Pregenerated sensors for FSIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027344Ensembl transcript IDs: ENSMUST00000028820.7, ENSMUST00000028821.10, ENSMUST00000231133.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AGTTGTGCAGATATGTATATGGGGGAGGGGCAAGCCTaGGCCACAGCTCACATGTGGAGGTCAGAGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: SCADMYMGEGQA*ATAHMWRSEDT Trigger: GGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGCCCCTCCCCCATATACATATCTGCACAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTCAACCGTGTGGAATAAAACTCAGTTaGCTGGGCTTATCAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCGGQRTPEGAGSSRQPCGIKLS*LGLSAS Trigger: GCTTGCTGATAAGCCCAGCAAACTGAGTTTTATTCC...ACACGGTTGACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR TCA 90 bp | GCAAGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGTTCCACACCACTGTTTaGTGTGTGGCCCTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLSHSSHVEVRGHLRELFHTTV*CVALLA Trigger: GGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAA...CAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR TCA 90 bp | TGTATATGGGGGAGGGGCAAGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGGTCCGGGTCTTCATCTaGGCTCTCCTTGGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CIWGRGKPEPQLTCGGQRVRVFI*ALLGWF Trigger: AAACCAGCCAAGGAGAGCTCAGATGAAGACCCGGAC...CCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGCCCCTCCCCCATATACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGGAGGGGCAAGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACAGACAGACCCTGGTTCTaGTGTGAGCACCTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWGRGKPEPQLTCGGQRTDRPWF*CEHLQR Trigger: TCTCTGGAGGTGCTCACACCAGAACCAGGGTCTGTC...TGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGCCCCTCCCCCATAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR TCA 90 bp | CCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTATTATCAGGGAGGGTTaGCCAGCTGCTTTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PEPQLTCGGQRTPEGAGSIIREG*PAAFPA Trigger: TGCAGGGAAAGCAGCTGGTCAACCCTCCCTGATAAT...AGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCATCTGAGCTCTCCTTaGCTGGTTTTGTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSHSSHVEVRGHLRELVHLSSP*LVLSWS Trigger: ACTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATG...AACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CCA 90 bp | ACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTCAACCGTGTGATGTGTGGCCCTCTTaGCCAGAATTCAACTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCGGQRTPEGAGSSRQPCDVWPS*PEFNLF Trigger: AAACAAGTTGAATTCTGGCCAAGAGGGCCACACATC...ACACGGTTGACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGGAGGGGCAAGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACATCGTCTCTTCTAATTTaGGATCATCTGAATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWGRGKPEPQLTCGGQRTSSLLI*DHLNAQ Trigger: CTGAGCATTCAGATGATCCCAAATTAGAAGAGACGA...TGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGCCCCTCCCCCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTTTTCCCTGCAGATTCTaGAGTCAAGCACAAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHSSHVEVRGHLRELVLFPCRF*SQAQKL Trigger: AAGTTTTTGTGCTTGACTTCAGAATCTGCAGGGAAA...AAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGGTATAGCCTTCTCCTaGAACCAGCCAACCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: APFNRLTCVHIADQHTVSGIAFS*NQPTAL Trigger: CAGTGCGGTTGGCTGGTTCCAGGAGAAGGCTATACC...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGAGTCCGGGTCTTCATCTaGGCTCTCCTTGGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNRLTCVHIADQHTVSVRVRVFI*ALLGWF Trigger: AAACCAGCCAAGGAGAGCTCAGATGAAGACCCGGAC...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCTGGGCTTATCAGCAAGCACCTTTACCCACTGAGCCATCACTCTGCCTTACGAATAGCATTTTaGAGTACAGCATTCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFAGLISKHLYPLSHHSALRIAF*STAFVS Trigger: AGAGACGAATGCTGTACTTCAAAATGCTATTCGTAA...GGCAGAGTGATGGCTCAGTGGGTAAAGGTGCTTGCTGATAAGCCCAGCAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR TCA 90 bp | TGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGTTCCACACCACTGTTTaGTGTGTGGCCCTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTHSRSAHCVSEIYNKYLFHTTV*CVALLA Trigger: GGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAA...CAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR GCA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAAAACTCACAATGCAATaGCTCTGCAGCTGCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: APFNRLTCVHIADQHTVSKLTMQ*LCSCFP Trigger: GGGAAAGCAGCTGCAGAGGCATTGCATTGTGAGTTT...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCGACAGACCCTGGTTCTaGTGTGAGCACCTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQIDRPWF*CEHLQR Trigger: TCTCTGGAGGTGCTCACACCAGAACCAGGGTCTGTC...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | GTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCGCTGCTGAGACTCAGTaGCTGCAAGGGTATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHIADQHTVSVRYTISICAAETQ*LQGYSL Trigger: AAGGCTATACCCTTGCAGCCACTGAGTCTCAGCAGC...GCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | GTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCCTCAACCTGTTCACTaGGCTCTTTCAGCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHIADQHTVSVRYTISICPQPVH*ALSACH Trigger: ATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGG...GCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR GCA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCATCTTCAAACTCACAATaGAATGCCTCTGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APFNRLTCVHIADQHTVSSSNSQ*NASAAA Trigger: AGCAGCTGCAGAGGCATTGCATTGTGAGTTTGAAGA...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR GCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCCTGAGACTCAGTGGCTaGAAGGGTATAGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQILRLSG*KGIAFS Trigger: GGAGAAGGCTATACCCTTGCAGCCACTGAGTCTCAG...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR GCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCGGTCCCTTTGCTCTTTaGGGTCCCGGAGTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQIGPFAL*GPGVSS Trigger: AGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACC...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAACTGGGGGTTATCATTaGACATTCCTCAACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: APFNRLTCVHIADQHTVSTGGYH*TFLNLF Trigger: GAACAGGTTGAGGAATGTCCAATGATAACCCCCAGT...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGAGATGTGTGGCCCTCTTaGCCAGAATTCAACTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNRLTCVHIADQHTVSVRDVWPS*PEFNLF Trigger: AAACAAGTTGAATTCTGGCCAAGAGGGCCACACATC...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCTGCCTAATGAAACCCTaGCTGTCTTCACTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQICLMKP*LSSLLG Trigger: GCCTAGGAGTGAAGACAGCCAGGGTTTCATTAGGCA...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGACTGAGTATGAAACACTaGGAAAAGGGCGTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FNRLTCVHIADQHTVSVRLSMKH*EKGVFK Trigger: TTTGAAGACGCCCTTTTCTCAGTGTTTCATACTCAG...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCTCTGACTTTCAAGGCTaGAGATGGTGGGAGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQISDFQG*RWWESQ Trigger: TTGACTCTCCCACCATCTTCAGCCTTGAAAGTCAGA...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR GCA 90 bp | GTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCACTGGGCTTCTCGAATaGTTGGCCAACTCAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHIADQHTVSVRYTISICTGLLE*LANSMF Trigger: AAACATTGAGTTGGCCAAGCATTCGAGAAGCCCAGT...GCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCATCGTCTCTTCTAATTTaGGATCATCTGAATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: APFNRLTCVHIADQHTVSSSLLI*DHLNAQ Trigger: CTGAGCATTCAGATGATCCCAAATTAGAAGAGACGA...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATTTCCCTGCAGATTCTaGAGTCAAGCACAAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FNRLTCVHIADQHTVSVRFPCRF*SQAQKL Trigger: AAGTTTTTGTGCTTGACTTCAGAATCTGCAGGGAAA...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | TGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCGCTTAATAAAATCCTaGCTGTGTTCAGCGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTHSRSAHCVSEIYNKYLRLIKS*LCSAFC Trigger: GCAGAACGCTGAACACAGCCAGGATTTTATTAAGCG...CAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CCA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCCTTCTCTCCGGGAGTTaGTTCCGTATTTCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IADQHTVSVRYTISICQILLSGS*FRISFF Trigger: GAAGAAAGAAATACGGAACCAACTCCCGGAGAGAAG...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR TCA 90 bp | TGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGTCAACAGAGAGTTCCTaGAGCTTTATGTCAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTHSRSAHCVSEIYNKYLSTESS*SFMSIS Trigger: TGAGATTGACATAAAGCTTCAGGAACTCTCTGTTGA...CAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CCA 90 bp | AGCAAGCTGCTGAGACTCAGTGGCTGCAAGGGTATAGCCTTCTCCTaGAACCAGCCAACCGCACTGATCGCCCTCGGCACTGGAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLLRLSGCKGIAFS*NQPTALIALGTGES Trigger: GGACTCTCCAGTGCCGAGGGCGATCAGTGCGGTTGGCTGGTTCCAGGAGAAGGCTATACCCTTGCAGCCACTGAGTCTCAGCAGCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS GCA 90 bp | TTCAGCTTGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTTaGTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGGAGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSLPSMALSRDSRSL*SLRSRSIFSPGVGS Trigger: GGAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCAAGCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | TATGGGGGAGGGGCAAGCCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACTCTCCTTGGCTGGTTTaGTCTTGGAGTCGTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YGGGASLSHSSHVEVRGHSPWLV*SWSRLP Trigger: GGGCAGACGACTCCAAGACAAAACCAGCCAAGGAGA...GTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGGCTTGCCCCTCCCCCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS GCA 90 bp | TGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTTGCTCTTTaGGGTCCCGGAGTATCTTCTCTCCGGGAGTTGGTTCCGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHRWLSAETPGPFAL*GPGVSSLRELVPYF Trigger: GAAATACGGAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS GCA 90 bp | TCGCCCTCGGCACTGGAGAGTCCTGAGTCTGCATCATCCAGGCCTTaGAGGAGCTCATCCAGTCTTTTCTTCTCTCCTTCAACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SPSALESPESASSRP*RSSSSLFFSPSTMT Trigger: GGTCATGGTTGAAGGAGAGAAGAAAAGACTGGATGAGCTCCTGCAAGGCCTGGATGATGCAGACTCAGGACTCTCCAGTGCCGAGGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 90 bp | CACTCTCAAGCCTGTTTGCATCGTCTAGCTGGGTTTCCTGGACCTTaGCTCCGGCCTCTTCTGGTAAGTCACAGAGGGTGGATGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSQACLHRLAGFPGP*LRPLLVSHRGWMGK Trigger: TTTGCCCATCCACCCTCTGTGACTTACCAGAAGAGGCCGGAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CCA 90 bp | CATCCCTCACTCTCAAGCCTGTTTGCATCGTCTAGCTGGGTTTCCTaGACCTTGGCTCCGGCCTCTTCTGGTAAGTCACAGAGGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPSLSSLFASSSWVS*TLAPASSGKSQRVD Trigger: ATCCACCCTCTGTGACTTACCAGAAGAGGCCGGAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTGAGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CCA 90 bp | GGATATGCACATCCCTCACTCTCAAGCCTGTTTGCATCGTCTAGCTaGGTTTCCTGGACCTTGGCTCCGGCCTCTTCTGGTAAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GYAHPSLSSLFASSS*VSWTLAPASSGKSQ Trigger: CTGTGACTTACCAGAAGAGGCCGGAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTGAGGGATGTGCATATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTCAACCGTGTTCATCTGAGCTCTCCTaGGCTGGTTTTGTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TCGGQRTPEGAGSSRQPCSSELS*AGFVLE Trigger: CTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATGA...ACACGGTTGACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS TCA 90 bp | TCCGTTTACTGGGGGTTATCATTGGACATTCCTCAACCTGTTCACTaGGCTCTTTCAGCTTGCCATCGATGGCTCTCAGCCGAGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVYWGLSLDIPQPVH*ALSACHRWLSAETP Trigger: GGGAGTCTCGGCTGAGAGCCATCGATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCCAATGATAACCCCCAGTAAACGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CCA 90 bp | GTTCCTGAAGCTTTATGTCAATCTCAGCAAGCTGCTGAGACTCAGTaGCTGCAAGGGTATAGCCTTCTCCTGGAACCAGCCAACCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VPEALCQSQQAAETQ*LQGYSLLLEPANRT Trigger: AGTGCGGTTGGCTGGTTCCAGGAGAAGGCTATACCCTTGCAGCCACTGAGTCTCAGCAGCTTGCTGAGATTGACATAAAGCTTCAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTGACGTGATCTTGAACTaGAGGCTGGTTTTGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: PQLTCGGQRTPEGAGSSRDVILN*RLVLKF Trigger: GAATTTCAAAACCAGCCTCAAGTTCAAGATCACGTC...ACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CAA 90 bp | ACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTCAACCGTGTTTTACCATGTCAATCTaGACAGACCCTGGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCGGQRTPEGAGSSRQPCFTMSI*TDPGSG Trigger: ACCAGAACCAGGGTCTGTCAAGATTGACATGGTAAA...ACACGGTTGACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS TCA 90 bp | GGCCTTGCAGGAGCTCATCCAGTCTTTTCTTCTCTCCTTCAACCATaGCCACTGGGCTTCTCGAATGCTTGGCCAACTCAATGTTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGAHPVFSSLLQP*PLGFSNAWPTQCFA Trigger: AGCGAAACATTGAGTTGGCCAAGCATTCGAGAAGCCCAGTGGTCATGGTTGAAGGAGAGAAGAAAAGACTGGATGAGCTCCTGCAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTCTTACGAATAGCATTTaGAAGTACAGCATTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PEPQLTCGGQRTPEGAGSLTNSI*KYSIRL Trigger: GAGACGAATGCTGTACTTCAAAATGCTATTCGTAAG...AGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTCCCGTAGCACAAAAACTTTTTaGTGTTTCCCAACTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PQLTCGGQRTPEGAGSSRSTKTF*CFPTPR Trigger: ACGAGGAGTTGGGAAACACAAAAAAGTTTTTGTGCT...ACGGGAAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCACAGCTCACATGTGGAGGTCAGAGGACACCTGAGGGAGCTGGTTCTTTCTCTACATTGTTTTTaGGCCAATAGCTTGTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHSSHVEVRGHLRELVLSLHCF*ANSLSS Trigger: ACTCGACAAGCTATTGGCCAAAAAACAATGTAGAGA...AAGAACCAGCTCCCTCAGGTGTCCTCTGACCTCCACATGTGAGCTGTGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CAA 90 bp | AGGAATAAAACTCAGTTTGCTGGGCTTATCAGCAAGCACCTTTACCCACTGAGCCATTATCAGGGAGGGTaGACCAGCTGCTTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RNKTQFAGLISKHLYPLSHYQGG*TSCFPC Trigger: GCAGGGAAAGCAGCTGGTCAACCCTCCCTGATAATG...GCTCAGTGGGTAAAGGTGCTTGCTGATAAGCCCAGCAAACTGAGTTTTATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS CCA 90 bp | CCATCTCCACGTAATCCGCTCATTCCGTTTACTGGGGGTTATCATTaGACATTCCTCAACCTGTTCACTGAGCTCTTTCAGCTTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRNPLIPFTGGYH*TFLNLFTELFQLAI Trigger: GATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCCAATGATAACCCCCAGTAAACGGAATGAGCGGATTACGTGGAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | TTATTTATTCAGTTGTGCAGATATGTATATGGGGGAGGGGCAAGCCTGAGCCACTCCCAGGACGTGATCTaGAACTTGAGGCTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFIQLCRYVYGGGASLSHSQDVI*NLRLVL Trigger: CAAAACCAGCCTCAAGTTCAAGATCACGTCCTGGGA...GTGGCTCAGGCTTGCCCCTCCCCCATATACATATCTGCACAACTGAATAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS-3UTR CAA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATCTCCTTGGCTGGTTTaGTCTTGGAGTCGTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FNRLTCVHIADQHTVSVRSPWLV*SWSRLP Trigger: GGGCAGACGACTCCAAGACAAAACCAGCCAAGGAGA...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS TCA 90 bp | TGGCATCACATTCCATATCACCCTTATGGCTCTGACTTTCAAGGCTaGAGATGGTGGGAGAGTCAACAGAGAGTTCCTGAAGCTTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: WHHIPYHPYGSDFQG*RWWESQQRVPEALC Trigger: ACATAAAGCTTCAGGAACTCTCTGTTGACTCTCCCACCATCTTCAGCCTTGAAAGTCAGAGCCATAAGGGTGATATGGAATGTGATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS GCA 90 bp | AACTCAATGTTTCGCTTAATAAAATCCTGGCTGTGTTCAGCGTTCTaGCTAATGAAACCCTGGCTGTCTTCACTCCTAGGCTCAATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSMFRLIKSWLCSAF*LMKPWLSSLLGSIA Trigger: AGCGATTGAGCCTAGGAGTGAAGACAGCCAGGGTTTCATTAGGCAGAACGCTGAACACAGCCAGGATTTTATTAAGCGAAACATTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 90 bp | CTTCTCGAATGCTTGGCCAACTCAATGTTTCGCTTAATAAAATCCTaGCTGTGTTCAGCGTTCTGCCTAATGAAACCCTGGCTGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLECLANSMFRLIKS*LCSAFCLMKPWLSS Trigger: TGAAGACAGCCAGGGTTTCATTAGGCAGAACGCTGAACACAGCCAGGATTTTATTAAGCGAAACATTGAGTTGGCCAAGCATTCGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGTTGTGCAGATATGTATATGGGGGAGGGGCAAGCCTGAGCCACAGCTTCGTCTCTTCTAATTaGGGATCATCTGAATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FIQLCRYVYGGGASLSHSFVSSN*GSSECS Trigger: TGAGCATTCAGATGATCCCAAATTAGAAGAGACGAA...GCTGTGGCTCAGGCTTGCCCCTCCCCCATATACATATCTGCACAACTGAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028820.7 |
||
| CDS TCA 90 bp | CCACTTAGCATCATTACTATTCCTTCTTTCTTCCACACCACTGTTTaGTGTGTGGCCCTCTTGGCCAGAATTCAACTTGTTTACCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLSIITIPSFFHTTV*CVALLARIQLVYHV Trigger: GACATGGTAAACAAGTTGAATTCTGGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAAGAAAGAAGGAATAGTAATGATGCTAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 90 bp | CATGAGATTTTCGTAAGTTTCTGGAGGAATCTGAGTATGAAACACTaGGAAAAGGGCGTCTTCAAACTCACAATGCAATGCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HEIFVSFWRNLSMKH*EKGVFKLTMQCLCS Trigger: GCTGCAGAGGCATTGCATTGTGAGTTTGAAGACGCCCTTTTCTCAGTGTTTCATACTCAGATTCCTCCAGAAACTTACGAAAATCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS-3UTR CAA 90 bp | TGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGTCCCAGGACGTGATCTaGAACTTGAGGCTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTHSRSAHCVSEIYNKYLSQDVI*NLRLVL Trigger: CAAAACCAGCCTCAAGTTCAAGATCACGTCCTGGGA...CAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCTCATCTGAGCTCTCCTaGGCTGGTTTTGTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IADQHTVSVRYTISICQISSELS*AGFVLE Trigger: CTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATGA...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | GCTCCATTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCATTCGTCTCTTCTAATTaGGGATCATCTGAATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: APFNRLTCVHIADQHTVSFVSSN*GSSECS Trigger: TGAGCATTCAGATGATCCCAAATTAGAAGAGACGAA...TGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAATGGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | GTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCGACGTGATCTTGAACTaGAGGCTGGTTTTGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VHIADQHTVSVRYTISICDVILN*RLVLKF Trigger: GAATTTCAAAACCAGCCTCAAGTTCAAGATCACGTC...GCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | TTTAATCGTCTTACTTGTGTACACATAGCAGATCAGCACACTGTGTCAGTGAGACTTACGAATAGCATTTaGAAGTACAGCATTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FNRLTCVHIADQHTVSVRLTNSI*KYSIRL Trigger: GAGACGAATGCTGTACTTCAAAATGCTATTCGTAAG...TCTCACTGACACAGTGTGCTGATCTGCTATGTGTACACAAGTAAGACGATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCTCTCTACATTGTTTTTaGGCCAATAGCTTGTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IADQHTVSVRYTISICQISLHCF*ANSLSS Trigger: ACTCGACAAGCTATTGGCCAAAAAACAATGTAGAGA...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCCAAATCAGCACAAAAACTTTTTaGTGTTTCCCAACTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: IADQHTVSVRYTISICQISTKTF*CFPTPR Trigger: ACGAGGAGTTGGGAAACACAAAAAAGTTTTTGTGCT...GATTTGGCAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS-3UTR CAA 90 bp | TGTACACATAGCAGATCAGCACACTGTGTCAGTGAGATATACAATAAGTATTTGCAATCGCTTCTGTATTaGAAAATGGTTGCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTHSRSAHCVSEIYNKYLQSLLY*KMVAFL Trigger: CAGAAAAGCAACCATTTTCAAATACAGAAGCGATTG...CAAATACTTATTGTATATCTCACTGACACAGTGTGCTGATCTGCTATGTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CAA 72 bp | GCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTaGCTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AIDGSQPRLPVP*LFAVPEYLLSG Trigger: CCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS GCA 72 bp | CCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTTaGTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSMALSRDSRSL*SLRSRSIFSPG Trigger: TCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | CTGAGACTCAGTGGCTGCAAGGGTATAGCCTTCTCCTaGAACCAGCCAACCGCACTGATCGCCCTCGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LRLSGCKGIAFS*NQPTALIALGT Trigger: AGTGCCGAGGGCGATCAGTGCGGTTGGCTGGTTCCAGGAGAAGGCTATACCCTTGCAGCCACTGAGTCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | ATGGCTCTCAGCCGAGACTCCCGGTCCCTTTGCTCTTaGCGGTCCCGGAGTATCTTCTCTCCGGGAGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MALSRDSRSLCS*RSRSIFSPGVG Trigger: ACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | TTTCAGCTTGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTaGCTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGGAGTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FQLAIDGSQPRLPVP*LFAVPEYLLSGSWF Trigger: GAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCAAGCTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | TTGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTTGCTCTTaGCGGTCCCGGAGTATCTTCTCTCCGGGAGTTGGTTCCGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: LPSMALSRDSRSLCS*RSRSIFSPGVGSVF Trigger: AAATACGGAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 72 bp | GGTCGCCTGAGGTTGAGGCATGTCCGGGTCTTCATCTaGGCTCTCCTTGGCTGGTTTTGTCTTGGAGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRLRLRHVRVFI*ALLGWFCLGVV Trigger: GACGACTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATGAAGACCCGGACATGCCTCAACCTCAGGCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | GGACATTCCTCAACCTGTTCACTGAGCTCTTTCAGCTaGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GHSSTCSLSSFS*PSMALSRDSRS Trigger: GGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CAA 90 bp | TCACTCTCAAGCCTGTTTGCATCGTCTAGCTGGGTTTCCTGGACCTaGGCTCCGGCCTCTTCTGGTAAGTCACAGAGGGTGGATGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSSLFASSSWVSWT*APASSGKSQRVDGQ Trigger: TTGCCCATCCACCCTCTGTGACTTACCAGAAGAGGCCGGAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | GATAGGAGTCTGCGGGATATGCACATCCCTCACTCTCAAGCCTGTTaGCATCGTCTAGCTGGGTTTCCTGGACCTTGGCTCCGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRSLRDMHIPHSQAC*HRLAGFPGPWLRPL Trigger: AAGAGGCCGGAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTGAGGGATGTGCATATCCCGCAGACTCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | CTGCGGGATATGCACATCCCTCACTCTCAAGCCTGTTaGCATCGTCTAGCTGGGTTTCCTGGACCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRDMHIPHSQAC*HRLAGFPGPWL Trigger: GAGCCAAGGTCCAGGAAACCCAGCTAGACGATGCAAACAGGCTTGAGAGTGAGGGATGTGCATATCCCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | GCTTTATGTCAATCTCAGCAAGCTGCTGAGACTCAGTaGCTGCAAGGGTATAGCCTTCTCCTGGAACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALCQSQQAAETQ*LQGYSLLLEPA Trigger: GGCTGGTTCCAGGAGAAGGCTATACCCTTGCAGCCACTGAGTCTCAGCAGCTTGCTGAGATTGACATAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | GTTATCATTGGACATTCCTCAACCTGTTCACTGAGCTCTTTCAGCTaGCCATCGATGGCTCTCAGCCGAGACTCCCGGTCCCTTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VIIGHSSTCSLSSFS*PSMALSRDSRSLCS Trigger: AGAGCAAAGGGACCGGGAGTCTCGGCTGAGAGCCATCGATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCCAATGATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS TCA 72 bp | TGGGGGTTATCATTGGACATTCCTCAACCTGTTCACTaGGCTCTTTCAGCTTGCCATCGATGGCTCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WGLSLDIPQPVH*ALSACHRWLSA Trigger: GGCTGAGAGCCATCGATGGCAAGCTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCCAATGATAACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CCA 72 bp | TCCTGGCTGTGTTCAGCGTTCTGCCTAATGAAACCCTaGCTGTCTTCACTCCTAGGCTCAATCGCTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SWLCSAFCLMKP*LSSLLGSIASV Trigger: TACAGAAGCGATTGAGCCTAGGAGTGAAGACAGCCAGGGTTTCATTAGGCAGAACGCTGAACACAGCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | GCACCTCCAGAGAACCATTTGAACTTCGGCTCCCAGGACGTGATCTaGAACTTGAGGCTGGTTTTGAAATTCCGTCTAGGTTCCCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: APPENHLNFGSQDVI*NLRLVLKFRLGSPL Trigger: TAAAGGGGAACCTAGACGGAATTTCAAAACCAGCCTCAAGTTCAAGATCACGTCCTGGGAGCCGAAGTTCAAATGGTTCTCTGGAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | GTGTGGCCCTCTTGGCCAGAATTCAACTTGTTTACCATGTCAATCTaGACAGACCCTGGTTCTGGTGTGAGCACCTCCAGAGAACCATTT | + |
|
Preference number: 6 (lower is better) Translates to: VWPSWPEFNLFTMSI*TDPGSGVSTSREPF Trigger: AAATGGTTCTCTGGAGGTGCTCACACCAGAACCAGGGTCTGTCAAGATTGACATGGTAAACAAGTTGAATTCTGGCCAAGAGGGCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 90 bp | GGCATGTCCGGGTCTTCATCTGAGCTCTCCTTGGCTGGTTTTGTCTaGGAGTCGTCTGCCCACTTAGCATCATTACTATTCCTTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMSGSSSELSLAGFV*ESSAHLASLLFLLS Trigger: AGAAAGAAGGAATAGTAATGATGCTAAGTGGGCAGACGACTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATGAAGACCCGGACATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 72 bp | CTTCACAGCATCCCCAGCCTCCTGATCATCTACTACTaGTTTCTCTGCAAGGCTGGTTTTCAACTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHSIPSLLIIYY*FLCKAGFQLLV Trigger: GACCAAGAGTTGAAAACCAGCCTTGCAGAGAAATCAGTAGTAGATGATCAGGAGGCTGGGGATGCTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | CTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGGAGTTaGTTCCGTATTTCTTTCTTCATTGGCATCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LFAVPEYLLSGS*FRISFFIGITF Trigger: GAATGTGATGCCAATGAAGAAAGAAATACGGAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | CATTTGAACTTCGGCTCCCAGGACGTGATCTTGAACTaGAGGCTGGTTTTGAAATTCCGTCTAGGTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLNFGSQDVILN*RLVLKFRLGSP Trigger: AGGGGAACCTAGACGGAATTTCAAAACCAGCCTCAAGTTCAAGATCACGTCCTGGGAGCCGAAGTTCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | GGGTCTTCATCTGAGCTCTCCTTGGCTGGTTTTGTCTaGGAGTCGTCTGCCCACTTAGCATCATTACTATTC | + |
|
Preference number: 6 (lower is better) Translates to: GSSSELSLAGFV*ESSAHLASLLF Trigger: GAATAGTAATGATGCTAAGTGGGCAGACGACTCCAAGACAAAACCAGCCAAGGAGAGCTCAGATGAAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | GCTCTTTGCGGTCCCGGAGTATCTTCTCTCCGGGAGTaGGTTCCGTATTTCTTTCTTCATTGGCATCACATT | + |
|
Preference number: 6 (lower is better) Translates to: ALCGPGVSSLRE*VPYFFLHWHHI Trigger: AATGTGATGCCAATGAAGAAAGAAATACGGAACCAACTCCCGGAGAGAAGATACTCCGGGACCGCAAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS GCA 72 bp | TTTCGCTTAATAAAATCCTGGCTGTGTTCAGCGTTCTaGCTAATGAAACCCTGGCTGTCTTCACTCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FRLIKSWLCSAF*LMKPWLSSLLG Trigger: GCCTAGGAGTGAAGACAGCCAGGGTTTCATTAGGCAGAACGCTGAACACAGCCAGGATTTTATTAAGCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | CGTAATCCGCTCATTCCGTTTACTGGGGGTTATCATTaGACATTCCTCAACCTGTTCACTGAGCTCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RNPLIPFTGGYH*TFLNLFTELFQ Trigger: CTGAAAGAGCTCAGTGAACAGGTTGAGGAATGTCCAATGATAACCCCCAGTAAACGGAATGAGCGGATTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028821.10 |
||
| CDS CAA 72 bp | GAGAACCATTTGAACTTCGGCTCCCAGGACGTGATCTaGAACTTGAGGCTGGTTTTGAAATTCCGTCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ENHLNFGSQDVI*NLRLVLKFRLG Trigger: ACCTAGACGGAATTTCAAAACCAGCCTCAAGTTCAAGATCACGTCCTGGGAGCCGAAGTTCAAATGGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | TCTTGGCCAGAATTCAACTTGTTTACCATGTCAATCTaGACAGACCCTGGTTCTGGTGTGAGCACCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWPEFNLFTMSI*TDPGSGVSTSR Trigger: TCTGGAGGTGCTCACACCAGAACCAGGGTCTGTCAAGATTGACATGGTAAACAAGTTGAATTCTGGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | TCTCTCCGGGAGTTGGTTCCGTATTTCTTTCTTCATTaGCATCACATTCCATATCACCCTTATGGCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLRELVPYFFLH*HHIPYHPYGSD Trigger: GTCAGAGCCATAAGGGTGATATGGAATGTGATGCCAATGAAGAAAGAAATACGGAACCAACTCCCGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | CCTCCTGATCATCTACTACTGATTTCTCTGCAAGGCTaGTTTTCAACTCTTGGTCATCTGAGGAGGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPDHLLLISLQG*FSTLGHLRRSS Trigger: TGAACTCCTCCTCAGATGACCAAGAGTTGAAAACCAGCCTTGCAGAGAAATCAGTAGTAGATGATCAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231133.2 |
||
| CDS GCA 72 bp | TTCTCTCCTTCAACCATGACCACTGGGCTTCTCGAATaGTTGGCCAACTCAATGTTTCGCTTAATAAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: FSPSTMTTGLLE*LANSMFRLIKS Trigger: GGATTTTATTAAGCGAAACATTGAGTTGGCCAAGCATTCGAGAAGCCCAGTGGTCATGGTTGAAGGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CCA 72 bp | CTTTCTTCCACACCACTGTTTGATGTGTGGCCCTCTTaGCCAGAATTCAACTTGTTTACCATGTCAATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSTPLFDVWPS*PEFNLFTMSIL Trigger: CAAGATTGACATGGTAAACAAGTTGAATTCTGGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS CAA 72 bp | CATCATTACTATTCCTTCTTTCTTCCACACCACTGTTaGATGTGTGGCCCTCTTGGCCAGAATTCAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HHYYSFFLPHHC*MCGPLGQNSTC Trigger: ACAAGTTGAATTCTGGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAAGAAAGAAGGAATAGTAATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 72 bp | ATCATTACTATTCCTTCTTTCTTCCACACCACTGTTTaGTGTGTGGCCCTCTTGGCCAGAATTCAACTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IITIPSFFHTTV*CVALLARIQLV Trigger: AACAAGTTGAATTCTGGCCAAGAGGGCCACACATCAAACAGTGGTGTGGAAGAAAGAAGGAATAGTAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 72 bp | TTCGTAAGTTTCTGGAGGAATCTGAGTATGAAACACTaGGAAAAGGGCGTCTTCAAACTCACAATGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: FVSFWRNLSMKH*EKGVFKLTMQC Trigger: GCATTGCATTGTGAGTTTGAAGACGCCCTTTTCTCAGTGTTTCATACTCAGATTCCTCCAGAAACTTACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028821.10 ENSMUST00000231133.2 |
||
| CDS TCA 72 bp | AGCTTGTCGAGTCTGTGCATCTTACGAATAGCATTTTaGAGTACAGCATTCGTCTCTTCTAATTTGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSSLCILRIAF*STAFVSSNLGS Trigger: TGATCCCAAATTAGAAGAGACGAATGCTGTACTTCAAAATGCTATTCGTAAGATGCACAGACTCGACAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028820.7 ENSMUST00000028821.10 ENSMUST00000231133.2 |
||