Pregenerated sensors for FSHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027120Ensembl transcript IDs: ENSMUST00000028533.7
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGTGGGGGCCAGCTTTCCTCAGCCAGCTTCATCAGCATTTCTCGGATATTTCTCGGATGGAGGGATGAGTaGTGTAGAGTCCTGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CGGQLSSASFISISRIFLGWRDE*CRVLAL Trigger: CAGGGCCAGGACTCTACACCACTCATCCCTCCATCC...GAGAAATATCCGAGAAATGCTGATGAAGCTGGCTGAGGAAAGCTGGCCCCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR CAA 90 bp | TGTCTCAATACTCCACGCTCTTCAGAGGAGTTGAGCAGCCTAACCTaGTGGGGGCCAGCTTTCCTCAGCCAGCTTCATCAGCATTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: CLNTPRSSEELSSLT*WGPAFLSQLHQHFS Trigger: CGAGAAATGCTGATGAAGCTGGCTGAGGAAAGCTGGCCCCCACAAGGTTAGGCTGCTCAACTCCTCTGAAGAGCGTGGAGTATTGAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR CCA 90 bp | CCCACTTCAAAACCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGCCTTCAGGACAAGGGTaGGCGAACGGCAATGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: PTSKPSLTACEGKLVRSGPSGQG*ANGNVH Trigger: ATGGACATTGCCGTTCGCCCACCCTTGTCCTGAAGG...CCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGGTTTTGAAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR CCA 90 bp | GGTTACTACCTCCTGTCCTGTCTGCCTGGAACAATCCATAGATGTTTGATCCTGAGCAGCCTAACCTTGTaGGGGCCAGCTTTCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GYYLLSCLPGTIHRCLILSSLTL*GPAFLS Trigger: GCTGAGGAAAGCTGGCCCCCACAAGGTTAGGCTGCT...CAGGATCAAACATCTATGGATTGTTCCAGGCAGACAGGACAGGAGGTAGTAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAACTCCCTCTAGACTCATaGATGCCTCTGTCTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLTACEGKLVRSGSFEELPLDS*MPLSKR Trigger: CCTTTTAGACAGAGGCATGCATGAGTCTAGAGGGAG...TTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATACCTTGGGAAATTCTaGGCTTGGTTACTACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSLTACEGKLVRSGSFEEYLGKF*AWLLPP Trigger: AGGAGGTAGTAACCAAGCTCAGAATTTCCCAAGGTA...TTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATTAAGTTTGCAATCATaGCAGAGTCTCCAAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PSLTACEGKLVRSGSFEELSLQS*QSLQSL Trigger: CAGACTTTGGAGACTCTGGCATGATTGCAAACTTAA...TTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR CCA 72 bp | CCACGCTCTTCAGAGGAGTTGAGCAGCCTAACCTTGTaGGGGCCAGCTTTCCTCAGCCAGCTTCATCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: PRSSEELSSLTL*GPAFLSQLHQH Trigger: ATGCTGATGAAGCTGGCTGAGGAAAGCTGGCCCCCACAAGGTTAGGCTGCTCAACTCCTCTGAAGAGCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR GCA 72 bp | ACAACAGTGGGTCTGATGGTCCCCAAGCCAGTGGTTTaGAGTCCCAGCACTAAGAAGTCACAGACTTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: TTVGLMVPKPVV*SPSTKKSQTFW Trigger: CCAAAAAGTCTGTGACTTCTTAGTGCTGGGACTGCAAACCACTGGCTTGGGGACCATCAGACCCACTGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR CAA 90 bp | CCCACTTCAAAACCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGACAATCCATAGATGTTaGATCCTGTCTCAATACTCC | + |
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Preference number: 3 (lower is better) Translates to: PTSKPSLTACEGKLVRSGTIHRC*ILSQYS Trigger: GGAGTATTGAGACAGGATCAAACATCTATGGATTGT...CCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGGTTTTGAAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAAGAAGTCACAGACTTTTaGGATATCATGGTCCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PSLTACEGKLVRSGSFEEEVTDF*DIMVLQ Trigger: CTGAAGGACCATGATATCCAAAAAGTCTGTGACTTC...TTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR TCA 72 bp | CAAAACCTTCTCTCACTGCATGTGAGGGAAAGCTGGTaGGATCAGGGAGTTTTGAAGAATTCTAGCAGCATT | + |
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Preference number: 3 (lower is better) Translates to: QNLLSLHVRESW*DQGVLKNSSSI Trigger: AATGCTGCTAGAATTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATTCTTCTTAAGGAAGCCATaGAGTTTCTCATTGAATTCC | + |
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Preference number: 3 (lower is better) Translates to: SLTACEGKLVRSGSFEEFFLRKP*SFSLNS Trigger: GGAATTCAATGAGAAACTCAATGGCTTCCTTAAGAA...GAATTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR TCA 90 bp | GTGGTTTGCAGTCCCAGCACTAAGAAGTCACAGACTTTTTGGATATCATGGTCCTGTGTAGAGGGAGTCTaGGTGGCGGGCACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVCSPSTKKSQTFWISWSCVEGV*VAGTAR Trigger: CCTGGCTGTGCCCGCCACTCAGACTCCCTCTACACA...GGACCATGATATCCAAAAAGTCTGTGACTTCTTAGTGCTGGGACTGCAAACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR GCA 90 bp | GGTTACTACCTCCTGTCCTGTCTGCCTGGAACAATCCATAGATGTTTGATCCTGCTAGGCCCCTCACGGTaGAGTCAGTGCTGTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GYYLLSCLPGTIHRCLILLGPSR*SQCCRC Trigger: ACAGCGACAGCACTGACTGCACCGTGAGGGGCCTAG...CAGGATCAAACATCTATGGATTGTTCCAGGCAGACAGGACAGGAGGTAGTAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR TCA 90 bp | TGTAGAGTCCTGGCCCTGGCACTCCTAGTCCTGAGTTCCTTCTCCCTATCTGTCCACACCAAGTGGTATTaGTGCTTATGCAGAAACGGC | + |
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Preference number: 4 (lower is better) Translates to: CRVLALALLVLSSFSLSVHTKWY*CLCRNG Trigger: GCCGTTTCTGCATAAGCATCAATACCACTTGGTGTG...GACAGATAGGGAGAAGGAACTCAGGACTAGGAGTGCCAGGGCCAGGACTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CCA 90 bp | TGTGGGGGCCAGCTTTCCTCAGCCAGCTTCATCAGCATTTCTCGGATATTTCTCGGTATTGGGCCGAGCTaGGTCCTTATACACCAGATC | + |
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Preference number: 4 (lower is better) Translates to: CGGQLSSASFISISRIFLGIGPS*VLIHQI Trigger: GATCTGGTGTATAAGGACCCAGCTCGGCCCAATACC...GAGAAATATCCGAGAAATGCTGATGAAGCTGGCTGAGGAAAGCTGGCCCCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR GCA 90 bp | GCAATCATGCCAGAGTCTCCAAAGTCTGATGGCTCTAAAAGGCAGACGATTGTGTCACGGTGCAGTCAGTaGTGTCGCTGTCACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: AIMPESPKSDGSKRQTIVSRCSQ*CRCHTC Trigger: GCAAGTGTGACAGCGACAGCACTGACTGCACCGTGA...CACAATCGTCTGCCTTTTAGAGCCATCAGACTTTGGAGACTCTGGCATGATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR CAA 72 bp | CTCCTGTCCTGTCTGCCTGGAACAATCCATAGATGTTaGATCCTGTCTCAATACTCCACGCTCTTCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLSCLPGTIHRC*ILSQYSTLFRG Trigger: TCCTCTGAAGAGCGTGGAGTATTGAGACAGGATCAAACATCTATGGATTGTTCCAGGCAGACAGGACAGGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR TCA 90 bp | CTTAAGTTTGCAATCATGCCAGAGTCTCCAAAGTCTGATGGCTCTAAAAGGCAGTCACACTTGCCACAGTaGCATTCAGTGGCTACTGGA | + |
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Preference number: 4 (lower is better) Translates to: LKFAIMPESPKSDGSKRQSHLPQ*HSVATG Trigger: TCCAGTAGCCACTGAATGTCACTGTGGCAAGTGTGA...CTGCCTTTTAGAGCCATCAGACTTTGGAGACTCTGGCATGATTGCAAACTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATTCGTCAATTCACAGCTATaGCAGCAGATTGCTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLTACEGKLVRSGSFEEFVNSQL*QQIALQ Trigger: CTGGAGAGCAATCTGCTGCCATAGCTGTGAATTGAC...GAATTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATTCATACTTTCTGGGTATTaGGCCGAGCTGGGTCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SLTACEGKLVRSGSFEEFILSGY*AELGPY Trigger: ATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTAT...GAATTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| 3UTR CAA 72 bp | AAGAACTTGGTGGCAATACCTTGGGAAATTCTGAGCTaGGTTACTACCTCCTGTCCTGTCTGCCTGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: KNLVAIPWEILS*VTTSCPVCLEQ Trigger: TTGTTCCAGGCAGACAGGACAGGAGGTAGTAACCAAGCTCAGAATTTCCCAAGGTATTGCCACCAAGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR GCA 90 bp | TCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATTCAGCACCAGAATAAGATaGAAAGCTGGATCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLTACEGKLVRSGSFEEFSTRIR*KAGSTS Trigger: TGAAGTTGATCCAGCTTTGCATCTTATTCTGGTGCT...GAATTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CCA 90 bp | CTTAAGTTTGCAATCATGCCAGAGTCTCCAAAGTCTGATGGCTCTAAAAGGCAGCACAGTGACATTCAGTaGCTACTGGATATGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LKFAIMPESPKSDGSKRQHSDIQ*LLDMCR Trigger: TCTACACATATCCAGTAGCCACTGAATGTCACTGTG...CTGCCTTTTAGAGCCATCAGACTTTGGAGACTCTGGCATGATTGCAAACTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 90 bp | TGCAGTCAGTGCTGTCGCTGTCACACTTGCCACAGTGACATTCAGTaGCTACTGGATATGTGTAGAGGGAGTCTGAGTGGCGGGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: CSQCCRCHTCHSDIQ*LLDMCRGSLSGGHS Trigger: GCTGTGCCCGCCACTCAGACTCCCTCTACACATATCCAGTAGCCACTGAATGTCACTGTGGCAAGTGTGACAGCGACAGCACTGACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS TCA 90 bp | GGCGGGCACAGCCAGGCAATCTTACGGTCTCGTATACCAGCTCCTTaGAGGTACATACTTTCTGGGTATTGGGCCGAGCTGGGTCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: GGHSQAILRSRIPAP*RYILSGYWAELGPY Trigger: ATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGACCGTAAGATTGCCTGGCTGTGCCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 90 bp | TACCAGCTCCTTGAAGGTACATACTTTCTGGGTATTGGGCCGAGCTaGGTCCTTATACACCAGATCCCTAGTGTAGCAGTAGCCCGCACA | + |
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Preference number: 5 (lower is better) Translates to: YQLLEGTYFLGIGPS*VLIHQIPSVAVART Trigger: TGTGCGGGCTACTGCTACACTAGGGATCTGGTGTATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 90 bp | AATCTTACGGTCTCGTATACCAGCTCCTTGAAGGTACATACTTTCTaGGTATTGGGCCGAGCTGGGTCCTTATACACCAGATCCCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: NLTVSYTSSLKVHTF*VLGRAGSLYTRSLV Trigger: CACTAGGGATCTGGTGTATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGACCGTAAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 90 bp | TCTTCCTTCTCTACTGAGATGGTGATGTTGGTCAATTCACAGCTATaGCAGCAGATTGCTCTCCAGCACCAGAATAAGATGCAAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSFSTEMVMLVNSQL*QQIALQHQNKMQSW Trigger: CCAGCTTTGCATCTTATTCTGGTGCTGGAGAGCAATCTGCTGCCATAGCTGTGAATTGACCAACATCACCATCTCAGTAGAGAAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTCACTGCATGTGAGGGAAAGCTGGTGAGATCAGGGAGTTTTGAAGAATCGTATACCAGCTCCTaGAAGGTACATACTTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSLTACEGKLVRSGSFEESYTSS*KVHTFW Trigger: CCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGA...TTCTTCAAAACTCCCTGATCTCACCAGCTTTCCCTCACATGCAGTGAGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CAA 90 bp | CTTAAGTTTGCAATCATGCCAGAGTCTCCAAAGTCTGATGGCTCTAAAAGGCAGGCACACCAAGTGGTATaGATGCTTATGCAGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: LKFAIMPESPKSDGSKRQAHQVV*MLMQKR Trigger: CCGTTTCTGCATAAGCATCAATACCACTTGGTGTGC...CTGCCTTTTAGAGCCATCAGACTTTGGAGACTCTGGCATGATTGCAAACTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS-3UTR CAA 90 bp | CTTAAGTTTGCAATCATGCCAGAGTCTCCAAAGTCTGATGGCTCTAAAAGGCAGACTGAGATGGTGATGTaGGTCAATTCACAGCTATGG | + |
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Preference number: 5 (lower is better) Translates to: LKFAIMPESPKSDGSKRQTEMVM*VNSQLW Trigger: CCATAGCTGTGAATTGACCAACATCACCATCTCAGT...CTGCCTTTTAGAGCCATCAGACTTTGGAGACTCTGGCATGATTGCAAACTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS GCA 72 bp | AGTAGCTGGGTCCTAGGCCCCTCACGGTGCAGTCAGTaGTGTCGCTGTCACACTTGCCACAGTGACATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSWVLGPSRCSQ*CRCHTCHSDIQ Trigger: CTGAATGTCACTGTGGCAAGTGTGACAGCGACAGCACTGACTGCACCGTGAGGGGCCTAGGACCCAGCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CAA 90 bp | TGGCGGGCACAGCCAGGCAATCTTACGGTCTCGTATACCAGCTCCTaGAAGGTACATACTTTCTGGGTATTGGGCCGAGCTGGGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: WRAQPGNLTVSYTSS*KVHTFWVLGRAGSL Trigger: TAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGACCGTAAGATTGCCTGGCTGTGCCCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 72 bp | TGCTGTCGCTGTCACACTTGCCACAGTGACATTCAGTaGCTACTGGATATGTGTAGAGGGAGTCTGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: CCRCHTCHSDIQ*LLDMCRGSLSG Trigger: GCCACTCAGACTCCCTCTACACATATCCAGTAGCCACTGAATGTCACTGTGGCAAGTGTGACAGCGACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS TCA 72 bp | AGCCAGGCAATCTTACGGTCTCGTATACCAGCTCCTTaGAGGTACATACTTTCTGGGTATTGGGCCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQAILRSRIPAP*RYILSGYWAEL Trigger: CAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGACCGTAAGATTGCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CAA 72 bp | CAGCCAGGCAATCTTACGGTCTCGTATACCAGCTCCTaGAAGGTACATACTTTCTGGGTATTGGGCCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: QPGNLTVSYTSS*KVHTFWVLGRA Trigger: AGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGACCGTAAGATTGCCTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 72 bp | GTCTCGTATACCAGCTCCTTGAAGGTACATACTTTCTaGGTATTGGGCCGAGCTGGGTCCTTATACACCAGA | + |
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Preference number: 6 (lower is better) Translates to: VSYTSSLKVHTF*VLGRAGSLYTR Trigger: TCTGGTGTATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATACGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CCA 72 bp | CTTGAAGGTACATACTTTCTGGGTATTGGGCCGAGCTaGGTCCTTATACACCAGATCCCTAGTGTAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LEGTYFLGIGPS*VLIHQIPSVAV Trigger: TACTGCTACACTAGGGATCTGGTGTATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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| CDS CAA 72 bp | TATACCAGCTCCTTGAAGGTACATACTTTCTGGGTATaGGGCCGAGCTGGGTCCTTATACACCAGATCCCTA | + |
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Preference number: 6 (lower is better) Translates to: YTSSLKVHTFWV*GRAGSLYTRSL Trigger: TAGGGATCTGGTGTATAAGGACCCAGCTCGGCCCAATACCCAGAAAGTATGTACCTTCAAGGAGCTGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028533.7 |
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