RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FSIP2L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079606

Ensembl transcript IDs: ENSMUST00000114928.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AACTTGGTTGCTTTTGAATTGAAGAAGCTGTTTCACTTGGCCTTTTaGTTTCAGAAGTACTTTCTTCCCGCTTTCCTTCTTTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: NLVAFELKKLFHLAF*FQKYFLPAFLLYFP
Trigger: AGGAAAGTAAAGAAGGAAAGCGGGAAGAAAGTACTTCTGAAAGCAAAAGGCCAAGTGAAACAGCTTCTTCAATTCAAAAGCAACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CCA 90 bp GTCATAAGTGACATCTCCTTGAATTGCCAATCCGCTTCAACTTCTTaGTGTAGGTTTAGTTTTCTTTTAACATCATCCCAATGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VISDISLNCQSASTS*CRFSFLLTSSQCCL
Trigger: CAGACAACATTGGGATGATGTTAAAAGAAAACTAAACCTACACCAAGAAGTTGAAGCGGATTGGCAATTCAAGGAGATGTCACTTATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS TCA 90 bp AGCATTACTTGTTTCTTTCGGTTAATTTCTTCTCGGATTTTCCGATaGTGTTCTTCAACTTTTGTCTCTCTCTTAACTTCGTCTCCGATC +
Preference number: 5 (lower is better)
Translates to: SITCFFRLISSRIFR*CSSTFVSLLTSSPI
Trigger: GATCGGAGACGAAGTTAAGAGAGAGACAAAAGTTGAAGAACATCATCGGAAAATCCGAGAAGAAATTAACCGAAAGAAACAAGTAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp TTACTACAGGTATCTTTGTTGTTTGTTATGTCGCCGGAAGCTGCTTaGGAGGCAGCAGCTTCGGCAGCCTTTATACAGTTGCTTAGGTAC +
Preference number: 6 (lower is better)
Translates to: LLQVSLLFVMSPEAA*EAAASAAFIQLLRY
Trigger: GTACCTAAGCAACTGTATAAAGGCTGCCGAAGCTGCTGCCTCCAAAGCAGCTTCCGGCGACATAACAAACAACAAAGATACCTGTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp TTTGGAATGGTAGGTTTCTGTTTCTTGTTACTACAGGTATCTTTGTaGTTTGTTATGTCGCCGGAAGCTGCTTTGGAGGCAGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: FGMVGFCFLLLQVSL*FVMSPEAALEAAAS
Trigger: CGAAGCTGCTGCCTCCAAAGCAGCTTCCGGCGACATAACAAACAACAAAGATACCTGTAGTAACAAGAAACAGAAACCTACCATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp GTTTCTGTTTCTTGTTACTACAGGTATCTTTGTTGTTaGTTATGTCGCCGGAAGCTGCTTTGGAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: VSVSCYYRYLCC*LCRRKLLWRQQ
Trigger: CTGCTGCCTCCAAAGCAGCTTCCGGCGACATAACAAACAACAAAGATACCTGTAGTAACAAGAAACAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp ATCTTTGGAATGGTAGGTTTCTGTTTCTTGTTACTACAGGTATCTTaGTTGTTTGTTATGTCGCCGGAAGCTGCTTTGGAGGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: IFGMVGFCFLLLQVS*LFVMSPEAALEAAA
Trigger: AGCTGCTGCCTCCAAAGCAGCTTCCGGCGACATAACAAACAACAAAGATACCTGTAGTAACAAGAAACAGAAACCTACCATTCCAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp CTTCATGTGTTGGAATATCATGACATGGTTGTCTGGAAAGTGCAGTaGATTGCAGACAGTGAGATGGATCAGGAGCTCTGTCATGTGAAT +
Preference number: 6 (lower is better)
Translates to: LHVLEYHDMVVWKVQ*IADSEMDQELCHVN
Trigger: ATTCACATGACAGAGCTCCTGATCCATCTCACTGTCTGCAATCAACTGCACTTTCCAGACAACCATGTCATGATATTCCAACACATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS TCA 72 bp CTCTCTCTTAACTTCGTCTCCGATCTTTGTCATAAGTaGCATCTCCTTGAATTGCCAATCCGCTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: LSLNFVSDLCHK*HLLELPIRFNF
Trigger: GAAGTTGAAGCGGATTGGCAATTCAAGGAGATGTCACTTATGACAAAGATCGGAGACGAAGTTAAGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS GCA 72 bp CTTGTTCTCCTTGTACTGGGTGAAGTCAATATTGAGTaGAGATTGTCTTCCATTGGTTTCTGGTCCGTGAAA +
Preference number: 6 (lower is better)
Translates to: LVLLVLGEVNIE*RLSSIGFWSVK
Trigger: TTTCACGGACCAGAAACCAATGGAAGACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAGAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CCA 72 bp GGTCCTCATCAAAACTGGTCCTTGTCGTTTGTGAGATaGATTTTGATTCCCTCGATTCTTGCATCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: GPHQNWSLSFVR*ILIPSILASVF
Trigger: AAAGACTGATGCAAGAATCGAGGGAATCAAAATCCATCTCACAAACGACAAGGACCAGTTTTGATGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CCA 72 bp ACATTCTCTGGTCGGAAACACTTGTTCTCCTTGTACTaGGTGAAGTCAATATTGAGTGCAGATTGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: TFSGRKHLFSLY*VKSILSADCLP
Trigger: TGGAAGACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAGAACAAGTGTTTCCGACCAGAGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp CTCCTTGTACTGGGTGAAGTCAATATTGAGTGCAGATaGTCTTCCATTGGTTTCTGGTCCGTGAAACTTGTT +
Preference number: 6 (lower is better)
Translates to: LLVLGEVNIECR*SSIGFWSVKLV
Trigger: AACAAGTTTCACGGACCAGAAACCAATGGAAGACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp AAACACTTGTTCTCCTTGTACTGGGTGAAGTCAATATaGAGTGCAGATTGTCTTCCATTGGTTTCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: KHLFSLYWVKSI*SADCLPLVSGP
Trigger: CGGACCAGAAACCAATGGAAGACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAGAACAAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp ATGGTAGGTTTCTGTTTCTTGTTACTACAGGTATCTTaGTTGTTTGTTATGTCGCCGGAAGCTGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: MVGFCFLLLQVS*LFVMSPEAALE
Trigger: CTCCAAAGCAGCTTCCGGCGACATAACAAACAACAAAGATACCTGTAGTAACAAGAAACAGAAACCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp ACACTTGTTCTCCTTGTACTGGGTGAAGTCAATATTGAGTGCAGATaGTCTTCCATTGGTTTCTGGTCCGTGAAACTTGTTCTCTTAGTA +
Preference number: 6 (lower is better)
Translates to: TLVLLVLGEVNIECR*SSIGFWSVKLVLLV
Trigger: TACTAAGAGAACAAGTTTCACGGACCAGAAACCAATGGAAGACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAGAACAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp TCTCTCTTAACTTCGTCTCCGATCTTTGTCATAAGTGACATCTCCTaGAATTGCCAATCCGCTTCAACTTCTTGGTGTAGGTTTAGTTTT +
Preference number: 6 (lower is better)
Translates to: SLLTSSPIFVISDIS*NCQSASTSWCRFSF
Trigger: AAAACTAAACCTACACCAAGAAGTTGAAGCGGATTGGCAATTCAAGGAGATGTCACTTATGACAAAGATCGGAGACGAAGTTAAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS GCA 72 bp GCTTTTGAATTGAAGAAGCTGTTTCACTTGGCCTTTTaGTTTCAGAAGTACTTTCTTCCCGCTTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: AFELKKLFHLAF*FQKYFLPAFLL
Trigger: AAGAAGGAAAGCGGGAAGAAAGTACTTCTGAAAGCAAAAGGCCAAGTGAAACAGCTTCTTCAATTCAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CCA 72 bp CCTTCATGTTATTTTGAGAATGATGGCTTGATCGTCTaGTTTCTAGAGATTCTTGAGATGATCTCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: PSCYFENDGLIV*FLEILEMISGL
Trigger: CAGACCAGAGATCATCTCAAGAATCTCTAGAAACCAGACGATCAAGCCATCATTCTCAAAATAACATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp AACTTGGTTGCTTTTGAATTGAAGAAGCTGTTTCACTaGGCCTTTTGCTTTCAGAAGTACTTTCTTCCCGCT +
Preference number: 6 (lower is better)
Translates to: NLVAFELKKLFH*AFCFQKYFLPA
Trigger: AGCGGGAAGAAAGTACTTCTGAAAGCAAAAGGCCAAGTGAAACAGCTTCTTCAATTCAAAAGCAACCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp CATAAAACATTCTCTGGTCGGAAACACTTGTTCTCCTaGTACTGGGTGAAGTCAATATTGAGTGCAGATTGT +
Preference number: 6 (lower is better)
Translates to: HKTFSGRKHLFS*YWVKSILSADC
Trigger: ACAATCTGCACTCAATATTGACTTCACCCAGTACAAGGAGAACAAGTGTTTCCGACCAGAGAATGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp GTGAATGATGTGATGTCCTTGAAGATCCTTTGTCATACTTGTGATTaGATGTATTTTGTATACCCCTCTGTTGAGGTGGTAAAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: VNDVMSLKILCHTCD*MYFVYPSVEVVKSL
Trigger: CAACGACTTTACCACCTCAACAGAGGGGTATACAAAATACATCAAATCACAAGTATGACAAAGGATCTTCAAGGACATCACATCATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS TCA 72 bp TTCGTTCCAGATGTTCTTGAGACATTTTCGGCTCTGTaGAACTTGGTTGCTTTTGAATTGAAGAAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: FVPDVLETFSAL*NLVAFELKKLF
Trigger: AAACAGCTTCTTCAATTCAAAAGCAACCAAGTTTCACAGAGCCGAAAATGTCTCAAGAACATCTGGAACGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS TCA 72 bp TTGCATCAGTCTTTCGGAGATGCTAGTCCTCATACTTaGTATAGATGTTTTTCGTTCCAGATGTTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LHQSFGDASPHT*YRCFSFQMFLR
Trigger: TCTCAAGAACATCTGGAACGAAAAACATCTATATCAAGTATGAGGACTAGCATCTCCGAAAGACTGATGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp GCTGGTCCAATCTTTGGAATGGTAGGTTTCTGTTTCTaGTTACTACAGGTATCTTTGTTGTTTGTTATGTCG +
Preference number: 6 (lower is better)
Translates to: AGPIFGMVGFCF*LLQVSLLFVMS
Trigger: CGACATAACAAACAACAAAGATACCTGTAGTAACAAGAAACAGAAACCTACCATTCCAAAGATTGGACCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp CTAGAGATTCTTGAGATGATCTCTGGTCTGAGATGCTaGTTTTCTTTACATACTGTGGAGGCATTATTGCTT +
Preference number: 6 (lower is better)
Translates to: LEILEMISGLRC*FSLHTVEALLL
Trigger: AAGCAATAATGCCTCCACAGTATGTAAAGAAAACAAGCATCTCAGACCAGAGATCATCTCAAGAATCTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp GTGATGTCCTTGAAGATCCTTTGTCATACTTGTGATTaGATGTATTTTGTATACCCCTCTGTTGAGGTGGTA +
Preference number: 6 (lower is better)
Translates to: VMSLKILCHTCD*MYFVYPSVEVV
Trigger: TACCACCTCAACAGAGGGGTATACAAAATACATCAAATCACAAGTATGACAAAGGATCTTCAAGGACATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 72 bp GATCAGGAGCTCTGTCATGTGAATGATGTGATGTCCTaGAAGATCCTTTGTCATACTTGTGATTTGATGTAT +
Preference number: 6 (lower is better)
Translates to: DQELCHVNDVMS*KILCHTCDLMY
Trigger: ATACATCAAATCACAAGTATGACAAAGGATCTTCAAGGACATCACATCATTCACATGACAGAGCTCCTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS CAA 90 bp TGTGTTTATGTGTGTTTCTTCGAAAAGAAGGATCAACTTCATGTGTaGGAATATCATGACATGGTTGTCTGGAAAGTGCAGTTGATTGCA +
Preference number: 6 (lower is better)
Translates to: CVYVCFFEKKDQLHV*EYHDMVVWKVQLIA
Trigger: TGCAATCAACTGCACTTTCCAGACAACCATGTCATGATATTCCAACACATGAAGTTGATCCTTCTTTTCGAAGAAACACACATAAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS GCA 72 bp TTTCTAGAGATTCTTGAGATGATCTCTGGTCTGAGATaGTTGTTTTCTTTACATACTGTGGAGGCATTATTG +
Preference number: 6 (lower is better)
Translates to: FLEILEMISGLR*LFSLHTVEALL
Trigger: CAATAATGCCTCCACAGTATGTAAAGAAAACAAGCATCTCAGACCAGAGATCATCTCAAGAATCTCTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2
CDS TCA 72 bp TGTTTCTTTCGGTTAATTTCTTCTCGGATTTTCCGATaGTGTTCTTCAACTTTTGTCTCTCTCTTAACTTCG +
Preference number: 6 (lower is better)
Translates to: CFFRLISSRIFR*CSSTFVSLLTS
Trigger: CGAAGTTAAGAGAGAGACAAAAGTTGAAGAACATCATCGGAAAATCCGAGAAGAAATTAACCGAAAGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114928.2