Pregenerated sensors for FTSJ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031171Ensembl transcript IDs: ENSMUST00000033513.10, ENSMUST00000115594.8, ENSMUST00000115595.8, ENSMUST00000149063.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGATACAACTCCTAAGAGTCAAAGCCCAGAACAGGGACACTTGTaGAGCTCTTTCCCGGGCACTGCGGAGTTGCTGTGGCAATGGGTG | + |
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Preference number: 1 (lower is better) Translates to: TDTTPKSQSPEQGHL*SSFPGTAELLWQWV Trigger: CACCCATTGCCACAGCAACTCCGCAGTGCCCGGGAAAGAGCTCCACAAGTGTCCCTGTTCTGGGCTTTGACTCTTAGGAGTTGTATCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR GCA 90 bp | GTCCTCAGGTTGACTGTTCCAGCTCCATCCCTCATCTCTGCGTGCTaGTCATGGAATAGGGCAAGCACAAGGTTTCCCCTTCCTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: VLRLTVPAPSLISAC*SWNRASTRFPLPLP Trigger: AGGCAAAGGAAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGATGGAGCTGGAACAGTCAACCTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR CCA 90 bp | AGGTTGACTGTTCCAGCTCCATCCCTCATCTCTGCGTGCTGCTCATaGAATAGGGCAAGCACAAGGTTTCCCCTTCCTTTGCCTGGATCA | + |
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Preference number: 1 (lower is better) Translates to: RLTVPAPSLISACCS*NRASTRFPLPLPGS Trigger: TGATCCAGGCAAAGGAAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGATGGAGCTGGAACAGTCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR TCA 90 bp | TTGGGTTCCATTCAGGCATTTCTTGCTCCTCCTATAGGCCCTCTCTaGTCTCATGTCGCACCACTGGTCCTCAGGTTGACTGTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LGSIQAFLAPPIGPL*SHVAPLVLRLTVPA Trigger: AGCTGGAACAGTCAACCTGAGGACCAGTGGTGCGACATGAGATCAGAGAGGGCCTATAGGAGGAGCAAGAAATGCCTGAATGGAACCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR CCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTaGAGGTTGCTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: FRHSDNIHAFLHHVW*RLLTFDHRKNQCFG Trigger: CCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR CCA 90 bp | AACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTaGTGGAGGTTGCTGACGTTTGACCATAGGAAGAACCAGTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NFRHSDNIHAFLHHV*WRLLTFDHRKNQCF Trigger: AAAGCACTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR TCA 90 bp | ATATGCACACAAACACGTCTGAATGATGAGGAAAGCAGACTATGCTaGAATACAGTTATCACCTTACATTTGAATAAAACTGGAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ICTQTRLNDEESRLC*NTVITLHLNKTGRQ Trigger: CTGTCTTCCAGTTTTATTCAAATGTAAGGTGATAACTGTATTTCAGCATAGTCTGCTTTCCTCATCATTCAGACGTGTTTGTGTGCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR CCA 90 bp | GACATTCCGGGCATCACAGAGAGAGGCGTGGTCAGAGACCAAAGTGCAGGCGCACTTGGGAGGTACGGATaGGAGGGAGAATCTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DIPGITERGVVRDQSAGALGRYG*EGESLF Trigger: AAACAGAGATTCTCCCTCCCATCCGTACCTCCCAAG...TGCGCCTGCACTTTGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGGGTGCAGACATTCCGGGCATCACAGAGAGAGGCGTGGTCAGAGACCATCCTTCCTGCAGTTCTaGGGACTTCTTCACCATTTC | + |
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Preference number: 2 (lower is better) Translates to: RVGCRHSGHHRERRGQRPSFLQF*GLLHHF Trigger: GAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGA...TGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTCTGCACCCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCATCTCTGCGTGCTGCTCATGGAATAGGGCAAGCACAAGGTTTCCCCTTGGTCAGAGACCAAAGTaGAGGCGCACAGGAATACGA | + |
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Preference number: 2 (lower is better) Translates to: SLISACCSWNRASTRFPLGQRPK*RRTGIR Trigger: TCGTATTCCTGTGCGCCTGCACTTTGGTCTCTGACC...AAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGGTGCAGACATTCCGGGCATCACAGAGAGAGGCGTGGTCAGAGACCATCAACAAATCCTTCCTaGAGTTCTGAGGACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RVGCRHSGHHRERRGQRPSTNPS*SSEDFF Trigger: GAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGA...TGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTCTGCACCCCACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | GCCCCACCGATACAACTCCTAAGAGTCAAAGCCCAGAACAGGGACACTTGTGGATGTCCACATTGGCCTTaGAGTTCTAGGCTTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: APPIQLLRVKAQNRDTCGCPHWP*SSRLEG Trigger: ACCCTCAAGCCTAGAACTGCAAGGCCAATGTGGACA...TCCACAAGTGTCCCTGTTCTGGGCTTTGACTCTTAGGAGTTGTATCGGTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR CAA 90 bp | GCCTGCCGAGTACTGGGATTAAAGGCGTGCGCCACCACGCTCAGCTaGGATCTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ACRVLGLKACATTLS*DLYFNVILGYTVSL Trigger: CAAACTCACTGTATACCCAAGAATGACATTGAAATACAGATCCAAGCTGAGCGTGGTGGCGCACGCCTTTAATCCCAGTACTCGGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCATCTCTGCGTGCTGCTCATGGAATAGGGCAAGCACAAGGTTTCCCCTTTGTCTTACAAATACCTaGCCAGCCAATCACCCAATT | + |
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Preference number: 2 (lower is better) Translates to: SLISACCSWNRASTRFPLCLTNT*PANHPI Trigger: AATTGGGTGATTGGCTGGGCAGGTATTTGTAAGACA...AAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGGAAGAACCAGTGCTTTaGGGGAATTCCTGGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWEEPVL*GNSWAF Trigger: GAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTC...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGCATCCTCAGCCCATCACAGGACGTCTTTGAAGGCACACCTGCATATGCACGAAAGCAGACTATGCTaGAATACAGTTATCACCTTA | + |
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Preference number: 2 (lower is better) Translates to: SASSAHHRTSLKAHLHMHESRLC*NTVITL Trigger: TAAGGTGATAACTGTATTTCAGCATAGTCTGCTTTC...GTGCATATGCAGGTGTGCCTTCAAAGACGTCCTGTGATGGGCTGAGGATGCGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTCCCATAGATGACATCTaGAAACAAACTCATCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSPIDDI*KQTHQA Trigger: GGCTTGATGAGTTTGTTTGCAGATGTCATCTATGGG...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTTGGAGAAGAGGAATGTaGTCACAGTCTCAACAAATC | + |
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Preference number: 2 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSWRRGM*SQSQQI Trigger: GATTTGTTGAGACTGTGAGCACATTCCTCTTCTCCA...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR CAA 90 bp | AAAGGGCCTAGCTATACTGTCCACATTGGCCTTGCAGTTCTAGGCTaGAGGGTTTTCATTTTAGGCACCCAAGTAGCTAGGACTATAGGT | + |
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Preference number: 2 (lower is better) Translates to: KGPSYTVHIGLAVLG*RVFILGTQVARTIG Trigger: ACCTATAGTCCTAGCTACTTGGGTGCCTAAAATGAAAACCCTCAAGCCTAGAACTGCAAGGCCAATGTGGACAGTATAGCTAGGCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCCACCGATACAACTCCTAAGAGTCAAAGCCCAGAACAGGGACACTTGTGGATGGGCTGTATTAGTTTaGTTTTTCCTGCAAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: APPIQLLRVKAQNRDTCGWAVLV*FFLQTL Trigger: AAGAGTTTGCAGGAAAAATCAAACTAATACAGCCCA...TCCACAAGTGTCCCTGTTCTGGGCTTTGACTCTTAGGAGTTGTATCGGTGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAACCATTTCTTTGTCATaGTGGAGGTGTTATAGATTC | + |
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Preference number: 2 (lower is better) Translates to: QCFGGIPGPSRTFQERFGTISLS*WRCYRF Trigger: GAATCTATAACACCTCCATCATGACAAAGAAATGGT...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTCCTTCCTGCAGTTCTaGGGACTTCTTCACCATTTC | + |
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Preference number: 2 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGSFLQF*GLLHHF Trigger: GAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGA...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR GCA 90 bp | TATACTGTCCACATTGGCCTTGCAGTTCTAGGCTTGAGGGTTTTCATTTTAGGCCATAGGAAGAACCAGTaGTTTGGGGGAATTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: YTVHIGLAVLGLRVFILGHRKNQ*FGGIPG Trigger: CCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATG...GCCTAAAATGAAAACCCTCAAGCCTAGAACTGCAAGGCCAATGTGGACAGTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATCATAGGAAGAACCAGTaGTTTGGGGGAATTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHHRKNQ*FGGIPG Trigger: CCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATG...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR CAA 90 bp | GGTCTGGTAAAATCAGGCATCGCGAAACATGCCTTTAATGTGGACTaGGGAGGTACGGATGGGAGGGAGAATCTCTGTTTCTTTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: GLVKSGIAKHAFNVD*GGTDGRENLCFFVF Trigger: AAAAACAAAGAAACAGAGATTCTCCCTCCCATCCGTACCTCCCAAGTCCACATTAAAGGCATGTTTCGCGATGCCTGATTTTACCAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTGACGTTTGACCATAGGTCAACAAATCCTTCCTaGAGTTCTGAGGACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: IHAFLHHVWWRLLTFDHRSTNPS*SSEDFF Trigger: GAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGA...CCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTGACGTTTGACCATAGGTGGAGAAGAGGAATGTaGTCACAGTCTCAACAAATC | + |
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Preference number: 2 (lower is better) Translates to: IHAFLHHVWWRLLTFDHRWRRGM*SQSQQI Trigger: GATTTGTTGAGACTGTGAGCACATTCCTCTTCTCCA...CCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGATTCCAGGAGAGGTTTaGAGAAGAGGAATGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWIPGEV*RRGMCS Trigger: TGAGCACATTCCTCTTCTCCAAACCTCTCCTGGAAT...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | GTATACAGTGAGTTTGAGGCCAGCCTTGGCTACATGAGACCCTTTCTCAACAAATTCAGTCCCCATAGATaGCATCTGCAAACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: VYSEFEASLGYMRPFLNKFSPHR*HLQTNS Trigger: TGAGTTTGTTTGCAGATGTCATCTATGGGGACTGAA...TTTGTTGAGAAAGGGTCTCATGTAGCCAAGGCTGGCCTCAAACTCACTGTATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGGAGAAGAGGAATGTaGTCACAGTCTCAACAAATC | + |
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Preference number: 2 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGWRRGM*SQSQQI Trigger: GATTTGTTGAGACTGTGAGCACATTCCTCTTCTCCA...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR CCA 90 bp | TATACTGTCCACATTGGCCTTGCAGTTCTAGGCTTGAGGGTTTTCATTTTAGGCATTCCAGGAGAGGTTTaGAGAAGAGGAATGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YTVHIGLAVLGLRVFILGIPGEV*RRGMCS Trigger: TGAGCACATTCCTCTTCTCCAAACCTCTCCTGGAAT...GCCTAAAATGAAAACCCTCAAGCCTAGAACTGCAAGGCCAATGTGGACAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTCCCATAGATGACATCTaGAAACAAACTCATCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVPIDDI*KQTHQA Trigger: GGCTTGATGAGTTTGTTTGCAGATGTCATCTATGGG...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR GCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATCCCATAGATGACATCTaGAAACAAACTCATCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHPIDDI*KQTHQA Trigger: GGCTTGATGAGTTTGTTTGCAGATGTCATCTATGGG...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGTGGGCTGTATTAGTTTaGTTTTTCCTGCAAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLWAVLV*FFLQTL Trigger: AAGAGTTTGCAGGAAAAATCAAACTAATACAGCCCA...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGACCATTTCTTTGTCATaGTGGAGGTGTTATAGATTC | + |
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Preference number: 2 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWTISLS*WRCYRF Trigger: GAATCTATAACACCTCCATCATGACAAAGAAATGGT...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTTGGGCTGTATTAGTTTaGTTTTTCCTGCAAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVWAVLV*FFLQTL Trigger: AAGAGTTTGCAGGAAAAATCAAACTAATACAGCCCA...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCAACAAATCCTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATTTCAGTCCCCATAGATaGCATCTGCAAACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: SQQILPAVLRTSSPFLCHFSPHR*HLQTNS Trigger: TGAGTTTGTTTGCAGATGTCATCTATGGGGACTGAA...ATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| 3UTR CCA 72 bp | GGGGTGCAGACATTCCGGGCATCACAGAGAGAGGCGTaGTCAGAGACCAAAGTGCAGGCGCACAGGAATACG | + |
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Preference number: 3 (lower is better) Translates to: GVQTFRASQREA*SETKVQAHRNT Trigger: CGTATTCCTGTGCGCCTGCACTTTGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTCTGCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR GCA 72 bp | AGAACAGGGACACTTGTGGAGCTCTTTCCCGGGCACTaGGGAGTTGCTGTGGCAATGGGTGTGGGCGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: RTGTLVELFPGH*GVAVAMGVGVE Trigger: TTCTACGCCCACACCCATTGCCACAGCAACTCCGCAGTGCCCGGGAAAGAGCTCCACAAGTGTCCCTGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR TCA 72 bp | AATGCCCTTCCTGTGGACCCTCCAGACATGCATTCCTaGGGTCAGATAGCCTGGGCTGTGGACATTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: NALPVDPPDMHS*GQIAWAVDIPV Trigger: CACAGGAATGTCCACAGCCCAGGCTATCTGACCTCAGGAATGCATGTCTGGAGGGTCCACAGGAAGGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR TCA 72 bp | CTCTCTGATCTCATGTCGCACCACTGGTCCTCAGGTTaGCTGTTCCAGCTCCATCCCTCATCTCTGCGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LSDLMSHHWSSG*LFQLHPSSLRA Trigger: AGCACGCAGAGATGAGGGATGGAGCTGGAACAGTCAACCTGAGGACCAGTGGTGCGACATGAGATCAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR GCA 72 bp | AGGTTGACTGTTCCAGCTCCATCCCTCATCTCTGCGTaGTGCTCATGGAATAGGGCAAGCACAAGGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: RLTVPAPSLISA*CSWNRASTRFP Trigger: GGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGATGGAGCTGGAACAGTCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR TCA 72 bp | TGTGGCAATGGGTGTGGGCGTAGAAGCATCTGTGATTaGATGCCCTTCCTGTGGACCCTCCAGACATGCATT | + |
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Preference number: 3 (lower is better) Translates to: CGNGCGRRSICD*MPFLWTLQTCI Trigger: AATGCATGTCTGGAGGGTCCACAGGAAGGGCATTCAATCACAGATGCTTCTACGCCCACACCCATTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR GCA 72 bp | TTGACTGTTCCAGCTCCATCCCTCATCTCTGCGTGCTaGTCATGGAATAGGGCAAGCACAAGGTTTCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LTVPAPSLISAC*SWNRASTRFPL Trigger: AAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGATGGAGCTGGAACAGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| 3UTR-3UTR CAA 90 bp | GCCCCACCGATACAACTCCTAAGAGTCAAAGCCCAGAACAGGGACACTTGTGGAGGCAGGCAGCAGCTTTaGGGCTGTATTAGTTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: APPIQLLRVKAQNRDTCGGRQQL*GCISLI Trigger: AATCAAACTAATACAGCCCAAAAGCTGCTGCCTGCC...TCCACAAGTGTCCCTGTTCTGGGCTTTGACTCTTAGGAGTTGTATCGGTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTCATTCCAGGAGAGGTTaGGAGAAGAGGAATGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSHSRRG*EKRNVL Trigger: GAGCACATTCCTCTTCTCCAAACCTCTCCTGGAATG...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR TCA 72 bp | ATTCAGGCATTTCTTGCTCCTCCTATAGGCCCTCTCTaGTCTCATGTCGCACCACTGGTCCTCAGGTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: IQAFLAPPIGPL*SHVAPLVLRLT Trigger: AGTCAACCTGAGGACCAGTGGTGCGACATGAGATCAGAGAGGGCCTATAGGAGGAGCAAGAAATGCCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR GCA 72 bp | TGGAGGTTGCTGACGTTTGACCATAGGAAGAACCAGTaGTTTGGGGGAATTCCTGGGCCTTCTAGGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: WRLLTFDHRKNQ*FGGIPGPSRTF Trigger: GAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR GCA 72 bp | AAGCACAAGGTTTCCCCTTCCTTTGCCTGGATCACTTaGCCCACCGATACAACTCCTAAGAGTCAAAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KHKVSPSFAWIT*PTDTTPKSQSP Trigger: TGGGCTTTGACTCTTAGGAGTTGTATCGGTGGGGCAAGTGATCCAGGCAAAGGAAGGGGAAACCTTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR TCA 72 bp | TTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTaGCGTTTGACCATAGGAAGAACCAGTGCTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTLSSIMFGGGC*RLTIGRTSALG Trigger: CCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTGACGTTTGACCATAGGCATTCCAGGAGAGGTTaGGAGAAGAGGAATGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IHAFLHHVWWRLLTFDHRHSRRG*EKRNVL Trigger: GAGCACATTCCTCTTCTCCAAACCTCTCCTGGAATG...CCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR CCA 72 bp | AATCAGGCATCGCGAAACATGCCTTTAATGTGGACTTaGGAGGTACGGATGGGAGGGAGAATCTCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NQASRNMPLMWT*EVRMGGRISVS Trigger: AGAAACAGAGATTCTCCCTCCCATCCGTACCTCCCAAGTCCACATTAAAGGCATGTTTCGCGATGCCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGATTGGGCTGTATTAGTTaGATTTTTCCTGCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: QCFGGIPGPSRTFQERFGLGCIS*IFPANS Trigger: AGAGTTTGCAGGAAAAATCAAACTAATACAGCCCAA...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR CCA 72 bp | AGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTaGAGGTTGCTGACGTTTGACCATAGGAAGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SDNIHAFLHHVW*RLLTFDHRKNQ Trigger: CTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTTTGGGCTGTATTAGTTaGATTTTTCCTGCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSLGCIS*IFPANS Trigger: AGAGTTTGCAGGAAAAATCAAACTAATACAGCCCAA...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTGGCAGGCAGCAGCTTTaGGGCTGTATTAGTTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVGRQQL*GCISLI Trigger: AATCAAACTAATACAGCCCAAAAGCTGCTGCCTGCC...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATACAGTGAGTTTGAGGCCAGCCTTGGCTACATGAGACCCTTTCTCAACAAACTTGCAGTTCTAGGCTaGAGGGTTTTCATTTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VYSEFEASLGYMRPFLNKLAVLG*RVFILG Trigger: GCCTAAAATGAAAACCCTCAAGCCTAGAACTGCAAG...TTTGTTGAGAAAGGGTCTCATGTAGCCAAGGCTGGCCTCAAACTCACTGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR CCA 72 bp | CATAGTGACAACATTCACGCTTTCCTCCATCATGTTTaGTGGAGGTTGCTGACGTTTGACCATAGGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSDNIHAFLHHV*WRLLTFDHRKN Trigger: GTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR TCA 72 bp | TGTGCTCACAGTCTCAACAAATCCTTCCTGCAGTTCTaGGGACTTCTTCACCATTTCTTTGTCATGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CAHSLNKSFLQF*GLLHHFFVMME Trigger: CTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGAGACTGTGAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR GCA 72 bp | AAGAGGAATGTGCTCACAGTCTCAACAAATCCTTCCTaGAGTTCTGAGGACTTCTTCACCATTTCTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KRNVLTVSTNPS*SSEDFFTISLS Trigger: TGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGAGACTGTGAGCACATTCCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGTTGGGCTGTATTAGTTaGATTTTTCCTGCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLLGCIS*IFPANS Trigger: AGAGTTTGCAGGAAAAATCAAACTAATACAGCCCAA...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCCACAGTCCCTATTCAGATaGTTCTTAAAGGTACCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPNSDLLQGQSLLLTREPQSLFR*FLKVPF Trigger: AAAGGGTACCTTTAAGAACAATCTGAATAGGGACTG...TGGCTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| 3UTR CCA 72 bp | ATGTCTTACAAATACCTGCCCAGCCAATCACCCAATTaGGATGCGGTAATAGATGAGATGTCTAATTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: MSYKYLPSQSPN*DAVIDEMSNYR Trigger: CCTATAATTAGACATCTCATCTATTACCGCATCCCAATTGGGTGATTGGCTGGGCAGGTATTTGTAAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTGGTATGGGGGTGCGATaGGGGGCTGTGTGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSGMGVR*GAVWVE Trigger: CTCCACCCACACAGCCCCCCATCGCACCCCCATACC...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033513.10 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTCCGAATCGTAGGCGCTaGGGTCCCCACAGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSPNRRR*GPHRPQ Trigger: TTGTGGCCTGTGGGGACCTCAGCGCCTACGATTCGG...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGGTGCAGACATTCCGGGCATCACAGAGAGAGGCGTGGTCAGAGACCATATCTGTATCACACCTaGCAGTGGAGCCATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGCRHSGHHRERRGQRPYLYHT*QWSHSL Trigger: CAGGCTATGGCTCCACTGCCAGGTGTGATACAGATA...TGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTCTGCACCCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR CAA 72 bp | ACAACTCCTAAGAGTCAAAGCCCAGAACAGGGACACTaGTGGAGCTCTTTCCCGGGCACTGCGGAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPKSQSPEQGH*WSSFPGTAELL Trigger: CAGCAACTCCGCAGTGCCCGGGAAAGAGCTCCACAAGTGTCCCTGTTCTGGGCTTTGACTCTTAGGAGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATCTCTGCGTGCTGCTCATGGAATAGGGCAAGCACAAGGTTTCCCCTTTGGTCAGGTCTGGAATaGAGCCCTCAGGAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLISACCSWNRASTRFPLWSGLE*SPQEGH Trigger: ATGACCCTCCTGAGGGCTTCATTCCAGACCTGACCA...AAGGGGAAACCTTGTGCTTGCCCTATTCCATGAGCAGCACGCAGAGATGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAGCCAGCCATTCTCCTTaGCCAGGCGGTAGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QCFGGIPGPSRTFQERFGASHSP*PGGSRH Trigger: ATGTCTACTACCGCCTGGCCAAGGAGAATGGCTGGC...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTACCTACCGCATCCGCATCCTCAGCCCATCACAGGACGTCTTTGAAGGCACACCAGCCTTCAAAGTGCTaGATGATCTCCTTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTASASSAHHRTSLKAHQPSKC*MISLAV Trigger: CACTGCCAAGGAGATCATCCAGCACTTTGAAGGCTG...GTGTGCCTTCAAAGACGTCCTGTGATGGGCTGAGGATGCGGATGCGGTAGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTGGGTCTGGTCAGGTCTaGAATGAAGCCCTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSGSGQV*NEALRR Trigger: CCTCCTGAGGGCTTCATTCCAGACCTGACCAGACCC...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GTATACAGTGAGTTTGAGGCCAGCCTTGGCTACATGAGACCCTTTCTCAACAAAGGTATGGGGGTGCGATaGGGGGCTGTGTGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEFEASLGYMRPFLNKGMGVR*GAVWVE Trigger: CTCCACCCACACAGCCCCCCATCGCACCCCCATACC...TTTGTTGAGAAAGGGTCTCATGTAGCCAAGGCTGGCCTCAAACTCACTGTATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGATGGATAGCCAGAGGCTaGGGCAACTTGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QCFGGIPGPSRTFQERFGWIARG*GNLSTL Trigger: CAGTGTGGACAAGTTGCCCCAGCCTCTGGCTATCCA...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTCTCCCTCCCACACCCGCTTATACTGGTAGTGCTGGGCATACAATTCGGGTCTAGCAGGGTATaGATAGCCAGAGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQVSLPHPLILVVLGIQFGSSRV*IARGWG Trigger: GCCCCAGCCTCTGGCTATCCATACCCTGCTAGACCC...GAATTGTATGCCCAGCACTACCAGTATAAGCGGGTGTGGGAGGGAGACTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR GCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCCAGCTGCCTGGGGCTaGACACAAGTCAACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLPAAWG*TQVNRS Trigger: CGAGCGGTTGACTTGTGTGCAGCCCCAGGCAGCTGG...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTGCCAGCCATTCTCCTTaGCCAGGCGGTAGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSASHSP*PGGSRH Trigger: ATGTCTACTACCGCCTGGCCAAGGAGAATGGCTGGC...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GACATTCCGGGCATCACAGAGAGAGGCGTGGTCAGAGACCAAAGTGCAGGCGCATACTCATCCACATCATaGAGACCAGTGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DIPGITERGVVRDQSAGAYSSTS*RPVTSG Trigger: TCCTGATGTCACTGGTCTCCATGATGTGGATGAGTA...TGCGCCTGCACTTTGGTCTCTGACCACGCCTCTCTCTGTGATGCCCGGAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | GCGAAACATGCCTTTAATGTGGACTTGGGAGGTACGGATGGGAGGGAGAATCTCGCAGCTAGCAGAAGCTaGGCCTGCATGTACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKHAFNVDLGGTDGRENLAASRS*ACMYSS Trigger: GGATGAGTACATGCAGGCCCAGCTTCTGCTAGCTGC...GAGATTCTCCCTCCCATCCGTACCTCCCAAGTCCACATTAAAGGCATGTTTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTGCAGCTAGCAGAAGCTaGGCCTGCATGTACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSAASRS*ACMYSS Trigger: GGATGAGTACATGCAGGCCCAGCTTCTGCTAGCTGC...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCCAGGTATGGGGGTGCGATaGGGGGCTGTGTGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPNSDLLQGQSLLLTREPGMGVR*GAVWVE Trigger: CTCCACCCACACAGCCCCCCATCGCACCCCCATACC...TGGCTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR TCA 90 bp | CTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTGAGGCCAGCCTTGGCTCCGAATCGTAGGCGCTaGGGTCCCCACAGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFNVILGYTVSLRPALAPNRRR*GPHRPQ Trigger: TTGTGGCCTGTGGGGACCTCAGCGCCTACGATTCGG...AGCCAAGGCTGGCCTCAAACTCACTGTATACCCAAGAATGACATTGAAATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAACTTGTCCACACTGTTaGTGGAGCATTCTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCFGGIPGPSRTFQERFGTCPHC*WSILGG Trigger: TCCCCCAAGAATGCTCCATCAACAGTGTGGACAAGT...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTGAGGCCAGCCTTGGCTCCAGCTGCCTGGGGCTaGACACAAGTCAACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNVILGYTVSLRPALAPAAWG*TQVNRS Trigger: CGAGCGGTTGACTTGTGTGCAGCCCCAGGCAGCTGG...AGCCAAGGCTGGCCTCAAACTCACTGTATACCCAAGAATGACATTGAAATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR GCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATCCAGCTGCCTGGGGCTaGACACAAGTCAACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHPAAWG*TQVNRS Trigger: CGAGCGGTTGACTTGTGTGCAGCCCCAGGCAGCTGG...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAAGCAGAAGCTGGGCCTaGATGTACTCATCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCFGGIPGPSRTFQERFGSRSWA*MYSSTS Trigger: TGATGTGGATGAGTACATGCAGGCCCAGCTTCTGCT...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTCTCCCTCCCACACCCGCTTATACTGGTAGTGCTGGGCATACAATTCGCCAGCCATTCTCCTTaGCCAGGCGGTAGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KQVSLPHPLILVVLGIQFASHSP*PGGSRH Trigger: ATGTCTACTACCGCCTGGCCAAGGAGAATGGCTGGC...GAATTGTATGCCCAGCACTACCAGTATAAGCGGGTGTGGGAGGGAGACTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTCTCCCTCCCACACCCGCTTATACTGGTAGTGCTGGGCATACAATTCGGGGGAGGAGTTCCTTaGCCAGCTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQVSLPHPLILVVLGIQFGGGVP*PAVHSS Trigger: AGAAGAATGGACAGCTGGCCAAGGAACTCCTCCCCC...GAATTGTATGCCCAGCACTACCAGTATAAGCGGGTGTGGGAGGGAGACTTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTCTCCCTCCCACACCCGCTTATACTGGTAGTGCTGGGCATACAATTCTGGATAGCCAGAGGCTaGGGCAACTTGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KQVSLPHPLILVVLGIQFWIARG*GNLSTL Trigger: CAGTGTGGACAAGTTGCCCCAGCCTCTGGCTATCCA...GAATTGTATGCCCAGCACTACCAGTATAAGCGGGTGTGGGAGGGAGACTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGGGGTCTAGCAGGGTATaGATAGCCAGAGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWGSSRV*IARGWG Trigger: GCCCCAGCCTCTGGCTATCCATACCCTGCTAGACCC...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTTATCTGTATCACACCTaGCAGTGGAGCCATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSYLYHT*QWSHSL Trigger: CAGGCTATGGCTCCACTGCCAGGTGTGATACAGATA...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTGGGTCTAGCAGGGTATaGATAGCCAGAGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVGSSRV*IARGWG Trigger: GCCCCAGCCTCTGGCTATCCATACCCTGCTAGACCC...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCGCCACCACGCTCAGCTTGGATCTGTATTTCAATGTCATTCTTGGGTACTTCAAAGTGCTGGATaGTCTCCTTGGCAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVRHHAQLGSVFQCHSWVLQSAG*SPWQWK Trigger: TTTCCACTGCCAAGGAGATCATCCAGCACTTTGAAG...TACCCAAGAATGACATTGAAATACAGATCCAAGCTGAGCGTGGTGGCGCACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAAATTCCTCATCCAGTTaGAGGAGCTTGAAAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCFGGIPGPSRTFQERFGNSSSS*RSLKAL Trigger: AAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATT...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTGAGGCCAGCCTTGGCTGGGTCTGGTCAGGTCTaGAATGAAGCCCTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNVILGYTVSLRPALAGSGQV*NEALRR Trigger: CCTCCTGAGGGCTTCATTCCAGACCTGACCAGACCC...AGCCAAGGCTGGCCTCAAACTCACTGTATACCCAAGAATGACATTGAAATACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGGGTCTGGTCAGGTCTaGAATGAAGCCCTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHGSGQV*NEALRR Trigger: CCTCCTGAGGGCTTCATTCCAGACCTGACCAGACCC...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGGGGGGAGGAGTTCCTTaGCCAGCTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWGGGVP*PAVHSS Trigger: AGAAGAATGGACAGCTGGCCAAGGAACTCCTCCCCC...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATTGGTCAGGTCTGGAATaGAGCCCTCAGGAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHWSGLE*SPQEGH Trigger: ATGACCCTCCTGAGGGCTTCATTCCAGACCTGACCA...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGGGGCAGCCTTCAAAGTaGTGGATGATCTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWGQPSK*WMISLA Trigger: TGCCAAGGAGATCATCCAGCACTTTGAAGGCTGCCC...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTGGGCAGCCTTCAAAGTaGTGGATGATCTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGGQPSK*WMISLA Trigger: TGCCAAGGAGATCATCCAGCACTTTGAAGGCTGCCC...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTTACTCATCCACATCATaGAGACCAGTGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSYSSTS*RPVTSG Trigger: TCCTGATGTCACTGGTCTCCATGATGTGGATGAGTA...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTTGATGGAGCATTCTTaGGGGAGGAGTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGLMEHS*GRSSLA Trigger: GGCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAA...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGTGGATAGCCAGAGGCTaGGGCAACTTGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: WKPNSDLLQGQSLLLTREWIARG*GNLSTL Trigger: CAGTGTGGACAAGTTGCCCCAGCCTCTGGCTATCCA...CTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTGGGTCTAGCAGGGTATaGATAGCCAGAGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPAVPIQIVLKGTLYLNFGSSRV*IARGWG Trigger: GCCCCAGCCTCTGGCTATCCATACCCTGCTAGACCC...AAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| 3UTR CAA 72 bp | ATCCAACTATCAGGCTTTGTGTGTGTGCTAGTGAAATaGGAACCCAGGGCCTTATGCATACGAGGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQLSGFVCVLVK*EPRALCIRGKD Trigger: GTCCTTGCCTCGTATGCATAAGGCCCTGGGTTCCAATTTCACTAGCACACACACAAAGCCTGATAGTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| 3UTR CAA 72 bp | AAATCAGGCATCGCGAAACATGCCTTTAATGTGGACTaGGGAGGTACGGATGGGAGGGAGAATCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSGIAKHAFNVD*GGTDGRENLCF Trigger: GAAACAGAGATTCTCCCTCCCATCCGTACCTCCCAAGTCCACATTAAAGGCATGTTTCGCGATGCCTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTGACGTTTGACCATAGGCTTCAAAGTGCTGGATaGTCTCCTTGGCAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IHAFLHHVWWRLLTFDHRLQSAG*SPWQWK Trigger: TTTCCACTGCCAAGGAGATCATCCAGCACTTTGAAG...CCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGACTTGTCCACACTGTTaGTGGAGCATTCTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLTCPHC*WSILGG Trigger: TCCCCCAAGAATGCTCCATCAACAGTGTGGACAAGT...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTGAGGCCAGCCTTGGCTGGGCAGCCTTCAAAGTaGTGGATGATCTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYFNVILGYTVSLRPALAGQPSK*WMISLA Trigger: TGCCAAGGAGATCATCCAGCACTTTGAAGGCTGCCC...AGCCAAGGCTGGCCTCAAACTCACTGTATACCCAAGAATGACATTGAAATACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR GCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGAGCAGAAGCTGGGCCTaGATGTACTCATCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLSRSWA*MYSSTS Trigger: TGATGTGGATGAGTACATGCAGGCCCAGCTTCTGCT...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGCATTCTTCTTCAACCTaGAGGCCTCTTGGTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWHSSST*RPLGMG Trigger: CCCCATACCAAGAGGCCTGCAGGTTGAAGAAGAATG...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGTATCTGTATCACACCTaGCAGTGGAGCCATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWYLYHT*QWSHSL Trigger: CAGGCTATGGCTCCACTGCCAGGTGTGATACAGATA...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATTTGATGGAGCATTCTTaGGGGAGGAGTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHLMEHS*GRSSLA Trigger: GGCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAA...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | CCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTAGAAGGGGAAAACCGAATCGTAGGCGCTaGGGTCCCCACAGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PIQIVLKGTLYLNFRRGKPNRRR*GPHRPQ Trigger: TTGTGGCCTGTGGGGACCTCAGCGCCTACGATTCGG...TTTTCCCCTTCTAAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR TCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATACTTGTCCACACTGTTaGTGGAGCATTCTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHTCPHC*WSILGG Trigger: TCCCCCAAGAATGCTCCATCAACAGTGTGGACAAGT...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATCATTCTTCTTCAACCTaGAGGCCTCTTGGTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHHSSST*RPLGMG Trigger: CCCCATACCAAGAGGCCTGCAGGTTGAAGAAGAATG...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCATTCTTCTTCAACCTaGAGGCCTCTTGGTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WKPNSDLLQGQSLLLTREHSSST*RPLGMG Trigger: CCCCATACCAAGAGGCCTGCAGGTTGAAGAAGAATG...CTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATCAGCCTTCAAAGTGCTaGATGATCTCCTTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHQPSKC*MISLAV Trigger: CACTGCCAAGGAGATCATCCAGCACTTTGAAGGCTG...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GGCGTGCGCCACCACGCTCAGCTTGGATCTGTATTTCAATGTCATTCTTGGGTAGTGGGACCATCCAACTaGTTGAAATCTGTATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GVRHHAQLGSVFQCHSWVVGPSN*LKSVSY Trigger: ATATGATACAGATTTCAACCAGTTGGATGGTCCCAC...TACCCAAGAATGACATTGAAATACAGATCCAAGCTGAGCGTGGTGGCGCACGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTGGGGGAGGAGTTCCTTaGCCAGCTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPAVPIQIVLKGTLYLNFGGGVP*PAVHSS Trigger: AGAAGAATGGACAGCTGGCCAAGGAACTCCTCCCCC...AAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAACAAATCCTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATTGGATAGCCAGAGGCTaGGGCAACTTGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SQQILPAVLRTSSPFLCHWIARG*GNLSTL Trigger: CAGTGTGGACAAGTTGCCCCAGCCTCTGGCTATCCA...ATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR CAA 72 bp | AGCTATACTGTCCACATTGGCCTTGCAGTTCTAGGCTaGAGGGTTTTCATTTTAGGCACCCAAGTAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYTVHIGLAVLG*RVFILGTQVAR Trigger: CCTAGCTACTTGGGTGCCTAAAATGAAAACCCTCAAGCCTAGAACTGCAAGGCCAATGTGGACAGTATAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTCTTCAAAGTGCTGGATaGTCTCCTTGGCAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVLQSAG*SPWQWK Trigger: TTTCCACTGCCAAGGAGATCATCCAGCACTTTGAAG...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGGAAATCTGTATCATATaGGTGGTTCAGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRHSDNIHAFLHHVWWRLEICII*VVQQGS Trigger: AGACCCCTGCTGAACCACTCATATGATACAGATTTC...CAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR GCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTAATTCCTCATCCAGTTaGAGGAGCTTGAAAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGNSSSS*RSLKAL Trigger: AAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATT...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGGATCTGTATTTCAATGTCATTCTTGGGTATACAGTGAGTTTGAGGCCCATTCTTCTTCAACCTaGAGGCCTCTTGGTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGSVFQCHSWVYSEFEAHSSST*RPLGMG Trigger: CCCCATACCAAGAGGCCTGCAGGTTGAAGAAGAATG...GGCCTCAAACTCACTGTATACCCAAGAATGACATTGAAATACAGATCCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CCA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTGCAGCTAGCAGAAGCTaGGCCTGCATGTACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSAASRS*ACMYSS Trigger: GGATGAGTACATGCAGGCCCAGCTTCTGCTAGCTGC...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTTTGATGGAGCATTCTTaGGGGAGGAGTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPAVPIQIVLKGTLYLNFLMEHS*GRSSLA Trigger: GGCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAA...AAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTGTGGGACCATCCAACTaGTTGAAATCATATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGVGPSN*LKSYEW Trigger: CCACTCATATGATTTCAACCAGTTGGATGGTCCCAC...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| 3UTR CAA 72 bp | AACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTaGCTGACGTTTGACCATAGGAAGAACCAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIHAFLHHVWWR*LTFDHRKNQCF Trigger: AAAGCACTGGTTCTTCCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTACTTGTCCACACTGTTaGTGGAGCATTCTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPAVPIQIVLKGTLYLNFTCPHC*WSILGG Trigger: TCCCCCAAGAATGCTCCATCAACAGTGTGGACAAGT...AAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CCA 90 bp | CTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGACACCTTTGAAGAGTTaGAATTCCTCATCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNFRHSDNIHAFLHHVWWTPLKS*NSSSSC Trigger: GCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGT...CCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATTTGAAATCATATGAGTaGTTCAGCAGGGGTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHLKSYE*FSRGLV Trigger: GACCAGACCCCTGCTGAACCACTCATATGATTTCAA...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTGTGGGACCATCCAACTaGTTGAAATCATATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVVGPSN*LKSYEW Trigger: CCACTCATATGATTTCAACCAGTTGGATGGTCCCAC...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCCAGTGGGACCATCCAACTaGTTGAAATCATATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPNSDLLQGQSLLLTREPVGPSN*LKSYEW Trigger: CCACTCATATGATTTCAACCAGTTGGATGGTCCCAC...TGGCTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR GCA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTAGCAGAAGCTGGGCCTaGATGTACTCATCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSSRSWA*MYSSTS Trigger: TGATGTGGATGAGTACATGCAGGCCCAGCTTCTGCT...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGCTGAACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATACACCTTTGAAGAGTTaGAATTCCTCATCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKLNFRHSDNIHAFLHHTPLKS*NSSSSC Trigger: GCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGT...ATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGTTCAGCTTTAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTCAGCCTTCAAAGTGCTaGATGATCTCCTTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSQPSKC*MISLAV Trigger: CACTGCCAAGGAGATCATCCAGCACTTTGAAGGCTG...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTTACTCATCCACATCATaGAGACCAGTGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSYSSTS*RPVTSG Trigger: TCCTGATGTCACTGGTCTCCATGATGTGGATGAGTA...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTTTGAAATCATATGAGTaGTTCAGCAGGGGTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSLKSYE*FSRGLV Trigger: GACCAGACCCCTGCTGAACCACTCATATGATTTCAA...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGGCAAGGACCTACCTACCGCATCCGCATCCTCAGCCCATCACAGGACGTCCGGCCTCGGAATATCTaGGCCACGAAGCAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRQGPTYRIRILSPSQDVRPRNI*ATKQPP Trigger: AGGGGGCTGCTTCGTGGCCAAGATATTCCGAGGCCG...GACGTCCTGTGATGGGCTGAGGATGCGGATGCGGTAGGTAGGTCCTTGCCTCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS TCA 90 bp | GGGCAGCCTTCAAAGTGCTGGATGATCTCCTTGGCAGTGGAAAGCTaGGTGATGTCGCCCTGTATCTGTATCACACCTGGCAGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQPSKCWMISLAVES*VMSPCICITPGSGA Trigger: GGCTCCACTGCCAGGTGTGATACAGATACAGGGCGACATCACTCAGCTTTCCACTGCCAAGGAGATCATCCAGCACTTTGAAGGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS TCA 90 bp | CCTCGGAATATCTTGGCCACGAAGCAGCCCCCTAGCTTCAAGACATaGGTAGCGATGTTGAGAGCAGCTAGCAGAAGCTGGGCCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PRNILATKQPPSFKT*VAMLRAASRSWACM Trigger: CATGCAGGCCCAGCTTCTGCTAGCTGCTCTCAACATCGCTACTCATGTCTTGAAGCTAGGGGGCTGCTTCGTGGCCAAGATATTCCGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS GCA 90 bp | ACCGCTCGCTTCACACCTTTGAAGAGTTGGAATTCCTCATCCAGTTaGAGGAGCTTGAAAGCGCTTCGGGCCCGCCAGCCATTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TARFTPLKSWNSSSS*RSLKALRARQPFSL Trigger: CAAGGAGAATGGCTGGCGGGCCCGAAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS CCA 90 bp | GTCCATTCTTCTTCAACCTGCAGGCCTCTTGGTATGGGGGTGCGATaGGGGGCTGTGTGGGTGGAGTATATTTGTACTCAGAGCCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VHSSSTCRPLGMGVR*GAVWVEYICTQSHR Trigger: ACGGTGGCTCTGAGTACAAATATACTCCACCCACACAGCCCCCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTGAAGAAGAATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115595.8 ENSMUST00000149063.2 |
||
| CDS-3UTR CAA 90 bp | CTGACGTTTGACCATAGGAAGAACCAGTGCTTTGGGGGAATTCCTGGGCCTTCTGAGTTCCGGCTGCTCTaGGGCTTAGCGCAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTFDHRKNQCFGGIPGPSEFRLL*GLAQST Trigger: TGTGCTCTGCGCTAAGCCCAAGAGCAGCCGGAACTC...AGAAGGCCCAGGAATTCCCCCAAAGCACTGGTTCTTCCTATGGTCAAACGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAAGAGGCTGGGGCAACTaGTCCACACTGTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCFGGIPGPSRTFQERFGRGWGN*STLLME Trigger: CTCCATCAACAGTGTGGACAAGTTGCCCCAGCCTCT...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS TCA 90 bp | CTGTATCATATGAGTGGTTCAGCAGGGGTCTGGTCAGGTCTGGAATaGAGCCCTCAGGAGGGTCATAACCCTGACACACAGCAAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYHMSGSAGVWSGLE*SPQEGHNPDTQQRP Trigger: AGGCCTTTGCTGTGTGTCAGGGTTATGACCCTCCTGAGGGCTTCATTCCAGACCTGACCAGACCCCTGCTGAACCACTCATATGATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS CCA 90 bp | CCACAGGCCACAAAGGGCACAATAACACGGGTGGGACCATCCAACTaGTTGAAATCATATGAGTGGTTCAGCAGGGGTCTGGTCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQATKGTITRVGPSN*LKSYEWFSRGLVRS Trigger: AGACCTGACCAGACCCCTGCTGAACCACTCATATGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGTGGCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | GTATACAGTGAGTTTGAGGCCAGCCTTGGCTACATGAGACCCTTTCTCAACAAACAACCTGCAGGCCTCTaGGTATGGGGGTGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VYSEFEASLGYMRPFLNKQPAGL*VWGCDG Trigger: CCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTG...TTTGTTGAGAAAGGGTCTCATGTAGCCAAGGCTGGCCTCAAACTCACTGTATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CAA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTCAACCTGCAGGCCTCTaGGTATGGGGGTGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGQPAGL*VWGCDG Trigger: CCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTG...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAGAGCCAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACCAACCTGCAGGCCTCTaGGTATGGGGGTGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LESQPAVPIQIVLKGTLYQPAGL*VWGCDG Trigger: CCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTG...GTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTGGCTCTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS CCA 90 bp | CCACAGGCCACAAAGGGCACAATAACACGGGTGGGACCATCCAACTaGTTGAAATCTGTATCATATGAGTGGTTCAGCAGGGGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQATKGTITRVGPSN*LKSVSYEWFSRGLV Trigger: GACCAGACCCCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGTGGCCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CAA 90 bp | GTATACAGTGAGTTTGAGGCCAGCCTTGGCTACATGAGACCCTTTCTCAACAAAGAGTTCCGGCTGCTCTaGGGCTTAGCGCAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VYSEFEASLGYMRPFLNKEFRLL*GLAQST Trigger: TGTGCTCTGCGCTAAGCCCAAGAGCAGCCGGAACTC...TTTGTTGAGAAAGGGTCTCATGTAGCCAAGGCTGGCCTCAAACTCACTGTATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CAA 90 bp | GGCGTGCGCCACCACGCTCAGCTTGGATCTGTATTTCAATGTCATTCTTGGGTAGTGGGTGGAGTATATTaGTACTCAGAGCCACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVRHHAQLGSVFQCHSWVVGGVY*YSEPPS Trigger: AGACGGTGGCTCTGAGTACAAATATACTCCACCCAC...TACCCAAGAATGACATTGAAATACAGATCCAAGCTGAGCGTGGTGGCGCACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTTTGGGGGAATTCCTGGGCCTTCTAGGACATTCCAGGAGAGGTTTGGAGGACCATCCAACTGGTaGAAATCATATGAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QCFGGIPGPSRTFQERFGGPSNW*KSYEWF Trigger: GAACCACTCATATGATTTCAACCAGTTGGATGGTCC...TCCAAACCTCTCCTGGAATGTCCTAGAAGGCCCAGGAATTCCCCCAAAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTCGGCCTCGGAATATCTaGGCCACGAAGCAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSRPRNI*ATKQPP Trigger: AGGGGGCTGCTTCGTGGCCAAGATATTCCGAGGCCG...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTCAACCTGCAGGCCTCTaGGTATGGGGGTGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSQPAGL*VWGCDG Trigger: CCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTG...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTGTTGATGGAGCATTCTaGGGGGAGGAGTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVVDGAF*GEEFLG Trigger: GCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAAC...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCCAAGAGGCTGGGGCAACTaGTCCACACTGTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPNSDLLQGQSLLLTREPRGWGN*STLLME Trigger: CTCCATCAACAGTGTGGACAAGTTGCCCCAGCCTCT...TGGCTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CAA 90 bp | ATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTTGCTGACGTTTGACCATAGGGCTCGCTTCACACCTTaGAAGAGTTGGAATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IHAFLHHVWWRLLTFDHRARFTP*KSWNSS Trigger: TGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGC...CCTATGGTCAAACGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTGAGTTCCGGCTGCTCTaGGGCTTAGCGCAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSEFRLL*GLAQST Trigger: TGTGCTCTGCGCTAAGCCCAAGAGCAGCCGGAACTC...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAGAGCCAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACGTGGGTGGAGTATATTaGTACTCAGAGCCACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LESQPAVPIQIVLKGTLYVGGVY*YSEPPS Trigger: AGACGGTGGCTCTGAGTACAAATATACTCCACCCAC...GTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTGGCTCTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTGCTCGCTTCACACCTTaGAAGAGTTGGAATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGARFTP*KSWNSS Trigger: TGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGC...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTGTGGGTGGAGTATATTaGTACTCAGAGCCACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAVLRTSSPFLCHDGGVVGGVY*YSEPPS Trigger: AGACGGTGGCTCTGAGTACAAATATACTCCACCCAC...AACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033513.10 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCAGTCCCTATTCAGATTGTTCTTAAAGGTACCCTTTACTTGAACTTTGTTGATGGAGCATTCTaGGGGGAGGAGTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPAVPIQIVLKGTLYLNFVDGAF*GEEFLG Trigger: GCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAAC...AAAGTTCAAGTAAAGGGTACCTTTAAGAACAATCTGAATAGGGACTGCAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTTCTTCACCATTTCTTTGTCATGATGGAGGTGTTATAGATTCTCACTCTAGAGGCTGGGGCAACTaGTCCACACTGTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTSSPFLCHDGGVIDSHSRGWGN*STLLME Trigger: CTCCATCAACAGTGTGGACAAGTTGCCCCAGCCTCT...AGAGTGAGAATCTATAACACCTCCATCATGACAAAGAAATGGTGAAGAAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCGTCATAGTGACAACATTCACGCTTTCCTCCATCATGTTTGGTGGAGGTGGACCATCCAACTGGTaGAAATCATATGAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSVIVTTFTLSSIMFGGGGPSNW*KSYEWF Trigger: GAACCACTCATATGATTTCAACCAGTTGGATGGTCC...ACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCACTATGACGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAAACTCAGATCTTCTGCAAGGGCAATCCTTGCTCTTAACTAGAGAGCCAGGACCATCCAACTGGTaGAAATCATATGAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPNSDLLQGQSLLLTREPGPSNW*KSYEWF Trigger: GAACCACTCATATGATTTCAACCAGTTGGATGGTCC...TGGCTCTCTAGTTAAGAGCAAGGATTGCCCTTGCAGAAGATCTGAGTTTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149063.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAACAAATCCTTCCTGCAGTTCTGAGGACTTCTTCACCATTTCTTTGTCATGCTCGCTTCACACCTTaGAAGAGTTGGAATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQQILPAVLRTSSPFLCHARFTP*KSWNSS Trigger: TGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGC...ATGACAAAGAAATGGTGAAGAAGTCCTCAGAACTGCAGGAAGGATTTGTTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS TCA 72 bp | AGTGGAGCCATAGCCTGTAAGTCCACGGCCACCACCTaGCCAGAACCCTGGCCCCCAACCTTCTGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGAIACKSTATT*PEPWPPTFWLS Trigger: GCTGAGCCAGAAGGTTGGGGGCCAGGGTTCTGGTCAGGTGGTGGCCGTGGACTTACAGGCTATGGCTCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS CAA 90 bp | TTCACACCTTTGAAGAGTTGGAATTCCTCATCCAGTTGCAGGAGCTaGAAAGCGCTTCGGGCCCGCCAGCCATTCTCCTTGGCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FTPLKSWNSSSSCRS*KALRARQPFSLARR Trigger: CCGCCTGGCCAAGGAGAATGGCTGGCGGGCCCGAAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS CCA 72 bp | AGCAGAAGCTGGGCCTGCATGTACTCATCCACATCATaGAGACCAGTGACATCAGGAGCCCCGTCACACACT | + |
|
Preference number: 6 (lower is better) Translates to: SRSWACMYSSTS*RPVTSGAPSHT Trigger: AGTGTGTGACGGGGCTCCTGATGTCACTGGTCTCCATGATGTGGATGAGTACATGCAGGCCCAGCTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS CCA 72 bp | TCTTCAACCTGCAGGCCTCTTGGTATGGGGGTGCGATaGGGGGCTGTGTGGGTGGAGTATATTTGTACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSTCRPLGMGVR*GAVWVEYICTQ Trigger: CTGAGTACAAATATACTCCACCCACACAGCCCCCCATCGCACCCCCATACCAAGAGGCCTGCAGGTTGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115595.8 ENSMUST00000149063.2 |
||
| CDS CAA 90 bp | TGGGGCTGCACACAAGTCAACCGCTCGCTTCACACCTTTGAAGAGTaGGAATTCCTCATCCAGTTGCAGGAGCTTGAAAGCGCTTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGCTQVNRSLHTFEE*EFLIQLQELESASG Trigger: GCCCGAAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGCGGTTGACTTGTGTGCAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
||
| CDS CAA 72 bp | TTGAAGAGTTGGAATTCCTCATCCAGTTGCAGGAGCTaGAAAGCGCTTCGGGCCCGCCAGCCATTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LKSWNSSSSCRS*KALRARQPFSL Trigger: CAAGGAGAATGGCTGGCGGGCCCGAAGCGCTTTCAAGCTCCTGCAACTGGATGAGGAATTCCAACTCTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CAA 90 bp | CAGGCCACAAAGGGCACAATAACACGGGTGGGACCATCCAACTGGTaGAAATCATATGAGTGGTTCAGCAGGGGTCTGGTCAGGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QATKGTITRVGPSNW*KSYEWFSRGLVRSG Trigger: TCCAGACCTGACCAGACCCCTGCTGAACCACTCATATGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS GCA 72 bp | GTAGCGATGTTGAGAGCAGCTAGCAGAAGCTGGGCCTaGATGTACTCATCCACATCATGGAGACCAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: VAMLRAASRSWA*MYSSTSWRPVT Trigger: TGTCACTGGTCTCCATGATGTGGATGAGTACATGCAGGCCCAGCTTCTGCTAGCTGCTCTCAACATCGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CCA 72 bp | CGGGTGGGACCATCCAACTGGTTGAAATCATATGAGTaGTTCAGCAGGGGTCTGGTCAGGTCTGGAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RVGPSNWLKSYE*FSRGLVRSGMK Trigger: CTTCATTCCAGACCTGACCAGACCCCTGCTGAACCACTCATATGATTTCAACCAGTTGGATGGTCCCACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CAA 72 bp | ACAGCAAAGGCCTCAATGCTAGAGTTCCGGCTGCTCTaGGGCTTAGCGCAGAGCACACTGGAGAAGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: TAKASMLEFRLL*GLAQSTLEKKI Trigger: TATCTTCTTCTCCAGTGTGCTCTGCGCTAAGCCCAAGAGCAGCCGGAACTCTAGCATTGAGGCCTTTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CAA 90 bp | CAGGCCACAAAGGGCACAATAACACGGGTGGGACCATCCAACTGGTaGAAATCTGTATCATATGAGTGGTTCAGCAGGGGTCTGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QATKGTITRVGPSNW*KSVSYEWFSRGLVR Trigger: CCTGACCAGACCCCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| CDS CAA 72 bp | AAGGGCACAATAACACGGGTGGGACCATCCAACTGGTaGAAATCATATGAGTGGTTCAGCAGGGGTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: KGTITRVGPSNW*KSYEWFSRGLV Trigger: GACCAGACCCCTGCTGAACCACTCATATGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS TCA 72 bp | GGTGGGACCATCCAACTGGTTGAAATCTGTATCATATaGGTGGTTCAGCAGGGGTCTGGTCAGGTCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GGTIQLVEICII*VVQQGSGQVWN Trigger: ATTCCAGACCTGACCAGACCCCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| CDS CCA 72 bp | CACAAGTCAACCGCTCGCTTCACACCTTTGAAGAGTTaGAATTCCTCATCCAGTTGCAGGAGCTTGAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: HKSTARFTPLKS*NSSSSCRSLKA Trigger: CGCTTTCAAGCTCCTGCAACTGGATGAGGAATTCCAACTCTTCAAAGGTGTGAAGCGAGCGGTTGACTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033513.10 ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CCA 72 bp | ACAAAGGGCACAATAACACGGGTGGGACCATCCAACTaGTTGAAATCATATGAGTGGTTCAGCAGGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TKGTITRVGPSN*LKSYEWFSRGL Trigger: CAGACCCCTGCTGAACCACTCATATGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115594.8 ENSMUST00000115595.8 |
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| CDS CCA 72 bp | GGACCATCCAACTGGTTGAAATCTGTATCATATGAGTaGTTCAGCAGGGGTCTGGTCAGGTCTGGAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GPSNWLKSVSYE*FSRGLVRSGMK Trigger: CTTCATTCCAGACCTGACCAGACCCCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| CDS CAA 72 bp | AAGGGCACAATAACACGGGTGGGACCATCCAACTGGTaGAAATCTGTATCATATGAGTGGTTCAGCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: KGTITRVGPSNW*KSVSYEWFSRG Trigger: ACCCCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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| CDS CCA 72 bp | ACAAAGGGCACAATAACACGGGTGGGACCATCCAACTaGTTGAAATCTGTATCATATGAGTGGTTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKGTITRVGPSN*LKSVSYEWFSR Trigger: CCTGCTGAACCACTCATATGATACAGATTTCAACCAGTTGGATGGTCCCACCCGTGTTATTGTGCCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033513.10 |
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