Pregenerated sensors for FTCD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001155Ensembl transcript IDs: ENSMUST00000001183.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTACTCCGTTGCATCTTCTaGTCCTGCATAGACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PETMDNRGYQDTTTNQALLRCIF*SCIDSC Trigger: ACAGCTGTCTATGCAGGATCAGAAGATGCAACGGAG...TAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCCCTGTCTCAGCCCCTCCTaGAGAGCGCATGCACGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LCIEPQPGPDGVMADSSPCLSPS*RAHARL Trigger: CAGGCGTGCATGCGCTCTGCAGGAGGGGCTGAGACA...GGGGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCCAGTGGCACAGCGACTaGCTGTCTCAGCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SCALSPNLALMVSWLTLPQWHSD*LSQPLL Trigger: CAGGAGGGGCTGAGACAGGCAGTCGCTGTGCCACTG...GGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCGACAGGTTCCCACAGTaGGCCAGCTCCTGCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SCALSPNLALMVSWLTLPDRFPQ*ASSCSA Trigger: AGCGCTGCAGGAGCTGGCCCACTGTGGGAACCTGTC...GGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | AGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCCCCTCCGTTCCCACTCGGCCTGTTTaGGCTTCTCAGGCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RIPPPIRPYHTLPQTPSVPTRPV*ASQAGP Trigger: AGGCCCTGCCTGAGAAGCTCAAACAGGCCGAGTGGG...AACGGAGGGGGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGGGAGATTCAGCTCCTaGGCCTCTCTGCGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ILHRQLCIEPQPGPDGVMGRFSS*ASLRAS Trigger: GGAGGCCCGCAGAGAGGCTCAGGAGCTGAATCTCCC...CATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCCCCTGTGTGCAGAGCTGTaGCCTCAAAGTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LCIEPQPGPDGVMADSSPLCAEL*PQSPGG Trigger: ACCTCCTGGACTTTGAGGTCACAGCTCTGCACACAG...GGGGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CCGTTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCTACAGAACCTCCTCCTaGGGCAGCAGAGCGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHLLILHRQLCIEPQPGYRTSS*GSRAGS Trigger: GGAGCCCGCTCTGCTGCCCCAGGAGGAGGTTCTGTA...GCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTATCAGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCCAACAGCACACAGCCTaGGGTCTGGGAGATGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGIRIPPPIRPYHTLPQTQQHTA*GLGDGS Trigger: CGAGCCATCTCCCAGACCCCAGGCTGTGTGCTGTTG...GGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCTGATACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | TTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCCCTAGCGCTGGCCATAGCTaGGACACAGTCTCGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LHLLILHRQLCIEPQPGPSAGHS*DTVSAS Trigger: ACTGGCCGAGACTGTGTCCCAGCTATGGCCAGCGCT...AGGGCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTATCAGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCAGGTTTGTGGACACCTaGGCCAGGTTCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGIRIPPPIRPYHTLPQTRFVDT*ARFFSS Trigger: GGAAGAGAAGAACCTGGCTCAGGTGTCCACAAACCT...GGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCTGATACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | CCTCCGTTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTAACAAAACCGCGCAGTaGGGTGTCCAACAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLHLLILHRQLCIEPQPNKTAQ*GVQQAL Trigger: CAGAGCCTGTTGGACACCTCACTGCGCGGTTTTGTT...AGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAACGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | TTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCCCTGGGTGCTCACCCTTGTaGTTGCTCATGTCGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: LHLLILHRQLCIEPQPGPGCSPL*LLMSMS Trigger: GCTCATCGACATGAGCAAGCACAAGGGTGAGCACCC...AGGGCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | TGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTACCATACCCTACATAGAAGCCAGGGCTaGACCCAGAGCTGCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: WITEGIRIPPPIRPYHTLHRSQG*TQSCYR Trigger: GCGGTAGCAGCTCTGGGTGCAGCCCTGGCTTCTATG...TAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATTCCAGCCCGGATGGCTaGCAGGGTCTGACGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: QARLGPLKIGKEYWKLDHSSPDG*QGLTTG Trigger: CCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGA...ATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTATTCAGACGTCCAGGCTaGTCTTTCCCTCGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PETMDNRGYQDTTTNQALFRRPG*SFPRPC Trigger: GCAGGGCCGAGGGAAAGACCAGCCTGGACGTCTGAA...TAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTACTGCGAGCCCACCACTaGGAGATTCAGCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PETMDNRGYQDTTTNQALLRAHH*EIQLLS Trigger: GCTCAGGAGCTGAATCTCCCAGTGGTGGGCTCGCAG...TAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | TTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCCCTATTGTGGAATCCAAGTaGTCAAACTGGCGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLLILHRQLCIEPQPGPIVESK*SNWRRP Trigger: TGGCCGGCGCCAGTTTGATCACTTGGATTCCACAAT...AGGGCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATCAGCTGGGCAGAGGCTaGGTGGAAGGGTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QARLGPLKIGKEYWKLDHQLGRG*VEGWDQ Trigger: CTGATCCCACCCTTCCACGCAGCCTCTGCCCAGCTG...ATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | GTTCAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCCGCCCCTCACCGGGATaGAGGGACACACATCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VQNLPETMDNRGYQDTTTRPSPG*RDTHPE Trigger: CTCTGGATGTGTGTCCCTTCATCCCGGTGAGGGGCG...GGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATGCGCAGCCTGAGTCTTaGCTTCCTGCAGAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QARLGPLKIGKEYWKLDHAQPES*LPAEGW Trigger: CCAGCCTTCTGCAGGAAGCCAAGACTCAGGCTGCGC...ATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTACTGGTTGTTCCCCTCTaGGAAGTTGGGGACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PETMDNRGYQDTTTNQALLVVPL*EVGDTF Trigger: GAATGTGTCCCCAACTTCTCAGAGGGGAACAACCAG...TAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATTCACAGCCGCTGCCCAAATaGCTTGGCACAGAGCACACA | + |
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Preference number: 4 (lower is better) Translates to: ARLGPLKIGKEYWKLDHSQPLPK*LGTEHT Trigger: TGTGTGCTCTGTGCCAAGGCATTTGGGCAGCGGCTG...TGAATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATTCACTGGAGGCAATACGGTGGGCCTaGTCCTTGGTGCTTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGPLKIGKEYWKLDHSLEAIRWA*SLVLSR Trigger: CCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGC...CTCCAGTGAATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CCTCCGTTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTTCCTCAAACACTGTGTaGAGAGCTGTGACCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PPLHLLILHRQLCIEPQPSSNTV*RAVTSK Trigger: CTTTGAGGTCACAGCTCTGCACACAGTGTTTGAGGA...AGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAACGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTAAGTCCAGGAGGTTTGTaGACACCTGAGCCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PETMDNRGYQDTTTNQALSPGGL*TPEPGS Trigger: AGAACCTGGCTCAGGTGTCCACAAACCTCCTGGACT...TAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | GTTCAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCCAGAGCTGCTACCGCTaGTGCTACAGAACCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQNLPETMDNRGYQDTTTQSCYR*CYRTSS Trigger: GGAGGAGGTTCTGTAGCAGCAGCGGTAGCAGCTCTG...GGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | AGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCCCCTCCGTTACCATAGAGATACACTaGTACATTAAGTTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RIPPPIRPYHTLPQTPSVTIEIH*YIKFLC Trigger: GCAGAGGAACTTAATGTACCAGTGTATCTCTATGGT...AACGGAGGGGGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | AGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCCCCTCCGTTAGGCTGGAGATTCGATaGTGTGTCTTCTCTTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: RIPPPIRPYHTLPQTPSVRLEIR*CVFSLN Trigger: ATTTAAAGAGAAGACACACCATCGAATCTCCAGCCT...AACGGAGGGGGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATTCTTTCCCTCGGCCCTaGTCCCGCAGGTTAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QNLPETMDNRGYQDTTTNSFPRP*SRRLRA Trigger: TGCTCTTAACCTGCGGGAGCAGGGCCGAGGGAAAGA...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATGCTGCCCAAATGCCTTaGCACAGAGCACACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: QARLGPLKIGKEYWKLDHAAQMP*HRAHTL Trigger: AAGAGTGTGTGCTCTGTGCCAAGGCATTTGGGCAGC...ATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCTCCAAGGCTTTGGCTaGCACCTGCAGGTCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QNLPETMDNRGYQDTTTNLQGFG*HLQVRQ Trigger: TTGTCTGACCTGCAGGTGGCAGCCAAAGCCTTGGAG...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATTACCAACCGATGCCCTaGACCTTTTTCAGACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QARLGPLKIGKEYWKLDHYQPMP*TFFRRP Trigger: TGGACGTCTGAAAAAGGTCCAGGGCATCGGTTGGTA...ATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATACCAATGAAGTCAGCTaGGCAGAGGCTGCGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QNLPETMDNRGYQDTTTNTNEVS*AEAAWK Trigger: CTTCCACGCAGCCTCTGCCCAGCTGACTTCATTGGT...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CCA 90 bp | GTTCAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCCTTCAGGCGTGTTCTTaGGCAGCTTTATTGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VQNLPETMDNRGYQDTTTLQACS*AALLPP Trigger: TGGAGGCAATAAAGCTGCCCAAGAACACGCCTGAAG...GGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATCTTGGGCAGCTTTATTaGCTCCAAACAGGCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: QNLPETMDNRGYQDTTTNLGQLY*LQTGSK Trigger: TTTGCTGCCTGTTTGGAGGCAATAAAGCTGCCCAAG...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | GCCCACCATAGAAGCCAGGGCTGCACCCAGAGCTGCTACCGCTGCTaGTACAGAACCTCCTCCTGGGGCAGCAGAGCGGGCTCCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: AHHRSQGCTQSCYRC*YRTSSWGSRAGSHL Trigger: GAGGTGGGAGCCCGCTCTGCTGCCCCAGGAGGAGGTTCTGTAGCAGCAGCGGTAGCAGCTCTGGGTGCAGCCCTGGCTTCTATGGTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 90 bp | GAGCGCCCATTCGAGGGTGCTCACCCTTGTGCTTGCTCATGTCGATaGGCTGTGAGGCCGTACGCGCAGCATGGAGGGCCCCCTCTACGA | + |
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Preference number: 5 (lower is better) Translates to: ERPFEGAHPCACSCR*AVRPYAQHGGPPLR Trigger: TCGTAGAGGGGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCACCCTCGAATGGGCGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | GACAGGTTCCCACAGTGGGCCAGCTCCTGCAGCGCTGGCCATAGCTaGGACACAGTCTCGGCCAGTTTCAGTGGCACAGCGACTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: DRFPQWASSCSAGHS*DTVSASFSGTATAC Trigger: ACAGGCAGTCGCTGTGCCACTGAAACTGGCCGAGACTGTGTCCCAGCTATGGCCAGCGCTGCAGGAGCTGGCCCACTGTGGGAACCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 90 bp | TGCCTCCAAACAGGCAGCAAACGCCCGGGCATCAGCATCCACCAATaGAGTCAGCTGGGCAGAGGCTGCGTGGAAGGGTGGGATCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: CLQTGSKRPGISIHQ*SQLGRGCVEGWDQA Trigger: CGCCTGATCCCACCCTTCCACGCAGCCTCTGCCCAGCTGACTTCATTGGTGGATGCTGATGCCCGGGCGTTTGCTGCCTGTTTGGAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | GCGGTTGGTGGAGGGTCCGGCATCGACGTCCAACAGCACACAGCCTaGGGTCTGGGAGATGGCTCGAGAGATGGCATCAATCACCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AVGGGSGIDVQQHTA*GLGDGSRDGINHLL Trigger: CAGGAGGTGATTGATGCCATCTCTCGAGCCATCTCCCAGACCCCAGGCTGTGTGCTGTTGGACGTCGATGCCGGACCCTCCACCAACCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | CGACACACTCTGGCTGCCCCACGAAAGTGTAGACAGTGCGGTTGGTaGAGGGTCCGGCATCGACGTCCAACAGCACACAGCCTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RHTLAAPRKCRQCGW*RVRHRRPTAHSLGS Trigger: AGACCCCAGGCTGTGTGCTGTTGGACGTCGATGCCGGACCCTCCACCAACCGCACTGTCTACACTTTCGTGGGGCAGCCAGAGTGTGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 90 bp | CATTCGAGGGTGCTCACCCTTGTGCTTGCTCATGTCGATGAGCTGTaGGGCCGTACGCGCAGCATGGAGGGCCCCCTCTACGACACACTC | + |
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Preference number: 5 (lower is better) Translates to: HSRVLTLVLAHVDEL*GRTRSMEGPLYDTL Trigger: GAGTGTGTCGTAGAGGGGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCACCCTCGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | TCGGCCAGTTTCAGTGGCACAGCGACTGCCTGTCTCAGCCCCTCCTaGAGAGCGCATGCACGCCTGTCTCTCTCTTCAGGCGTGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SASFSGTATACLSPS*RAHARLSLSSGVFL Trigger: CAAGAACACGCCTGAAGAGAGAGACAGGCGTGCATGCGCTCTGCAGGAGGGGCTGAGACAGGCAGTCGCTGTGCCACTGAAACTGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | TGCAGGTCAGACAAGCAGGACAGGTTCCCACAGTGGGCCAGCTCCTaGAGCGCTGGCCATAGCTGGGACACAGTCTCGGCCAGTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: CRSDKQDRFPQWASS*SAGHSWDTVSASFS Trigger: ACTGAAACTGGCCGAGACTGTGTCCCAGCTATGGCCAGCGCTGCAGGAGCTGGCCCACTGTGGGAACCTGTCCTGCTTGTCTGACCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | TTGTGCTTGCTCATGTCGATGAGCTGTGAGGCCGTACGCGCAGCATaGAGGGCCCCCTCTACGACACACTCTGGCTGCCCCACGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LCLLMSMSCEAVRAA*RAPSTTHSGCPTKV Trigger: CACTTTCGTGGGGCAGCCAGAGTGTGTCGTAGAGGGGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAGCAAGCACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | TTTGAGCTTCTCAGGCAGGGCCTCATACTCTCCAGCCCGGATGGCTaGCAGGGTCTGACGACTGGGCGTCTGAGCTGCCTCACCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FELLRQGLILSSPDG*QGLTTGRLSCLTIE Trigger: CTCTATGGTGAGGCAGCTCAGACGCCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGAGAGTATGAGGCCCTGCCTGAGAAGCTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | GCTGGGCAGAGGCTGCGTGGAAGGGTGGGATCAGGCGTCGCATTGTaGAATCCAAGTGATCAAACTGGCGCCGGCCATAGGTCATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQRLRGRVGSGVAL*NPSDQTGAGHRSSG Trigger: GCCAGATGACCTATGGCCGGCGCCAGTTTGATCACTTGGATTCCACAATGCGACGCCTGATCCCACCCTTCCACGCAGCCTCTGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCCCCCTGTCTCCAAGGCTTaGGCTGCCACCTGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCIEPQPGPDGVMADSSPPVSKA*AATCRS Trigger: TGACCTGCAGGTGGCAGCCAAAGCCTTGGAGACAGG...GGGGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | CTCACCGGGATGAAGGGACACACATCCAGAGCGCCCATTCGAGGGTaGTCACCCTTGTGCTTGCTCATGTCGATGAGCTGTGAGGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LTGMKGHTSRAPIRG*SPLCLLMSMSCEAV Trigger: TACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCACCCTCGAATGGGCGCTCTGGATGTGTGTCCCTTCATCCCGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | AAGTACGCACCAAACACACCTGTCTCCAAGGCTTTGGCTGCCACCTaGAGGTCAGACAAGCAGGACAGGTTCCCACAGTGGGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYAPNTPVSKALAAT*RSDKQDRFPQWASS Trigger: GGAGCTGGCCCACTGTGGGAACCTGTCCTGCTTGTCTGACCTGCAGGTGGCAGCCAAAGCCTTGGAGACAGGTGTGTTTGGTGCGTACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | CCTGCAGAGCGCATGCACGCCTGTCTCTCTCTTCAGGCGTGTTCTTaGGCAGCTTTATTGCCTCCAAACAGGCAGCAAACGCCCGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAERMHACLSLQACS*AALLPPNRQQTPGH Trigger: ATGCCCGGGCGTTTGCTGCCTGTTTGGAGGCAATAAAGCTGCCCAAGAACACGCCTGAAGAGAGAGACAGGCGTGCATGCGCTCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS TCA 90 bp | CCAACAGGCTCTGTTCTGGTCCACTATCGGGGACTAGGTACTCGATaGTCCGTTCCTTTGGGTCGAAGGGTGCCAGCGAATCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGSVLVHYRGLGTR*SVPLGRRVPANPGP Trigger: TGGGCCTGGATTCGCTGGCACCCTTCGACCCAAAGGAACGGATCATCGAGTACCTAGTCCCCGATAGTGGACCAGAACAGAGCCTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS GCA 90 bp | TCCAGCCCGGATGGCTGGCAGGGTCTGACGACTGGGCGTCTGAGCTaGCTCACCATAGAGATACACTGGTACATTAAGTTCCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPDGWQGLTTGRLS*LTIEIHWYIKFLCQ Trigger: CTGGCAGAGGAACTTAATGTACCAGTGTATCTCTATGGTGAGGCAGCTCAGACGCCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS TCA 90 bp | GTGTGCAGAGCTGTGACCTCAAAGTCCAGGAGGTTTGTGGACACCTaGGCCAGGTTCTTCTCTTCCAGGTACCAACCGATGCCCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VCRAVTSKSRRFVDT*ARFFSSRYQPMPWT Trigger: GGTCCAGGGCATCGGTTGGTACCTGGAAGAGAAGAACCTGGCTCAGGTGTCCACAAACCTCCTGGACTTTGAGGTCACAGCTCTGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS GCA 90 bp | TTGTGGACACCTGAGCCAGGTTCTTCTCTTCCAGGTACCAACCGATaGCCTGGACCTTTTTCAGACGTCCAGGCTGGTCTTTCCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWTPEPGSSLPGTNR*PGPFSDVQAGLSLG Trigger: GCCGAGGGAAAGACCAGCCTGGACGTCTGAAAAAGGTCCAGGGCATCGGTTGGTACCTGGAAGAGAAGAACCTGGCTCAGGTGTCCACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CCA 90 bp | GGTCTGACGACTGGGCGTCTGAGCTGCCTCACCATAGAGATACACTaGTACATTAAGTTCCTCTGCCAGCCGCTGCCCAAATGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLTTGRLSCLTIEIH*YIKFLCQPLPKCLG Trigger: GCCAAGGCATTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTATCTCTATGGTGAGGCAGCTCAGACGCCCAGTCGTCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | TTGCATCTTCTGATCCTGCATAGACAGCTGTGCATTGAGCCCCAACCTGGCCCTCGAGGGTGCTCACCCTaGTGCTTGCTCATGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHLLILHRQLCIEPQPGPRGCSP*CLLMSM Trigger: CATCGACATGAGCAAGCACAAGGGTGAGCACCCTCG...AGGGCCAGGTTGGGGCTCAATGCACAGCTGTCTATGCAGGATCAGAAGATGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGCATTGAGCCCCAACCTGGCCCTGATGGTGTCATGGCTGACTCTTCCCTCTTGGGCAGCTTTATaGCCTCCAAACAGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SCALSPNLALMVSWLTLPSWAAL*PPNRQQ Trigger: TTGCTGCCTGTTTGGAGGCAATAAAGCTGCCCAAGA...GGGAAGAGTCAGCCATGACACCATCAGGGCCAGGTTGGGGCTCAATGCACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 90 bp | TTCCCTCGGCCCTGCTCCCGCAGGTTAAGAGCAATACGGTGGGCCTaGTCCTTGGTGCTTAGCAGGTTGATATTGAATGCAATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPRPCSRRLRAIRWA*SLVLSRLILNAMRN Trigger: GTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCTTAACCTGCGGGAGCAGGGCCGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 90 bp | TGGTCTTTCCCTCGGCCCTGCTCCCGCAGGTTAAGAGCAATACGGTaGGCCTGCTCCTTGGTGCTTAGCAGGTTGATATTGAATGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WSFPRPCSRRLRAIR*ACSLVLSRLILNAM Trigger: CATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCTTAACCTGCGGGAGCAGGGCCGAGGGAAAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS GCA 90 bp | CTGAGCTGCCTCACCATAGAGATACACTGGTACATTAAGTTCCTCTaGCAGCCGCTGCCCAAATGCCTTGGCACAGAGCACACACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSCLTIEIHWYIKFL*QPLPKCLGTEHTLF Trigger: GAAGAGTGTGTGCTCTGTGCCAAGGCATTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTATCTCTATGGTGAGGCAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | AGGATACCACCACCAATCAGGCCCTACCATACCCTACCCCAAACCCCCTCCGTTTTGGTGCTTAGCAGGTaGATATTGAATGCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RIPPPIRPYHTLPQTPSVLVLSR*ILNAMR Trigger: CCTCATTGCATTCAATATCAACCTGCTAAGCACCAA...AACGGAGGGGGTTTGGGGTAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | CCCCAAGCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACTCAATCACCTCCTGGTaGTTCCCCTCTGAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQARLGPLKIGKEYWKLDSITSW*FPSEKL Trigger: CAACTTCTCAGAGGGGAACAACCAGGAGGTGATTGA...GTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGCTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | TTCAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCACGGTGGGCCTGCTCCTaGGTGCTTAGCAGGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FRIYQKPWITEGIRIPPPRWACS*VLSRLI Trigger: TATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCG...TGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATTCTTCAGGCGTGTTCTaGGGCAGCTTTATTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QNLPETMDNRGYQDTTTNSSGVF*GSFIAS Trigger: GGAGGCAATAAAGCTGCCCAAGAACACGCCTGAAGA...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGCTTGGGCCACTTAAGATAGGTAAGGAATACTGGAAGTTGGACCATTCAAGGTTGATGAGCACGTaGAAGTACGCACCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: ARLGPLKIGKEYWKLDHSRLMST*KYAPNT Trigger: TGTGTTTGGTGCGTACTTCAACGTGCTCATCAACCT...TGAATGGTCCAACTTCCAGTATTCCTTACCTATCTTAAGTGGCCCAAGCCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | TGGATAACAGAGGGTATCAGGATACCACCACCAATCAGGCCCTACCATACCCTACTTAGCAGGTTGATATaGAATGCAATGAGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WITEGIRIPPPIRPYHTLLSRLI*NAMRNF Trigger: GAAGTTCCTCATTGCATTCAATATCAACCTGCTAAG...TAGGGTATGGTAGGGCCTGATTGGTGGTGGTATCCTGATACCCTCTGTTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS-3UTR CAA 90 bp | CAGAATTTACCAGAAACCATGGATAACAGAGGGTATCAGGATACCACCACCAATGTCATGTCCTTCAGGTaGATGAGCACGTTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QNLPETMDNRGYQDTTTNVMSFR*MSTLKY Trigger: GTACTTCAACGTGCTCATCAACCTGAAGGACATGAC...ATTGGTGGTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | CAGAGGCACCAGGCCCACCAGCTGCGAGCCCACCACTaGGAGATTCAGCTCCTGAGCCTCTCTGCGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QRHQAHQLRAHH*EIQLLSLSAGL Trigger: GAGGCCCGCAGAGAGGCTCAGGAGCTGAATCTCCCAGTGGTGGGCTCGCAGCTGGTGGGCCTGGTGCCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | AGAAGCCAGGGCTGCACCCAGAGCTGCTACCGCTGCTaGTACAGAACCTCCTCCTGGGGCAGCAGAGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSQGCTQSCYRC*YRTSSWGSRAG Trigger: GCCCGCTCTGCTGCCCCAGGAGGAGGTTCTGTAGCAGCAGCGGTAGCAGCTCTGGGTGCAGCCCTGGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | CTCAGGCAGGGCCTCATACTCTCCAGCCCGGATGGCTaGCAGGGTCTGACGACTGGGCGTCTGAGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRQGLILSSPDG*QGLTTGRLSCL Trigger: GAGGCAGCTCAGACGCCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGAGAGTATGAGGCCCTGCCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | CTCATGTCGATGAGCTGTGAGGCCGTACGCGCAGCATaGAGGGCCCCCTCTACGACACACTCTGGCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LMSMSCEAVRAA*RAPSTTHSGCP Trigger: GGGGCAGCCAGAGTGTGTCGTAGAGGGGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | GCTTCTCAGGCAGGGCCTCATACTCTCCAGCCCGGATaGCTGGCAGGGTCTGACGACTGGGCGTCTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASQAGPHTLQPG*LAGSDDWASEL Trigger: CAGCTCAGACGCCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGAGAGTATGAGGCCCTGCCTGAGAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | CCACAGTGGGCCAGCTCCTGCAGCGCTGGCCATAGCTaGGACACAGTCTCGGCCAGTTTCAGTGGCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PQWASSCSAGHS*DTVSASFSGTA Trigger: CGCTGTGCCACTGAAACTGGCCGAGACTGTGTCCCAGCTATGGCCAGCGCTGCAGGAGCTGGCCCACTGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | CATAGAAGCCAGGGCTGCACCCAGAGCTGCTACCGCTaGTGCTACAGAACCTCCTCCTGGGGCAGCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: HRSQGCTQSCYR*CYRTSSWGSRA Trigger: CGCTCTGCTGCCCCAGGAGGAGGTTCTGTAGCAGCAGCGGTAGCAGCTCTGGGTGCAGCCCTGGCTTCTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | CAGAGCTGCTACCGCTGCTGCTACAGAACCTCCTCCTaGGGCAGCAGAGCGGGCTCCCACCTCCCGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: QSCYRCCYRTSS*GSRAGSHLPNK Trigger: TTTGTTCGGGAGGTGGGAGCCCGCTCTGCTGCCCCAGGAGGAGGTTCTGTAGCAGCAGCGGTAGCAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 72 bp | GTGCTCACCCTTGTGCTTGCTCATGTCGATGAGCTGTaGGGCCGTACGCGCAGCATGGAGGGCCCCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLTLVLAHVDEL*GRTRSMEGPLY Trigger: GTAGAGGGGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 72 bp | TTCGAGGGTGCTCACCCTTGTGCTTGCTCATGTCGATaGGCTGTGAGGCCGTACGCGCAGCATGGAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FEGAHPCACSCR*AVRPYAQHGGP Trigger: GGGCCCTCCATGCTGCGCGTACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCACCCTCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 72 bp | ACCAGCTGCGAGCCCACCACTGGGAGATTCAGCTCCTaGGCCTCTCTGCGGGCCTCCTCAAACACTGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSCEPTTGRFSS*ASLRASSNTVC Trigger: GCACACAGTGTTTGAGGAGGCCCGCAGAGAGGCTCAGGAGCTGAATCTCCCAGTGGTGGGCTCGCAGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | AGCGACTGCCTGTCTCAGCCCCTCCTGCAGAGCGCATaGACGCCTGTCTCTCTCTTCAGGCGTGTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDCLSQPLLQSA*TPVSLFRRVLG Trigger: CCCAAGAACACGCCTGAAGAGAGAGACAGGCGTGCATGCGCTCTGCAGGAGGGGCTGAGACAGGCAGTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | TTCAGTGGCACAGCGACTGCCTGTCTCAGCCCCTCCTaGAGAGCGCATGCACGCCTGTCTCTCTCTTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSGTATACLSPS*RAHARLSLSSG Trigger: GCCTGAAGAGAGAGACAGGCGTGCATGCGCTCTGCAGGAGGGGCTGAGACAGGCAGTCGCTGTGCCACTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | ACGCGCAGCATGGAGGGCCCCCTCTACGACACACTCTaGCTGCCCCACGAAAGTGTAGACAGTGCGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRSMEGPLYDTL*LPHESVDSAVG Trigger: ACCAACCGCACTGTCTACACTTTCGTGGGGCAGCCAGAGTGTGTCGTAGAGGGGGCCCTCCATGCTGCGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | GCCATAGGTCATCTGGCCCACCATAGAAGCCAGGGCTaGACCCAGAGCTGCTACCGCTGCTGCTACAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: AIGHLAHHRSQG*TQSCYRCCYRT Trigger: GGTTCTGTAGCAGCAGCGGTAGCAGCTCTGGGTGCAGCCCTGGCTTCTATGGTGGGCCAGATGACCTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | GGAGGGTCCGGCATCGACGTCCAACAGCACACAGCCTaGGGTCTGGGAGATGGCTCGAGAGATGGCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSGIDVQQHTA*GLGDGSRDGIN Trigger: ATTGATGCCATCTCTCGAGCCATCTCCCAGACCCCAGGCTGTGTGCTGTTGGACGTCGATGCCGGACCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | GAGCTAGGGCCAAAGTCTGGCACCCACTCGGCCTGTTaGAGCTTCTCAGGCAGGGCCTCATACTCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ELGPKSGTHSAC*SFSGRASYSPA Trigger: GGCTGGAGAGTATGAGGCCCTGCCTGAGAAGCTCAAACAGGCCGAGTGGGTGCCAGACTTTGGCCCTAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | AGGCTGCGTGGAAGGGTGGGATCAGGCGTCGCATTGTaGAATCCAAGTGATCAAACTGGCGCCGGCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRGRVGSGVAL*NPSDQTGAGHR Trigger: CCTATGGCCGGCGCCAGTTTGATCACTTGGATTCCACAATGCGACGCCTGATCCCACCCTTCCACGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | CAGAGGCTGCGTGGAAGGGTGGGATCAGGCGTCGCATaGTGGAATCCAAGTGATCAAACTGGCGCCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QRLRGRVGSGVA*WNPSDQTGAGH Trigger: ATGGCCGGCGCCAGTTTGATCACTTGGATTCCACAATGCGACGCCTGATCCCACCCTTCCACGCAGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CAA 90 bp | TCAGCTGGGCAGAGGCTGCGTGGAAGGGTGGGATCAGGCGTCGCATaGTGGAATCCAAGTGATCAAACTGGCGCCGGCCATAGGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SAGQRLRGRVGSGVA*WNPSDQTGAGHRSS Trigger: AGATGACCTATGGCCGGCGCCAGTTTGATCACTTGGATTCCACAATGCGACGCCTGATCCCACCCTTCCACGCAGCCTCTGCCCAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CAA 90 bp | TCCTGCAGAGCGCATGCACGCCTGTCTCTCTCTTCAGGCGTGTTCTaGGGCAGCTTTATTGCCTCCAAACAGGCAGCAAACGCCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRAHARLSLSSGVF*GSFIASKQAANARA Trigger: TGCCCGGGCGTTTGCTGCCTGTTTGGAGGCAATAAAGCTGCCCAAGAACACGCCTGAAGAGAGAGACAGGCGTGCATGCGCTCTGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CAA 90 bp | TACACTGGTACATTAAGTTCCTCTGCCAGCCGCTGCCCAAATGCCTaGGCACAGAGCACACACTCTTCCATGCTGACGCCCCTCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: YTGTLSSSASRCPNA*AQSTHSSMLTPLTG Trigger: CCCGGTGAGGGGCGTCAGCATGGAAGAGTGTGTGCTCTGTGCCAAGGCATTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS GCA 72 bp | TCCAGGCCCAGCCGGTTCACCACCAGCCGTATCCGATaGTCCTCCTCCAGAACAAACAGCTTCTCCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRPSRFTTSRIR*SSSRTNSFSLS Trigger: TGACAAGGAGAAGCTGTTTGTTCTGGAGGAGGAGCATCGGATACGGCTGGTGGTGAACCGGCTGGGCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CCA 72 bp | GCACACAGCCTGGGGTCTGGGAGATGGCTCGAGAGATaGCATCAATCACCTCCTGGTTGTTCCCCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AHSLGSGRWLER*HQSPPGCSPLR Trigger: TCTCAGAGGGGAACAACCAGGAGGTGATTGATGCCATCTCTCGAGCCATCTCCCAGACCCCAGGCTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CAA 72 bp | CACACATCCAGAGCGCCCATTCGAGGGTGCTCACCCTaGTGCTTGCTCATGTCGATGAGCTGTGAGGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: HTSRAPIRGCSP*CLLMSMSCEAV Trigger: TACGGCCTCACAGCTCATCGACATGAGCAAGCACAAGGGTGAGCACCCTCGAATGGGCGCTCTGGATGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS GCA 72 bp | CCTGAGCCAGGTTCTTCTCTTCCAGGTACCAACCGATaGCCTGGACCTTTTTCAGACGTCCAGGCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PEPGSSLPGTNR*PGPFSDVQAGL Trigger: AAGACCAGCCTGGACGTCTGAAAAAGGTCCAGGGCATCGGTTGGTACCTGGAAGAGAAGAACCTGGCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CCA 72 bp | GCCAGGTTCTTCTCTTCCAGGTACCAACCGATGCCCTaGACCTTTTTCAGACGTCCAGGCTGGTCTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARFFSSRYQPMP*TFFRRPGWSFP Trigger: AGGGAAAGACCAGCCTGGACGTCTGAAAAAGGTCCAGGGCATCGGTTGGTACCTGGAAGAGAAGAACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
||
| CDS CAA 72 bp | GCGCATGCACGCCTGTCTCTCTCTTCAGGCGTGTTCTaGGGCAGCTTTATTGCCTCCAAACAGGCAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: AHARLSLSSGVF*GSFIASKQAAN Trigger: GTTTGCTGCCTGTTTGGAGGCAATAAAGCTGCCCAAGAACACGCCTGAAGAGAGAGACAGGCGTGCATGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 90 bp | CGGCCCTGCTCCCGCAGGTTAAGAGCAATACGGTGGGCCTGCTCCTaGGTGCTTAGCAGGTTGATATTGAATGCAATGAGGAACTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: RPCSRRLRAIRWACS*VLSRLILNAMRNFR Trigger: ACGGAAGTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCTTAACCTGCGGGAGCAGGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS TCA 72 bp | GCTGTGACCTCAAAGTCCAGGAGGTTTGTGGACACCTaGGCCAGGTTCTTCTCTTCCAGGTACCAACCGATG | + |
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Preference number: 6 (lower is better) Translates to: AVTSKSRRFVDT*ARFFSSRYQPM Trigger: CATCGGTTGGTACCTGGAAGAGAAGAACCTGGCTCAGGTGTCCACAAACCTCCTGGACTTTGAGGTCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CCA 72 bp | ACTGGGCGTCTGAGCTGCCTCACCATAGAGATACACTaGTACATTAAGTTCCTCTGCCAGCCGCTGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TGRLSCLTIEIH*YIKFLCQPLPK Trigger: TTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTATCTCTATGGTGAGGCAGCTCAGACGCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | GAGATGGCTCGAGAGATGGCATCAATCACCTCCTGGTaGTTCCCCTCTGAGAAGTTGGGGACACATTCCACC | + |
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Preference number: 6 (lower is better) Translates to: EMAREMASITSW*FPSEKLGTHST Trigger: GGTGGAATGTGTCCCCAACTTCTCAGAGGGGAACAACCAGGAGGTGATTGATGCCATCTCTCGAGCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | CGGTGGGCCTGCTCCTTGGTGCTTAGCAGGTTGATATaGAATGCAATGAGGAACTTCCGTGCACCCGTGACA | + |
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Preference number: 6 (lower is better) Translates to: RWACSLVLSRLI*NAMRNFRAPVT Trigger: TGTCACGGGTGCACGGAAGTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 90 bp | AGAGCAATACGGTGGGCCTGCTCCTTGGTGCTTAGCAGGTTGATATaGAATGCAATGAGGAACTTCCGTGCACCCGTGACAGTAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RAIRWACSLVLSRLI*NAMRNFRAPVTVAP Trigger: GGGTGCTACTGTCACGGGTGCACGGAAGTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | AGATACACTGGTACATTAAGTTCCTCTGCCAGCCGCTaGCCAAATGCCTTGGCACAGAGCACACACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RYTGTLSSSASR*PNALAQSTHSS Trigger: GGAAGAGTGTGTGCTCTGTGCCAAGGCATTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS GCA 72 bp | CTCACCATAGAGATACACTGGTACATTAAGTTCCTCTaGCAGCCGCTGCCCAAATGCCTTGGCACAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LTIEIHWYIKFL*QPLPKCLGTEH Trigger: GTGCTCTGTGCCAAGGCATTTGGGCAGCGGCTGGCAGAGGAACTTAATGTACCAGTGTATCTCTATGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | GCAATACGGTGGGCCTGCTCCTTGGTGCTTAGCAGGTaGATATTGAATGCAATGAGGAACTTCCGTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: AIRWACSLVLSR*ILNAMRNFRAP Trigger: GGGTGCACGGAAGTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | TCCCGCAGGTTAAGAGCAATACGGTGGGCCTGCTCCTaGGTGCTTAGCAGGTTGATATTGAATGCAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRRLRAIRWACS*VLSRLILNAMR Trigger: CCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCTTAACCTGCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 90 bp | AGGTTAAGAGCAATACGGTGGGCCTGCTCCTTGGTGCTTAGCAGGTaGATATTGAATGCAATGAGGAACTTCCGTGCACCCGTGACAGTA | + |
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Preference number: 6 (lower is better) Translates to: RLRAIRWACSLVLSR*ILNAMRNFRAPVTV Trigger: TACTGTCACGGGTGCACGGAAGTTCCTCATTGCATTCAATATCAACCTGCTAAGCACCAAGGAGCAGGCCCACCGTATTGCTCTTAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | ACATCATCCGTCATGTCCTTCAGGTTGATGAGCACGTaGAAGTACGCACCAAACACACCTGTCTCCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TSSVMSFRLMST*KYAPNTPVSKA Trigger: AGCCTTGGAGACAGGTGTGTTTGGTGCGTACTTCAACGTGCTCATCAACCTGAAGGACATGACGGATGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 90 bp | TCTTTAAATACATCATCCGTCATGTCCTTCAGGTTGATGAGCACGTaGAAGTACGCACCAAACACACCTGTCTCCAAGGCTTTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SLNTSSVMSFRLMST*KYAPNTPVSKALAA Trigger: GGCAGCCAAAGCCTTGGAGACAGGTGTGTTTGGTGCGTACTTCAACGTGCTCATCAACCTGAAGGACATGACGGATGATGTATTTAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 90 bp | TGGTGTGTCTTCTCTTTAAATACATCATCCGTCATGTCCTTCAGGTaGATGAGCACGTTGAAGTACGCACCAAACACACCTGTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: WCVFSLNTSSVMSFR*MSTLKYAPNTPVSK Trigger: CTTGGAGACAGGTGTGTTTGGTGCGTACTTCAACGTGCTCATCAACCTGAAGGACATGACGGATGATGTATTTAAAGAGAAGACACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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| CDS CAA 72 bp | TTCTCTTTAAATACATCATCCGTCATGTCCTTCAGGTaGATGAGCACGTTGAAGTACGCACCAAACACACCT | + |
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Preference number: 6 (lower is better) Translates to: FSLNTSSVMSFR*MSTLKYAPNTP Trigger: AGGTGTGTTTGGTGCGTACTTCAACGTGCTCATCAACCTGAAGGACATGACGGATGATGTATTTAAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001183.8 |
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