCGAAAGGAACTTAGGTCTCTTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 90 bp | CGATTAAGCTGTTCTTCCTCTCTCTCTTCTTCTTCCTCTGGCGCCTaGTTTGTCTCAGCTACTGCCTCTTCTTCATCACCTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLSCSSSLSSSSSGA*FVSATASSSSPSSS Trigger: AGAAGAAGAAGGTGATGAAGAAGAGGCAGTAGCTGAGACAAAGCAGGCGCCAGAGGAAGAAGAAGAGAGAGAGGAAGAACAGCTTAATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAAATTTAGCATCAACCTaGTCCGGAGCCAGGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSNTGKGWERTPKEPQATNLAST*SGARNP Trigger: AGGATTCCTGGCTCCGGACAAGGTTGATGCTAAATT...TGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | TGTCTCAGCTACTGCCTCTTCTTCATCACCTTCTTCTTCTTCTTCTaGGCTGAGGCTGATGTCCAATGCCTTTGCTTGCTCTTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLSYCLFFITFFFFF*AEADVQCLCLLFQL Trigger: AAGCTGAAAGAGCAAGCAAAGGCATTGGACATCAGCCTCAGCTCAGAAGAAGAAGAAGAAGGTGATGAAGAAGAGGCAGTAGCTGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 90 bp | ATCCAGGTCACTTTCCAGAGAAGTATCATCATCGTCCTCAGCATCTaGCACATAGATGTCATCCCTTGGCAGATCAGACAGAAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQVTFQRSIIIVLSI*HIDVIPWQIRQKGV Trigger: GACACCTTTCTGTCTGATCTGCCAAGGGATGACATCTATGTGTCAGATGCTGAGGACGATGATGATACTTCTCTGGAAAGTGACCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS GCA 90 bp | TCTTCTTCTTCTTCTGAGCTGAGGCTGATGTCCAATGCCTTTGCTTaGTCTTTCAGCTTCTTAGCCACATATCGCCGAAGCTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSELRLMSNAFA*SFSFLATYRRSFVL Trigger: GAGAACAAAGCTTCGGCGATATGTGGCTAAGAAGCTGAAAGAGCAAGCAAAGGCATTGGACATCAGCCTCAGCTCAGAAGAAGAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CCA 90 bp | TCACGAAGCAACTTCTTCTTCTTCCTCTTGAGTTCTGCCACTTCTTaGGCTTTCATCTCTGCCAGAGTCCGATTAAGCTGTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSNFFFFLLSSATS*AFISARVRLSCSSS Trigger: AGAGGAAGAACAGCTTAATCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTCGGAGCCAGGAATCCTaGACAGACTACAAAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYSNTGKGWERTPKEPQARSQES*TDYKDF Trigger: GAAATCTTTGTAGTCTGTCAAGGATTCCTGGCTCCG...AGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTTTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTGTCCAATGCCTTTGCTaGCTCTTTCAGCTTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FYSNTGKGWERTPKEPQAVQCLC*LFQLLS Trigger: GCTAAGAAGCTGAAAGAGCAAGCAAAGGCATTGGAC...AGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTATTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACTTCTTCTTCTTCCTCTaGAGTTCTGCCACTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFKYWKRVGEDSEGTTGYFFFFL*SSATSW Trigger: CCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAA...GTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | CCTGAAGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTCATTGATGGGCCGTGCATaGATTTCCCGCCAGCGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PEGFIKDLIHHKPRCGLSLMGRA*ISRQRF Trigger: AAAACGCTGGCGGGAAATCAATGCACGGCCCATCAA...TGACAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTCATGGTACTCCTCTGTAGCAGCTCTCCCAATCCCACAAAGCCTCCAGAGAGATCCTTAAAGGCAAACTaGGGATCAAAGAATTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FMVLLCSSSPNPTKPPERSLKAN*GSKNLA Trigger: TGCTAAATTCTTTGATCCCAAGTTTGCCTTTAAGGA...TCTCTCTGGAGGCTTTGTGGGATTGGGAGAGCTGCTACAGAGGAGTACCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | AGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTCAGTGTAGAGTTCTGCCACTTCTaGGGCTTTCATCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLHKRFDPSQAKMWVVSVEFCHF*GFHLCQ Trigger: CTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTC...TACACTGACAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | TTCAAATACTGGAAAAGGGTGGGAGAGGACTCCGAAGGAACCACAGGCTACAACTTAAAAGCATACCGGTaGAACGAGTTATCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKYWKRVGEDSEGTTGYNLKAYR*NELSMR Trigger: CCTCATAGATAACTCGTTCAACCGGTATGCTTTTAA...GTTGTAGCCTGTGGTTCCTTCGGAGTCCTCTCCCACCCTTTTCCAGTATTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS-3UTR CAA 90 bp | AGGCTTCATAAAAGATTTGATCCATCACAAGCCAAGATGTGGGTTGTCAGTGTAACCTGGCGTTTCTCCTaGCCAAGTCCAGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLHKRFDPSQAKMWVVSVTWRFS*PSPAFL Trigger: CAAGAAAGCTGGACTTGGCAAGGAGAAACGCCAGGT...TACACTGACAACCCACATCTTGGCTTGTGATGGATCAAATCTTTTATGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | GCAGATTCATGGCGAGAGGCTTGGGGCTTCGTGGCCTaGACACGGTGGAACAGCTGCTGGAAGATCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ADSWREAWGFVA*TRWNSCWKIHS Trigger: GCTGTGGATCTTCCAGCAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | GTCCTGAATAGGCACCACCTCAAACCCATCCTCATCTaGCTTAGAGCCACGGCCTCGCTTCACACCACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLNRHHLKPILI*LRATASLHTTG Trigger: TCCCGTGGTGTGAAGCGAGGCCGTGGCTCTAAGGCAGATGAGGATGGGTTTGAGGTGGTGCCTATTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | GCTCCTTCCTCAGGGCCTGCCTACAGCGTTCTGTTGTaGTATCCTCCTGGAGAGTCACCACATTGGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APSSGPAYSVLL*YPPGESPHWGE Trigger: CTCTCCCCAATGTGGTGACTCTCCAGGAGGATATCACAACAGAACGCTGTAGGCAGGCCCTGAGGAAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | CTGCTGCTCCTTCTGACGGCTCTTGTACAGCAGCTGTaGCTGACTGATCTCCAGGGCTTCGTCAGCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLTALVQQL*LTDLQGFVSII Trigger: GATGATGCTGACGAAGCCCTGGAGATCAGTCAGGCACAGCTGCTGTACAAGAGCCGTCAGAAGGAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | CCTTCTGACGGCTCTTGTACAGCAGCTGTGCCTGACTaGTCTCCAGGGCTTCGTCAGCATCATCCTCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: PSDGSCTAAVPD*SPGLRQHHPLS Trigger: GGATAGAGGATGATGCTGACGAAGCCCTGGAGATCAGTCAGGCACAGCTGCTGTACAAGAGCCGTCAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | CCAGGCAGATCCATCTTCAGCTCGACACGCTCCCGCTaGTTCCTCTGCTCACGAAGCAACTTCTTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGRSIFSSTRSR*FLCSRSNFFFF Trigger: GAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGAAGCAGCGGGAGCGTGTCGAGCTGAAGATGGATCTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | ACTACAAAGATTTCTGCAGATTCATGGCGAGAGGCTTaGGGCTTCGTGGCCTGGACACGGTGGAACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TTKISADSWREA*GFVAWTRWNSC Trigger: GCAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | GACTACAAAGATTTCTGCAGATTCATGGCGAGAGGCTaGGGGCTTCGTGGCCTGGACACGGTGGAACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DYKDFCRFMARG*GLRGLDTVEQL Trigger: CAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | TCCAGGGCTTCGTCAGCATCATCCTCTATCCCACTGAAGCCGTCCTaGGAGAACCACAGGCTAGCTTGCTCTTCCTGCAGTACTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRASSASSSIPLKPS*ENHRLACSSCSTAF Trigger: AAAGGCAGTACTGCAGGAAGAGCAAGCTAGCCTGTGGTTCTCCAAGGACGGCTTCAGTGGGATAGAGGATGATGCTGACGAAGCCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS GCA 72 bp | CGGAGCCAGGAATCCTTGACAGACTACAAAGATTTCTaGAGATTCATGGCGAGAGGCTTGGGGCTTCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSQESLTDYKDF*RFMARGLGLRG Trigger: GCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTCTGTCAAGGATTCCTGGCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS GCA 72 bp | CCACTGAAGCCGTCCTTGGAGAACCACAGGCTAGCTTaGTCTTCCTGCAGTACTGCCTTTTCTTCCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLKPSLENHRLA*SSCSTAFSSSG Trigger: ACCACTGGAAGAAAAGGCAGTACTGCAGGAAGAGCAAGCTAGCCTGTGGTTCTCCAAGGACGGCTTCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CCA 72 bp | AGAGTCCACTACCTTGAAATGACCTTTGACTCCAGCTaGCCTCCGGACCTTACGGCCTACACCCTTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVHYLEMTFDSS*PPDLTAYTLFG Trigger: GCCAAAAAGGGTGTAGGCCGTAAGGTCCGGAGGCCAGCTGGAGTCAAAGGTCATTTCAAGGTAGTGGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CAA 72 bp | TGGACCCAACTAGCCCCCACATTGGGAGCCCCATCATaGAGCACAACATCAACTTTCCAGGTCTTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WTQLAPTLGAPS*STTSTFQVFSS Trigger: GGAGCTGAAGACCTGGAAAGTTGATGTTGTGCTCAATGATGGGGCTCCCAATGTGGGGGCTAGTTGGGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CAA 72 bp | TCGTCAGCATCATCCTCTATCCCACTGAAGCCGTCCTaGGAGAACCACAGGCTAGCTTGCTCTTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSASSSIPLKPS*ENHRLACSSCS Trigger: ACTGCAGGAAGAGCAAGCTAGCCTGTGGTTCTCCAAGGACGGCTTCAGTGGGATAGAGGATGATGCTGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CAA 90 bp | TCCTTGACAGACTACAAAGATTTCTGCAGATTCATGGCGAGAGGCTaGGGGCTTCGTGGCCTGGACACGGTGGAACAGCTGCTGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLTDYKDFCRFMARG*GLRGLDTVEQLLED Trigger: ATCTTCCAGCAGCTGTTCCACCGTGTCCAGGCCACGAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTCTGTCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS CAA 90 bp | TTGGTCTGTTCCAGCTTCTTCAGCACCCTCCGTTTCTTTCTGGCCTaGGCCTCAGCTACTTTCTTGATGGGCCGTGCATTGATTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVCSSFFSTLRFFLA*ASATFLMGRALISR Trigger: GCGGGAAATCAATGCACGGCCCATCAAGAAAGTAGCTGAGGCCAAGGCCAGAAAGAAACGGAGGGTGCTGAAGAAGCTGGAACAGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
||
| CDS TCA 72 bp | GCAAGTACTTCTGCTCCTTCAGATCCGAGTGTGTCCTaGCTCCTGCCAGCTCTTCTGGATCCAGGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASTSAPSDPSVS*LLPALLDPGHF Trigger: AAAGTGACCTGGATCCAGAAGAGCTGGCAGGAGTCAGGACACACTCGGATCTGAAGGAGCAGAAGTACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | GCTATCTTCATCCTCACTACTGCTGCTGTCACTATCTaGGCTGTTGCCTCTTTCCTCCCCTCCAGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: AIFILTTAAVTI*AVASFLPSRVS Trigger: ACTGACCCTGGAGGGGAGGAAAGAGGCAACAGCTCAGATAGTGACAGCAGCAGTAGTGAGGATGAAGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | CCTTCAGGGTCCAGAATTCGGTATTTCACTGGGTCCTaGATAGGCACCACCTCAAACCCATCCTCATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSGSRIRYFTGS*IGTTSNPSSSA Trigger: GGCAGATGAGGATGGGTTTGAGGTGGTGCCTATTCAGGACCCAGTGAAATACCGAATTCTGGACCCTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | AGTCTTCAAGTTAGTAGGTGGTGGAGGTGGATCTGTTaGCTGCTGCTCCTTCTGACGGCTCTTGTACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLQVSRWWRWIC*LLLLLTALVQQ Trigger: CTGCTGTACAAGAGCCGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | CGTTCTGTTGTGATATCCTCCTGGAGAGTCACCACATaGGGGAGAGGCTTGATTGGAACGAGGTCCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSVVISSWRVTT*GRGLIGTRSTP Trigger: AGGAGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCAGGAGGATATCACAACAGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | TCCCGCTGCTTCCTCTGCTCACGAAGCAACTTCTTCTTCTTCCTCTaGAGTTCTGCCACTTCTTGGGCTTTCATCTCTGCCAGAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SRCFLCSRSNFFFFL*SSATSWAFISARVR Trigger: TCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGAAGCAGCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | GTCAACAGGATTGGCAGCTCGCAAGAAGTCCGTAACTaGGGTTCGGTGATAAAGAGTAAGGTCACCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VNRIGSSQEVRN*GSVIKSKVTFG Trigger: GCCGAAGGTGACCTTACTCTTTATCACCGAACCTCAGTTACGGACTTCTTGCGAGCTGCCAATCCTGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | GGGACACTTTCCAGCTATCTTCATCCTCACTACTGCTaGTGTCACTATCTGAGCTGTTGCCTCTTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GTLSSYLHPHYC*CHYLSCCLFPP Trigger: GGGAGGAAAGAGGCAACAGCTCAGATAGTGACAGCAGCAGTAGTGAGGATGAAGATAGCTGGAAAGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | GGGAGATTTCTTCTCAGTCTTCAAGTTAGTAGGTGGTaGAGGTGGATCTGTTGGCTGCTGCTCCTTCTGACG | + |
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Preference number: 6 (lower is better) Translates to: GRFLLSLQVSRW*RWICWLLLLLT Trigger: CGTCAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACTGAGAAGAAATCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | CTGGGGAGATTTCTTCTCAGTCTTCAAGTTAGTAGGTaGTGGAGGTGGATCTGTTGGCTGCTGCTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGRFLLSLQVSR*WRWICWLLLLL Trigger: CAGAAGGAGCAGCAGCCAACAGATCCACCTCCACCACCTACTAACTTGAAGACTGAGAAGAAATCTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | TCTGTTGTGATATCCTCCTGGAGAGTCACCACATTGGGGAGAGGCTaGATTGGAACGAGGTCCACTCCTACAATAAGACTGGATACAGGC | + |
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Preference number: 6 (lower is better) Translates to: SVVISSWRVTTLGRG*IGTRSTPTIRLDTG Trigger: GCCTGTATCCAGTCTTATTGTAGGAGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCAGGAGGATATCACAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | TGCCTACAGCGTTCTGTTGTGATATCCTCCTGGAGAGTCACCACATaGGGGAGAGGCTTGATTGGAACGAGGTCCACTCCTACAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: CLQRSVVISSWRVTT*GRGLIGTRSTPTIR Trigger: TCTTATTGTAGGAGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCAGGAGGATATCACAACAGAACGCTGTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | CGTTCTGAGATGTCCACTGTATTCACCACAGCTTCTGCCTTCTTTTaGGTCTGTTCCAGCTTCTTCAGCACCCTCCGTTTCTTTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSEMSTVFTTASAFF*VCSSFFSTLRFFLA Trigger: GGCCAGAAAGAAACGGAGGGTGCTGAAGAAGCTGGAACAGACCAAAAAGAAGGCAGAAGCTGTGGTGAATACAGTGGACATCTCAGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | CCTTACGGCCTACACCCTTTTTGGCTACAACATAAGTaGCCTGGCGTTTCTCCTTGCCAAGTCCAGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PYGLHPFWLQHK*PGVSPCQVQLS Trigger: AGAAAGCTGGACTTGGCAAGGAGAAACGCCAGGTCACTTATGTTGTAGCCAAAAAGGGTGTAGGCCGTAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | TCTTCTGAGCTGAGGCTGATGTCCAATGCCTTTGCTTaGTCTTTCAGCTTCTTAGCCACATATCGCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSELRLMSNAFA*SFSFLATYRRS Trigger: GCTTCGGCGATATGTGGCTAAGAAGCTGAAAGAGCAAGCAAAGGCATTGGACATCAGCCTCAGCTCAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | TGTTCTTCCTCTCTCTCTTCTTCTTCCTCTGGCGCCTaGTTTGTCTCAGCTACTGCCTCTTCTTCATCACCT | + |
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Preference number: 6 (lower is better) Translates to: CSSSLSSSSSGA*FVSATASSSSP Trigger: AGGTGATGAAGAAGAGGCAGTAGCTGAGACAAAGCAGGCGCCAGAGGAAGAAGAAGAGAGAGAGGAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | CCTCTTGAGTTCTGCCACTTCTTGGGCTTTCATCTCTaGCAGAGTCCGATTAAGCTGTTCTTCCTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLEFCHFLGFHL*QSPIKLFFLSL Trigger: GAGAGAGAGGAAGAACAGCTTAATCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS GCA 72 bp | CACGGGACACTTTCCAGCTATCTTCATCCTCACTACTaGTGCTGTCACTATCTGAGCTGTTGCCTCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: HGTLSSYLHPHY*CCHYLSCCLFP Trigger: AGGAAAGAGGCAACAGCTCAGATAGTGACAGCAGCAGTAGTGAGGATGAAGATAGCTGGAAAGTGTCCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | GCTGTGCCAACTCTTCATCATCTATTGAGATTTCGCTaGCCTTGGAGAGGAAGTCAACAGGATTGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: AVPTLHHLLRFR*PWRGSQQDWQL Trigger: GAGCTGCCAATCCTGTTGACTTCCTCTCCAAGGCCAGCGAAATCTCAATAGATGATGAAGAGTTGGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | ATATCCTCCTGGAGAGTCACCACATTGGGGAGAGGCTaGATTGGAACGAGGTCCACTCCTACAATAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: ISSWRVTTLGRG*IGTRSTPTIRL Trigger: CAGTCTTATTGTAGGAGTGGACCTCGTTCCAATCAAGCCTCTCCCCAATGTGGTGACTCTCCAGGAGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | GCCAACTCTTCATCATCTATTGAGATTTCGCTGGCCTaGGAGAGGAAGTCAACAGGATTGGCAGCTCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ANSSSSIEISLA*ERKSTGLAARK Trigger: CTTGCGAGCTGCCAATCCTGTTGACTTCCTCTCCAAGGCCAGCGAAATCTCAATAGATGATGAAGAGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | CATCGTCCTCAGCATCTGACACATAGATGTCATCCCTaGGCAGATCAGACAGAAAGGTGTCTGCAGCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HRPQHLTHRCHP*ADQTERCLQRS Trigger: TGAACGCTGCAGACACCTTTCTGTCTGATCTGCCAAGGGATGACATCTATGTGTCAGATGCTGAGGACGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | TCCTCTGCTCACGAAGCAACTTCTTCTTCTTCCTCTTaGGTTCTGCCACTTCTTGGGCTTTCATCTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSAHEATSSSSS*VLPLLGLSSLP Trigger: TGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | CCAACTCTTCATCATCTATTGAGATTTCGCTGGCCTTaGAGAGGAAGTCAACAGGATTGGCAGCTCGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PTLHHLLRFRWP*RGSQQDWQLAR Trigger: TCTTGCGAGCTGCCAATCCTGTTGACTTCCTCTCCAAGGCCAGCGAAATCTCAATAGATGATGAAGAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | TTCCTCTGCTCACGAAGCAACTTCTTCTTCTTCCTCTaGAGTTCTGCCACTTCTTGGGCTTTCATCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FLCSRSNFFFFL*SSATSWAFISA Trigger: GGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAGCAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | ATGTCCACTGTATTCACCACAGCTTCTGCCTTCTTTTaGGTCTGTTCCAGCTTCTTCAGCACCCTCCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MSTVFTTASAFF*VCSSFFSTLRF Trigger: GAAACGGAGGGTGCTGAAGAAGCTGGAACAGACCAAAAAGAAGGCAGAAGCTGTGGTGAATACAGTGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | CTCACGAAGCAACTTCTTCTTCTTCCTCTTGAGTTCTGCCACTTCTaGGGCTTTCATCTCTGCCAGAGTCCGATTAAGCTGTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTKQLLLLPLEFCHF*GFHLCQSPIKLFFL Trigger: GAGGAAGAACAGCTTAATCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTGCTTCGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | AAGTATCATCATCGTCCTCAGCATCTGACACATAGATGTCATCCCTaGGCAGATCAGACAGAAAGGTGTCTGCAGCGTTCATGTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KYHHRPQHLTHRCHP*ADQTERCLQRSCLL Trigger: AAGGAGACATGAACGCTGCAGACACCTTTCTGTCTGATCTGCCAAGGGATGACATCTATGTGTCAGATGCTGAGGACGATGATGATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | GACCTAAGTTCCTTTCGCCCCAGCACTTTGATGTCCTaGCAGCATACTCTAATGTCTTCAGTTGTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DLSSFRPSTLMS*QHTLMSSVVAG Trigger: TCCAGCTACAACTGAAGACATTAGAGTATGCTGTCAGGACATCAAAGTGCTGGGGCGAAAGGAACTTAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | TACTGCCTCTTCTTCATCACCTTCTTCTTCTTCTTCTaGGCTGAGGCTGATGTCCAATGCCTTTGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: YCLFFITFFFFF*AEADVQCLCLL Trigger: GAGCAAGCAAAGGCATTGGACATCAGCCTCAGCTCAGAAGAAGAAGAAGAAGGTGATGAAGAAGAGGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 72 bp | CAACTTCTTCTTCTTCCTCTTGAGTTCTGCCACTTCTaGGGCTTTCATCTCTGCCAGAGTCCGATTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QLLLLPLEFCHF*GFHLCQSPIKL Trigger: CAGCTTAATCGGACTCTGGCAGAGATGAAAGCCCAAGAAGTGGCAGAACTCAAGAGGAAGAAGAAGAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | ACTTTCCAGAGAAGTATCATCATCGTCCTCAGCATCTaGCACATAGATGTCATCCCTTGGCAGATCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: TFQRSIIIVLSI*HIDVIPWQIRQ Trigger: CTGTCTGATCTGCCAAGGGATGACATCTATGTGTCAGATGCTGAGGACGATGATGATACTTCTCTGGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | AGCTTGCTCTTCCTGCAGTACTGCCTTTTCTTCCAGTaGTACCAGCAATGGATTTTCTCCTTCTTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLLFLQYCLFFQ*YQQWIFSFFLF Trigger: AAAGAGGAAGAAGGAGAAAATCCATTGCTGGTACCACTGGAAGAAAAGGCAGTACTGCAGGAAGAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CCA 72 bp | AAGAGTAAGGTCACCTTCGGCATAGCCTTCAGCCTTTaGCTTCTTCTTTGTCACCAACTCAGTAACAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: KSKVTFGIAFSL*LLLCHQLSNSF Trigger: AAAACTGTTACTGAGTTGGTGACAAAGAAGAAGCCAAAGGCTGAAGGCTATGCCGAAGGTGACCTTACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS CAA 90 bp | TACCAGCAATGGATTTTCTCCTTCTTCCTCTTTATTGTCATCTACTaGAGTAAACCGCAAGTACTTCTGCTCCTTCAGATCCGAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: YQQWIFSFFLFIVIY*SKPQVLLLLQIRVC Trigger: ACACACTCGGATCTGAAGGAGCAGAAGTACTTGCGGTTTACTCAAGTAGATGACAATAAAGAGGAAGAAGGAGAAAATCCATTGCTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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| CDS TCA 72 bp | GGATTTTCTCCTTCTTCCTCTTTATTGTCATCTACTTaGGTAAACCGCAAGTACTTCTGCTCCTTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: GFSPSSSLLSST*VNRKYFCSFRS Trigger: GGATCTGAAGGAGCAGAAGTACTTGCGGTTTACTCAAGTAGATGACAATAAAGAGGAAGAAGGAGAAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021048.7 |
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