Pregenerated sensors for FSIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075249Ensembl transcript IDs: ENSMUST00000132967.2, ENSMUST00000136202.2, ENSMUST00000143764.9
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTaGGGACGACTTAGGAATACTGCCGCTCGATCGGGAGAACACCTT | + |
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Preference number: 1 (lower is better) Translates to: ILSSGKASSLILVRW*GRLRNTAARSGEHL Trigger: AAGGTGTTCTCCCGATCGAGCGGCAGTATTCCTAAGTCGTCCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR GCA 90 bp | ATGTGGGCTGACAACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTaGTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: MWADNICSGLRTFSG*LCLLLSWKKQRGFL Trigger: CAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTCAGCCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR GCA 90 bp | CTCCAACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATaGCCTCACTTAAGCTACTATCTGACTCTTTTCGACCAATATCAT | + |
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Preference number: 1 (lower is better) Translates to: LQQLLLGQPPPHQKP*PHLSYYLTLFDQYH Trigger: ATGATATTGGTCGAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 90 bp | ATTCCACTTTCTTCAATACTTTCAATATTTTCGCCAGATGTGGGCTaGCAACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTGCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: IPLSSILSIFSPDVG*QHLLRAKNLFRLLV Trigger: CACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTCAGCCCACATCTGGCGAAAATATTGAAAGTATTGAAGAAAGTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 90 bp | ATGCCCTCACTTAAGCTACTATCTGACTCTTTTCGACCAATATCATaGGCTACAAGCCGGATGATCAGATCTGTTTTGTTATTAATATCT | + |
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Preference number: 1 (lower is better) Translates to: MPSLKLLSDSFRPIS*ATSRMIRSVLLLIS Trigger: AGATATTAATAACAAAACAGATCTGATCATCCGGCTTGTAGCTCATGATATTGGTCGAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 90 bp | ATAGTGACAAACTCAAGACTGTTTGAGTTTCCTTCTTGTGGTTCCTaGCAACTTTCTTCTAATGCATTAGCCTTTGCATCTGGTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: IVTNSRLFEFPSCGS*QLSSNALAFASGRN Trigger: ATTTCTACCAGATGCAAAGGCTAATGCATTAGAAGAAAGTTGTCAGGAACCACAAGAAGGAAACTCAAACAGTCTTGAGTTTGTCACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 90 bp | TGGGCTGACAACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTGCTaGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: WADNICSGLRTFSGC*CLLLSWKKQRGFLQ Trigger: CTGCAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTCAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTATTGCTTGTTGCTGTCTTaGAAGAAACAACGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HVKLGSSSFHVCLVRVHYCLLLS*KKQRGF Trigger: AAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCA...ATAATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR GCA 90 bp | AACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTTGTGGGCTGACAACATTTaGTCAGGGCTAAGAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: NTFDRVEDTFASTLDPCLWADNI*SGLRTF Trigger: AAAGGTTCTTAGCCCTGAGCAAATGTTGTCAGCCCA...CAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 90 bp | GACAACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTGCTTGTGCTaGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTGCAGATTTTT | + |
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Preference number: 2 (lower is better) Translates to: DNICSGLRTFSGCLC*LLSWKKQRGFLQIF Trigger: AAAAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACATGTTCCTTTGAAACTTCTGCCAAGCTTTTaGAAGAAGGCATGTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TLAWKYCSWAFLKHVPLKLLPSF*KKACQA Trigger: AGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAG...TTTCAAAGGAACATGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTATATTTTTCTTAAGCACTaGTCTCCAACAACTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HVKLGSSSFHVCLVRVHYIFLKH*SPTTSP Trigger: AGGAGAAGTTGTTGGAGACCAGTGCTTAAGAAAAAT...ATAATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 90 bp | TTATATTGTAACTTGTCCCTAGAAGTTGTTTCTTCTGCCAAGCTTTaGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: LYCNLSLEVVSSAKL*QEGMSSSAAALFTY Trigger: ATACGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGAAACAACTTCTAGGGACAAGTTACAATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACATGTTCCTTTGAAACCTTCTTGTGGTTCCTaGCAACTTTCTTCTAATGCA | + |
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Preference number: 2 (lower is better) Translates to: TLAWKYCSWAFLKHVPLKPSCGS*QLSSNA Trigger: TGCATTAGAAGAAAGTTGTCAGGAACCACAAGAAGG...TTTCAAAGGAACATGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 72 bp | AGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTaGGGACGACTTAGGAATACTGCCGCTCGATCGGGA | + |
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Preference number: 3 (lower is better) Translates to: SGKASSLILVRW*GRLRNTAARSG Trigger: TCCCGATCGAGCGGCAGTATTCCTAAGTCGTCCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCACTCTAGACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACAAAGAACCTTTTCAGGTaGCTTGTGCTTGTTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASTLDPCLEILLLGISETKNLFR*LVLVAV Trigger: GACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTT...TGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 72 bp | TTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTaGGGTGGTGAGGACGACTTAGGAATACTGCCGCTC | + |
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Preference number: 3 (lower is better) Translates to: FYQVEKLHRLSW*GGEDDLGILPL Trigger: GAGCGGCAGTATTCCTAAGTCGTCCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR GCA 72 bp | CTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATaGCCTCACTTAAGCTACTATCTGACTCTTTTCGAC | + |
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Preference number: 3 (lower is better) Translates to: LLLGQPPPHQKP*PHLSYYLTLFD Trigger: GTCGAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGCATTTCTGAAACATGTTCCTTTGAAAGACGTGCACTACCGGCTATATGTTCTTCTGCCAAGCTTTaGCAAGAAGGCATGTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: LGISETCSFERRALPAICSSAKL*QEGMSS Trigger: GCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGA...ACATATAGCCGGTAGTGCACGTCTTTCAAAGGAACATGTTTCAGAAATGCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCACTCTAGACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACACAAACTCAAGACTGTTaGAGTTTCCTTCTTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: ASTLDPCLEILLLGISETQTQDC*SFLLVV Trigger: AACCACAAGAAGGAAACTCAAACAGTCTTGAGTTTG...TGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR GCA 72 bp | AGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTaGTTGGAAATACTGCTCCTGGGCATTTCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RVEDTFASTLDP*LEILLLGISET Trigger: TGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR GCA 72 bp | GACAACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTaGTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGT | + |
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Preference number: 3 (lower is better) Translates to: DNICSGLRTFSG*LCLLLSWKKQR Trigger: ACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTACTCATATCAGGTTGCTTGTGCTaGTTGCTGTCTTGGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SSASPEMRSSWLYDDVLISGCLC*LLSWKK Trigger: TTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGA...TATGAGTACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR TCA 72 bp | TCTTCAATACTTTCAATATTTTCGCCAGATGTGGGCTaGCAACATTTGCTCAGGGCTAAGAACCTTTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SSILSIFSPDVG*QHLLRAKNLFR Trigger: CCTGAAAAGGTTCTTAGCCCTGAGCAAATGTTGTCAGCCCACATCTGGCGAAAATATTGAAAGTATTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR-3UTR CAA 90 bp | AATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGACACCTTTGATAGAGTaGAAGATACCTTTGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: NHNFIKWKSFIAYPGEVVTPLIE*KIPLPA Trigger: TGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGT...CACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CCA 72 bp | AGAAATTCTTCTGCTTCGCCAGAAATGAGGTCTTCTTaGTTGTATGATGATGTACTCATAATTCTGTGTATG | + |
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Preference number: 3 (lower is better) Translates to: RNSSASPEMRSS*LYDDVLIILCM Trigger: CATACACAGAATTATGAGTACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGAATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | GTTTCTTCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTATGAGGATGCATCTGTaGTACCCCCAGTCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VSSAKLLQEGMSSSAAALMRMHL*YPQSQG Trigger: CCCCTGAGACTGGGGGTACCACAGATGCATCCTCAT...AAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTTCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTCACTTTCCTCCTCCTaGATGAGGGCCTTTCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VSSAKLLQEGMSSSAAALSLSSS*MRAFRL Trigger: TAGCCGAAAGGCCCTCATTCAGGAGGAGGAAAGTGA...AAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCTCATCAGAAACCATGCCCTCACTTAAGCTACTATCTGACTCTTTTCCACCGAGGATGGGCTTaGTGGGAACCCCATGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: PPPHQKPCPHLSYYLTLFHRGWA*WEPHAY Trigger: GTAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTG...GAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGCCCGTCCAAACATATTaGTTTGCGCATTTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SAKLLQEGMSSSAAALFTPVQTY*FAHLCP Trigger: AGGACACAAATGCGCAAATCAATATGTTTGGACGGG...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | AACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTTGCTGGCCGTGGTCGTGTaGTTTGTGTCTAGAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: NTFDRVEDTFASTLDPCLLAVVV*FVSRTR Trigger: TCTGGTTCTAGACACAAAGCACACGACCACGGCCAG...CAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCACTCTAGACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACACCTTGGGCTGTTCTTTaGGCTGAGTTTAGCATTATG | + |
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Preference number: 4 (lower is better) Translates to: ASTLDPCLEILLLGISETPWAVL*AEFSIM Trigger: CATAATGCTAAACTCAGCCCAAAGAACAGCCCAAGG...TGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CTGCCGCTCGATCGGGAGAACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCTCAAAATGGGAGCACTaGTCTATCAGTGTACCAATG | + |
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Preference number: 4 (lower is better) Translates to: LPLDRENTFDRVEDTFASSKWEH*SISVPM Trigger: CATTGGTACACTGATAGACCAGTGCTCCCATTTTGA...GCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTTCTCCCGATCGAGCGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | CCAACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATGCCCTCACTTGAGCGACGTGGCCTATaGTTTCCATTATCTTTTGAN | + |
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Preference number: 4 (lower is better) Translates to: PTTSPRTTSSSSETMPSLERRGL*FPLSFX Trigger: NTCAAAAGATAATGGAAATCATAGGCCACGTCGCTC...AAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | CTGCCGCTCGATCGGGAGAACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCTCAGACTTGAGATGTTaGTTGGAGAAGCCAAATTGT | + |
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Preference number: 4 (lower is better) Translates to: LPLDRENTFDRVEDTFASSDLRC*LEKPNC Trigger: ACAATTTGGCTTCTCCAATCAACATCTCAAGTCTGA...GCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTTCTCCCGATCGAGCGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGGGCTATACCACGTTTTaGGCAAAGTTTTCTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SAKLLQEGMSSSAAALFTGYTTF*AKFSLY Trigger: ATACAGAGAAAACTTTGCTCAAAACGTGGTATAGCC...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGAGGGGTATCTTCCACTTGTaGAGTTTGTGGCAGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HNFIKWKSFIAYPGEVVRGIFHL*SLWQPK Trigger: CTTGGGCTGCCACAAACTCCACAAGTGGAAGATACC...CCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | GGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTTTTTCAGTGTGGTTTTaGTATCTTCCACTTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GMSSSAAALFTYALLGSIFSVWF*YLPLVE Trigger: CTCCACAAGTGGAAGATACCAAAACCACACTGAAAA...AATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATGCC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | TGCTCAGGGCTAAGAACCTTTTCAGGTTGCTTGTGCTaGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CSGLRTFSGCLC*LLSWKKQRGFL Trigger: CAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | AACTTGTCCCTAGAAGTTGTTTCTTCTGCCAAGCTTTaGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NLSLEVVSSAKL*QEGMSSSAAAL Trigger: AAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGAAACAACTTCTAGGGACAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTGCAGATTTCTATCGCTGCTGTCATaGATTTCTCCCTCTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VACACCCLGRNNVAFCRFLSLLS*ISPSLL Trigger: CAAGAGAGAGGGAGAAATGCATGACAGCAGCGATAG...AAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | AGGACAACCTCCTCCTCATCAGAAACCATGCCCTCACTTAAGCTACTATCTGACACATTCTCAGTTCCTTaGAACCAATGTTTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RTTSSSSETMPSLKLLSDTFSVP*NQCLVG Trigger: TCCCACCAAACATTGGTTCCAAGGAACTGAGAATGT...GTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGCAAATGCATTTCATTTaGACCAAGTTCATGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAKLLQEGMSSSAAALFTQMHFI*TKFMIS Trigger: GCTGATCATGAACTTGGTCCAAATGAAATGCATTTG...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | AACATTTGCTCAGGGCTAAGAACCTTTTCAGGTTGCTaGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NICSGLRTFSGC*CLLLSWKKQRG Trigger: GCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | GTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTaGGAAATACTGCTCCTGGGCATTTCTGAAACATGT | + |
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Preference number: 4 (lower is better) Translates to: VEDTFASTLDPC*EILLLGISETC Trigger: ACATGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTCATCAGAAACCATGCCCTCACTTAAGCTACTATCTGACTCTTTTCTTTAAATTGTCAGCATaGGGATGCATCTGTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: PPPHQKPCPHLSYYLTLFFKLSA*GCICGT Trigger: GGTACCACAGATGCATCCTCATGCTGACAATTTAAA...GAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTCAGGTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCCCAAACATATTGATTTaGGCATTTGTGTCCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PFQVACACCCLGRNNVAFPNILI*AFVSSA Trigger: AGCCGAGGACACAAATGCGCAAATCAATATGTTTGG...GAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGACCAATGATCTCACTTaGAGTGATATTTTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAKLLQEGMSSSAAALFTTNDLT*SDIFFQ Trigger: CTGAAAGAAAATATCACTGCAAGTGAGATCATTGGT...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCTCATCAGAAACCATGCCCTCACTTAAGCTACTATCTGACTCTTTTCGGGCTCATAGATACTTaGTCTGCCATCTTTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPPHQKPCPHLSYYLTLFGLIDT*SAIFEL Trigger: TAACTCAAAGATGGCAGACCAAGTATCTATGAGCCC...GAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGGTCTCTGTTGTCATTTaGGGTTTCTTATTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKLLQEGMSSSAAALFTVSVVI*GFLFFH Trigger: ATGGAAAAATAAGAAACCCCAAATGACAACAGAGAC...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | CACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGAGGTTGGTCTGCCATCTTTaGGTTATAAGTCTGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HNFIKWKSFIAYPGEVVRLVCHL*VISLYA Trigger: GGCATACAGACTTATAACTCAAAGATGGCAGACCAA...CCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTTCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTGAATTTCTTCTGTGTTaGAGCTGCTGTTTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSAKLLQEGMSSSAAALEFLLC*SCCFTF Trigger: AAAAGTAAAACAGCAGCTGCAACACAGAAGAAATTC...AAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGAAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTGCAGATTTCCGCTCTCTCAAGACTaGTCAGAATTACTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VACACCCLGRNNVAFCRFPLSQD*SELLAK Trigger: TTTTGCAAGTAATTCTGAGCAGTCTTGAGAGAGCGG...AAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTCAGGTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCAAAGACTCTTCAAAATaGGAGCACTGGTCTATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFQVACACCCLGRNNVAFKDSSK*EHWSIS Trigger: ACTGATAGACCAGTGCTCCCATTTTGAAGAGTCTTT...GAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | AACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTTGCTTTCTACAATCTCATaGACAATTTGGTTGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTFDRVEDTFASTLDPCLLSTIS*TIWLLG Trigger: CCCTAGCAACCAAATTGTGCATGAGATTGTAGAAAG...CAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | AGAAATTCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTAGGATCTGCTCTCTCTTaGAGTTTTCTCTCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNSSASPEMRSSWLYDDVGSALS*SFLSSR Trigger: TCTGCTGGAGAGAAAACTCCAAGAGAGAGCAGATCC...TACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTACTCATAAAATGGTGTAAAGTTTaGTTTCCTCTGGCCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSASPEMRSSWLYDDVLIKWCKV*FPLAVV Trigger: GACCACGGCCAGAGGAAACCAAACTTTACACCATTT...TATGAGTACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | AATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGCGAAAACAATGGTCTTaGTTTCCTCCACAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHNFIKWKSFIAYPGEVVRKQWS*FPPQSL Trigger: CAGAGACTGTGGAGGAAACCAAGACCATTGTTTTCG...CACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | AAATACTGCTCCTGGGCATTTCTGAAACATGTTCCTTaGAAAGACGTGCACTACCGGCTATATGTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KYCSWAFLKHVP*KDVHYRLYVLI Trigger: GATCAAAACATATAGCCGGTAGTGCACGTCTTTCAAAGGAACATGTTTCAGAAATGCCCAGGAGCAGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | CACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGAGGTGGTGGGAAGGTTTTTaGTCAAAGACTCTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HNFIKWKSFIAYPGEVVRWWEGF*SKTLQN Trigger: ATTTTGAAGAGTCTTTGATCAAAAACCTTCCCACCA...CCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | GAGAATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGTTCATTTGGCTCAGCTaGTTTGGTGGTCTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: ENHNFIKWKSFIAYPGEVFIWLS*FGGLIM Trigger: CATTATGAGACCACCAAATCAGCTGAGCCAAATGAA...CACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GGTGATAGTTGTGTTGAAATAATTGACTCTCTAGCTGATGTAGTTCCAGGATCTGTTGTTCCTCTGCTGTaGGCTCAAGTTGTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GDSCVEIIDSLADVVPGSVVPLL*AQVVPI Trigger: AATTGGAACAACTTGAGCGCACAGCAGAGGAACAAC...AGATCCTGGAACTACATCAGCTAGAGAGTCAATTATTTCAACACAACTATCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136202.2 |
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| CDS-3UTR GCA 90 bp | AACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTTGCTTCTGTGTTGCAGCTaGTGTTTTACTTTTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: NTFDRVEDTFASTLDPCLLLCCS*CFTFRL Trigger: AAGTCTAAAAGTAAAACAGCAGCTGCAACACAGAAG...CAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | CTCTTTTCGACCAATATCATGAGCTACAAGCCGGATGATCAGATCTGTTTTGTTGCTCAGCTGATTTGGTaGTCTCATAATGAAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSTNIMSYKPDDQICFVAQLIW*SHNEKP Trigger: GGGTTTTTCATTATGAGACCACCAAATCAGCTGAGC...AACAAAACAGATCTGATCATCCGGCTTGTAGCTCATGATATTGGTCGAAAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | GAGAATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGGCCTTCTTACGTTTTaGAATGAATTTCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ENHNFIKWKSFIAYPGEVGLLTF*NEFLPT Trigger: TGTTGGCAGAAATTCATTTCAAAACGTAAGAAGGCC...CACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GGTGATAGTTGTGTTGAAATAATTGACTCTCTAGCTGATGTAGTTCCAGGATCTCGGCTTTTCCTCCTTTaGTCTTCTATCTTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSCVEIIDSLADVVPGSRLFLL*SSIFCS Trigger: AGAACAGAAGATAGAAGAGCAAAGGAGGAAAAGCCG...AGATCCTGGAACTACATCAGCTAGAGAGTCAATTATTTCAACACAACTATCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136202.2 |
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| CDS-3UTR GCA 90 bp | AACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCACTCTAGACCCTTGCTTGCATTTTCACAGGAGTTaGAAATTCAACCTGATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTFDRVEDTFASTLDPCLHFHRS*KFNLIN Trigger: GTTAATCAGGTTGAATTTGCAACTCCTGTGAAAATG...CAAGCAAGGGTCTAGAGTGCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCATTTCTGAAACATGTTCCTTTGAAAGACGTGCACTACCGGCTATATGTTGTCGTAACATGTCTTaGAACCAAATGCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LGISETCSFERRALPAICCRNMS*NQMHFI Trigger: AATGAAATGCATTTGGTTGCAAGACATGTTACGACA...ACATATAGCCGGTAGTGCACGTCTTTCAAAGGAACATGTTTCAGAAATGCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | GTATGCCTTGTTAGGGTCCATTATCTGAATTCCACTTTCTTCAATACTTTCAATCAGCTAAACATATTTTaGGAGGGGGAGCAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCLVRVHYLNSTFFNTFNQLNIF*EGEQLS Trigger: AGACAACTGCTCCCCCTCTCAAAATATGTTTAGCTG...ATTGAAAGTATTGAAGAAAGTGGAATTCAGATAATGGACCCTAACAAGGCATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTACTCATATTGGCAGCATCTTTTTaGTTAATTGTCTTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSASPEMRSSWLYDDVLILAASF*LIVFVG Trigger: CCCAACAAAGACAATTAAGCAAAAAGATGCTGCCAA...TATGAGTACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CCA 90 bp | GAGAATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGTATGCTAACTGGAGATaGTTCCATTTGGCTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENHNFIKWKSFIAYPGEVYANWR*FHLAYF Trigger: GAAATAAGCCAAATGGAACCATCTCCAGTTAGCATA...CACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | AGAAATTCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTACTGAGTTTAGCATTATaGAGTCTAAGAAGATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNSSASPEMRSSWLYDDVLSLAL*SLRRYR Trigger: CCTGTATCTTCTTAGACTTCATAATGCTAAACTCAG...TACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGAATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | TCACTAGCAAGGATTTCTTCTTCCTTATATTGTAACTaGTCCCTAGAAGTTGTTTCTTCTGCCAAGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLARISSSLYCN*SLEVVSSAKLL Trigger: CAAAAGCTTGGCAGAAGAAACAACTTCTAGGGACAAGTTACAATATAAGGAAGAAGAAATCCTTGCTAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| 3UTR CAA 72 bp | AATTCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTaGTATGATGATGTACTCATAATTCTGTGTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSASPEMRSSW*YDDVLIILCMK Trigger: CTTCATACACAGAATTATGAGTACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR GCA 90 bp | GGTGATAGTTGTGTTGAAATAATTGACTCTCTAGCTGATGTAGTTCCAGGATCTATATCCAAATATCTGTaGCTTAACAAACGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSCVEIIDSLADVVPGSISKYL*LNKRSW Trigger: CCAAGAACGTTTGTTAAGGCACAGATATTTGGATAT...AGATCCTGGAACTACATCAGCTAGAGAGTCAATTATTTCAACACAACTATCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136202.2 |
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| CDS-3UTR CCA 90 bp | GTATGCCTTGTTAGGGTCCATTATCTGAATTCCACTTTCTTCAATACTTTCAATTTTCAGTATGCTAACTaGAGATGGTTCCATTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCLVRVHYLNSTFFNTFNFQYAN*RWFHLA Trigger: AGCCAAATGGAACCATCTCCAGTTAGCATACTGAAA...ATTGAAAGTATTGAAGAAAGTGGAATTCAGATAATGGACCCTAACAAGGCATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR TCA 90 bp | GTATGCCTTGTTAGGGTCCATTATCTGAATTCCACTTTCTTCAATACTTTCAATTCCAATTTGCAATGGTaGATATGGCAAAATGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCLVRVHYLNSTFFNTFNSNLQW*IWQNGV Trigger: AACACCATTTTGCCATATTCACCATTGCAAATTGGA...ATTGAAAGTATTGAAGAAAGTGGAATTCAGATAATGGACCCTAACAAGGCATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS GCA 90 bp | GCCATCCACACATTGCTGACTGTCCTCAGCCACGGTGCTGGAGGCTaGCTTGTTGGCGGCCACATTGGCAGTCTTGGAGCAGGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AIHTLLTVLSHGAGG*LVGGHIGSLGAGTE Trigger: CTCAGTGCCTGCTCCAAGACTGCCAATGTGGCCGCCAACAAGGCAGCCTCCAGCACCGTGGCTGAGGACAGTCAGCAATGTGTGGATGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 90 bp | CACCTGAGCACCTCTGCTTTTCATGGTGGTGGGTGGAGACATCGCTaGCTGTTGCACTTGACTACCTTGGCTTTTCATGCTGGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLSTSAFHGGGWRHR*LLHLTTLAFHAGGW Trigger: CCACCCACCAGCATGAAAAGCCAAGGTAGTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | GAGATGTTGATGACTCTTGCACCTGAGCACCTCTGTCTTTCATGCTaGGGGGTGGAGACATTGCTGACTGTTGCACCTGAGCACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EMLMTLAPEHLCLSC*GVETLLTVAPEHLC Trigger: GCAGAGGTGCTCAGGTGCAACAGTCAGCAATGTCTCCACCCCCCAGCATGAAAGACAGAGGTGCTCAGGTGCAAGAGTCATCAACATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 90 bp | CTGCTTTCCTTGGTGGTGAATGGAGATGTCACTGACTCTTGCACCTaGGCACCTCTGCTTTTCATGGTGGTGGGTGGAGACATCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLVVNGDVTDSCT*APLLFMVVGGDIAD Trigger: GTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAGTGACATCTCCATTCACCACCAAGGAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 90 bp | TGGCTTTTCATGCTGGTGGGTGGAGATGTAGCAAACTGTTGCACCTaGGCACCTTTGCCTTTCATGGTGGTGGGTGGAGACATCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLFMLVGGDVANCCT*APLPFMVVGGDITD Trigger: GTCAGTGATGTCTCCACCCACCACCATGAAAGGCAAAGGTGCTCAGGTGCAACAGTTTGCTACATCTCCACCCACCAGCATGAAAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 90 bp | CTGCTTTTCATGGTGGTGGGTGGAGACATCGCTGACTGTTGCACTTaGCTACCTTGGCTTTTCATGCTGGTGGGTGGAGATGTAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLFMVVGGDIADCCT*LPWLFMLVGGDVAN Trigger: GTTTGCTACATCTCCACCCACCAGCATGAAAAGCCAAGGTAGTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | ATGGAGATGTCACTGACTCTTGCACCTGAGCACCTCTGCTTTTCATaGTGGTGGGTGGAGACATCGCTGACTGTTGCACTTGACTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: MEMSLTLAPEHLCFS*WWVETSLTVALDYL Trigger: AAGGTAGTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAGTGACATCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS-3UTR CAA 90 bp | CACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGGTGAGGCCACCGAGGATGGGCTaGGTGGGAACCCCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HNFIKWKSFIAYPGEVVRPPRMG*VGTPCL Trigger: TAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTGG...CCTCACCACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | CATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTATGGCATAGCTTCTGAGTaGGACCTTCCCATTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVKLGSSSFHVCLVRVHYGIASE*DLPIGS Trigger: AGAGCCAATGGGAAGGTCCAACTCAGAAGCTATGCC...ATAATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS CCA 90 bp | TGCCACCGAGGATGGGCTTGGTGGGAACCCCATGCTTACTCTTGCTaGTACCGTGTTCTTTCCTACTTGTTAGAATTCCATTACTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHRGWAWWEPHAYSC*YRVLSYLLEFHYYP Trigger: AGGATAGTAATGGAATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS TCA 90 bp | CACAATTTGGTTGCTAGGGCTCATAGATACTTGGTCTGCCATCTTTaGGTTATAAGTCTGTATGCCACCGAGGATGGGCTTGGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HNLVARAHRYLVCHL*VISLYATEDGLGGN Trigger: GTTCCCACCAAGCCCATCCTCGGTGGCATACAGACTTATAACTCAAAGATGGCAGACCAAGTATCTATGAGCCCTAGCAACCAAATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS GCA 90 bp | GTATGCCACCGAGGATGGGCTTGGTGGGAACCCCATGCTTACTCTTaGTGGTACCGTGTTCTTTCCTACTTGTTAGAATTCCATTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: VCHRGWAWWEPHAYS*WYRVLSYLLEFHYY Trigger: ATAGTAATGGAATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTGGCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS-3UTR CAA 90 bp | CCAACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATGCCCTCACTTTCCAAACATATTGATTaGCGCATTTGTGTCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTTSPRTTSSSSETMPSLSKHID*RICVLG Trigger: GCCGAGGACACAAATGCGCAAATCAATATGTTTGGA...AAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGCTTGGTCTGCCATCTTaGAGTTATAAGTCTGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SAKLLQEGMSSSAAALFTLGLPS*SYKSVC Trigger: GCATACAGACTTATAACTCAAAGATGGCAGACCAAG...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCAACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATGCCCTCAAACATTCTCAGTTCCTaGGAACCAATGTTTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTTSPRTTSSSSETMPSNILSS*EPMFGG Trigger: CCCACCAAACATTGGTTCCAAGGAACTGAGAATGTT...TGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGTTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | CTGCCGCTCGATCGGGAGAACACCTTTGATAGAGTTGAAGATACCTTTGCCAGCCAACAGCCTCCAGTTTaGAAGTTCTTCAAATGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLDRENTFDRVEDTFASQQPPV*KFFKCV Trigger: CACACATTTGAAGAACTTCAAAACTGGAGGCTGTTG...GCTGGCAAAGGTATCTTCAACTCTATCAAAGGTGTTCTCCCGATCGAGCGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | GAGAATCACAATTTTATCAAGTGGAAAAGCTTCATCGCTTATCCTGGTGAGGTGAGCCCAAGGGCGGTTTaGGATCTGCTCTCTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ENHNFIKWKSFIAYPGEVSPRAV*DLLSLG Trigger: TCCAAGAGAGAGCAGATCCAAAACCGCCCTTGGGCT...CACCTCACCAGGATAAGCGATGAAGCTTTTCCACTTGATAAAATTGTGATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | CCAACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATGCCCTCACTTTTCGTTAGTGTTTGGTaGATGGGGAAACCCATAACT | + |
|
Preference number: 5 (lower is better) Translates to: PTTSPRTTSSSSETMPSLFVSVW*MGKPIT Trigger: AGTTATGGGTTTCCCCATCAACCAAACACTAACGAA...AAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS GCA 90 bp | CATTACCTTTATATTTGCTGCTCAAATGTTGCACCTGAGCACCCCTaGTTTTCATGGTTGTGGGTGGAGATGTTGATGACTCTTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HYLYICCSNVAPEHP*FSWLWVEMLMTLAP Trigger: AGGTGCAAGAGTCATCAACATCTCCACCCACAACCATGAAAAGCAGGGGTGCTCAGGTGCAACATTTGAGCAGCAAATATAAAGGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | TTTGTCTTGTTCCCATTTCAGACACATCTGTGGAAGAGGGACCTATaGCACGTATGGAATTTCTTCTCAGCTCTGCTATGCTACATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FVLFPFQTHLWKRDL*HVWNFFSALLCYIQ Trigger: CTGGATGTAGCATAGCAGAGCTGAGAAGAAATTCCATACGTGGCATAGGTCCCTCTTCCACAGATGTGTCTGAAATGGGAACAAGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | ACTCCCTTGAGGAAGAAAGTTGTGAGTTTTTGTGACTTGCTCAAATaGTGTAAAGTTTGGTTTCCTCTGGCCGTGGTCGTGTGCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPLRKKVVSFCDLLK*CKVWFPLAVVVCFV Trigger: CACAAAGCACACGACCACGGCCAGAGGAAACCAAACTTTACACCATTTGAGCAAGTCACAAAAACTCACAACTTTCTTCCTCAAGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 90 bp | CCGATTGAAAATAGGTTGAGTAATGCGGTTTGCGTTTTCCTTGCATaGGTCAGGAGCAAGTTCCTTGGTGTCTTCTTTGCCATTTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIENRLSNAVCVFLA*VRSKFLGVFFAIYR Trigger: CCTGTAAATGGCAAAGAAGACACCAAGGAACTTGCTCCTGACCCATGCAAGGAAAACGCAAACCGCATTACTCAACCTATTTTCAATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | AGATGCGTCTCTCTTTTTGTCTTGTTCCCATTTCAGACACATCTGTaGAAGAGGGACCTATGCCACGTATGGAATTTCTTCTCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCVSLFVLFPFQTHL*KRDLCHVWNFFSAL Trigger: CAGAGCTGAGAAGAAATTCCATACGTGGCATAGGTCCCTCTTCCACAGATGTGTCTGAAATGGGAACAAGACAAAAAGAGAGACGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | ACAACTTCTCCTAGGACAACCTCCTCCTCATCAGAAACCATGCCCTCACTTAAGGTTTTCAGTGTGGTTTaGGTATCTTCCACTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTSPRTTSSSSETMPSLKVFSVV*VSSTCG Trigger: TCCACAAGTGGAAGATACCAAAACCACACTGAAAAC...CTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCCTAGGAGAAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | CATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTATTCATGCACAATTTGGTaGCTAGGGCTCATAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: HVKLGSSSFHVCLVRVHYSCTIW*LGLIDT Trigger: AGTATCTATGAGCCCTAGCAACCAAATTGTGCATGA...ATAATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCACTCTAGACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACATTGTCTTTGTTGGGCTaGAAAGAGATTGTCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASTLDPCLEILLLGISETLSLLG*KEIVYW Trigger: CCAATAGACAATCTCTTTCAAGCCCAACAAAGACAA...TGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGTCTAGAGTGCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCAAGCTTTTGCAAGAAGGCATGTCAAGCTCGGCAGCAGCTCTTTTCACGTTGGTGGGAAGGTTTTaGATCAAAGACTCTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAKLLQEGMSSSAAALFTLVGRF*IKDSSK Trigger: TTTTGAAGAGTCTTTGATCAAAAACCTTCCCACCAA...CGTGAAAAGAGCTGCTGCCGAGCTTGACATGCCTTCTTGCAAAAGCTTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCTGCAGATTTGCAGCTAAACATATTTaGAGAGGGGGAGCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VACACCCLGRNNVAFCRFAAKHI*RGGAVV Trigger: GACAACTGCTCCCCCTCTCAAAATATGTTTAGCTGC...AAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS TCA 90 bp | TTCCCAGTTTCATTACCTTTATATTTGCTGCTCAAATGTTGCACCTaGGCACCCCTGCTTTTCATGGTTGTGGGTGGAGATGTTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPVSLPLYLLLKCCT*APLLFMVVGGDVDD Trigger: GTCATCAACATCTCCACCCACAACCATGAAAAGCAGGGGTGCTCAGGTGCAACATTTGAGCAGCAAATATAAAGGTAATGAAACTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | TGGAAAAATGTCATAGATGGCCACTCTTGCAGGGGCAGAGTCCTTTaGATTTATGGCAAGCACAACCAAACTTGTAAGGTTATGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WKNVIDGHSCRGRVL*IYGKHNQTCKVMKH Trigger: GTGCTTCATAACCTTACAAGTTTGGTTGTGCTTGCCATAAATGCAAAGGACTCTGCCCCTGCAAGAGTGGCCATCTATGACATTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | CGTTTTCCTTGCATGGGTCAGGAGCAAGTTCCTTGGTGTCTTCTTTaGCATTTACAGGTACCTGATAAACATCAGGAGAACCCAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFPCMGQEQVPWCLL*HLQVPDKHQENPNS Trigger: AGAATTTGGGTTCTCCTGATGTTTATCAGGTACCTGTAAATGGCAAAGAAGACACCAAGGAACTTGCTCCTGACCCATGCAAGGAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | AAGAGGGACCTATGCCACGTATGGAATTTCTTCTCAGCTCTGCTATaGTACATCCAGTTCTCTTTAAACAGTCCATCTGAAGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRDLCHVWNFFSALL*YIQFSLNSPSEVSP Trigger: TGGAGACACTTCAGATGGACTGTTTAAAGAGAACTGGATGTAGCATAGCAGAGCTGAGAAGAAATTCCATACGTGGCATAGGTCCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCAGGTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCCTCAGACTTGAGATGTaGATTGGAGAAGCCAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: PFQVACACCCLGRNNVAFLRLEM*IGEAKL Trigger: CAATTTGGCTTCTCCAATCAACATCTCAAGTCTGAG...GAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACATGTTCCTTTGAAAGCGAAAACAATGGTCTaGGTTTCCTCCACAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLAWKYCSWAFLKHVPLKAKTMV*VSSTVS Trigger: AGAGACTGTGGAGGAAACCAAGACCATTGTTTTCGC...TTTCAAAGGAACATGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS GCA 90 bp | TATGAATCTTTGCCTGACAATGCTTGGCTTAATGACCCCTCTTCTTaGATTACTGGCAAAGTCACTGGAACTGTGAATTTGACTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YESLPDNAWLNDPSS*ITGKVTGTVNLTWG Trigger: TCCCCAAGTCAAATTCACAGTTCCAGTGACTTTGCCAGTAATGCAAGAAGAGGGGTCATTAAGCCAAGCATTGTCAGGCAAAGATTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | CATGTCAAGCTCGGCAGCAGCTCTTTTCACGTATGCCTTGTTAGGGTCCATTATCAGTTTCTGTATCACTaGTTTCTGTTTGCCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HVKLGSSSFHVCLVRVHYQFLYH*FLFAIC Trigger: ACAAATGGCAAACAGAAACAAGTGATACAGAAACTG...ATAATGGACCCTAACAAGGCATACGTGAAAAGAGCTGCTGCCGAGCTTGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTTGCTTGGAAATACTGCTCCTGGGCATTTCTGAAACATGTTCCTTTGAAACCTCCACAGTCTCTGTaGTCATTTGGGGTTTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TLAWKYCSWAFLKHVPLKPPQSL*SFGVSY Trigger: ATAAGAAACCCCAAATGACAACAGAGACTGTGGAGG...TTTCAAAGGAACATGTTTCAGAAATGCCCAGGAGCAGTATTTCCAAGCAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS TCA 90 bp | CTGAGTCAGAGCTCATTAGTGCAGCATGTTTTTGTGCCTTTTCAATaGTTCTGTTTGTGTCTAAATCTCCATGTGCAGCAGTGTAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQSSLVQHVFVPFQ*FCLCLNLHVQQCKS Trigger: GCTCTTACACTGCTGCACATGGAGATTTAGACACAAACAGAATCATTGAAAAGGCACAAAAACATGCTGCACTAATGAGCTCTGACTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | TATAAATACCTCCTTCTCAGGACTATTTTCCACAGTCTTAGCAACTaGAAAGTGGGTGAAGATTTCAAGAATCTGCCCCTGCTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YKYLLLRTIFHSLSN*KVGEDFKNLPLLID Trigger: GTCAATGAGCAGGGGCAGATTCTTGAAATCTTCACCCACTTTGCAGTTGCTAAGACTGTGGAAAATAGTCCTGAGAAGGAGGTATTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS-3UTR CAA 90 bp | CCTTTTCAGGTTGCTTGTGCTTGTTGCTGTCTTGGAAGAAACAACGTGGCTTTCAGAATTTCTTCTGTGTaGCAGCTGCTGTTTTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PFQVACACCCLGRNNVAFRISSV*QLLFYF Trigger: AAAGTAAAACAGCAGCTGCAACACAGAAGAAATTCT...GAAAGCCACGTTGTTTCTTCCAAGACAGCAACAAGCACAAGCAACCTGAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCATTTCTGAAACATGTTCCTTTGAAAGACGTGCACTACCGGCTATATGTATCTCATTTTTAAACTaGCTTTACCTCCTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGISETCSFERRALPAICISFLN*LYLLAL Trigger: CAAGGCCAGGAGGTAAAGCAAGTTTAAAAATGAGAT...ACATATAGCCGGTAGTGCACGTCTTTCAAAGGAACATGTTTCAGAAATGCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS TCA 90 bp | GTAACATGTCTTGCAACCAAATGCATTTCATTTGGACCAAGTTCATaGTCAGCGAAAACAATGGTCTTGGTTTCCTCCACAGTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTCLATKCISFGPSS*SAKTMVLVSSTVSV Trigger: AACAGAGACTGTGGAGGAAACCAAGACCATTGTTTTCGCTGATCATGAACTTGGTCCAAATGAAATGCATTTGGTTGCAAGACATGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS TCA 90 bp | TTGTCCTGTAACAACCAGTTTTGGAATCGTGTGACATCAGAACAGTaGGGAAGTTGGCTGGTTTCTTGCAGTTTATGTAGCTGTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSCNNQFWNRVTSEQ*GSWLVSCSLCSCFD Trigger: ATCAAAACAGCTACATAAACTGCAAGAAACCAGCCAACTTCCTCACTGTTCTGATGTCACACGATTCCAAAACTGGTTGTTACAGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 90 bp | CTTTCATTAAATGGAGCGACGTGGCCTATGATTTCCATTATCTTTTaGCTCAGCTTCTTCAAAACCTCTTCCACTGTCCTGAGTATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLNGATWPMISIIF*LSFFKTSSTVLSIS Trigger: CGAAATACTCAGGACAGTGGAAGAGGTTTTGAAGAAGCTGAGTCAAAAGATAATGGAAATCATAGGCCACGTCGCTCCATTTAATGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | TCCTTGCCTTTGATATGTTTGGTCAATAACTGTTCTTTCCACGTGTaGAGAAGGAGGTTTCAAAGGTGTAGGTGGTTTCTTTATTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLICLVNNCSFHV*RRRFQRCRWFLYWH Trigger: ATGCCAATAAAGAAACCACCTACACCTTTGAAACCTCCTTCTGCACACGTGGAAAGAACAGTTATTGACCAAACATATCAAAGGCAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | ATCCTTTGCTGGAACAAGCTGTGCAGAATCTTTAAGGATAACCAGTaGTTTATCACTTGTGAGGCTTCTGCTGTATATTGGTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILCWNKLCRIFKDNQ*FITCEASAVYWSGK Trigger: TTTTCCAGACCAATATACAGCAGAAGCCTCACAAGTGATAAAGCACTGGTTATCCTTAAAGATTCTGCACAGCTTGTTCCAGCAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | GATCACAGATGTCGTAACATGTCTTGCAACCAAATGCATTTCATTTaGACCAAGTTCATGATCAGCGAAAACAATGGTCTTGGTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DHRCRNMSCNQMHFI*TKFMISENNGLGFL Trigger: GAGGAAACCAAGACCATTGTTTTCGCTGATCATGAACTTGGTCCAAATGAAATGCATTTGGTTGCAAGACATGTTACGACATCTGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 90 bp | GTCCATTGGTGCCTCACGATAATCAAAACCTCCACCTTGAACACTTaGAAGAACTTTGACATGTTGACATTCTTCTGGTATTTCACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VHWCLTIIKTSTLNT*KNFDMLTFFWYFTK Trigger: TTTCGTGAAATACCAGAAGAATGTCAACATGTCAAAGTTCTTCCAAGTGTTCAAGGTGGAGGTTTTGATTATCGTGAGGCACCAATGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS-3UTR CAA 90 bp | CTTTTCGTTACTTCACTTCTCTTTTGTTCTGAACTGCTGTTCTGTACTTCTGCTTCGGCTTTTCCTCCTTaGCTCTTCTATCTTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFVTSLLFCSELLFCTSASAFPP*LFYLLF Trigger: GAACAGAAGATAGAAGAGCAAAGGAGGAAAAGCCGA...AGCAGAAGTACAGAACAGCAGTTCAGAACAAAAGAGAAGTGAAGTAACGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136202.2 |
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| CDS-3UTR CAA 90 bp | CTCTTTTCGACCAATATCATGAGCTACAAGCCGGATGATCAGATCTGTTTTGTTATAATAGTGCCTGGCTaGGACTCATCACCAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSTNIMSYKPDDQICFVIIVPG*DSSPNF Trigger: AAAGTTTGGTGATGAGTCCAAGCCAGGCACTATTAT...AACAAAACAGATCTGATCATCCGGCTTGTAGCTCATGATATTGGTCGAAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
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| CDS GCA 90 bp | TTCAAAATGGGAGCACTGGTCTATCAGTGTACCAATGATCTCACTTaGAGTGATATTTTCTTTCAGTATGCTAACTGGAGATGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FKMGALVYQCTNDLT*SDIFFQYANWRWFH Trigger: ATGGAACCATCTCCAGTTAGCATACTGAAAGAAAATATCACTGCAAGTGAGATCATTGGTACACTGATAGACCAGTGCTCCCATTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS GCA 90 bp | CATGATCCACTAAACAGGGAAGTTGATTATCAGAATATGAATCTTTaGCTGACAATGCTTGGCTTAATGACCCCTCTTCTTGCATTACTG | + |
|
Preference number: 5 (lower is better) Translates to: HDPLNREVDYQNMNL*LTMLGLMTPLLALL Trigger: CAGTAATGCAAGAAGAGGGGTCATTAAGCCAAGCATTGTCAGGCAAAGATTCATATTCTGATAATCAACTTCCCTGTTTAGTGGATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | TGTTTCTTTAACCTCAGGAGGGGATGTAGGAGCTGGTTCTTTGGCTaGTTGTACTTCATCTTCTTTTTCTGGTCTAAATACCTTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFFNLRRGCRSWFFG*LYFIFFFWSKYLNF Trigger: GAAATTAAGGTATTTAGACCAGAAAAAGAAGATGAAGTACAAGCAGCCAAAGAACCAGCTCCTACATCCCCTCCTGAGGTTAAAGAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 90 bp | ACTGAATTGGAGTCAACTCACCACCAAAATAGTTCTGCAACTGGTTaGCAGTCACTTCTCGTAGAACTAAGTCAACTATGGTTTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TELESTHHQNSSATG*QSLLVELSQLWFLK Trigger: TTTCAAAAACCATAGTTGACTTAGTTCTACGAGAAGTGACTGGCAACCAGTTGCAGAACTATTTTGGTGGTGAGTTGACTCCAATTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 90 bp | GACTCTAACATGTGTAAGACTCTTTCTACAATCTCATGCACAATTTaGTTGCTAGGGCTCATAGATACTTGGTCTGCCATCTTTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: DSNMCKTLSTISCTI*LLGLIDTWSAIFEL Trigger: TAACTCAAAGATGGCAGACCAAGTATCTATGAGCCCTAGCAACCAAATTGTGCATGAGATTGTAGAAAGAGTCTTACACATGTTAGAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 90 bp | TTGAGTTTCACTTCAATTTTGCTTAAGGTTCTCTCTAGACCCATCTaGTCAGTAGAAAGGGTTCTAGTTTCCTCATTGAATGATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFTSILLKVLSRPI*SVERVLVSSLNDVA Trigger: TGCCACATCATTCAATGAGGAAACTAGAACCCTTTCTACTGACCAGATGGGTCTAGAGAGAACCTTAAGCAAAATTGAAGTGAAACTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | GGTGATAGTTGTGTTGAAATAATTGACTCTCTAGCTGATGTAGTTCCAGGATCTGAAGCATCATCTCCTTaGTCTTCCATTCCTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GDSCVEIIDSLADVVPGSEASSP*SSIPLQ Trigger: TTGAAGAGGAATGGAAGACAAAGGAGATGATGCTTC...AGATCCTGGAACTACATCAGCTAGAGAGTCAATTATTTCAACACAACTATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136202.2 |
||
| CDS TCA 90 bp | TCCAAATATCTGTGCCTTAACAAACGTTCTTGGTCCTTAATAGAATaGGTGTTGTCCTGTAACAACCAGTTTTGGAATCGTGTGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKYLCLNKRSWSLIE*VLSCNNQFWNRVTS Trigger: TGATGTCACACGATTCCAAAACTGGTTGTTACAGGACAACACTCATTCTATTAAGGACCAAGAACGTTTGTTAAGGCACAGATATTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 90 bp | GCCAATAGTTGGGAACCTGCTCTTGTGAACTTGATTTCTCATCATTaGAAGATGAATCAAGCACACTTTGCACAAAGTTATCGATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ANSWEPALVNLISHH*KMNQAHFAQSYRFP Trigger: AGGAAATCGATAACTTTGTGCAAAGTGTGCTTGATTCATCTTTCAATGATGAGAAATCAAGTTCACAAGAGCAGGTTCCCAACTATTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 90 bp | TCAGAGATGAAAGCAGAAGCTCCTTTGCCAGTTTGGCTTCCTAAGTaGCTAGATGAATCAGAAGACATATCCTTAAGCATATCTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEMKAEAPLPVWLPK*LDESEDISLSISVK Trigger: TTTAACAGATATGCTTAAGGATATGTCTTCTGATTCATCTAGTCACTTAGGAAGCCAAACTGGCAAAGGAGCTTCTGCTTTCATCTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 90 bp | GAAGTCACTCCTGGACAGAACATGTACTTTGCTTTTATGGAAGCCTaGTGTGCCTTATCAGCATTTATCATGTTTCTATTAGCAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EVTPGQNMYFAFMEA*CALSAFIMFLLART Trigger: AGTTCTTGCTAATAGAAACATGATAAATGCTGATAAGGCACATCAGGCTTCCATAAAAGCAAAGTACATGTTCTGTCCAGGAGTGACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | CACTCCTGGACAGAACATGTACTTTGCTTTTATGGAAGCCTGATGTaGCTTATCAGCATTTATCATGTTTCTATTAGCAAGAACTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSWTEHVLCFYGSLM*LISIYHVSISKNFN Trigger: GTTGAAGTTCTTGCTAATAGAAACATGATAAATGCTGATAAGGCACATCAGGCTTCCATAAAAGCAAAGTACATGTTCTGTCCAGGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 90 bp | AGGTGTAGGTGGTTTCTTTATTGGCATGTCACTGGCAAATGTACATaGATCTACTGGAAGTGTTTTAGCTGTGTAGTTTCTGTATGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RCRWFLYWHVTGKCT*IYWKCFSCVVSVCK Trigger: TTTACATACAGAAACTACACAGCTAAAACACTTCCAGTAGATCCATGTACATTTGCCAGTGACATGCCAATAAAGAAACCACCTACACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 90 bp | ATCTTCAGAATAAAGGACCATTCCAGGAACATTAACGGGTGGAAATaGTCTTTTAGACTTAAGATTGTTAAATGGTCTAGTGCCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IFRIKDHSRNINGWK*SFRLKIVKWSSASD Trigger: GTCACTGGCACTAGACCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCCGTTAATGTTCCTGGAATGGTCCTTTATTCTGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | CATCAGAAACCATGCCCTCACTTAAGCTACTATCTGACTCTTTTCGACCAATATTTTGGCAGCATCTTTTaGCTTAATTGTCTTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HQKPCPHLSYYLTLFDQYFGSIF*LNCLCW Trigger: CCAACAAAGACAATTAAGCAAAAAGATGCTGCCAAA...ATATTGGTCGAAAAGAGTCAGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS TCA 90 bp | GAGTCCTTTGCATTTATGGCAAGCACAACCAAACTTGTAAGGTTATaGAGCACAATATCCACTATATCTTTGGACACCAAAATGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: ESFAFMASTTKLVRL*STISTISLDTKMTS Trigger: AGATGTCATTTTGGTGTCCAAAGATATAGTGGATATTGTGCTTCATAACCTTACAAGTTTGGTTGTGCTTGCCATAAATGCAAAGGACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | ATGGCTCTGTGTTGTGCCGCTCTCTCAAGACTGCTCAGAATTACTTaGAAAATGTCAGTTATTATATTTGTGGCATATAGTCTTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: MALCCAALSRLLRIT*KMSVIIFVAYSLNS Trigger: AGAATTAAGACTATATGCCACAAATATAATAACTGACATTTTGCAAGTAATTCTGAGCAGTCTTGAGAGAGCGGCACAACACAGAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | ATTTGGACAAAGACATTTGATACCAGGAGTCCATCTGTTCTGGATTaGCATGATCCACTAAACAGGGAAGTTGATTATCAGAATATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IWTKTFDTRSPSVLD*HDPLNREVDYQNMN Trigger: ATTCATATTCTGATAATCAACTTCCCTGTTTAGTGGATCATGGCAATCCAGAACAGATGGACTCCTGGTATCAAATGTCTTTGTCCAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 90 bp | ATCATCATCTTCAGAATAAAGGACCATTCCAGGAACATTAACGGGTaGAAATGGTCTTTTAGACTTAAGATTGTTAAATGGTCTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIIFRIKDHSRNING*KWSFRLKIVKWSSA Trigger: GGCACTAGACCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCCGTTAATGTTCCTGGAATGGTCCTTTATTCTGAAGATGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS-3UTR CAA 90 bp | AGAAATTCTTCTGCTTCGCCAGAAATGAGGTCTTCTTGGTTGTATGATGATGTAATTGGAGAAGCCAAATaGTCGTTGTTTGTAGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: RNSSASPEMRSSWLYDDVIGEAK*SLFVAY Trigger: ATATGCTACAAACAACGACAATTTGGCTTCTCCAAT...TACATCATCATACAACCAAGAAGACCTCATTTCTGGCGAAGCAGAAGAATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132967.2 |
||
| CDS TCA 90 bp | AGGGATAATATTTGTACCCATAACTACTTGTTCAAAATTTGCTTCTaGGTGTTTTGCAGGTATACCATATTTCAGGGTAGGTGTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDNICTHNYLFKICF*VFCRYTIFQGRCGK Trigger: TTTGCCACACCTACCCTGAAATATGGTATACCTGCAAAACACTCAGAAGCAAATTTTGAACAAGTAGTTATGGGTACAAATATTATCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | CAAACAAGATATTTTCTGAGTTTATTGTTGAGTTCACTTGTACAATaGCAATCACCCTATGAAATATTTTGCTCACTACACCGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: QTRYFLSLLLSSLVQ*QSPYEIFCSLHRRP Trigger: TGGTCTCCGGTGTAGTGAGCAAAATATTTCATAGGGTGATTGGCATTGTACAAGTGAACTCAACAATAAACTCAGAAAATATCTTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 90 bp | AACTCTTGTAACACTGCATTAACAATTTTACTTGCTTCAAGGATTTaGCTAGATGCTAAGACTTTCGTGTTAAACATGGCTCTGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSCNTALTILLASRI*LDAKTFVLNMALCC Trigger: ACAACACAGAGCCATGTTTAACACGAAAGTCTTAGCATCTAGTCAAATCCTTGAAGCAAGTAAAATTGTTAATGCAGTGTTACAAGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS GCA 90 bp | CAGGAAGAAAATTTCCATAAGTTGGTCGGTATCCATAATTTTCATTaGTTTGGTTCTCAGATTCAGGTTCAGCAAACATATCTGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: QEENFHKLVGIHNFH*FGSQIQVQQTYLKI Trigger: TATCTTCAGATATGTTTGCTGAACCTGAATCTGAGAACCAAAGCAATGAAAATTATGGATACCGACCAACTTATGGAAATTTTCTTCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 90 bp | AAAGCTAGCTTTCTTTTGCTCAGTTTGTTGATGGACTTTATGTATTaGCTCTGTCTTAGTTTGTTGAAAATGTTTAGTTGTGTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KASFLLLSLLMDFMY*LCLSLLKMFSCVFW Trigger: CCAGAAGACACAACTAAACATTTTCAACAAACTAAGACAGAGCCAATACATAAAGTCCATCAACAAACTGAGCAAAAGAAAGCTAGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | TGCCATCCACACATTGCTGACTGTCCTCAGCCACGGTaGTGGAGGCTGCCTTGTTGGCGGCCACATTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHPHIADCPQPR*WRLPCWRPHWQ Trigger: CTGCCAATGTGGCCGCCAACAAGGCAGCCTCCAGCACCGTGGCTGAGGACAGTCAGCAATGTGTGGATGGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | CATCCACACATTGCTGACTGTCCTCAGCCACGGTGCTaGAGGCTGCCTTGTTGGCGGCCACATTGGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HPHIADCPQPRC*RLPCWRPHWQS Trigger: AGACTGCCAATGTGGCCGCCAACAAGGCAGCCTCCAGCACCGTGGCTGAGGACAGTCAGCAATGTGTGGATG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GGAATTGGGGTTTTGTGTCTGCCATCCACACATTGCTaGCTGTCCTCAGCCACGGTGCTGGAGGCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GIGVLCLPSTHC*LSSATVLEAAL Trigger: CAAGGCAGCCTCCAGCACCGTGGCTGAGGACAGTCAGCAATGTGTGGATGGCAGACACAAAACCCCAATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TTGGCTTTTCATGGTGGCAGGTGGAGATGTGGGTGGTaGGGTGGTCTCTCGGGTGGCAGGTTTGACCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAFHGGRWRCGW*GGLSGGRFDLA Trigger: AGCAAGGTCAAACCTGCCACCCGAGAGACCACCTCACCACCCACATCTCCACCTGCCACCATGAAAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ATGCTGGTGGGTGGAGATGTAGCAAACTGTTGCACCTaGGCACCTTTGCCTTTCATGGTGGTGGGTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: MLVGGDVANCCT*APLPFMVVGGD Trigger: GTCTCCACCCACCACCATGAAAGGCAAAGGTGCTCAGGTGCAACAGTTTGCTACATCTCCACCCACCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | CCACTTGTGGAGTTTGTGGCAGCCCAAGGGCGGTTTTaGATCTGCTCTCTCTTGGAGTTTTCTCTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLVEFVAAQGRF*ICSLLEFSLQQ Trigger: CTGCTGGAGAGAAAACTCCAAGAGAGAGCAGATCCAAAACCGCCCTTGGGCTGCCACAAACTCCACAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 72 bp | CTGACTCTTGCACCTGAGCACCTCTGCTTTTCATGGTaGTGGGTGGAGACATCGCTGACTGTTGCACTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTLAPEHLCFSW*WVETSLTVALD Trigger: GTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ATGGTGGTGGGTGGAGACATCACTGACTGTTGCACCTaGATACGTTGGCTCTTCATGCTGGTGGGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MVVGGDITDCCT*IRWLFMLVGGD Trigger: ATCTCCACCCACCAGCATGAAGAGCCAACGTATTCAGGTGCAACAGTCAGTGATGTCTCCACCCACCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ATGGTGGTGGGTGGAGACATCGCTGACTGTTGCACTTaGCTACCTTGGCTTTTCATGCTGGTGGGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MVVGGDIADCCT*LPWLFMLVGGD Trigger: ATCTCCACCCACCAGCATGAAAAGCCAAGGTAGTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TTGGTGGTGAATGGAGATGTCACTGACTCTTGCACCTaGGCACCTCTGCTTTTCATGGTGGTGGGTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVVNGDVTDSCT*APLLFMVVGGD Trigger: GTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAGTGACATCTCCATTCACCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 72 bp | CTAACTGTTGTACCTGACTACCTTGGCTTTTCATGGTaGCAGGTGGAGATGTGGGTGGTGAGGTGGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTVVPDYLGFSW*QVEMWVVRWSL Trigger: GAGAGACCACCTCACCACCCACATCTCCACCTGCCACCATGAAAAGCCAAGGTAGTCAGGTACAACAGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | ACTCTTGCACCTGAGCACCTCTGCTTTTCATGGTGGTaGGTGGAGACATCGCTGACTGTTGCACTTGACTAC | + |
|
Preference number: 6 (lower is better) Translates to: TLAPEHLCFSWW*VETSLTVALDY Trigger: GTAGTCAAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 72 bp | TCACTGACTCTTGCACCTGAGCACCTCTGCTTTTCATaGTGGTGGGTGGAGACATCGCTGACTGTTGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SLTLAPEHLCFS*WWVETSLTVAL Trigger: AAGTGCAACAGTCAGCGATGTCTCCACCCACCACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 72 bp | TCCACTTGTGGAGTTTGTGGCAGCCCAAGGGCGGTTTaGGATCTGCTCTCTCTTGGAGTTTTCTCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: STCGVCGSPRAV*DLLSLGVFSPA Trigger: TGCTGGAGAGAAAACTCCAAGAGAGAGCAGATCCAAAACCGCCCTTGGGCTGCCACAAACTCCACAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 72 bp | GCTTTTCATGCTGGTGGGTGGAGATGTAGCAAACTGTaGCACCTGAGCACCTTTGCCTTTCATGGTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AFHAGGWRCSKL*HLSTFAFHGGG Trigger: CCCACCACCATGAAAGGCAAAGGTGCTCAGGTGCAACAGTTTGCTACATCTCCACCCACCAGCATGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | ACTACCTTGGCTTTTCATGCTGGTGGGTGGAGATGTAGCAAACTGTaGCACCTGAGCACCTTTGCCTTTCATGGTGGTGGGTGGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: TTLAFHAGGWRCSKL*HLSTFAFHGGGWRH Trigger: ATGTCTCCACCCACCACCATGAAAGGCAAAGGTGCTCAGGTGCAACAGTTTGCTACATCTCCACCCACCAGCATGAAAAGCCAAGGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | AATATACAGTATCGGTTCCTGGGATCATGGGCAGCTTaGCCCCAAGAGGAAGATCTAGGAGCTGAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NIQYRFLGSWAA*PQEEDLGAEQL Trigger: GAGCTGCTCAGCTCCTAGATCTTCCTCTTGGGGTCAAGCTGCCCATGATCCCAGGAACCGATACTGTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 72 bp | TTGTGTATTCCCGCTGTCGTCTTTCGTCTCTGTCAATaGGGAGTAAGCGTTGTTCCTCTGCTGTGCGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LCIPAVVFRLCQ*GVSVVPLLCAQ Trigger: TTGAGCGCACAGCAGAGGAACAACGCTTACTCCGCATTGACAGAGACGAAAGACGACAGCGGGAATACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136202.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TTGAGTTATAAGTCTGTATGCCACCGAGGATGGGCTTaGTGGGAACCCCATGCTTACTCTTGCTGGTACCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSYKSVCHRGWA*WEPHAYSCWYR Trigger: ACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTGGCATACAGACTTATAACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 72 bp | ACTGTTGCACCTGAGCACCTTTGCCTTTCATGGTGGTaGGTGGAGACATCACTGACTGTTGCACCTGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: TVAPEHLCLSWW*VETSLTVAPEY Trigger: GTATTCAGGTGCAACAGTCAGTGATGTCTCCACCCACCACCATGAAAGGCAAAGGTGCTCAGGTGCAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 72 bp | GATGTGGGTGGTGAGGTGGTCTCTCGGGTGGCAGGTTaGACCTTGCTTTCATCTTCTTTCTTTGCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DVGGEVVSRVAG*TLLSSSFFASV Trigger: CACAGATGCAAAGAAAGAAGATGAAAGCAAGGTCAAACCTGCCACCCGAGAGACCACCTCACCACCCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | CCTGGGGTGGAGCATCTGTCGGTGATCCTGGTTCACCAGCATAGCTaGACTTCTTGCTTAGTCCTCCATTCCAAGTACTTTTCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVEHLSVILVHQHS*TSCLVLHSKYFSSP Trigger: AGGAGATGAAAAGTACTTGGAATGGAGGACTAAGCAAGAAGTCAAGCTATGCTGGTGAACCAGGATCACCGACAGATGCTCCACCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | ATTTGCTGCTCAAATGTTGCACCTGAGCACCCCTGCTTTTCATGGTaGTGGGTGGAGATGTTGATGACTCTTGCACCTGAGCACCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ICCSNVAPEHPCFSW*WVEMLMTLAPEHLC Trigger: ACAGAGGTGCTCAGGTGCAAGAGTCATCAACATCTCCACCCACAACCATGAAAAGCAGGGGTGCTCAGGTGCAACATTTGAGCAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ATGCTGGTGGGTGGAGATGTAGCTAACTGTTGTACCTaGCTACCTTGGCTTTTCATGGTGGCAGGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MLVGGDVANCCT*LPWLFMVAGGD Trigger: ATCTCCACCTGCCACCATGAAAAGCCAAGGTAGTCAGGTACAACAGTTAGCTACATCTCCACCCACCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ACCTTTGCCTTTCATGGTGGTGGGTGGAGACATCACTaGCTGTTGCACCTGAATACGTTGGCTCTTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFAFHGGGWRHH*LLHLNTLALHA Trigger: AGCATGAAGAGCCAACGTATTCAGGTGCAACAGTCAGTGATGTCTCCACCCACCACCATGAAAGGCAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | ACCTCTGCTTTCCTTGGTGGTGAATGGAGATGTCACTaGCTCTTGCACCTGAGCACCTCTGCTTTTCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSAFLGGEWRCH*LLHLSTSAFHG Trigger: ACCATGAAAAGCAGAGGTGCTCAGGTGCAAGAGTCAGTGACATCTCCATTCACCACCAAGGAAAGCAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CGAGGATGGGCTTGGTGGGAACCCCATGCTTACTCTTaGTGGTACCGTGTTCTTTCCTACTTGTTAGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: RGWAWWEPHAYS*WYRVLSYLLEF Trigger: GAATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TGCTCAAATGTTGCACCTGAGCACCCCTGCTTTTCATaGTTGTGGGTGGAGATGTTGATGACTCTTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: CSNVAPEHPCFS*LWVEMLMTLAP Trigger: AGGTGCAAGAGTCATCAACATCTCCACCCACAACCATGAAAAGCAGGGGTGCTCAGGTGCAACATTTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | CCGAGGATGGGCTTGGTGGGAACCCCATGCTTACTCTaGCTGGTACCGTGTTCTTTCCTACTTGTTAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: PRMGLVGTPCLL*LVPCSFLLVRI Trigger: AATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCAAATGTTGCACCTGAGCACCCCTGCTTTTCATGGTaGTGGGTGGAGATGTTGATGACTCTTGCACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNVAPEHPCFSW*WVEMLMTLAPE Trigger: CTCAGGTGCAAGAGTCATCAACATCTCCACCCACAACCATGAAAAGCAGGGGTGCTCAGGTGCAACATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TTGGTATCTTCCACTTGTGGAGTTTGTGGCAGCCCAAGGGCGGTTTaGGATCTGCTCTCTCTTGGAGTTTTCTCTCCAGCAGATAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVSSTCGVCGSPRAV*DLLSLGVFSPADNL Trigger: CAAGTTATCTGCTGGAGAGAAAACTCCAAGAGAGAGCAGATCCAAAACCGCCCTTGGGCTGCCACAAACTCCACAAGTGGAAGATACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | CTAGTCGTCCAGTCCTATCCAGTGAGATGCGTCTCTCTTTTTGTCTaGTTCCCATTTCAGACACATCTGTGGAAGAGGGACCTATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVVQSYPVRCVSLFV*FPFQTHLWKRDLCH Trigger: GTGGCATAGGTCCCTCTTCCACAGATGTGTCTGAAATGGGAACAAGACAAAAAGAGAGACGCATCTCACTGGATAGGACTGGACGACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | GGATGGGCTTGGTGGGAACCCCATGCTTACTCTTGCTaGTACCGTGTTCTTTCCTACTTGTTAGAATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GWAWWEPHAYSC*YRVLSYLLEFH Trigger: ATGGAATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TTGCACTTGACTACCTTGGCTTTTCATGCTGGTGGGTaGAGATGTAGCAAACTGTTGCACCTGAGCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHLTTLAFHAGG*RCSKLLHLSTF Trigger: AAAGGTGCTCAGGTGCAACAGTTTGCTACATCTCCACCCACCAGCATGAAAAGCCAAGGTAGTCAAGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GTAAAGTTTGGTTTCCTCTGGCCGTGGTCGTGTGCTTaGTGTCTAGAACCAGATGGCATAGCTTCTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VKFGFLWPWSCA*CLEPDGIASEL Trigger: CAACTCAGAAGCTATGCCATCTGGTTCTAGACACAAAGCACACGACCACGGCCAGAGGAAACCAAACTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TGTATGCCACCGAGGATGGGCTTGGTGGGAACCCCATGCTTACTCTaGCTGGTACCGTGTTCTTTCCTACTTGTTAGAATTCCATTACTA | + |
|
Preference number: 6 (lower is better) Translates to: CMPPRMGLVGTPCLL*LVPCSFLLVRIPLL Trigger: TAGTAATGGAATTCTAACAAGTAGGAAAGAACACGGTACCAGCAAGAGTAAGCATGGGGTTCCCACCAAGCCCATCCTCGGTGGCATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GTTGCTAGGGCTCATAGATACTTGGTCTGCCATCTTTaGGTTATAAGTCTGTATGCCACCGAGGATGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VARAHRYLVCHL*VISLYATEDGL Trigger: AAGCCCATCCTCGGTGGCATACAGACTTATAACTCAAAGATGGCAGACCAAGTATCTATGAGCCCTAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | GTCATAGATGGCCACTCTTGCAGGGGCAGAGTCCTTTaGATTTATGGCAAGCACAACCAAACTTGTAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VIDGHSCRGRVL*IYGKHNQTCKV Trigger: AACCTTACAAGTTTGGTTGTGCTTGCCATAAATGCAAAGGACTCTGCCCCTGCAAGAGTGGCCATCTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TGCTCAAATGGTGTAAAGTTTGGTTTCCTCTGGCCGTaGTCGTGTGCTTTGTGTCTAGAACCAGATGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: CSNGVKFGFLWP*SCALCLEPDGI Trigger: TATGCCATCTGGTTCTAGACACAAAGCACACGACCACGGCCAGAGGAAACCAAACTTTACACCATTTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TGCGTATTTGAGTTTACAGGAAAAGAAAAGATACCCTaGGGTGGAGCATCTGTCGGTGATCCTGGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CVFEFTGKEKIP*GGASVGDPGSP Trigger: TGGTGAACCAGGATCACCGACAGATGCTCCACCCCAGGGTATCTTTTCTTTTCCTGTAAACTCAAATACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | AATAGGTTGAGTAATGCGGTTTGCGTTTTCCTTGCATaGGTCAGGAGCAAGTTCCTTGGTGTCTTCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NRLSNAVCVFLA*VRSKFLGVFFA Trigger: GGCAAAGAAGACACCAAGGAACTTGCTCCTGACCCATGCAAGGAAAACGCAAACCGCATTACTCAACCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CTCCTTCTCAGGACTATTTTCCACAGTCTTAGCAACTaGAAAGTGGGTGAAGATTTCAAGAATCTGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLRTIFHSLSN*KVGEDFKNLPL Trigger: CAGGGGCAGATTCTTGAAATCTTCACCCACTTTGCAGTTGCTAAGACTGTGGAAAATAGTCCTGAGAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TGCTCACTACACCGGAGACCACATCTTCCAGAAATGTaGAGGAATAAGCACTACCATAAAGTAAGTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSLHRRPHLPEM*RNKHYHKVSPA Trigger: GGCAGGACTTACTTTATGGTAGTGCTTATTCCTCAACATTTCTGGAAGATGTGGTCTCCGGTGTAGTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TGGACTGAAGATCACATACATTTTCATTTAACCCACTaGCAGGGGCATTTCCTCCATAGGTACACTCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: WTEDHIHFHLTH*QGHFLHRYTHG Trigger: TCCGTGAGTGTACCTATGGAGGAAATGCCCCTGTCAGTGGGTTAAATGAAAATGTATGTGATCTTCAGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GTACGGTATAGGGAGATGCGGTCTGACATTCTTTACTaGCTGTTTGCACCACATTTTGGACCTTTTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRYREMRSDILY*LFAPHFGPFAQ Trigger: TTGAGCAAAAGGTCCAAAATGTGGTGCAAACAGTCAGTAAAGAATGTCAGACCGCATCTCCCTATACCGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | TTGCCTGACAATGCTTGGCTTAATGACCCCTCTTCTTaGATTACTGGCAAAGTCACTGGAACTGTGAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPDNAWLNDPSS*ITGKVTGTVNL Trigger: CAAATTCACAGTTCCAGTGACTTTGCCAGTAATGCAAGAAGAGGGGTCATTAAGCCAAGCATTGTCAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | AACCTCAGGAGGGGATGTAGGAGCTGGTTCTTTGGCTaGTTGTACTTCATCTTCTTTTTCTGGTCTAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: NLRRGCRSWFFG*LYFIFFFWSKY Trigger: GTATTTAGACCAGAAAAAGAAGATGAAGTACAAGCAGCCAAAGAACCAGCTCCTACATCCCCTCCTGAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | GAGTCAACTCACCACCAAAATAGTTCTGCAACTGGTTaGCAGTCACTTCTCGTAGAACTAAGTCAACTATGG | + |
|
Preference number: 6 (lower is better) Translates to: ESTHHQNSSATG*QSLLVELSQLW Trigger: CCATAGTTGACTTAGTTCTACGAGAAGTGACTGGCAACCAGTTGCAGAACTATTTTGGTGGTGAGTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | GTTTCACATCTAGTCGTCCAGTCCTATCCAGTGAGATaGGTCTCTCTTTTTGTCTTGTTCCCATTTCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VSHLVVQSYPVR*VSLFVLFPFQT Trigger: TGTCTGAAATGGGAACAAGACAAAAAGAGAGACGCATCTCACTGGATAGGACTGGACGACTAGATGTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | AGGAAGAAAGTTGTGAGTTTTTGTGACTTGCTCAAATaGTGTAAAGTTTGGTTTCCTCTGGCCGTGGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKKVVSFCDLLK*CKVWFPLAVVV Trigger: CACGACCACGGCCAGAGGAAACCAAACTTTACACCATTTGAGCAAGTCACAAAAACTCACAACTTTCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TTGGACCAAGTTCATGATCAGCGAAAACAATGGTCTTaGTTTCCTCCACAGTCTCTGTTGTCATTTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LDQVHDQRKQWS*FPPQSLLSFGV Trigger: AACCCCAAATGACAACAGAGACTGTGGAGGAAACCAAGACCATTGTTTTCGCTGATCATGAACTTGGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TCAGGACTATTTTCCACAGTCTTAGCAACTGCAAAGTaGGTGAAGATTTCAAGAATCTGCCCCTGCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLFSTVLATAK*VKISRICPCSL Trigger: CAATGAGCAGGGGCAGATTCTTGAAATCTTCACCCACTTTGCAGTTGCTAAGACTGTGGAAAATAGTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GAGCATTTCAACAATTTCCCGTCCAAACATATTGATTaGCGCATTTGTGTCCTCGGCTCTAGTAGAGACACC | + |
|
Preference number: 6 (lower is better) Translates to: EHFNNFPSKHID*RICVLGSSRDT Trigger: GGTGTCTCTACTAGAGCCGAGGACACAAATGCGCAAATCAATATGTTTGGACGGGAAATTGTTGAAATGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GACTCTACAACTTTATTGGGATCAGTGAACCACCCTTaGTTTTTATGGCACTTGGGGTGGTCTGTCTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DSTTLLGSVNHP*FLWHLGWSVSL Trigger: TAAGGAGACAGACCACCCCAAGTGCCATAAAAACAAAGGGTGGTTCACTGATCCCAATAAAGTTGTAGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | CTCAGGAGGGGATGTAGGAGCTGGTTCTTTGGCTGCTaGTACTTCATCTTCTTTTTCTGGTCTAAATACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRGCRSWFFGC*YFIFFFWSKYL Trigger: AAGGTATTTAGACCAGAAAAAGAAGATGAAGTACAAGCAGCCAAAGAACCAGCTCCTACATCCCCTCCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCTTTAACCTCAGGAGGGGATGTAGGAGCTGGTTCTTaGGCTGCTTGTACTTCATCTTCTTTTTCTGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLTSGGDVGAGS*AACTSSSFSGL Trigger: TAGACCAGAAAAAGAAGATGAAGTACAAGCAGCCAAAGAACCAGCTCCTACATCCCCTCCTGAGGTTAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TTCTCAATTGATGGTATTTTCTCTAAGGCAGGCAACTaGTCAGGAGAGGACTGTTCGGGTGTTTTCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: FSIDGIFSKAGN*SGEDCSGVFCT Trigger: TGTGCAGAAAACACCCGAACAGTCCTCTCCTGACAAGTTGCCTGCCTTAGAGAAAATACCATCAATTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | CAGTTCCTTGGAACCAATGTTTGGTGGGAAGGTTTTTaGTCAAAGACTCTTCAAAATGGGAGCACTGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: QFLGTNVWWEGF*SKTLQNGSTGL Trigger: TAGACCAGTGCTCCCATTTTGAAGAGTCTTTGATCAAAAACCTTCCCACCAAACATTGGTTCCAAGGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TCCTCCATAGGTACACTCACGGAAAGAAACATTGGCTaGAAGGATGATGGTTTTGCCTCTGTTTTCACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SSIGTLTERNIG*KDDGFASVFTY Trigger: GTAAGTGAAAACAGAGGCAAAACCATCATCCTTTCAGCCAATGTTTCTTTCCGTGAGTGTACCTATGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TCTTTACTTGCTTTCTCTTTAGCAGCGATGTCTCTGTaGCCTGATGAGGATAAATCCTTTGCTGGAACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLAFSLAAMSL*PDEDKSFAGTS Trigger: GCTTGTTCCAGCAAAGGATTTATCCTCATCAGGTCACAGAGACATCGCTGCTAAAGAGAAAGCAAGTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CTCTGTCAATGCGGAGTAAGCGTTGTTCCTCTGCTGTaGGCTCAAGTTGTTCCAATTCTTTACTTATCATAT | + |
|
Preference number: 6 (lower is better) Translates to: LCQCGVSVVPLL*AQVVPILYLSY Trigger: ATATGATAAGTAAAGAATTGGAACAACTTGAGCGCACAGCAGAGGAACAACGCTTACTCCGCATTGACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136202.2 ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | AGCATTTCAACAATTTCCCGTCCAAACATATTGATTTaGGCATTTGTGTCCTCGGCTCTAGTAGAGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: SISTISRPNILI*AFVSSALVETP Trigger: AGGTGTCTCTACTAGAGCCGAGGACACAAATGCGCAAATCAATATGTTTGGACGGGAAATTGTTGAAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CCA 72 bp | CTACAATCTCCGAAGCGACTGAACATATGTCAACATTaGAGAGCAACTCTTCTCTTTCCGTTTCAGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQSPKRLNICQH*RATLLFPFQSD Trigger: ATCAGACTGAAACGGAAAGAGAAGAGTTGCTCTCCAATGTTGACATATGTTCAGTCGCTTCGGAGATTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | ACTTTATTGGGATCAGTGAACCACCCTTTGTTTTTATaGCACTTGGGGTGGTCTGTCTCCTTAAGATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLLGSVNHPLFL*HLGWSVSLRFG Trigger: ACCAAATCTTAAGGAGACAGACCACCCCAAGTGCCATAAAAACAAAGGGTGGTTCACTGATCCCAATAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TGCTTGGATAAGCGACGATCACTCAGACTTGAGATGTaGATTGGAGAAGCCAAATTGTCGTTGTTTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CLDKRRSLRLEM*IGEAKLSLFVA Trigger: TGCTACAAACAACGACAATTTGGCTTCTCCAATCAACATCTCAAGTCTGAGTGATCGTCGCTTATCCAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GCTTTGTGTCTAGAACCAGATGGCATAGCTTCTGAGTaGGACCTTCCCATTGGCTCTAAACTTTTATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALCLEPDGIASE*DLPIGSKLLFV Trigger: CACAAATAAAAGTTTAGAGCCAATGGGAAGGTCCAACTCAGAAGCTATGCCATCTGGTTCTAGACACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 72 bp | ACTCCCTTGAGGAAGAAAGTTGTGAGTTTTTGTGACTaGCTCAAATGGTGTAAAGTTTGGTTTCCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPLRKKVVSFCD*LKWCKVWFPLA Trigger: GGCCAGAGGAAACCAAACTTTACACCATTTGAGCAAGTCACAAAAACTCACAACTTTCTTCCTCAAGGGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 72 bp | TTGGCCATTTCCTCCATGGTTGAAGCAAATGATAGGTaGTCTATGTCAAGTGACTCGGGAACAGTTTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAISSMVEANDR*SMSSDSGTVFG Trigger: ACCAAAAACTGTTCCCGAGTCACTTGACATAGACAACCTATCATTTGCTTCAACCATGGAGGAAATGGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TATAGTCTTAATTCTGCAACTGGTAATTTTGTTTTCAGTGTGGTTTaGGTATCTTCCACTTGTGGAGTTTGTGGCAGCCCAAGGGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: YSLNSATGNFVFSVV*VSSTCGVCGSPRAV Trigger: AACCGCCCTTGGGCTGCCACAAACTCCACAAGTGGAAGATACCAAAACCACACTGAAAACAAAATTACCAGTTGCAGAATTAAGACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TGGTCGTGTGCTTTGTGTCTAGAACCAGATGGCATAGCTTCTGAGTaGGACCTTCCCATTGGCTCTAAACTTTTATTTGTGTTTTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: WSCALCLEPDGIASE*DLPIGSKLLFVFST Trigger: TGTAGAAAACACAAATAAAAGTTTAGAGCCAATGGGAAGGTCCAACTCAGAAGCTATGCCATCTGGTTCTAGACACAAAGCACACGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TTCGTGCATTTGGCCATTTCCTCCATGGTTGAAGCAAATGATAGGTaGTCTATGTCAAGTGACTCGGGAACAGTTTTTGGTCCAGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: FVHLAISSMVEANDR*SMSSDSGTVFGPEF Trigger: AAATTCTGGACCAAAAACTGTTCCCGAGTCACTTGACATAGACAACCTATCATTTGCTTCAACCATGGAGGAAATGGCCAAATGCACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | ATGCCCTGGTGTTTCTTCAGTTCTTTGTGTTATAGAAAGAGGCTGTaGGAACTGTGGTTTTGGAAAAATGTCATAGATGGCCACTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: MPWCFFSSLCYRKRL*ELWFWKNVIDGHSC Trigger: GCAAGAGTGGCCATCTATGACATTTTTCCAAAACCACAGTTCCAACAGCCTCTTTCTATAACACAAAGAACTGAAGAAACACCAGGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | CCAACAGCTCTGACATATAATCTCCTTGAAATTGTTCACAGTCCATaGGTGCCTCACGATAATCAAAACCTCCACCTTGAACACTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PTALTYNLLEIVHSP*VPHDNQNLHLEHLE Trigger: TTCCAAGTGTTCAAGGTGGAGGTTTTGATTATCGTGAGGCACCAATGGACTGTGAACAATTTCAAGGAGATTATATGTCAGAGCTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | CTTCTCAAGCATGTTTTCTACAATCTCCGAAGCGACTaGACATATGTCAACATTGGAGAGCAACTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLKHVFYNLRSD*TYVNIGEQLFS Trigger: AGAGAAGAGTTGCTCTCCAATGTTGACATATGTTCAGTCGCTTCGGAGATTGTAGAAAACATGCTTGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GCAAGGACGTTTTCCAGAATTGCTTTGGAAATGAGCTaGGTGTTAGACATTGTTGGAGGATCCTTATCTATG | + |
|
Preference number: 6 (lower is better) Translates to: ARTFSRIALEMS*VLDIVGGSLSM Trigger: CATAGATAAGGATCCTCCAACAATGTCTAACACTCAGCTCATTTCCAAAGCAATTCTGGAAAACGTCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GTCACCAAGAATGTCATAAACAGTATGATCAGTCACTaGATTAGAACAAGAGGCAGCTGGCAAATCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTKNVINSMISH*IRTRGSWQITR Trigger: TCTGGTGATTTGCCAGCTGCCTCTTGTTCTAATTCAGTGACTGATCATACTGTTTATGACATTCTTGGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | GGAGCACTGGTCTATCAGTGTACCAATGATCTCACTTaGAGTGATATTTTCTTTCAGTATGCTAACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GALVYQCTNDLT*SDIFFQYANWR Trigger: TCTCCAGTTAGCATACTGAAAGAAAATATCACTGCAAGTGAGATCATTGGTACACTGATAGACCAGTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | AAGACATTTGATACCAGGAGTCCATCTGTTCTGGATTaGCATGATCCACTAAACAGGGAAGTTGATTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: KTFDTRSPSVLD*HDPLNREVDYQ Trigger: CTGATAATCAACTTCCCTGTTTAGTGGATCATGGCAATCCAGAACAGATGGACTCCTGGTATCAAATGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CCACATCAGATTCAGCTTGGCCTGGTTCATGAAAAATaGAGTTGTCATCTTTACCAATTTCAAATTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PHQIQLGLVHEK*SCHLYQFQIVG Trigger: GCCCACAATTTGAAATTGGTAAAGATGACAACTGCATTTTTCATGAACCAGGCCAAGCTGAATCTGATGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | ATCAGAAGAAGTCACTCCTGGACAGAACATGTACTTTaGTTTTATGGAAGCCTGATGTGCCTTATCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: IRRSHSWTEHVL*FYGSLMCLISI Trigger: AATGCTGATAAGGCACATCAGGCTTCCATAAAAGCAAAGTACATGTTCTGTCCAGGAGTGACTTCTTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | TGGAACAAGCTGTGCAGAATCTTTAAGGATAACCAGTaGTTTATCACTTGTGAGGCTTCTGCTGTATATTGG | + |
|
Preference number: 6 (lower is better) Translates to: WNKLCRIFKDNQ*FITCEASAVYW Trigger: CCAATATACAGCAGAAGCCTCACAAGTGATAAAGCACTGGTTATCCTTAAAGATTCTGCACAGCTTGTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CTATGCCACGTATGGAATTTCTTCTCAGCTCTGCTATaGTACATCCAGTTCTCTTTAAACAGTCCATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LCHVWNFFSALL*YIQFSLNSPSE Trigger: TTCAGATGGACTGTTTAAAGAGAACTGGATGTAGCATAGCAGAGCTGAGAAGAAATTCCATACGTGGCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | CAGTGCTTTATCACTTGTGAGGCTTCTGCTGTATATTaGTCTGGAAAAATCCAATGGCTCTTGAGAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: QCFITCEASAVY*SGKIQWLLRRY Trigger: GTATCTTCTCAAGAGCCATTGGATTTTTCCAGACCAATATACAGCAGAAGCCTCACAAGTGATAAAGCACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCAAAGAGCATTTCAACAATTTCCCGTCCAAACATATaGATTTGCGCATTTGTGTCCTCGGCTCTAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKSISTISRPNI*ICAFVSSALVE Trigger: CTCTACTAGAGCCGAGGACACAAATGCGCAAATCAATATGTTTGGACGGGAAATTGTTGAAATGCTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | AATCAGAAGAAGTCACTCCTGGACAGAACATGTACTTaGCTTTTATGGAAGCCTGATGTGCCTTATCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NQKKSLLDRTCT*LLWKPDVPYQH Trigger: ATGCTGATAAGGCACATCAGGCTTCCATAAAAGCAAAGTACATGTTCTGTCCAGGAGTGACTTCTTCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | AAGTGGGTGAAGATTTCAAGAATCTGCCCCTGCTCATaGACTAGGACTAAGTTCTCTTTCCCAGTTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: KWVKISRICPCS*TRTKFSFPVSL Trigger: TAATGAAACTGGGAAAGAGAACTTAGTCCTAGTCAATGAGCAGGGGCAGATTCTTGAAATCTTCACCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | ATAGGGAGATGCGGTCTGACATTCTTTACTGACTGTTaGCACCACATTTTGGACCTTTTGCTCAACATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IGRCGLTFFTDC*HHILDLLLNIF Trigger: AAAGATGTTGAGCAAAAGGTCCAAAATGTGGTGCAAACAGTCAGTAAAGAATGTCAGACCGCATCTCCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TTATTTAACTCAGGCTTTGTTAAACTGGTTGTGTCTTaGCTAGCGGGACCAGGTGTCTTTACTAGTTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFNSGFVKLVVS*LAGPGVFTSLA Trigger: GGCTAAACTAGTAAAGACACCTGGTCCCGCTAGCAAAGACACAACCAGTTTAACAAAGCCTGAGTTAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | AAGAGTGTATTCTGTCCATCGTCTTTGGATATAATAGTGCCTGGCTaGGACTCATCACCAAACTTTCTAAATGGTAACTTTGGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: KSVFCPSSLDIIVPG*DSSPNFLNGNFGSI Trigger: GATGCTGCCAAAGTTACCATTTAGAAAGTTTGGTGATGAGTCCAAGCCAGGCACTATTATATCCAAAGACGATGGACAGAATACACTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TTGTTCACAGTCCATTGGTGCCTCACGATAATCAAAACCTCCACCTaGAACACTTGGAAGAACTTTGACATGTTGACATTCTTCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LFTVHWCLTIIKTST*NTWKNFDMLTFFWY Trigger: ATACCAGAAGAATGTCAACATGTCAAAGTTCTTCCAAGTGTTCAAGGTGGAGGTTTTGATTATCGTGAGGCACCAATGGACTGTGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | GAAATATTTTGCTCACTACACCGGAGACCACATCTTCCAGAAATGTaGAGGAATAAGCACTACCATAAAGTAAGTCCTGCCTGTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: EIFCSLHRRPHLPEM*RNKHYHKVSPACHH Trigger: ATGATGACAGGCAGGACTTACTTTATGGTAGTGCTTATTCCTCAACATTTCTGGAAGATGTGGTCTCCGGTGTAGTGAGCAAAATATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | ATTTCACATATGCATGTCAATAACGGACTTTCCATAATGTCATCATaGACACTGGTGACACGGGACTCTACAACTTTATTGGGATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISHMHVNNGLSIMSS*TLVTRDSTTLLGSV Trigger: CACTGATCCCAATAAAGTTGTAGAGTCCCGTGTCACCAGTGTCAATGATGACATTATGGAAAGTCCGTTATTGACATGCATATGTGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | GGAACAATTGGAGATCTATGTGGTTCTTTGAGTTTCACTTCAATTTaGCTTAAGGTTCTCTCTAGACCCATCTGGTCAGTAGAAAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTIGDLCGSLSFTSI*LKVLSRPIWSVERV Trigger: AACCCTTTCTACTGACCAGATGGGTCTAGAGAGAACCTTAAGCAAAATTGAAGTGAAACTCAAAGAACCACATAGATCTCCAATTGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | CTGTGCCTTAACAAACGTTCTTGGTCCTTAATAGAATaGGTGTTGTCCTGTAACAACCAGTTTTGGAATCGT | + |
|
Preference number: 6 (lower is better) Translates to: LCLNKRSWSLIE*VLSCNNQFWNR Trigger: ACGATTCCAAAACTGGTTGTTACAGGACAACACTCATTCTATTAAGGACCAAGAACGTTTGTTAAGGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | AAAGCAGAAGCTCCTTTGCCAGTTTGGCTTCCTAAGTaGCTAGATGAATCAGAAGACATATCCTTAAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: KAEAPLPVWLPK*LDESEDISLSI Trigger: TATGCTTAAGGATATGTCTTCTGATTCATCTAGTCACTTAGGAAGCCAAACTGGCAAAGGAGCTTCTGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | AGCTCATTAGTGCAGCATGTTTTTGTGCCTTTTCAATaGTTCTGTTTGTGTCTAAATCTCCATGTGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLVQHVFVPFQ*FCLCLNLHVQQ Trigger: CTGCTGCACATGGAGATTTAGACACAAACAGAATCATTGAAAAGGCACAAAAACATGCTGCACTAATGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | TTGATATGTTTGGTCAATAACTGTTCTTTCCACGTGTaGAGAAGGAGGTTTCAAAGGTGTAGGTGGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LICLVNNCSFHV*RRRFQRCRWFL Trigger: AAGAAACCACCTACACCTTTGAAACCTCCTTCTGCACACGTGGAAAGAACAGTTATTGACCAAACATATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CATATAATCTCCTTGAAATTGTTCACAGTCCATTGGTaGCTCACGATAATCAAAACCTCCACCTTGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: HIISLKLFTVHW*LTIIKTSTLNT Trigger: AGTGTTCAAGGTGGAGGTTTTGATTATCGTGAGGCACCAATGGACTGTGAACAATTTCAAGGAGATTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TTTAGACTTAGACACTGTGTGAGGGCTTTCATTAAATaGAGCGACGTGGCCTATGATTTCCATTATCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FRLRHCVRAFIK*SDVAYDFHYLL Trigger: CAAAAGATAATGGAAATCATAGGCCACGTCGCTCCATTTAATGAAAGCCCTCACACAGTGTCTAAGTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | AGTTCTTTGTGTTATAGAAAGAGGCTGTTGGAACTGTaGTTTTGGAAAAATGTCATAGATGGCCACTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCYRKRLLEL*FWKNVIDGHSC Trigger: GCAAGAGTGGCCATCTATGACATTTTTCCAAAACCACAGTTCCAACAGCCTCTTTCTATAACACAAAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TGCCTCACGATAATCAAAACCTCCACCTTGAACACTTaGAAGAACTTTGACATGTTGACATTCTTCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CLTIIKTSTLNT*KNFDMLTFFWY Trigger: ATACCAGAAGAATGTCAACATGTCAAAGTTCTTCCAAGTGTTCAAGGTGGAGGTTTTGATTATCGTGAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | AAATGGCATGTACCATATCATCTGCAACATCACACATaGGCTCCAAAGTATAACTCAGTGTCTCTTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KWHVPYHLQHHT*APKYNSVSLLK Trigger: CTTCAGAAGAGACACTGAGTTATACTTTGGAGCCAATGTGTGATGTTGCAGATGATATGGTACATGCCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | ATGCATGTCAATAACGGACTTTCCATAATGTCATCATaGACACTGGTGACACGGGACTCTACAACTTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: MHVNNGLSIMSS*TLVTRDSTTLL Trigger: CAATAAAGTTGTAGAGTCCCGTGTCACCAGTGTCAATGATGACATTATGGAAAGTCCGTTATTGACATGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GGAGATCTATGTGGTTCTTTGAGTTTCACTTCAATTTaGCTTAAGGTTCTCTCTAGACCCATCTGGTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GDLCGSLSFTSI*LKVLSRPIWSV Trigger: TACTGACCAGATGGGTCTAGAGAGAACCTTAAGCAAAATTGAAGTGAAACTCAAAGAACCACATAGATCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCACGGAAAGAAACATTGGCTGAAAGGATGATGGTTTaGCCTCTGTTTTCACTTACATGTCTTTCAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRKETLAERMMV*PLFSLTCLSVM Trigger: CATGACTGAAAGACATGTAAGTGAAAACAGAGGCAAAACCATCATCCTTTCAGCCAATGTTTCTTTCCGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GTAAACTGTGGCAATGCGGTAGCTTTTTCCTTCTCTTaGTATCCCACCAAATCTTCACTTGATATGGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: VNCGNAVAFSFS*YPTKSSLDMVN Trigger: GTTAACCATATCAAGTGAAGATTTGGTGGGATACAAAGAGAAGGAAAAAGCTACCGCATTGCCACAGTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | GCATCTGTGACGCCTGCACTTGGTCCTGATAGAAGATaGATGATATTACTTTTCATAATGGTAGCTATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASVTPALGPDRR*MILLFIMVAIE Trigger: CTCTATAGCTACCATTATGAAAAGTAATATCATCAATCTTCTATCAGGACCAAGTGCAGGCGTCACAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TTGTTCACCAGTTCAGCGATCACGTCTTCTAGAAACTaGGCAGGAACAATTTTAGATTTACTTTCTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFTSSAITSSRN*AGTILDLLSDG Trigger: GCCATCAGAAAGTAAATCTAAAATTGTTCCTGCCAAGTTTCTAGAAGACGTGATCGCTGAACTGGTGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | AAGCGACGATCACTCAGACTTGAGATGTTGATTGGAGAAGCCAAATaGTCGTTGTTTGTAGCATATAACTCTTGTAACACTGCATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: KRRSLRLEMLIGEAK*SLFVAYNSCNTALT Trigger: TGTTAATGCAGTGTTACAAGAGTTATATGCTACAAACAACGACAATTTGGCTTCTCCAATCAACATCTCAAGTCTGAGTGATCGTCGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TCTTTCAGTATGCTAACTGGAGATGGTTCCATTTGGCTTATTTCTTaGTCTAGCTTATTCTTGATTATCCTAAGCATGCCACTGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSMLTGDGSIWLIS*SSLFLIILSMPLTA Trigger: TGCTGTCAGTGGCATGCTTAGGATAATCAAGAATAAGCTAGACAAAGAAATAAGCCAAATGGAACCATCTCCAGTTAGCATACTGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 90 bp | ATTCCAGGAACATTAACGGGTGGAAATGGTCTTTTAGACTTAAGATaGTTAAATGGTCTAGTGCCAGTGACTCTATACTTTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IPGTLTGGNGLLDLR*LNGLVPVTLYFSSG Trigger: CCCTGAAGAAAAGTATAGAGTCACTGGCACTAGACCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCCGTTAATGTTCCTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | GAGTCATTTGTAAACTGTGGCAATGCGGTAGCTTTTTCCTTCTCTTaGTATCCCACCAAATCTTCACTTGATATGGTTAACTGTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ESFVNCGNAVAFSFS*YPTKSSLDMVNCEQ Trigger: TTGTTCACAGTTAACCATATCAAGTGAAGATTTGGTGGGATACAAAGAGAAGGAAAAAGCTACCGCATTGCCACAGTTTACAAATGACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | AATACTAGTTTGTTCACCAGTTCAGCGATCACGTCTTCTAGAAACTaGGCAGGAACAATTTTAGATTTACTTTCTGATGGCTTAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: NTSLFTSSAITSSRN*AGTILDLLSDGLGW Trigger: CCATCCTAAGCCATCAGAAAGTAAATCTAAAATTGTTCCTGCCAAGTTTCTAGAAGACGTGATCGCTGAACTGGTGAACAAACTAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | GGCAGTATCAAAAGGAGCTACATGAGTGGGATGAACTaGTGTAAAGGCATTTTTAATGGTATTAGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSIKRSYMSGMN*CKGIFNGIRNV Trigger: CACATTCCTAATACCATTAAAAATGCCTTTACATCAGTTCATCCCACTCATGTAGCTCCTTTTGATACTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TTCCCAGATTTAGCAACAACAGAAGCACCACCAAAATaGGGTAATTTACTTGAATGTGAGCCTTCACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: FPDLATTEAPPK*GNLLECEPSPY Trigger: ATATGGTGAAGGCTCACATTCAAGTAAATTACCTCATTTTGGTGGTGCTTCTGTTGTTGCTAAATCTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 72 bp | CTTCAAATGTGTGATCACAGATGTCGTAACATGTCTTaGAACCAAATGCATTTCATTTGGACCAAGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQMCDHRCRNMS*NQMHFIWTKFM Trigger: CATGAACTTGGTCCAAATGAAATGCATTTGGTTGCAAGACATGTTACGACATCTGTGATCACACATTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CTAAACAGGGAAGTTGATTATCAGAATATGAATCTTTaGCTGACAATGCTTGGCTTAATGACCCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNREVDYQNMNL*LTMLGLMTPLL Trigger: AAGAAGAGGGGTCATTAAGCCAAGCATTGTCAGGCAAAGATTCATATTCTGATAATCAACTTCCCTGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TGGTTTCTTTATTGGCATGTCACTGGCAAATGTACATaGATCTACTGGAAGTGTTTTAGCTGTGTAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WFLYWHVTGKCT*IYWKCFSCVVS Trigger: AGAAACTACACAGCTAAAACACTTCCAGTAGATCCATGTACATTTGCCAGTGACATGCCAATAAAGAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | GGGTGGAAATGGTCTTTTAGACTTAAGATTGTTAAATaGTCTAGTGCCAGTGACTCTATACTTTTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GWKWSFRLKIVK*SSASDSILFFR Trigger: CCTGAAGAAAAGTATAGAGTCACTGGCACTAGACCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TTTACACGCTTTGGTTCACATTTTCCAGATCTTAACTaGGAAGTCTTTTCATGCTCCATGTTGAGAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FTRFGSHFPDLN*EVFSCSMLRED Trigger: ATCTTCTCTCAACATGGAGCATGAAAAGACTTCCCAGTTAAGATCTGGAAAATGTGAACCAAAGCGTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCTCTTGGAGTTTTCTCTCCAGCAGATAACTTGTTCTaGATTTTGGTCTTAGTACTGCTAATACCAAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLGVFSPADNLF*ILVLVLLIPRC Trigger: ACACCTTGGTATTAGCAGTACTAAGACCAAAATCAAGAACAAGTTATCTGCTGGAGAGAAAACTCCAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TTCTGTCCATCGTCTTTGGATATAATAGTGCCTGGCTaGGACTCATCACCAAACTTTCTAAATGGTAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FCPSSLDIIVPG*DSSPNFLNGNF Trigger: AAAGTTACCATTTAGAAAGTTTGGTGATGAGTCCAAGCCAGGCACTATTATATCCAAAGACGATGGACAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | AGGATCAGATGCAAAGCTAGCTTTCTTTTGCTCAGTTaGTTGATGGACTTTATGTATTGGCTCTGTCTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RIRCKASFLLLS*LMDFMYWLCLS Trigger: ACTAAGACAGAGCCAATACATAAAGTCCATCAACAAACTGAGCAAAAGAAAGCTAGCTTTGCATCTGATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | CCCATCTGGTCAGTAGAAAGGGTTCTAGTTTCCTCATaGAATGATGTGGCATCTCTGATAAGTTCTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: PIWSVERVLVSS*NDVASLISSLF Trigger: AAATAAAGAACTTATCAGAGATGCCACATCATTCAATGAGGAAACTAGAACCCTTTCTACTGACCAGATGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | AGTTCATCAATAATTTTCACCACCTTTTCCATAATCTaGACCGCTTCTAGGGCTAACTCTGAACTTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSIIFTTFSII*TASRANSELES Trigger: GCTTTCAAGTTCAGAGTTAGCCCTAGAAGCGGTCAAGATTATGGAAAAGGTGGTGAAAATTATTGATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | TGGGAACCTGCTCTTGTGAACTTGATTTCTCATCATTaGAAGATGAATCAAGCACACTTTGCACAAAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WEPALVNLISHH*KMNQAHFAQSY Trigger: ATAACTTTGTGCAAAGTGTGCTTGATTCATCTTTCAATGATGAGAAATCAAGTTCACAAGAGCAGGTTCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | GCATTTATGGCAAGCACAACCAAACTTGTAAGGTTATaGAGCACAATATCCACTATATCTTTGGACACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AFMASTTKLVRL*STISTISLDTK Trigger: TTTGGTGTCCAAAGATATAGTGGATATTGTGCTTCATAACCTTACAAGTTTGGTTGTGCTTGCCATAAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS TCA 72 bp | AGAACATCCACATCAGATTCAGCTTGGCCTGGTTCATaGAAAATGCAGTTGTCATCTTTACCAATTTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RTSTSDSAWPGS*KMQLSSLPISN Trigger: ATTTGAAATTGGTAAAGATGACAACTGCATTTTTCATGAACCAGGCCAAGCTGAATCTGATGTGGATGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | CTGAGAGATGCTCACAAAACTGACAAACTGAAGAATTaGTGTAAATGCTTATTAGAGGCTGATTTGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRDAHKTDKLKN*CKCLLEADLHH Trigger: ATGATGCAAATCAGCCTCTAATAAGCATTTACAGCAATTCTTCAGTTTGTCAGTTTTGTGAGCATCTCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS GCA 72 bp | TTTACTGACTCATCAATGTCAGGATCTAGTCCATGCTaGTTCAAAACATTCTTATATACTGAGGTCACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FTDSSMSGSSPC*FKTFLYTEVTS Trigger: ACTTGTGACCTCAGTATATAAGAATGTTTTGAAGCAGCATGGACTAGATCCTGACATTGATGAGTCAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CCA 72 bp | TCTCTGCAGCTGGTAAAAATGGGTTCTACAAGCTCTTaGCTAGTAACTGTTCTAGTTGTTAATTTTAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SLQLVKMGSTSS*LVTVLVVNFRT Trigger: TGTTCTAAAATTAACAACTAGAACAGTTACTAGCCAAGAGCTTGTAGAACCCATTTTTACCAGCTGCAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TCACTCAGACTTGAGATGTTGATTGGAGAAGCCAAATaGTCGTTGTTTGTAGCATATAACTCTTGTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: SLRLEMLIGEAK*SLFVAYNSCNT Trigger: AGTGTTACAAGAGTTATATGCTACAAACAACGACAATTTGGCTTCTCCAATCAACATCTCAAGTCTGAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | ATCAGATGCAAAGCTAGCTTTCTTTTGCTCAGTTTGTaGATGGACTTTATGTATTGGCTCTGTCTTAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IRCKASFLLLSL*MDFMYWLCLSL Trigger: CAAACTAAGACAGAGCCAATACATAAAGTCCATCAACAAACTGAGCAAAAGAAAGCTAGCTTTGCATCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TTGGGGTGGTCTGTCTCCTTAAGATTTGGTTTTGTTTaGTTGATTTCTAGCTCACTTTGTATAGCATGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGWSVSLRFGFV*LISSSLCIACK Trigger: TTTGCATGCTATACAAAGTGAGCTAGAAATCAACAAAACAAAACCAAATCTTAAGGAGACAGACCACCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 72 bp | TGTTTCTTCAGTTCTTTGTGTTATAGAAAGAGGCTGTaGGAACTGTGGTTTTGGAAAAATGTCATAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CFFSSLCYRKRL*ELWFWKNVIDG Trigger: GCCATCTATGACATTTTTCCAAAACCACAGTTCCAACAGCCTCTTTCTATAACACAAAGAACTGAAGAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
||
| CDS CAA 90 bp | TTGATTAGCAGGATCAGATGCAAAGCTAGCTTTCTTTTGCTCAGTTaGTTGATGGACTTTATGTATTGGCTCTGTCTTAGTTTGTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LISRIRCKASFLLLS*LMDFMYWLCLSLLK Trigger: TTTCAACAAACTAAGACAGAGCCAATACATAAAGTCCATCAACAAACTGAGCAAAAGAAAGCTAGCTTTGCATCTGATCCTGCTAATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | TTTCACAATTTGATTAGCAGGATCAGATGCAAAGCTAGCTTTCTTTaGCTCAGTTTGTTGATGGACTTTATGTATTGGCTCTGTCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: FHNLISRIRCKASFL*LSLLMDFMYWLCLS Trigger: ACTAAGACAGAGCCAATACATAAAGTCCATCAACAAACTGAGCAAAAGAAAGCTAGCTTTGCATCTGATCCTGCTAATCAAATTGTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | CGATCACTCAGACTTGAGATGTTGATTGGAGAAGCCAAATTGTCGTaGTTTGTAGCATATAACTCTTGTAACACTGCATTAACAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: RSLRLEMLIGEAKLS*FVAYNSCNTALTIL Trigger: TAAAATTGTTAATGCAGTGTTACAAGAGTTATATGCTACAAACAACGACAATTTGGCTTCTCCAATCAACATCTCAAGTCTGAGTGATCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 90 bp | TCTTTCTTTGCATCTGTGACGCCTGCACTTGGTCCTGATAGAAGATaGATGATATTACTTTTCATAATGGTAGCTATAGAGTTAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: SFFASVTPALGPDRR*MILLFIMVAIELSI Trigger: AATACTTAACTCTATAGCTACCATTATGAAAAGTAATATCATCAATCTTCTATCAGGACCAAGTGCAGGCGTCACAGATGCAAAGAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 90 bp | TCATTTGTATCTGTAGTTTTATCAGAGATAAATGTAAATACTAGTTaGTTCACCAGTTCAGCGATCACGTCTTCTAGAAACTTGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SFVSVVLSEINVNTS*FTSSAITSSRNLAG Trigger: TCCTGCCAAGTTTCTAGAAGACGTGATCGCTGAACTGGTGAACAAACTAGTATTTACATTTATCTCTGATAAAACTACAGATACAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | GGCAGCATCTTTTTGCTTAATTGTCTTTGTTGGGCTTaGAAGAGATTGTCTATTGGCATTTTCACTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: GSIFLLNCLCWA*KRLSIGIFTIS Trigger: TGAAATAGTGAAAATGCCAATAGACAATCTCTTTCAAGCCCAACAAAGACAATTAAGCAAAAAGATGCTGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS TCA 72 bp | ATTTGTACCCATAACTACTTGTTCAAAATTTGCTTCTaGGTGTTTTGCAGGTATACCATATTTCAGGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ICTHNYLFKICF*VFCRYTIFQGR Trigger: CCTACCCTGAAATATGGTATACCTGCAAAACACTCAGAAGCAAATTTTGAACAAGTAGTTATGGGTACAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | ATCACATTAAGTATACAGTCTGATGATAATAAATCTTaGTCAACGTCTGCCAGATTTTCCAACAGCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: ITLSIQSDDNKS*STSARFSNSSD Trigger: GTCAGAGCTGTTGGAAAATCTGGCAGACGTTGATCAAGATTTATTATCATCAGACTGTATACTTAATGTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | GAAATCTCTGCTGCAATCGTTTTTACTAAATTTGATTaGAGGAAGTCGAGTTGTGTCAACACATTTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EISAAIVFTKFD*RKSSCVNTFSG Trigger: TCCAGAAAATGTGTTGACACAACTCGACTTCCTTCAATCAAATTTAGTAAAAACGATTGCAGCAGAGATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS GCA 72 bp | TATCTCTTCTTTCACAATTTGATTAGCAGGATCAGATaGAAAGCTAGCTTTCTTTTGCTCAGTTTGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: YLFFHNLISRIR*KASFLLLSLLM Trigger: CATCAACAAACTGAGCAAAAGAAAGCTAGCTTTGCATCTGATCCTGCTAATCAAATTGTGAAAGAAGAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 72 bp | ATAAAGGACCATTCCAGGAACATTAACGGGTGGAAATaGTCTTTTAGACTTAAGATTGTTAAATGGTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: IKDHSRNINGWK*SFRLKIVKWSS Trigger: ACTAGACCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCCGTTAATGTTCCTGGAATGGTCCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 72 bp | TTCAGAATAAAGGACCATTCCAGGAACATTAACGGGTaGAAATGGTCTTTTAGACTTAAGATTGTTAAATGG | + |
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Preference number: 6 (lower is better) Translates to: FRIKDHSRNING*KWSFRLKIVKW Trigger: CCATTTAACAATCTTAAGTCTAAAAGACCATTTCCACCCGTTAATGTTCCTGGAATGGTCCTTTATTCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CCA 72 bp | TGTAACAATGTCCATTATTTCTGCTATTGCTCTCTCTaGGGTTTCCATACTCAAGGAATTCTGTATAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CNNVHYFCYCSL*GFHTQGILYKS Trigger: ACTTTTATACAGAATTCCTTGAGTATGGAAACCCCAGAGAGAGCAATAGCAGAAATAATGGACATTGTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 72 bp | TTCAACCTGATTAACAATGTAAACATTCTCAGTTCCTaGGAACCAATGTTTGGTGGGAAGGTTTTTGATCAA | + |
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Preference number: 6 (lower is better) Translates to: FNLINNVNILSS*EPMFGGKVFDQ Trigger: TTGATCAAAAACCTTCCCACCAAACATTGGTTCCAAGGAACTGAGAATGTTTACATTGTTAATCAGGTTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132967.2 ENSMUST00000143764.9 |
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| CDS CAA 72 bp | TTGATGGACTTTATGTATTGGCTCTGTCTTAGTTTGTaGAAAATGTTTAGTTGTGTCTTCTGGAGGAACATC | + |
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Preference number: 6 (lower is better) Translates to: LMDFMYWLCLSL*KMFSCVFWRNI Trigger: GATGTTCCTCCAGAAGACACAACTAAACATTTTCAACAAACTAAGACAGAGCCAATACATAAAGTCCATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS CAA 72 bp | AAGTCTCATAGCTGTGTCATAAAGTTCCCCTGGCTTTaGCTCATTTGTATCTGTAGTTTTATCAGAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: KSHSCVIKFPWL*LICICSFIRDK Trigger: TTTATCTCTGATAAAACTACAGATACAAATGAGCAAAAGCCAGGGGAACTTTATGACACAGCTATGAGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | AGCCCTACATTGTTTGCAAGGCTTCTATTACTTGGTTaGTTATTTGAGGAGGAAAATGTTTTTGCTAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: SPTLFARLLLLG*LFEEENVFASL Trigger: TAAACTAGCAAAAACATTTTCCTCCTCAAATAATCAACCAAGTAATAGAAGCCTTGCAAACAATGTAGGGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | CTGATTCTGGAGAACCATAGTTTTCTAAAATATTCATaGAGACTGCATCAACAAGATGCTGAACATCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LILENHSFLKYS*RLHQQDAEHRF Trigger: AAAACGATGTTCAGCATCTTGTTGATGCAGTCTTCATGAATATTTTAGAAAACTATGGTTCTCCAGAATCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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| CDS TCA 72 bp | TTCATTAATCAGTTTTACGACTGTGTTACTCAATTCTaGTTGATAAGTGTCAGAATGTCCTACACTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: FINQFYDCVTQF*LISVRMSYTGI Trigger: GATTCCAGTGTAGGACATTCTGACACTTATCAATCAGAATTGAGTAACACAGTCGTAAAACTGATTAATGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143764.9 |
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