Pregenerated sensors for FSTL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020325Ensembl transcript IDs: ENSMUST00000020575.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTaGCCCCAAACAGCATCTGGCTGGTGTCACCACCTGCAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: ASCSSSCQSEGSNSV*PQTASGWCHHLQLG Trigger: GCCCAGCTGCAGGTGGTGACACCAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTGACAGCTGCTGCTGCAACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CCA 90 bp | AGAGTGACTCTGGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTaGCTGTCCTGGGCCTGTGAGTCAGCCAGGGTCCAATGTTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: RVTLGALGTVNPSVH*LSWACESARVQCFY Trigger: GTAGAAACATTGGACCCTGGCTGACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCAGAGTCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 90 bp | ACCCTGAGTGGACCAAACAGGAATGAGCCCAGTGTTTCTCTGACCTaGTGTTGCCCGCTCTGGTCTGAGGCCAGCCATATGCAAACACCA | + |
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Preference number: 1 (lower is better) Translates to: TLSGPNRNEPSVSLT*CCPLWSEASHMQTP Trigger: TGGTGTTTGCATATGGCTGGCCTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTTGGTCCACTCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 90 bp | TTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTGGAGGGTGGTaGGAAAGACCCTGGGAACTCCTTGCCCCCAAACTGGAGGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: FGDITRKAQLRTGGW*ERPWELLAPKLEGW Trigger: CCAACCCTCCAGTTTGGGGGCAAGGAGTTCCCAGGGTCTTTCTCACCACCCTCCAGTTCTCAGCTGTGCCTTTCTTGTAATATCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | CCAACATGTCTGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTGAACACTACCTGCAGCTGGGCTTaGGGACGAGTGGGGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTCLFMRCWGWSPGSVNTTCSWA*GRVGLV Trigger: CACCAGCCCCACTCGTCCCCAAGCCCAGCTGCAGGT...AGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTGCAGGGGGATCTCCATaGAGCTGCCATCCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAICKHQLIGCALRQLQPAGGSP*SCHPWA Trigger: TGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGC...AGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAGTGACTCTGGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGCGGGATGGCGTCAAATaGCAGGCCCAGTGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARVTLGALGTVNPSVHWLRDGVK*QAQWLQ Trigger: CTGCAGCCACTGGGCCTGGCATTTGACGCCATCCCG...CAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCAGAGTCACTCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CAA 90 bp | GCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTaGGGTTCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACC | + |
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Preference number: 2 (lower is better) Translates to: AGGSPCSCHPWAAGV*GSNFDPSTWVMAHT Trigger: GGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCAGGGGGATCCCCAAGTaGTTCCAGGCCAGGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LHAAAIPGQQGSWVLTLIRGIPK*FQARFG Trigger: CCCAAACCTGGCCTGGAACCACTTGGGGATCCCCCT...GATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATGGCAGCTGCATGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGCAGTGGGTGCTAGAGTaGCTCTGGGTGCTCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FLEGTCGCGQVAAAAVRVQWVLE*LWVLWA Trigger: TGCCCAGAGCACCCAGAGTCACTCTAGCACCCACTG...CACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCTAAGGTGGGTGTGGGCAAGTTaGAGCAGCAGCTGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LVRQNSRVGEATIAPLLRWVWAS*SSSCQS Trigger: ACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCA...CCTTAGCAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCTAAGGAGCCTAGAAAGCAGGTaGGGAGATCATAGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LVRQNSRVGEATIAPLLRSLESR*GDHSRG Trigger: CCCCCTGCTATGATCTCCCCACCTGCTTTCTAGGCT...CCTTAGCAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR TCA 90 bp | CCAACATGTCTGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTGAACACTATCCCAGTACCTGGGTaGTGGCACATACCAACTATT | + |
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Preference number: 2 (lower is better) Translates to: PTCLFMRCWGWSPGSVNTIPVPG*WHIPTI Trigger: AATAGTTGGTATGTGCCATCACCCAGGTACTGGGAT...AGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CAA 90 bp | AGCACTCTCTACCTAAATGCATTGCAGCTCCCCCTTTTGGCTTCCTaGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: STLYLNALQLPLLAS*KALVGVGKLQQQLS Trigger: TGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCCAAAAGGGGGAGCTGCAATGCATTTAGGTAGAGAGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGGTCACCACCTGCAGCTaGGCTTGGGGACGAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: IRSYIAQAGLELIMWPRMVTTCS*AWGRVG Trigger: CCCCACTCGTCCCCAAGCCCAGCTGCAGGTGGTGAC...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTGGAGGGTGGTGAGAGTGCTCTGGGCACAGTaGATCCTAGTGTCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: HFWGYYKKGTAENWRVVRVLWAQ*ILVSTG Trigger: GCCAGTGGACACTAGGATTCACTGTGCCCAGAGCAC...TCTCACCACCCTCCAGTTCTCAGCTGTGCCTTTCTTGTAATATCCCCAAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTGGAGGGTGGTGAGAAGCCCAGTGTTTCTCTaGCCTGATGTTGCCCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HFWGYYKKGTAENWRVVRSPVFL*PDVARS Trigger: AGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCT...TCTCACCACCCTCCAGTTCTCAGCTGTGCCTTTCTTGTAATATCCCCAAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGAGGCACTTGTGGGTGTaGGCAAGTTGCAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: IRSYIAQAGLELIMWPRMRHLWV*ASCSSS Trigger: GCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCT...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCTAAGGCTTGAACTCATAATGTaGCCAAGGATGAACTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: LVRQNSRVGEATIAPLLRLELIM*PRMNLN Trigger: GTTTAAGTTCATCCTTGGCCACATTATGAGTTCAAG...CCTTAGCAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGCTGAGGCCAGCCATATaGAAACACCAACTCATCGGC | + |
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Preference number: 2 (lower is better) Translates to: IRSYIAQAGLELIMWPRMLRPAI*KHQLIG Trigger: GCCGATGAGTTGGTGTTTGCATATGGCTGGCCTCAG...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGCAACATGTCTGTTTATaGGGTGCTGGGGATGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: IRSYIAQAGLELIMWPRMQHVCL*GAGDGA Trigger: GGCTCCATCCCCAGCACCGCATAAACAGACATGTTG...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCACCTGCAGCTGGGCTaGGGGACGAGTGGGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: ISLVRQNSRVGEATIAPLHLQLG*GTSGAG Trigger: ACCAGCCCCACTCGTCCCCAAGCCCAGCTGCAGGTG...CAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR GCA 72 bp | CAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTaGGACAGCTCCAGCCTAGAAAGCAGGTGGGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: QPYANTNSSAVP*DSSSLESRWGD Trigger: ATCTCCCCACCTGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CCA 72 bp | CCTGAGCCAACATGTCTGTTTATGCGGTGCTGGGGATaGAGCCCGGGCTCGGTGAACACTAGAAAAGCACTC | + |
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Preference number: 3 (lower is better) Translates to: PEPTCLFMRCWG*SPGSVNTRKAL Trigger: GAGTGCTTTTCTAGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTTGGCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGGGTTCCAGGCCAGGTTaGGGAAATGTCCATGTGACA | + |
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Preference number: 3 (lower is better) Translates to: ISLVRQNSRVGEATIAPLGSRPG*GNVHVT Trigger: TGTCACATGGACATTTCCCAAACCTGGCCTGGAACC...CAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 72 bp | GGACCAAACAGGAATGAGCCCAGTGTTTCTCTGACCTaGTGTTGCCCGCTCTGGTCTGAGGCCAGCCATATG | + |
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Preference number: 3 (lower is better) Translates to: GPNRNEPSVSLT*CCPLWSEASHM Trigger: CATATGGCTGGCCTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CCA 72 bp | AGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTaGCCCCAAACAGCATCTGGCTGGTGTCACCACCTG | + |
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Preference number: 3 (lower is better) Translates to: SSSCQSEGSNSV*PQTASGWCHHL Trigger: CAGGTGGTGACACCAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTGACAGCTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 72 bp | TCTACCAGGTTTCACCCTGAGTGGACCAAACAGGAATaGGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: STRFHPEWTKQE*AQCFSDLMLPA Trigger: AGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTTGGTCCACTCAGGGTGAAACCTGGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 72 bp | TGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTaGACACTAGAAAAGCACTCTCTACCTAAATGCATT | + |
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Preference number: 3 (lower is better) Translates to: CLCGAGDGARAR*TLEKHSLPKCI Trigger: AATGCATTTAGGTAGAGAGTGCTTTTCTAGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CCA 72 bp | TTTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTaGAGGGTGGTGAGAAAGACCCTGGGAACTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: FWGYYKKGTAEN*RVVRKTLGTPC Trigger: GCAAGGAGTTCCCAGGGTCTTTCTCACCACCCTCCAGTTCTCAGCTGTGCCTTTCTTGTAATATCCCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 72 bp | GAACTCATAATGTGGCCAAGGATGAACTTAAACTCCTaGTGCCCTTGCCTCTACTTTCTAAGTACTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: ELIMWPRMNLNS*CPCLYFLSTGM Trigger: CATCCCAGTACTTAGAAAGTAGAGGCAAGGGCATCAGGAGTTTAAGTTCATCCTTGGCCACATTATGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CCA 72 bp | GCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTaGGTGATGGCACATACCAACTATTATAAAAATCTC | + |
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Preference number: 3 (lower is better) Translates to: AGVLGSNFDPST*VMAHTNYYKNL Trigger: GAGATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR TCA 72 bp | GGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTaGTGGCACATACCAACTATTATAAAAATCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GSWVLTLIPVPG*WHIPTIIKISL Trigger: AAGGGAGATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTGCATGCGGCACGCCTTaGCGGGGCCGCACTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: PAICKHQLIGCALRQLQPACGTP*RGRTPL Trigger: GAGTGGAGTGCGGCCCCGGCAAGGCGTGCCGCATGC...AGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | CCAACATGTCTGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTGAACACTGCCTCTCTGCCCTGCTaGAGCCAGCACACGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: PTCLFMRCWGWSPGSVNTASLPC*SQHTPP Trigger: CGGTGGCGTGTGCTGGCTCCAGCAGGGCAGAGAGGC...AGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTGTGGCCTCTCTGCCCTaGTGGAGCCAGCACACGCCA | + |
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Preference number: 4 (lower is better) Translates to: PAICKHQLIGCALRQLQPVASLP*WSQHTP Trigger: TGGCGTGTGCTGGCTCCAGCAGGGCAGAGAGGCCAC...AGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | GCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTTGCAGGGGAGGCAGTaGACGAGGCCCAGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: AIPGQQGSWVLTLIPVPGLQGRQ*TRPRNP Trigger: AGGGTTCCTGGGCCTCGTCCACTGCCTCCCCTGCAA...CCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | GCTAGAGTGACTCTGGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGGGGGTTGGAAGGTACTaGGCAGGGCGCAGCGCGACA | + |
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Preference number: 4 (lower is better) Translates to: ARVTLGALGTVNPSVHWLGVGRY*AGRSAT Trigger: TGTCGCGCTGCGCCCTGCCCAGTACCTTCCAACCCC...CAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCAGAGTCACTCTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR TCA 90 bp | CCAACATGTCTGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTGAACACTTGGACCAGGCGGTGTTaGTGTTGCCGGAAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PTCLFMRCWGWSPGSVNTWTRRC*CCRKHS Trigger: GCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCA...AGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | TTTTATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCTCAGAGCCGCAGACCTaGAAGCCCGCGGGAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FYFLGEAELQGRGGYHSSSEPQT*KPAGSP Trigger: GGGGCTTCCCGCGGGCTTCCAGGTCTGCGGCTCTGA...GGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | CAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTGGTGTCACGGCCCAGGAAGCAAGTaGCCTGGCGCAGGTGACACG | + |
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Preference number: 4 (lower is better) Translates to: QSEGSNSVWPQTASGWCHGPGSK*PGAGDT Trigger: CGTGTCACCTGCGCCAGGCCACTTGCTTCCTGGGCC...GTGACACCAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR TCA 90 bp | AAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCAGGTGTATTGCCTGGGTGGGTaGAGTTGGACCAGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KHQLIGCALRQLQPRKQVYCLGG*SWTRRC Trigger: ACACCGCCTGGTCCAACTTCACCCACCCAGGCAATA...CACCTGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCCTCTGCTGGTACTTTaGGGCCACCTGTGCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: ISLVRQNSRVGEATIAPLPLLVL*GHLCRC Trigger: GCATCTGCACAGGTGGCCCCAAAGTACCAGCAGAGG...CAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CAA 72 bp | GAACTGGAGGGTGGTGAGAAAGACCCTGGGAACTCCTaGCCCCCAAACTGGAGGGTTGGGCACCTTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: ELEGGEKDPGNS*PPNWRVGHLPI Trigger: TATGGGAAGGTGCCCAACCCTCCAGTTTGGGGGCAAGGAGTTCCCAGGGTCTTTCTCACCACCCTCCAGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR TCA 90 bp | CATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTGGGAACCCTAGCAGGCTaGTTTTATTGCCTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HPWAAGVLGSNFDPSTWVGTLAG*FYCLGG Trigger: CCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCC...CACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR GCA 90 bp | GCTAGAGTGACTCTGGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGGTTCTCTTCCTCCTCTaGTGGTACTTTGGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: ARVTLGALGTVNPSVHWLVLFLL*WYFGAT Trigger: GGTGGCCCCAAAGTACCAGCAGAGGAGGAAGAGAAC...CAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCAGAGTCACTCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CAA 72 bp | TCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTaGGGTTCTAACTTTGATCCCAGTACCTGGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: SPCSCHPWAAGV*GSNFDPSTWVM Trigger: CATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATGGCAGCTGCATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | CACTTTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTGGAGGGTGGTGAGAGGTGCCGAACCCCAATaGAGCGGCCCAGGAAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HFWGYYKKGTAENWRVVRGAEPQ*SGPGSK Trigger: CTTGCTTCCTGGGCCGCTCCATTGGGGTTCGGCACC...TCTCACCACCCTCCAGTTCTCAGCTGTGCCTTTCTTGTAATATCCCCAAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| 3UTR CAA 72 bp | TACCTAAATGCATTGCAGCTCCCCCTTTTGGCTTCCTaGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLNALQLPLLAS*KALVGVGKLQQ Trigger: CTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCCAAAAGGGGGAGCTGCAATGCATTTAGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGTCCACAAGGCACGACTaGGGACGCGGGCACACTACC | + |
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Preference number: 4 (lower is better) Translates to: IRSYIAQAGLELIMWPRMSTRHD*GRGHTT Trigger: GGTAGTGTGCCCGCGTCCCCAGTCGTGCCTTGTGGA...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | CCAATGTTTCTACCAGGTTTCACCCTGAGTGGACCAAACAGGAATGAGCCCAGTCTCTTCCTCCTCTGCTaGTACTTTGGGGCCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: PMFLPGFTLSGPNRNEPSLFLLC*YFGATC Trigger: ACAGGTGGCCCCAAAGTACCAGCAGAGGAGGAAGAG...ACTGGGCTCATTCCTGTTTGGTCCACTCAGGGTGAAACCTGGTAGAAACATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR GCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGTCTTCAGCACCAGACTaGAGGTGGCCTCTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IRSYIAQAGLELIMWPRMSSAPD*RWPLCP Trigger: AGGGCAGAGAGGCCACCTGCAGTCTGGTGCTGAAGA...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | ATAAGATCTTATATAGCCCAGGCTGGCCTTGAACTCATAATGTGGCCAAGGATGACCTGTGCAGATGCCTaGGTGCCGAACCCCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: IRSYIAQAGLELIMWPRMTCADA*VPNPNG Trigger: TCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGT...CATCCTTGGCCACATTATGAGTTCAAGGCCAGCCTGGGCTATATAAGATCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR GCA 90 bp | GCACATACCAACTATTATAAAAATCTCCCTTCAGTCCTTGTGATACGTGCTCAGACACACCACGCAGTGTaGGCTGCCGGTCTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: AHTNYYKNLPSVLVIRAQTHHAV*AAGLIH Trigger: GTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGT...CTGAGCACGTATCACAAGGACTGAAGGGAGATTTTTATAATAGTTGGTATGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CCA 90 bp | TCTATTGTCTTTTATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACATTTTATTGCCTGGGTaGGTGAAGTTGGACCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SIVFYFLGEAELQGRGGYILLPG*VKLDQA Trigger: CGCCTGGTCCAACTTCACCCACCCAGGCAATAAAAT...GTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAATAAAAGACAATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | GTCCGCGACAGCGCGCGGTGCGCAGTTCGCATTCGTCCCGGTAGGTaGCGCCATCAGAGCCGCAGACCTGGAAGCCCGCGGGAAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRDSARCAVRIRPGR*RHQSRRPGSPREAP Trigger: AGGGGCTTCCCGCGGGCTTCCAGGTCTGCGGCTCTGATGGCGCCACCTACCGGGACGAATGCGAACTGCGCACCGCGCGCTGTCGCGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 90 bp | GTTGGAAGGTACTGGGCAGGGCGCAGCGCGACACACCACGCAGTGTaGGCTGCCGGTCTGATCCACAAGGCACGACTGGGGACGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VGRYWAGRSATHHAV*AAGLIHKARLGTRA Trigger: TGCCCGCGTCCCCAGTCGTGCCTTGTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCCCAGTACCTTCCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 90 bp | AAGGTACTGGGCAGGGCGCAGCGCGACACACCACGCAGTGTGCGCTaGCGGTCTGATCCACAAGGCACGACTGGGGACGCGGGCACACTA | + |
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Preference number: 5 (lower is better) Translates to: KVLGRAQRDTPRSVR*RSDPQGTTGDAGTL Trigger: TAGTGTGCCCGCGTCCCCAGTCGTGCCTTGTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCCCAGTACCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 90 bp | CTGACACGAGTCTTCAGCACCAGACTGCAGGTGGCCTCTCTGCCCTaGTGGAGCCAGCACACGCCACCGGGCACAGAATCCTCGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LTRVFSTRLQVASLP*WSQHTPPGTESSEP Trigger: GGGCTCCGAGGATTCTGTGCCCGGTGGCGTGTGCTGGCTCCAGCAGGGCAGAGAGGCCACCTGCAGTCTGGTGCTGAAGACTCGTGTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 90 bp | TCCTCCTCTGCTGGTACTTTGGGGCCACCTGTGCAGATGCCTGGGTaGCGAACCCCAATGGAGCGGCCCAGGAAGCAAGTGGCCTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSSAGTLGPPVQMPG*RTPMERPRKQVAWR Trigger: GCGCCAGGCCACTTGCTTCCTGGGCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCCCCAAAGTACCAGCAGAGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | AGCGCAAGACTTTTGACAGCGGCCGCGGTACATGACGCGCAAGTCTaGGTGTCCGCGACAGCGCGCGGTGCGCAGTTCGCATTCGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SARLLTAAAVHDAQV*VSATARGAQFAFVP Trigger: CGGGACGAATGCGAACTGCGCACCGCGCGCTGTCGCGGACACCCAGACTTGCGCGTCATGTACCGCGGCCGCTGTCAAAAGTCTTGCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | GTACTTTGGGGCCACCTGTGCAGATGCCTGGGTGCCGAACCCCAATaGAGCGGCCCAGGAAGCAAGTGGCCTGGCGCAGGTGACACGACG | + |
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Preference number: 5 (lower is better) Translates to: VLWGHLCRCLGAEPQ*SGPGSKWPGAGDTT Trigger: CGTCGTGTCACCTGCGCCAGGCCACTTGCTTCCTGGGCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCCCCAAAGTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | ACACGAGTCTTCAGCACCAGACTGCAGGTGGCCTCTCTGCCCTGCTaGAGCCAGCACACGCCACCGGGCACAGAATCCTCGGAGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: TRVFSTRLQVASLPC*SQHTPPGTESSEPI Trigger: GATGGGCTCCGAGGATTCTGTGCCCGGTGGCGTGTGCTGGCTCCAGCAGGGCAGAGAGGCCACCTGCAGTCTGGTGCTGAAGACTCGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | AACGTTGTTGTTGCCACAGAGTTCTTGGCCGGGGTTGGAAGGTACTaGGCAGGGCGCAGCGCGACACACCACGCAGTGTGCGCTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: NVVVATEFLAGVGRY*AGRSATHHAVCAAG Trigger: ACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCCCAGTACCTTCCAACCCCGGCCAAGAACTCTGTGGCAACAACAACGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | CATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTGAGTTCTTGGCCGGGGTaGGAAGGTACTGGGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HPWAAGVLGSNFDPSTWVSSWPG*EGTGQG Trigger: GCCCTGCCCAGTACCTTCCAACCCCGGCCAAGAACT...CACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | CTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCAGGCGGTGTTGATGTaGCCGGAAGCACAGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LHAAAIPGQQGSWVLTLIQAVLM*PEAQHS Trigger: GGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTG...GATCAAAGTTAGAACCCAAGACCCCTGCTGCCCAGGGATGGCAGCTGCATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 90 bp | TGGACGAGGCCCAGGAACCCTAGCAGGCTGATTTTATTGCCTGGGTaGGTGAAGTTGGACCAGGCGGTGTTGATGTTGCCGGAAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WTRPRNPSRLILLPG*VKLDQAVLMLPEAQ Trigger: CTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCCTGGGCCTCGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | TCTATTGTCTTTTATTTCCTTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACAGCATGCGGCACGCCTaGCCGGGGCCGCACTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SIVFYFLGEAELQGRGGYSMRHA*PGPHST Trigger: AGTGGAGTGCGGCCCCGGCAAGGCGTGCCGCATGCT...GTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAAGGAAATAAAAGACAATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | TTGGTGAGGCAGAACTCCAGGGTAGGGGAGGCTACCATAGCTCCCCTGCTAAGGAGCAGGCTGATTTTATaGCCTGGGTGGGTGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LVRQNSRVGEATIAPLLRSRLIL*PGWVKL Trigger: CAACTTCACCCACCCAGGCAATAAAATCAGCCTGCT...CCTTAGCAGGGGAGCTATGGTAGCCTCCCCTACCCTGGAGTTCTGCCTCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | GCACATACCAACTATTATAAAAATCTCCCTTCAGTCCTTGTGATACGTGCTCAGCCTGGGTGGGTGAAGTaGGACCAGGCGGTGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: AHTNYYKNLPSVLVIRAQPGWVK*DQAVLM Trigger: CATCAACACCGCCTGGTCCAACTTCACCCACCCAGG...CTGAGCACGTATCACAAGGACTGAAGGGAGATTTTTATAATAGTTGGTATGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS-3UTR CAA 90 bp | GCACATACCAACTATTATAAAAATCTCCCTTCAGTCCTTGTGATACGTGCTCAGTTGGACCAGGCGGTGTaGATGTTGCCGGAAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: AHTNYYKNLPSVLVIRAQLDQAV*MLPEAQ Trigger: CTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAA...CTGAGCACGTATCACAAGGACTGAAGGGAGATTTTTATAATAGTTGGTATGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 72 bp | GGCAGGGCGCAGCGCGACACACCACGCAGTGTGCGCTaGCGGTCTGATCCACAAGGCACGACTGGGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: GRAQRDTPRSVR*RSDPQGTTGDA Trigger: CGCGTCCCCAGTCGTGCCTTGTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | AGCGCGCGGTGCGCAGTTCGCATTCGTCCCGGTAGGTaGCGCCATCAGAGCCGCAGACCTGGAAGCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SARCAVRIRPGR*RHQSRRPGSPR Trigger: CCGCGGGCTTCCAGGTCTGCGGCTCTGATGGCGCCACCTACCGGGACGAATGCGAACTGCGCACCGCGCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS TCA 72 bp | GCAGCGCGACACACCACGCAGTGTGCGCTGCCGGTCTaGTCCACAAGGCACGACTGGGGACGCGGGCACACT | + |
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Preference number: 6 (lower is better) Translates to: AARHTTQCALPV*STRHDWGRGHT Trigger: AGTGTGCCCGCGTCCCCAGTCGTGCCTTGTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 72 bp | TACTGGGCAGGGCGCAGCGCGACACACCACGCAGTGTaGGCTGCCGGTCTGATCCACAAGGCACGACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YWAGRSATHHAV*AAGLIHKARLG Trigger: CCCCAGTCGTGCCTTGTGGATCAGACCGGCAGCGCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCCCAGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | GGCCACCTGTGCAGATGCCTGGGTGCCGAACCCCAATaGAGCGGCCCAGGAAGCAAGTGGCCTGGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GHLCRCLGAEPQ*SGPGSKWPGAG Trigger: ACCTGCGCCAGGCCACTTGCTTCCTGGGCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | CTTTTGACAGCGGCCGCGGTACATGACGCGCAAGTCTaGGTGTCCGCGACAGCGCGCGGTGCGCAGTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLTAAAVHDAQV*VSATARGAQFA Trigger: TGCGAACTGCGCACCGCGCGCTGTCGCGGACACCCAGACTTGCGCGTCATGTACCGCGGCCGCTGTCAAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 72 bp | CCTCCTCTGCTGGTACTTTGGGGCCACCTGTGCAGATaGCTGGGTGCCGAACCCCAATGGAGCGGCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPLLVLWGHLCR*LGAEPQWSGPG Trigger: TCCTGGGCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCCCCAAAGTACCAGCAGAGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | GTTGCCACAGAGTTCTTGGCCGGGGTTGGAAGGTACTaGGCAGGGCGCAGCGCGACACACCACGCAGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VATEFLAGVGRY*AGRSATHHAVC Trigger: GCACACTGCGTGGTGTGTCGCGCTGCGCCCTGCCCAGTACCTTCCAACCCCGGCCAAGAACTCTGTGGCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 72 bp | GCTGGTACTTTGGGGCCACCTGTGCAGATGCCTGGGTaGCGAACCCCAATGGAGCGGCCCAGGAAGCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGTLGPPVQMPG*RTPMERPRKQV Trigger: CACTTGCTTCCTGGGCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCCCCAAAGTACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | CTGGGGACGCGGGCACACTACCTGAGCGCAAGACTTTaGACAGCGGCCGCGGTACATGACGCGCAAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGTRAHYLSARL*TAAAVHDAQVW Trigger: CCAGACTTGCGCGTCATGTACCGCGGCCGCTGTCAAAAGTCTTGCGCTCAGGTAGTGTGCCCGCGTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS GCA 72 bp | TCTCTTCCTCCTCTGCTGGTACTTTGGGGCCACCTGTaGAGATGCCTGGGTGCCGAACCCCAATGGAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPPLLVLWGHL*RCLGAEPQWSG Trigger: GCCGCTCCATTGGGGTTCGGCACCCAGGCATCTGCACAGGTGGCCCCAAAGTACCAGCAGAGGAGGAAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | CCTGGGTGGGTGAAGTTGGACCAGGCGGTGTTGATGTaGCCGGAAGCACAGCACTCCTCCCGGCTGACACGA | + |
|
Preference number: 6 (lower is better) Translates to: PGWVKLDQAVLM*PEAQHSSRLTR Trigger: TCGTGTCAGCCGGGAGGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 90 bp | GGGAGGCAGTGGACGAGGCCCAGGAACCCTAGCAGGCTGATTTTATaGCCTGGGTGGGTGAAGTTGGACCAGGCGGTGTTGATGTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRQWTRPRNPSRLIL*PGWVKLDQAVLMLP Trigger: CGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCCTGGGCCTCGTCCACTGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | TTATTGCCTGGGTGGGTGAAGTTGGACCAGGCGGTGTaGATGTTGCCGGAAGCACAGCACTCCTCCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPGWVKLDQAV*MLPEAQHSSRL Trigger: CAGCCGGGAGGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 90 bp | GTGACACGACGAGATGTAGGTAACGTTGTTGTTGCCACAGAGTTCTaGGCCGGGGTTGGAAGGTACTGGGCAGGGCGCAGCGCGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: VTRRDVGNVVVATEF*AGVGRYWAGRSATH Trigger: GTGTGTCGCGCTGCGCCCTGCCCAGTACCTTCCAACCCCGGCCAAGAACTCTGTGGCAACAACAACGTTACCTACATCTCGTCGTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 90 bp | AGGCTGATTTTATTGCCTGGGTGGGTGAAGTTGGACCAGGCGGTGTaGATGTTGCCGGAAGCACAGCACTCCTCCCGGCTGACACGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLILLPGWVKLDQAV*MLPEAQHSSRLTRV Trigger: GACTCGTGTCAGCCGGGAGGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 90 bp | CCCAGGAACCCTAGCAGGCTGATTTTATTGCCTGGGTGGGTGAAGTaGGACCAGGCGGTGTTGATGTTGCCGGAAGCACAGCACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRNPSRLILLPGWVK*DQAVLMLPEAQHSS Trigger: GGAGGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | TCCACTCCGTCGCAGGAATCTTTGCAGGGGAGGCAGTaGACGAGGCCCAGGAACCCTAGCAGGCTGATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: STPSQESLQGRQ*TRPRNPSRLIL Trigger: TAAAATCAGCCTGCTAGGGTTCCTGGGCCTCGTCCACTGCCTCCCCTGCAAAGATTCCTGCGACGGAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | TGGACGAGGCCCAGGAACCCTAGCAGGCTGATTTTATaGCCTGGGTGGGTGAAGTTGGACCAGGCGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WTRPRNPSRLIL*PGWVKLDQAVL Trigger: CAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCCTGGGCCTCGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | CGAGATGTAGGTAACGTTGTTGTTGCCACAGAGTTCTaGGCCGGGGTTGGAAGGTACTGGGCAGGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RDVGNVVVATEF*AGVGRYWAGRS Trigger: GCTGCGCCCTGCCCAGTACCTTCCAACCCCGGCCAAGAACTCTGTGGCAACAACAACGTTACCTACATCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 90 bp | ATTTTATTGCCTGGGTGGGTGAAGTTGGACCAGGCGGTGTTGATGTaGCCGGAAGCACAGCACTCCTCCCGGCTGACACGAGTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLPGWVKLDQAVLM*PEAQHSSRLTRVFS Trigger: GCTGAAGACTCGTGTCAGCCGGGAGGAGTGCTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CCA 72 bp | CCCAGGAACCCTAGCAGGCTGATTTTATTGCCTGGGTaGGTGAAGTTGGACCAGGCGGTGTTGATGTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRNPSRLILLPG*VKLDQAVLMLP Trigger: CGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGGGTTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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| CDS CAA 72 bp | CCTAGCAGGCTGATTTTATTGCCTGGGTGGGTGAAGTaGGACCAGGCGGTGTTGATGTTGCCGGAAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRLILLPGWVK*DQAVLMLPEAQ Trigger: CTGTGCTTCCGGCAACATCAACACCGCCTGGTCCAACTTCACCCACCCAGGCAATAAAATCAGCCTGCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020575.5 |
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