Pregenerated sensors for FSTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022816Ensembl transcript IDs: ENSMUST00000114763.3
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGTGACCCCAGAAAGGCTTCATTCAAACCTGCCTCTGCTCCTCTaGCAACCCGATGCTGTTTCCTTAGTTGCCTCTCGTCCCAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: AVTPERLHSNLPLLL*QPDAVSLVASRPKV Trigger: CACCTTGGGACGAGAGGCAACTAAGGAAACAGCATCGGGTTGGCAGAGGAGCAGAGGCAGGTTTGAATGAAGCCTTTCTGGGGTCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR GCA 90 bp | GCTGTGTGTTCAGGTGATTGTTGGGACCAAAAGGAGAAGCAGACTTaGTGCAGGTCTGTCATGCTGACAGTGGTGACAAGGGTCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: AVCSGDCWDQKEKQT*CRSVMLTVVTRVKA Trigger: TGCTTTGACCCTTGTCACCACTGTCAGCATGACAGACCTGCAGCAAGTCTGCTTCTCCTTTTGGTCCCAACAATCACCTGAACACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 90 bp | GGAGGAGCCTGCTTCCCCAAGACTGACAGTAGTACCCAAGAGTCCTaGTATATGTATGTGAAAAGACCTCCCTGGGTCCTGGATCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: GGACFPKTDSSTQES*YMYVKRPPWVLDLK Trigger: CTTAAGATCCAGGACCCAGGGAGGTCTTTTCACATACATATACCAGGACTCTTGGGTACTACTGTCAGTCTTGGGGAAGCAGGCTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 90 bp | TCAATGTTTCTCTATGCTTTTCCTGTATTCTCCTCGCAGCTGCTGTaGCCCCAGAAAGGCTTCATTCAAACCTGCCTCTGCTCCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SMFLYAFPVFSSQLL*PQKGFIQTCLCSSA Trigger: GGCAGAGGAGCAGAGGCAGGTTTGAATGAAGCCTTTCTGGGGTCACAGCAGCTGCGAGGAGAATACAGGAAAAGCATAGAGAAACATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 90 bp | CCTAGTTACACTGAAGTAGCAGAAGAGGAATGTGGGCTTGCCCTCTaGTACTCAGTGTTACAGGGTTCTAAAGATGATTGGCCAACAGAC | + |
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Preference number: 1 (lower is better) Translates to: PSYTEVAEEECGLAL*YSVLQGSKDDWPTD Trigger: GTCTGTTGGCCAATCATCTTTAGAACCCTGTAACACTGAGTACCAGAGGGCAAGCCCACATTCCTCTTCTGCTACTTCAGTGTAACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 90 bp | GGGAGGGCACAGAACACTAGGCAGAGCCAAATTGTCTTGTTCAGATaGGACCAGGAAAAACTATTTAGGACGAATTCCACTCCCATCTCA | + |
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Preference number: 1 (lower is better) Translates to: GRAQNTRQSQIVLFR*DQEKLFRTNSTPIS Trigger: TGAGATGGGAGTGGAATTCGTCCTAAATAGTTTTTCCTGGTCTCATCTGAACAAGACAATTTGGCTCTGCCTAGTGTTCTGTGCCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 90 bp | TCCCCAAGACTGACAGTAGTACCCAAGAGTCCTGGTATATGTATGTaGAAAGACCTCCCTGGGTCCTGGATCTTAAGAGACACTGATGTT | + |
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Preference number: 1 (lower is better) Translates to: SPRLTVVPKSPGICM*KDLPGSWILRDTDV Trigger: AACATCAGTGTCTCTTAAGATCCAGGACCCAGGGAGGTCTTTTCACATACATATACCAGGACTCTTGGGTACTACTGTCAGTCTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 90 bp | AAGAAACAAAAGCAAATTAACTGTTTGGATCTCAACAGCTGTCTATaGAGATGCTTTGTCCTGTGGCTTCTGTCTGAGGGGCCTCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: KKQKQINCLDLNSCL*RCFVLWLLSEGPLV Trigger: CACAAGAGGCCCCTCAGACAGAAGCCACAGGACAAAGCATCTTCATAGACAGCTGTTGAGATCCAAACAGTTAATTTGCTTTTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR GCA 90 bp | GAATTCCACTCCCATCTCAATAGCTCAACATTCCACACTTTCCTATaGAGGAAAATCTCCATAGTTTATTCGGAGGCTCAAAGAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: EFHSHLNSSTFHTFL*RKISIVYSEAQRKD Trigger: ATCCTTTCTTTGAGCCTCCGAATAAACTATGGAGATTTTCCTGCATAGGAAAGTGTGGAATGTTGAGCTATTGAGATGGGAGTGGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 90 bp | AGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTaGTTTTTCTTATGGTGTAGATTCATCTATCCTAAGGAGAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RIISTKAKPIHAIPG*FFLWCRFIYPKEKV Trigger: TACCTTCTCCTTAGGATAGATGAATCTACACCATAAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | TGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACTGACAGTAGTACCCCCTGTGGCTTCTGTCTaGGGGGCCTCTTGTGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: WIWLPMEEPASPRLTVVPPVASV*GASCAS Trigger: CGAAGCACAAGAGGCCCCTCAGACAGAAGCCACAGG...GGGTACTACTGTCAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCGTGTGGGGAAACCTCTaGCTCCAGAGATCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: RHSECSHGFGCRWRSLLPVWGNL*LQRSHS Trigger: TGAGTGTGATCTCTGGAGTCAGAGGTTTCCCCACAC...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR GCA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCAAGGAGAAGCAGACTTaGTGCAGGTCTGTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: RHSECSHGFGCRWRSLLPKEKQT*CRSVML Trigger: CAGCATGACAGACCTGCAGCAAGTCTGCTTCTCCTT...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CAA 90 bp | GAGAGGGGGATGAAATCTGGACTGCATGAGCGGGGCTCAGAGCTTTaGAAAGGGAGGGCACAGAACACTAGGCAGAGCCAAATTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ERGMKSGLHERGSEL*KGRAQNTRQSQIVL Trigger: CAAGACAATTTGGCTCTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAGTCCAGATTTCATCCCCCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGAGCGGGGCTCAGAGCTTTTGAAAGGGAGGGCACAGAACACTAGGCAGTCCCTCTGGACCAGTTaGCTAAACCACAAACTACCA | + |
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Preference number: 2 (lower is better) Translates to: LHERGSELLKGRAQNTRQSLWTS*LNHKLP Trigger: TGGTAGTTTGTGGTTTAGCCAACTGGTCCAGAGGGA...CTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | TGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACTGACAGTAGTACCCGGTTCAAGGATCACCTaGATCTATGGAGGATCACCT | + |
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Preference number: 2 (lower is better) Translates to: WIWLPMEEPASPRLTVVPGSRIT*IYGGSP Trigger: AGGTGATCCTCCATAGATTCAGGTGATCCTTGAACC...GGGTACTACTGTCAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTAGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGATTCAAACCTGCCTCTaGTCCTCTGCCAACCCGATG | + |
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Preference number: 2 (lower is better) Translates to: PARIISTKAKPIHAIPGWIQTCL*SSANPM Trigger: CATCGGGTTGGCAGAGGAGCAGAGGCAGGTTTGAAT...CCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCTAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR GCA 90 bp | TTACAGAGTTCCCTGTACCTGGAAAAATGCCCAAACCCCCTTCACCTTCACTTCGGCTTCATTCAAACCTaGCTCTGCTCCTCTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LQSSLYLEKCPNPLHLHFGFIQT*LCSSAN Trigger: GTTGGCAGAGGAGCAGAGGCAGGTTTGAATGAAGCC...GAAGTGAAGGTGAAGGGGGTTTGGGCATTTTTCCAGGTACAGGGAACTCTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATCTATGGCTTCCCTCGCTAGGCTaGCCACCCTCATTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: PGYLAAFHERFKDHLNLWLPSLG*PPSFPL Trigger: TAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAG...CCATAGATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCACACAGGTAACTAGTTaGGCGGCTGTGTGTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCTQVTS*AAVCSG Trigger: ACCTGAACACACAGCCGCCCAACTAGTTACCTGTGT...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTAGCAGGCTGGCAGGCTaGGATAGCCTGAGCGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLSRLAG*DSLSVH Trigger: ATGGACGCTCAGGCTATCCCAGCCTGCCAGCCTGCT...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATTGTGGGCTTGCCCTCTaGTACTCAGTGTTACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PKPGYLAAFHERFKDHLNCGLAL*YSVLQG Trigger: ACCCTGTAACACTGAGTACCAGAGGGCAAGCCCACA...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR GCA 90 bp | ATGCTATTCCTGGCTGGTTTTTCTTATGGTGTAGATTCATCTATCCTAAGGAGAAGCTCTGGGTTGGGGTaGAGCTCCGAACTGCAACCG | + |
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Preference number: 2 (lower is better) Translates to: MLFLAGFSYGVDSSILRRSSGLG*SSELQP Trigger: CGGTTGCAGTTCGGAGCTGCACCCCAACCCAGAGCT...TCTCCTTAGGATAGATGAATCTACACCATAAGAAAAACCAGCCAGGAATAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATCTATGGTTTCTCCCCCAGTGCTaGTTCTCAATCCAGATTCGA | + |
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Preference number: 2 (lower is better) Translates to: PGYLAAFHERFKDHLNLWFLPQC*FSIQIR Trigger: TCGAATCTGGATTGAGAATCAGCACTGGGGGAGAAA...CCATAGATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATTCATTCTTACCAGTTTACTAAGTAAACTGACACCTAGAAACAGGAGCCTAGAAGCTCTGGGTTaGGGTGCAGCTCCGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: PRFILTSLLSKLTPRNRSLEALG*GAAPNC Trigger: GCAGTTCGGAGCTGCACCCCAACCCAGAGCTTCTAG...GCTCCTGTTTCTAGGTGTCAGTTTACTTAGTAAACTGGTAAGAATGAATCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CAA 90 bp | GGTTGTGGCCTTCCCTCGCTAGGCTGGCCACCCTCATTTCCTTTATaGCAAAACAAACAAAATAAGATTCGCTGCCATACAAGCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: GCGLPSLGWPPSFPL*QNKQNKIRCHTSKY Trigger: GTATTTGCTTGTATGGCAGCGAATCTTATTTTGTTTGTTTTGCAATAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAGGCCACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGCCCAAACCCCCTTCACCTTCACTTCTGAAATAGTAGGACTAATGAAATCCTCGCAGCTGCTGTaGCCCCAGAAAGGCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: KNAQTPFTFTSEIVGLMKSSQLL*PQKGFI Trigger: AATGAAGCCTTTCTGGGGTCACAGCAGCTGCGAGGA...TTTCATTAGTCCTACTATTTCAGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCTATTCCTGGCTGGTTTTTCTTATGGTGTAGATTCATCTATCCTAAGGAGAAAGGACCACAGTGGCTaGCTCTGCCAGTTAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: MLFLAGFSYGVDSSILRRKDHSG*LCQLAT Trigger: TGTGGCTAACTGGCAGAGTCAGCCACTGTGGTCCTT...TCTCCTTAGGATAGATGAATCTACACCATAAGAAAAACCAGCCAGGAATAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATGGTTCTAAAGATGATTaGCCAACAGACACTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PKPGYLAAFHERFKDHLNGSKDD*PTDTAA Trigger: AGCTGCAGTGTCTGTTGGCCAATCATCTTTAGAACC...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGCCCAAACCCCCTTCACCTTCACTTCTGAAATAGTAGGACTAATGAAAAACTCCATGCAAGGCTaGGGGACACAGGTAACTAGT | + |
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Preference number: 2 (lower is better) Translates to: KNAQTPFTFTSEIVGLMKNSMQG*GTQVTS Trigger: ACTAGTTACCTGTGTCCCTCAGCCTTGCATGGAGTT...TTTCATTAGTCCTACTATTTCAGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR GCA 90 bp | AAAAATGCCCAAACCCCCTTCACCTTCACTTCTGAAATAGTAGGACTAATGAAAGAGAAGCAGACTTGCTaGAGGTCTGTCATGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: KNAQTPFTFTSEIVGLMKEKQTC*RSVMLT Trigger: TGTCAGCATGACAGACCTGCAGCAAGTCTGCTTCTC...TTTCATTAGTCCTACTATTTCAGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CAA 90 bp | ATGCAGGAAAATCTCCATAGTTTATTCGGAGGCTCAAAGAAAGGATaGACTTTCAATAACAGTTTCTCCCCCAGTGCTGATTCTCAATCC | + |
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Preference number: 2 (lower is better) Translates to: MQENLHSLFGGSKKG*TFNNSFSPSADSQS Trigger: GGATTGAGAATCAGCACTGGGGGAGAAACTGTTATTGAAAGTCAATCCTTTCTTTGAGCCTCCGAATAAACTATGGAGATTTTCCTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCTCTGGACCAGTTGGCTAAACCACAAACTACCATTTATTAAATTCCAACTGAGCGTCCATCCTTaGAACTTCTTACAAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: SSLWTSWLNHKLPFIKFQLSVHP*NFLQET Trigger: TGTTTCTTGTAAGAAGTTCCAAGGATGGACGCTCAG...TTGGAATTTAATAAATGGTAGTTTGTGGTTTAGCCAACTGGTCCAGAGGGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTTGTATTTTAAAAATTTaGTTAGGTCTCCATGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLCILKI*LGLHGA Trigger: AGCGCCATGGAGACCTAACCAAATTTTTAAAATACA...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATTCATTCTTACCAGTTTACTAAGTAAACTGACACCTAGAAACAGGAGCAGCAAATTAACTGTTTaGATCTCAACAGCTGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PRFILTSLLSKLTPRNRSSKLTV*ISTAVY Trigger: ATAGACAGCTGTTGAGATCCAAACAGTTAATTTGCT...GCTCCTGTTTCTAGGTGTCAGTTTACTTAGTAAACTGGTAAGAATGAATCTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 72 bp | GATTGCTGCAGACTCTGTGTGTACTGGGCTCAGCGCTaGAGAGGAGGCGCTGGGCTCCGGACACGGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: DCCRLCVYWAQR*RGGAGLRTRCS Trigger: AGAGCACCGTGTCCGGAGCCCAGCGCCTCCTCTTCAGCGCTGAGCCCAGTACACACAGAGTCTGCAGCAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CAA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCAAGAGGAATGTGGGCTaGCCCTCTGGTACTCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: RHSECSHGFGCRWRSLLPKRNVG*PSGTQC Trigger: ACACTGAGTACCAGAGGGCAAGCCCACATTCCTCTT...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR TCA 72 bp | CACCTAGAAACAGGAGCAGCTAAGGACCACAGTGGCTaGCTCTGCCAGTTAGCCACAGATCACAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: HLETGAAKDHSG*LCQLATDHSRL Trigger: CAGCCTGCTGTGATCTGTGGCTAACTGGCAGAGTCAGCCACTGTGGTCCTTAGCTGCTCCTGTTTCTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | TGCCAGTTAGCCACAGATCACAGCAGGCTGGCAGGCTaGGATAGCCTGAGCGTCCATCCTTGGAACTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: CQLATDHSRLAG*DSLSVHPWNFL Trigger: TAAGAAGTTCCAAGGATGGACGCTCAGGCTATCCCAGCCTGCCAGCCTGCTGTGATCTGTGGCTAACTGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | GGACTAACCAAGGCATTCGGAGTGCTCACATGGATTTaGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: GLTKAFGVLTWI*LPMEEPASPRL Trigger: CAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCTTGGTTAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR GCA 72 bp | TCATTCAAACCTGCCTCTGCTCCTCTGCCAACCCGATaGTGTTTCCTTAGTTGCCTCTCGTCCCAAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SFKPASAPLPTR*CFLSCLSSQGV Trigger: GACACCTTGGGACGAGAGGCAACTAAGGAAACAGCATCGGGTTGGCAGAGGAGCAGAGGCAGGTTTGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | GTCATAGGACTAACCAAGGCATTCGGAGTGCTCACATaGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VIGLTKAFGVLT*IWLPMEEPASP Trigger: TGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCTTGGTTAGTCCTATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR GCA 72 bp | CCAGAAAGGCTTCATTCAAACCTGCCTCTGCTCCTCTaGCAACCCGATGCTGTTTCCTTAGTTGCCTCTCGT | + |
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Preference number: 3 (lower is better) Translates to: PERLHSNLPLLL*QPDAVSLVASR Trigger: ACGAGAGGCAACTAAGGAAACAGCATCGGGTTGGCAGAGGAGCAGAGGCAGGTTTGAATGAAGCCTTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CAA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATTGTCTGAGGGGCCTCTaGTGCTTCGTGGCATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PKPGYLAAFHERFKDHLNCLRGL*CFVAWS Trigger: GCTCCATGCCACGAAGCACAAGAGGCCCCTCAGACA...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | GTAACTAGTTGGGCGGCTGTGTGTTCAGGTGATTGTTaGGACCAAAAGGAGAAGCAGACTTGCTGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: VTSWAAVCSGDC*DQKEKQTCCRS Trigger: AGACCTGCAGCAAGTCTGCTTCTCCTTTTGGTCCCAACAATCACCTGAACACACAGCCGCCCAACTAGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | CTCCGAACTGCAACCGGTCTAATATGTGACAGGGTATaGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LRTATGLICDRV*AVCVTEFPVPG Trigger: TCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCACATATTAGACCGGTTGCAGTTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR CCA 72 bp | TGCTTCCCCAAGACTGACAGTAGTACCCAAGAGTCCTaGTATATGTATGTGAAAAGACCTCCCTGGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: CFPKTDSSTQES*YMYVKRPPWVL Trigger: CAGGACCCAGGGAGGTCTTTTCACATACATATACCAGGACTCTTGGGTACTACTGTCAGTCTTGGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| 3UTR-3UTR CAA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCAGGTCTCCATGGCGCTaGAAGTACATAAGTGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCRSPWR*KYISVC Trigger: GCAGACACTTATGTACTTCAAGCGCCATGGAGACCT...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATGAGCGGGGCTCAGAGCTTTTGAAAGGGAGGGCACAGAACACTAGGCAGATGTATTTTAAAAATTaGGTTAGGTCTCCATGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: LHERGSELLKGRAQNTRQMYFKN*VRSPWR Trigger: GCGCCATGGAGACCTAACCAAATTTTTAAAATACAT...CTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATAGCTCTCCAAGGCACTaGGAGAGGGGGATGAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: PKPGYLAAFHERFKDHLNSSPRH*ERGMKS Trigger: AGATTTCATCCCCCTCTCCAAGTGCCTTGGAGAGCT...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CCA 72 bp | GGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTaGAAAAATGCCCAAACCCCCTTCACCTTCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GMGCLCYRVPCT*KNAQTPFTFTS Trigger: AGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTAGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGGTCTATGAAGATGCTTaGTCCTGTGGCTTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PARIISTKAKPIHAIPGWVYEDA*SCGFCL Trigger: CAGACAGAAGCCACAGGACAAAGCATCTTCATAGAC...CCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCTAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR TCA 72 bp | CTGACAGTAGTACCCAAGAGTCCTGGTATATGTATGTaGAAAGACCTCCCTGGGTCCTGGATCTTAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTVVPKSPGICM*KDLPGSWILRD Trigger: GTCTCTTAAGATCCAGGACCCAGGGAGGTCTTTTCACATACATATACCAGGACTCTTGGGTACTACTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CCA 72 bp | ACTGAAGTAGCAGAAGAGGAATGTGGGCTTGCCCTCTaGTACTCAGTGTTACAGGGTTCTAAAGATGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: TEVAEEECGLAL*YSVLQGSKDDW Trigger: CCAATCATCTTTAGAACCCTGTAACACTGAGTACCAGAGGGCAAGCCCACATTCCTCTTCTGCTACTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCGCAAATACTAGTGATTaGGTGATTGCTGCAGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCANTSD*VIAADS Trigger: AGAGTCTGCAGCAATCACCAAATCACTAGTATTTGC...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR TCA 72 bp | CAAGTCTCCCAAACCAGGCTACTTAGCAGCTTTTCATaGACGGTTCAAGGATCACCTGAATCTATGGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QVSQTRLLSSFS*TVQGSPESMED Trigger: ATCCTCCATAGATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGGAGACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR TCA 72 bp | AAGCAAATTAACTGTTTGGATCTCAACAGCTGTCTATaGAGATGCTTTGTCCTGTGGCTTCTGTCTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KQINCLDLNSCL*RCFVLWLLSEG Trigger: CCCCTCAGACAGAAGCCACAGGACAAAGCATCTTCATAGACAGCTGTTGAGATCCAAACAGTTAATTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR GCA 72 bp | TCCCATCTCAATAGCTCAACATTCCACACTTTCCTATaGAGGAAAATCTCCATAGTTTATTCGGAGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHLNSSTFHTFL*RKISIVYSEAQ Trigger: TTGAGCCTCCGAATAAACTATGGAGATTTTCCTGCATAGGAAAGTGTGGAATGTTGAGCTATTGAGATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR TCA 72 bp | ATCTCCATAGTTTATTCGGAGGCTCAAAGAAAGGATTaGCTTTCAATAACAGTTTCTCCCCCAGTGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ISIVYSEAQRKD*LSITVSPPVLI Trigger: AATCAGCACTGGGGGAGAAACTGTTATTGAAAGTCAATCCTTTCTTTGAGCCTCCGAATAAACTATGGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | GCAGACTCTGTGTGTACTGGGCTCAGCGCTGAAGAGGAGGCGCTGGGCTCCGGACACAGGTCATTGCTGTaGAGACCCAGTGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADSVCTGLSAEEEALGSGHRSLL*RPSGHR Trigger: CCTGTGGCCACTGGGTCTGCACAGCAATGACCTGTG...TCCGGAGCCCAGCGCCTCCTCTTCAGCGCTGAGCCCAGTACACACAGAGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | GCAGACTCTGTGTGTACTGGGCTCAGCGCTGAAGAGGAGGCGCTGGGCTCCGGAAGTCTCAGCTCCATCTaGATAGGTTTCGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADSVCTGLSAEEEALGSGSLSSI*IGFVLQ Trigger: CTGGAGGACGAAACCTATGCAGATGGAGCTGAGACT...TCCGGAGCCCAGCGCCTCCTCTTCAGCGCTGAGCCCAGTACACACAGAGTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | GCAGACTCTGTGTGTACTGGGCTCAGCGCTGAAGAGGAGGCGCTGGGCTCCGGAAACTGGGCTGGCAGATaGACTCGCAGACTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADSVCTGLSAEEEALGSGNWAGR*TRRLLF Trigger: GAAAAGAAGTCTGCGAGTCCATCTGCCAGCCCAGTT...TCCGGAGCCCAGCGCCTCCTCTTCAGCGCTGAGCCCAGTACACACAGAGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | CTGCATGAGCGGGGCTCAGAGCTTTTGAAAGGGAGGGCACAGAACACTAGGCAGGTCTGGACCCCCTTCTaGTTCTTTCCATCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHERGSELLKGRAQNTRQVWTPF*FFPSQV Trigger: GACCTGTGATGGAAAGAATCAGAAGGGGGTCCAGAC...CTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CAA 72 bp | GATGATGGCATTGCTGCTGTGAGCTCTCCAAGGCACTaGGAGAGGGGGATGAAATCTGGACTGCATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DDGIAAVSSPRH*ERGMKSGLHER Trigger: CCGCTCATGCAGTCCAGATTTCATCCCCCTCTCCAAGTGCCTTGGAGAGCTCACAGCAGCAATGCCATCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCAGGCAGGCATCTCTATaGAGTTCACAGTGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHSECSHGFGCRWRSLLPRQASL*SSQWLR Trigger: CCTCAACCACTGTGAACTTCATAGAGATGCCTGCCT...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCGGATCTTGGATCCAGTaGGGCAGGCATCTCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSECSHGFGCRWRSLLPGSWIQ*GRHLYE Trigger: TTCATAGAGATGCCTGCCTCACTGGATCCAAGATCC...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCTAGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGCTTCCAGCCACTGGATaGGGCGCCGTCGGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PARIISTKAKPIHAIPGWLPATG*GAVGAH Trigger: ATGAGCTCCGACGGCGCCTCATCCAGTGGCTGGAAG...CCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCTAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCTAGTTACACTGAAGTAGCAGAAGAGGAATGTGGGCTTGCCCTCTGGAGCAGACAACTGGGCTaGCAGATGGACTCGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SCPSYTEVAEEECGLALWSRQLG*QMDSQT Trigger: AGTCTGCGAGTCCATCTGCCAGCCCAGTTGTCTGCT...CCAGAGGGCAAGCCCACATTCCTCTTCTGCTACTTCAGTGTAACTAGGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | TGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACTGACAGTAGTACCCTTGATAGCAGACAACTaGGCTGGCAGATGGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WIWLPMEEPASPRLTVVPLIADN*AGRWTR Trigger: GCGAGTCCATCTGCCAGCCCAGTTGTCTGCTATCAA...GGGTACTACTGTCAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTTGGGCGGCTGTGTGTTCAGGTGATTGTTGGGACCAAAAGGAGGCTGTGCAGACCCAGTaGCCACAGGAACAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSWAAVCSGDCWDQKEAVQTQ*PQEQTQ Trigger: CTGTGTCTGTTCCTGTGGCCACTGGGTCTGCACAGC...CTCCTTTTGGTCCCAACAATCACCTGAACACACAGCCGCCCAACTAGTTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CAA 72 bp | CTAACCAAGGCATTCGGAGTGCTCACATGGATTTGGTaGCCGATGGAGGAGCCTGCTTCCCCAAGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTKAFGVLTWIW*PMEEPASPRLT Trigger: TGTCAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCTTGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CAA 72 bp | AGGACTAACCAAGGCATTCGGAGTGCTCACATGGATTaGGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RTNQGIRSAHMD*VADGGACFPKT Trigger: AGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCTTGGTTAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| 3UTR CAA 72 bp | ATGAAATCTGGACTGCATGAGCGGGGCTCAGAGCTTTaGAAAGGGAGGGCACAGAACACTAGGCAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MKSGLHERGSEL*KGRAQNTRQSQ Trigger: TTGGCTCTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAGTCCAGATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGGCCTTCCCTCGCTAGGCTGGCCACCCTCATTTCCTTTATTGCAAAACTGGTCTTTTCTGCTGTaGCCTGGTGCTTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GCGLPSLGWPPSFPLLQNWSFLL*PGASGV Trigger: AACTCCAGAAGCACCAGGGCACAGCAGAAAAGACCA...GTTTTGCAATAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAGGCCACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCCTAGTTACACTGAAGTAGCAGAAGAGGAATGTGGGCTTGCCCTCTGGCTTCTTGGTCTTTTCTaGTGTGCCCTGGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCPSYTEVAEEECGLALWLLGLF*CALVLL Trigger: CAGAAGCACCAGGGCACAGCAGAAAAGACCAAGAAG...CCAGAGGGCAAGCCCACATTCCTCTTCTGCTACTTCAGTGTAACTAGGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGGCCTTCCCTCGCTAGGCTGGCCACCCTCATTTCCTTTATTGCAAAACAGAGAACCAGCCATCTaGAATGATCTCAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLPSLGWPPSFPLLQNREPAI*NDLSFQ Trigger: CTGGAAGCTGAGATCATTCCAGATGGCTGGTTCTCT...GTTTTGCAATAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAGGCCACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | TTACAGAGTTCCCTGTACCTGGAAAAATGCCCAAACCCCCTTCACCTTCACTTCCATCAGACAGTTCAATaGGGGCGTCAACACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSSLYLEKCPNPLHLHFHQTVQ*GRQHRG Trigger: GCCTCTGTGTTGACGCCCTCATTGAACTGTCTGATG...GAAGTGAAGGTGAAGGGGGTTTGGGCATTTTTCCAGGTACAGGGAACTCTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTTCAGCTTCCAGCCACTaGATGAGGCGCCGTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLSASSH*MRRRRS Trigger: GCTCCGACGGCGCCTCATCCAGTGGCTGGAAGCTGA...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCTAGTTACACTGAAGTAGCAGAAGAGGAATGTGGGCTTGCCCTCTGGCACTTGAGGAACTCTTaGAAGCTGAGTTTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPSYTEVAEEECGLALWHLRNS*KLSFQS Trigger: TGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTG...CCAGAGGGCAAGCCCACATTCCTCTTCTGCTACTTCAGTGTAACTAGGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCTAGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGCACACAGGCCTCTTGTaGGGTTTGCATTGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PARIISTKAKPIHAIPGWHTGLL*GLHCSM Trigger: CATTGAGCAATGCAAACCTCACAAGAGGCCTGTGTG...CCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCTAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCTAGGATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGGCCTCTTGTGAGGTTTaGATTGCTCAATGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PARIISTKAKPIHAIPGWASCEV*IAQCRG Trigger: GCCTCTGCATTGAGCAATGCAAACCTCACAAGAGGC...CCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATCCTAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATTCGGAGTGCTCACATGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCAGACTTCTTTTCTTTaGAGTGCCCATCATAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSECSHGFGCRWRSLLPQTSFL*SAHHNQ Trigger: TTGATTATGATGGGCACTGCAAAGAAAAGAAGTCTG...GGGAAGCAGGCTCCTCCATCGGCAACCAAATCCATGTGAGCACTCCGAATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATGGAACTCTTGGAAGCTaGGTTTCCAGTCAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKPGYLAAFHERFKDHLNGTLGS*VSSQRS Trigger: AGAACGCTGACTGGAAACTCAGCTTCCAAGAGTTCC...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATAGGTCTTGCCATTACTaGCACACACAGGCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPGYLAAFHERFKDHLNRSCHY*HTQASC Trigger: ACAAGAGGCCTGTGTGTGGCAGTAATGGCAAGACCT...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCATTTCAGGAATTCACTaGAGTCCAGGTGAGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCISGIH*SPGESR Trigger: GCGACTCTCACCTGGACTCCAGTGAATTCCTGAAAT...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTCTGGACCAGTTGGCTAAACCACAAACTACCATTTATTAAATTCCAATCCATCACAGGTCATTaGTGTGCAGACCCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLWTSWLNHKLPFIKFQSITGH*CADPVA Trigger: GGCCACTGGGTCTGCACAGCAATGACCTGTGATGGA...TTGGAATTTAATAAATGGTAGTTTGTGGTTTAGCCAACTGGTCCAGAGGGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCCTCCACAAAACACATTaGCGCAGATCTTGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCLHKTH*RRSWIC Trigger: GCAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAG...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR TCA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTACCAGCCATCTGGAATaGTCTCAGCTTCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLTSHLE*SQLPAT Trigger: AGTGGCTGGAAGCTGAGATCATTCCAGATGGCTGGT...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCTCTGGACCAGTTGGCTAAACCACAAACTACCATTTATTAAATTCCAAGTGCCCTGGTGCTTCTaGAGTTCCTGGACATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLWTSWLNHKLPFIKFQVPWCF*SSWTYP Trigger: AGGATATGTCCAGGAACTCCAGAAGCACCAGGGCAC...TTGGAATTTAATAAATGGTAGTTTGTGGTTTAGCCAACTGGTCCAGAGGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGGAAAAATGCCCAAACCCCCTTCACCTTCACTTCTGAAATAGTAGGACTATGGTGTTCACCTTCTTaGTCTTTTCTGCTGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWKNAQTPFTFTSEIVGLWCSPS*SFLLCP Trigger: AGGGCACAGCAGAAAAGACCAAGAAGGTGAACACCA...TAGTCCTACTATTTCAGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTTCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTATTCCTGGCTGGTTTTTCTTATGGTGTAGATTCATCTATCCTAAGGAGAAACAGACACAGCGATTaGAGTCCACCTCAGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLFLAGFSYGVDSSILRRNRHSD*SPPQSQ Trigger: CTGAGACTGAGGTGGACTGCAATCGCTGTGTCTGTT...TCTCCTTAGGATAGATGAATCTACACCATAAGAAAAACCAGCCAGGAATAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCCCAAACCCCCTTCACCTTCACTTCTGAAATAGTAGGACTAATGAAATGCTTCTGGAGTTCCTaGACATATCCTGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNAQTPFTFTSEIVGLMKCFWSS*TYPVFS Trigger: GGAGAAGACAGGATATGTCCAGGAACTCCAGAAGCA...TTTCATTAGTCCTACTATTTCAGAAGTGAAGGTGAAGGGGGTTTGGGCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS-3UTR GCA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTGTTGTTCTCCTGATCTaGATAAGTGGTGATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLVVLLI*ISGDVD Trigger: ATCAACATCACCACTTATGCAGATCAGGAGAACAAC...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
||
| CDS CCA 90 bp | GAGGCGCCGTCGGAGCTCATCGCGGTTAGCTTGATAGCAGACAACTaGGCTGGCAGATGGACTCGCAGACTTCTTTTCTTTGCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAPSELIAVSLIADN*AGRWTRRLLFFAVP Trigger: GGGCACTGCAAAGAAAAGAAGTCTGCGAGTCCATCTGCCAGCCCAGTTGTCTGCTATCAAGCTAACCGCGATGAGCTCCGACGGCGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS TCA 90 bp | GTTTGCATTGCTCAATGCAGAGGCACGTGGGCTCCCCCTTCTCTGTaGCGGCACATTCCCTGCCAGCTCCACAAAACACATTGGCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VCIAQCRGTWAPPSL*RHIPCQLHKTHWRR Trigger: TCTGCGCCAATGTGTTTTGTGGAGCTGGCAGGGAATGTGCCGTCACAGAGAAGGGGGAGCCCACGTGCCTCTGCATTGAGCAATGCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | CTGCATGAGCGGGGCTCAGAGCTTTTGAAAGGGAGGGCACAGAACACTAGGCAGGAACAGACACAGCGATaGCAGTCCACCTCAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LHERGSELLKGRAQNTRQEQTQR*QSTSVS Trigger: TGAGACTGAGGTGGACTGCAATCGCTGTGTCTGTTC...CTGCCTAGTGTTCTGTGCCCTCCCTTTCAAAAGCTCTGAGCCCCGCTCATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 90 bp | GGAACAGACACAGCGATTGCAGTCCACCTCAGTCTCAGCTCCATCTaGATAGGTTTCGTCCTCCAGGGCACACTTCTTCTCAGGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GTDTAIAVHLSLSSI*IGFVLQGTLLLRRV Trigger: AACCCTCCTGAGAAGAAGTGTGCCCTGGAGGACGAAACCTATGCAGATGGAGCTGAGACTGAGGTGGACTGCAATCGCTGTGTCTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 90 bp | TCATTGCTGTGCAGACCCAGTGGCCACAGGAACAGACACAGCGATTaGAGTCCACCTCAGTCTCAGCTCCATCTGCATAGGTTTCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLLCRPSGHRNRHSD*SPPQSQLHLHRFRP Trigger: AGGACGAAACCTATGCAGATGGAGCTGAGACTGAGGTGGACTGCAATCGCTGTGTCTGTTCCTGTGGCCACTGGGTCTGCACAGCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | TGGATTTGGTTGCCGATGGAGGAGCCTGCTTCCCCAAGACTGACAGTAGTACCCGCGCAGATCTTGGATTaGCTTCTAGGTTCCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: WIWLPMEEPASPRLTVVPAQILD*LLGSSS Trigger: CGAGGAGGAACCTAGAAGCAAATCCAAGATCTGCGC...GGGTACTACTGTCAGTCTTGGGGAAGCAGGCTCCTCCATCGGCAACCAAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CCA 90 bp | GGTTTCGTCCTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAGGATaGGTTGAGGCACTTGAGGAACTCTTGGAAGCTGAGTTTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GFVLQGTLLLRRVEG*VEALEELLEAEFPV Trigger: GACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAGGACGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | GGTTGTGGCCTTCCCTCGCTAGGCTGGCCACCCTCATTTCCTTTATTGCAAAACGGGTTGAAGGATGGGTaGAGGCACTTGAGGAACTCT | + |
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Preference number: 5 (lower is better) Translates to: GCGLPSLGWPPSFPLLQNGLKDG*RHLRNS Trigger: AGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCC...GTTTTGCAATAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAGGCCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | GGTTGTGGCCTTCCCTCGCTAGGCTGGCCACCCTCATTTCCTTTATTGCAAAACTTGGTGTTCACCTTCTaGGTCTTTTCTGCTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GCGLPSLGWPPSFPLLQNLVFTF*VFSAVP Trigger: GGGCACAGCAGAAAAGACCAAGAAGGTGAACACCAA...GTTTTGCAATAAAGGAAATGAGGGTGGCCAGCCTAGCGAGGGAAGGCCACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | CCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATCTATGGTTCCATCACAGGTCATaGCTGTGCAGACCCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: PGYLAAFHERFKDHLNLWFHHRS*LCRPSG Trigger: GCCACTGGGTCTGCACAGCAATGACCTGTGATGGAA...CCATAGATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | GTGACAGGGTATGGGCTGTTTGTGTTACAGAGTTCCCTGTACCTGGAAAAATGCCTTGTGAGGTTTGCATaGCTCAATGCAGAGGCACGT | + |
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Preference number: 5 (lower is better) Translates to: VTGYGLFVLQSSLYLEKCLVRFA*LNAEAR Trigger: ACGTGCCTCTGCATTGAGCAATGCAAACCTCACAAG...GCATTTTTCCAGGTACAGGGAACTCTGTAACACAAACAGCCCATACCCTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | CCCAAACCAGGCTACTTAGCAGCTTTTCATGAACGGTTCAAGGATCACCTGAATGATGGGTTGAGGCACTaGAGGAACTCTTGGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PKPGYLAAFHERFKDHLNDGLRH*RNSWKL Trigger: CAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATC...ATTCAGGTGATCCTTGAACCGTTCATGAAAAGCTGCTAAGTAGCCTGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 90 bp | GGCGTCAACACAGAGGCTTCTGAGCAGTTTGTTGTTCTCCTGATCTaGATAAGTGGTGATGTTGATGGCTGTTTCATTCTGCTCCACGAA | + |
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Preference number: 5 (lower is better) Translates to: GVNTEASEQFVVLLI*ISGDVDGCFILLHE Trigger: TTCGTGGAGCAGAATGAAACAGCCATCAACATCACCACTTATGCAGATCAGGAGAACAACAAACTGCTCAGAAGCCTCTGTGTTGACGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | GATCATTTCAACCAAAGCAAAACCCATCCATGCTATTCCTGGCTGGTTTTTCTTGCACTTGAGGAACTCTaGGAAGCTGAGTTTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: DHFNQSKTHPCYSWLVFLALEEL*EAEFPV Trigger: GACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGC...AAGAAAAACCAGCCAGGAATAGCATGGATGGGTTTTGCTTTGGTTGAAATGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS-3UTR CAA 90 bp | ATGCTATTCCTGGCTGGTTTTTCTTATGGTGTAGATTCATCTATCCTAAGGAGAGCTCCACAAAACACATaGGCGCAGATCTTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: MLFLAGFSYGVDSSILRRAPQNT*AQILDL Trigger: CAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAGC...TCTCCTTAGGATAGATGAATCTACACCATAAGAAAAACCAGCCAGGAATAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CCA 72 bp | CAGATCTTGGATTTGCTTCTAGGTTCCTCCTCGCCGTaGACCAGGGCGATGGTCACCAGCGAGAGCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QILDLLLGSSSP*TRAMVTSESAS Trigger: GCTGGCGCTCTCGCTGGTGACCATCGCCCTGGTCCACGGCGAGGAGGAACCTAGAAGCAAATCCAAGATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | CTGGATGAGGCGCCGTCGGAGCTCATCGCGGTTAGCTaGATAGCAGACAACTGGGCTGGCAGATGGACTCGC | + |
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Preference number: 6 (lower is better) Translates to: LDEAPSELIAVS*IADNWAGRWTR Trigger: GCGAGTCCATCTGCCAGCCCAGTTGTCTGCTATCAAGCTAACCGCGATGAGCTCCGACGGCGCCTCATCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 90 bp | CATTCCCTGCCAGCTCCACAAAACACATTGGCGCAGATCTTGGATTaGCTTCTAGGTTCCTCCTCGCCGTGGACCAGGGCGATGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: HSLPAPQNTLAQILD*LLGSSSPWTRAMVT Trigger: GGTGACCATCGCCCTGGTCCACGGCGAGGAGGAACCTAGAAGCAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAGCTGGCAGGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 90 bp | ACGGCACATTCCCTGCCAGCTCCACAAAACACATTGGCGCAGATCTaGGATTTGCTTCTAGGTTCCTCCTCGCCGTGGACCAGGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: TAHSLPAPQNTLAQI*DLLLGSSSPWTRAM Trigger: CATCGCCCTGGTCCACGGCGAGGAGGAACCTAGAAGCAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAGCTGGCAGGGAATGTGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | TGCCATTACTGCCACACACAGGCCTCTTGTGAGGTTTaGATTGCTCAATGCAGAGGCACGTGGGCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: CHYCHTQASCEV*IAQCRGTWAPP Trigger: AGGGGGAGCCCACGTGCCTCTGCATTGAGCAATGCAAACCTCACAAGAGGCCTGTGTGTGGCAGTAATGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | TGCAGACCCAGTGGCCACAGGAACAGACACAGCGATTaGAGTCCACCTCAGTCTCAGCTCCATCTGCATAGG | + |
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Preference number: 6 (lower is better) Translates to: CRPSGHRNRHSD*SPPQSQLHLHR Trigger: CCTATGCAGATGGAGCTGAGACTGAGGTGGACTGCAATCGCTGTGTCTGTTCCTGTGGCCACTGGGTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | CCAGCTCCACAAAACACATTGGCGCAGATCTTGGATTaGCTTCTAGGTTCCTCCTCGCCGTGGACCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PAPQNTLAQILD*LLGSSSPWTRA Trigger: CGCCCTGGTCCACGGCGAGGAGGAACCTAGAAGCAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | TCCCTGCCAGCTCCACAAAACACATTGGCGCAGATCTaGGATTTGCTTCTAGGTTCCTCCTCGCCGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: SLPAPQNTLAQI*DLLLGSSSPWT Trigger: GGTCCACGGCGAGGAGGAACCTAGAAGCAAATCCAAGATCTGCGCCAATGTGTTTTGTGGAGCTGGCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 90 bp | TCGTCCTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAGGATGGGTaGAGGCACTTGAGGAACTCTTGGAAGCTGAGTTTCCAGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSSRAHFFSGGLKDG*RHLRNSWKLSFQSA Trigger: CGCTGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAGGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | ACAGCGATTGCAGTCCACCTCAGTCTCAGCTCCATCTaGATAGGTTTCGTCCTCCAGGGCACACTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TAIAVHLSLSSI*IGFVLQGTLLL Trigger: GAGAAGAAGTGTGCCCTGGAGGACGAAACCTATGCAGATGGAGCTGAGACTGAGGTGGACTGCAATCGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | CCCCCTTCTGATTCTTTCCATCACAGGTCATTGCTGTaGAGACCCAGTGGCCACAGGAACAGACACAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PPSDSFHHRSLL*RPSGHRNRHSD Trigger: ATCGCTGTGTCTGTTCCTGTGGCCACTGGGTCTGCACAGCAATGACCTGTGATGGAAAGAATCAGAAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | CTGGACCCCCTTCTGATTCTTTCCATCACAGGTCATTaGTGTGCAGACCCAGTGGCCACAGGAACAGACACA | + |
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Preference number: 6 (lower is better) Translates to: LDPLLILSITGH*CADPVATGTDT Trigger: TGTGTCTGTTCCTGTGGCCACTGGGTCTGCACAGCAATGACCTGTGATGGAAAGAATCAGAAGGGGGTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CCA 72 bp | CTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAGGATaGGTTGAGGCACTTGAGGAACTCTTGGAAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LQGTLLLRRVEG*VEALEELLEAE Trigger: CTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | TCTGGACCCCCTTCTGATTCTTTCCATCACAGGTCATaGCTGTGCAGACCCAGTGGCCACAGGAACAGACAC | + |
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Preference number: 6 (lower is better) Translates to: SGPPSDSFHHRS*LCRPSGHRNRH Trigger: GTGTCTGTTCCTGTGGCCACTGGGTCTGCACAGCAATGACCTGTGATGGAAAGAATCAGAAGGGGGTCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CCA 72 bp | GCGGTTAGCTTGATAGCAGACAACTGGGCTGGCAGATaGACTCGCAGACTTCTTTTCTTTGCAGTGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: AVSLIADNWAGR*TRRLLFFAVPI Trigger: GATGGGCACTGCAAAGAAAAGAAGTCTGCGAGTCCATCTGCCAGCCCAGTTGTCTGCTATCAAGCTAACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 90 bp | AGGGCACACTTCTTCTCAGGAGGGTTGAAGGATGGGTTGAGGCACTaGAGGAACTCTTGGAAGCTGAGTTTCCAGTCAGCGTTCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: RAHFFSGGLKDGLRH*RNSWKLSFQSAFSS Trigger: TGATGAGAACGCTGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAAGTGTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | TTCTTCTCAGGAGGGTTGAAGGATGGGTTGAGGCACTaGAGGAACTCTTGGAAGCTGAGTTTCCAGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: FFSGGLKDGLRH*RNSWKLSFQSA Trigger: CGCTGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | AGGGCACACTTCTTCTCAGGAGGGTTGAAGGATGGGTaGAGGCACTTGAGGAACTCTTGGAAGCTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RAHFFSGGLKDG*RHLRNSWKLSF Trigger: GAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAGAAGTGTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 72 bp | AGGGTTGAAGGATGGGTTGAGGCACTTGAGGAACTCTaGGAAGCTGAGTTTCCAGTCAGCGTTCTCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: RVEGWVEALEEL*EAEFPVSVLIR Trigger: TCTGATGAGAACGCTGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS CAA 90 bp | CTTCTCAGGAGGGTTGAAGGATGGGTTGAGGCACTTGAGGAACTCTaGGAAGCTGAGTTTCCAGTCAGCGTTCTCATCAGACAGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: LLRRVEGWVEALEEL*EAEFPVSVLIRQFN Trigger: ATTGAACTGTCTGATGAGAACGCTGACTGGAAACTCAGCTTCCAAGAGTTCCTCAAGTGCCTCAACCCATCCTTCAACCCTCCTGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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| CDS GCA 72 bp | ACAGAGGCTTCTGAGCAGTTTGTTGTTCTCCTGATCTaGATAAGTGGTGATGTTGATGGCTGTTTCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: TEASEQFVVLLI*ISGDVDGCFIL Trigger: CAGAATGAAACAGCCATCAACATCACCACTTATGCAGATCAGGAGAACAACAAACTGCTCAGAAGCCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114763.3 |
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