Pregenerated sensors for FSD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038663Ensembl transcript IDs: ENSMUST00000042318.6
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTaGTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LKPERTTWLKLPSSA*WGWNLTPSLSYSLH Trigger: GTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 90 bp | TGTGAGCCTACGGGAACCATTCTTACTCAGTGTCCACGATGGCCTTaGGATGGGCACCTGACTTCCTTCTTTTTCTGTAATTTCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: CEPTGTILTQCPRWP*DGHLTSFFFCNFLP Trigger: AGGCAAGAAATTACAGAAAAAGAAGGAAGTCAGGTGCCCATCTCAAGGCCATCGTGGACACTGAGTAAGAATGGTTCCCGTAGGCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 90 bp | GAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTTaGTGGCTTCCTTTACTGCTCAAGCTTTCCTTTGATTCCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ELDPLSQLQSALASC*WLPLLLKLSFDSFH Trigger: GTGAAAGGAATCAAAGGAAAGCTTGAGCAGTAAAGGAAGCCATCAACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CCA 90 bp | ACCTCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATaGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAACTTGACC | + |
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Preference number: 1 (lower is better) Translates to: TSCLIFLTLKPERTT*LKLPSSACWGWNLT Trigger: GGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 90 bp | CCTTTATTCCAGTTAGCACCTGGCTTTTCTTTAACCTTGTCCCCTTaGGCCCAGTACTTGGCTCTAACAAATCATTTCCTGGTCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: PLFQLAPGFSLTLSP*AQYLALTNHFLVFL Trigger: AAGGAAGACCAGGAAATGATTTGTTAGAGCCAAGTACTGGGCTCAAGGGGACAAGGTTAAAGAAAAGCCAGGTGCTAACTGGAATAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAGTAGTGCCACTCCTAGCCCCGCCTCCACCCATGACTAAGCATTCAAATGGCACAGCACACAGGTaGAAAGGGCTCCAGTACACC | + |
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Preference number: 2 (lower is better) Translates to: FQVVPLLAPPPPMTKHSNGTAHR*KGLQYT Trigger: GGTGTACTGGAGCCCTTTTCACCTGTGTGCTGTGCC...ATTTGAATGCTTAGTCATGGGTGGAGGCGGGGCTAGGAGTGGCACTACTTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGACGATGGCCTTGAGATaGGCACCTGACTTCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KPERTTWLKLPSSACWGWTMALR*APDFLL Trigger: AAGAAGGAAGTCAGGTGCCCATCTCAAGGCCATCGT...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CAA 90 bp | TCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTaGCTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SKARKNHMAEAAKFC*LGLELDPLSQLQSA Trigger: TGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | GATCCCCTGAGTCCCACAGTTCAAATCATCTCAGCAGTGTCTTCTGTTCTCCCAATTGTCCTGTTTCTGTaGAGAGACACCATGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: DPLSPTVQIISAVSSVLPIVLFL*RDTMTK Trigger: CTTGGTCATGGTGTCTCTTCACAGAAACAGGACAAT...TGGGAGAACAGAAGACACTGCTGAGATGATTTGAACTGTGGGACTCAGGGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | GGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTATTTCTGTCCACGATGGCCTTaGGATGGGCACCTGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: GISNTMRFPIRYHLYNYFCPRWP*DGHLTS Trigger: GGAAGTCAGGTGCCCATCTCAAGGCCATCGTGGACA...GAAATAATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAAAATATCACAAGAATaGTCCAATGGCCACTTACTA | + |
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Preference number: 2 (lower is better) Translates to: KPERTTWLKLPSSACWGWKISQE*SNGHLL Trigger: TAGTAAGTGGCCATTGGACCATTCTTGTGATATTTT...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CAA 90 bp | TCCTTTATTCCAGTTAGCACCTGGCTTTTCTTTAACCTTGTCCCCTaGAGCCCAGTACTTGGCTCTAACAAATCATTTCCTGGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SFIPVSTWLFFNLVP*SPVLGSNKSFPGLP Trigger: AGGAAGACCAGGAAATGATTTGTTAGAGCCAAGTACTGGGCTCAAGGGGACAAGGTTAAAGAAAAGCCAGGTGCTAACTGGAATAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGGGTGTGGTGTTGCCCTaGGGTCACAATTCCTTTATT | + |
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Preference number: 2 (lower is better) Translates to: SCLIFLTLKPERTTWLKLGVVLP*GHNSFI Trigger: AATAAAGGAATTGTGACCTCAGGGCAACACCACACC...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGCTTGAGATGGGCACCTaGCTTCCTTCTTTTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SCLIFLTLKPERTTWLKLLEMGT*LPSFSV Trigger: TACAGAAAAAGAAGGAAGTCAGGTGCCCATCTCAAG...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTGGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATGATGGCTTCCTTTACTaGTCAAGCTTTCCTTTGATT | + |
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Preference number: 2 (lower is better) Translates to: VSGISNTMRFPIRYHLYNDGFLY*SSFPLI Trigger: AATCAAAGGAAAGCTTGAGCAGTAAAGGAAGCCATC...ATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTGGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATATTCCAGTTAGCACCTaGCTTTTCTTTAACCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VSGISNTMRFPIRYHLYNIPVST*LFFNLV Trigger: GACAAGGTTAAAGAAAAGCCAGGTGCTAACTGGAAT...ATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGGAAGATTCCACAACCTCTTGTCTTATATTCTTAACTCTAAAGCCAGAGCTCAAGCTTTCCTTTaGTTCCTTTCACAGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: CEGRFHNLLSYILNSKARAQAFL*FLSQVG Trigger: TCCAACCTGTGAAAGGAATCAAAGGAAAGCTTGAGC...TCTGGCTTTAGAGTTAAGAATATAAGACAAGAGGTTGTGGAATCTTCCTTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGGAAGATTCCACAACCTCTTGTCTTATATTCTTAACTCTAAAGCCAGAGATCTTGGTAAACAGTaGAATGTCACAAATGTACAG | + |
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Preference number: 2 (lower is better) Translates to: CEGRFHNLLSYILNSKARDLGKQ*NVTNVQ Trigger: CTGTACATTTGTGACATTTCACTGTTTACCAAGATC...TCTGGCTTTAGAGTTAAGAATATAAGACAAGAGGTTGTGGAATCTTCCTTCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTGTGTCCACGATGGCCTaGAGATGGGCACCTGACTTC | + |
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Preference number: 3 (lower is better) Translates to: LGLELDPLSQLQSALASCVSTMA*RWAPDF Trigger: GAAGTCAGGTGCCCATCTCAAGGCCATCGTGGACAC...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR GCA 72 bp | GCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTaGTTGCTGGGGCTGGAACTTGACCCCCTCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ARKNHMAEAAKF*LLGLELDPLSQ Trigger: CTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CCA 72 bp | ACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTaGAACTTGACCCCCTCTCTCAGTTACAGTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: TWLKLPSSACWG*NLTPSLSYSLH Trigger: GTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR GCA 72 bp | GAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTaGTGGGGCTGGAACTTGACCCCCTCTCTCAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: ERTTWLKLPSSA*WGWNLTPSLSY Trigger: GTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CCA 72 bp | AGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTaGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGT | + |
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Preference number: 3 (lower is better) Translates to: RTTWLKLPSSAC*GWNLTPSLSYS Trigger: ACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 72 bp | GCCCCGCCTCCACCCATGACTAAGCATTCAAATATGTaGGCCTACGGGAACCATTCTTACTCAGTGTCCACG | + |
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Preference number: 3 (lower is better) Translates to: APPPPMTKHSNM*AYGNHSYSVST Trigger: CGTGGACACTGAGTAAGAATGGTTCCCGTAGGCTCACATATTTGAATGCTTAGTCATGGGTGGAGGCGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | TATGGCAGGAAGCATGGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAGGTTTCTAGCAGTAGGAACCTaGAATACCAAGTTCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: YGRKHGSTHCMGAVVERFLAVGT*NTKFSQ Trigger: CTGGCTGAACTTGGTATTCAAGGTTCCTACTGCTAG...AAACCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTGCAATACCCCAGTCCTaGTTATCAACCAACTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LGLELDPLSQLQSALASCAIPQS*LSTNLC Trigger: ACACAAGTTGGTTGATAACAAGGACTGGGGTATTGC...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGTGCTCAAGCTTTCCTTaGATTCCTTTCACAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: KPERTTWLKLPSSACWGWCSSFP*IPFTGW Trigger: CCAACCTGTGAAAGGAATCAAAGGAAAGCTTGAGCA...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CCA 72 bp | TTTGAGAGGTTAAGCCCTTTATTATGGCAGGAAGCATaGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: FERLSPLLWQEA*QHSLHGSGSGE Trigger: CTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATAATAAAGGGCTTAACCTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTGGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATGCTGCCAAGTTCTGCTaGCTGGGGCTGGAACTTGAC | + |
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Preference number: 3 (lower is better) Translates to: VSGISNTMRFPIRYHLYNAAKFC*LGLELD Trigger: GTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGC...ATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGCAATACCAGGCTGTCTaGAAATCTCCTTTGTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: KPERTTWLKLPSSACWGWQYQAV*KSPLLK Trigger: TTTTAACAAAGGAGATTTCAAGACAGCCTGGTATTG...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 72 bp | ACGGGAACCATTCTTACTCAGTGTCCACGATGGCCTTaGGATGGGCACCTGACTTCCTTCTTTTTCTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: TGTILTQCPRWP*DGHLTSFFFCN Trigger: ATTACAGAAAAAGAAGGAAGTCAGGTGCCCATCTCAAGGCCATCGTGGACACTGAGTAAGAATGGTTCCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 72 bp | CCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTTaGTGGCTTCCTTTACTGCTCAAGCTTTCCTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: PLSQLQSALASC*WLPLLLKLSFD Trigger: ATCAAAGGAAAGCTTGAGCAGTAAAGGAAGCCATCAACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 72 bp | CAGTTAGCACCTGGCTTTTCTTTAACCTTGTCCCCTTaGGCCCAGTACTTGGCTCTAACAAATCATTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: QLAPGFSLTLSP*AQYLALTNHFL Trigger: CAGGAAATGATTTGTTAGAGCCAAGTACTGGGCTCAAGGGGACAAGGTTAAAGAAAAGCCAGGTGCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGTTTAACCTTGTCCCCTaGAGCCCAGTACTTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SCLIFLTLKPERTTWLKLFNLVP*SPVLGS Trigger: AGAGCCAAGTACTGGGCTCAAGGGGACAAGGTTAAA...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR TCA 72 bp | CAACCAACTTGTGTATTAGTCATTGTCCTGTTTCTGTaGAGAGACACCATGACCAAGATAATGCTTATAAAA | + |
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Preference number: 3 (lower is better) Translates to: QPTCVLVIVLFL*RDTMTKIMLIK Trigger: TTTTATAAGCATTATCTTGGTCATGGTGTCTCTTCACAGAAACAGGACAATGACTAATACACAAGTTGGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CCA 72 bp | AAAGCAGCCATATTCTTTGATAAAATATCACAAGAATaGTCCAATGGCCACTTACTAATATTCATCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: KAAIFFDKISQE*SNGHLLIFIPS Trigger: AGAGGGGATGAATATTAGTAAGTGGCCATTGGACCATTCTTGTGATATTTTATCAAAGAATATGGCTGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR GCA 90 bp | GCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAATGGGGGCTGCCGACCTaGCCAGCCCGGATTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ARKNHMAEAAKFCLLGLEWGLPT*PARIPP Trigger: AGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCA...TTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR GCA 90 bp | ATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAACTTGACCCCCTCTCTATGGCGTCCATCAGCTaGTCCACATCAGAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: MAEAAKFCLLGLELDPLSMASIS*STSEKS Trigger: GGACTTCTCTGATGTGGAGCAGCTGATGGACGCCAT...AGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR TCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGGGTTCTCTCCACAGCTaGCCAGTTGTCCGTATAAGG | + |
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Preference number: 4 (lower is better) Translates to: KPERTTWLKLPSSACWGWGSLHS*PVVRIR Trigger: CCTTATACGGACAACTGGTCAGCTGTGGAGAGAACC...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAACAAGCAGCACAGTTGAGCCTGTTACAGCAATACCCCAGTCCTTGTTCGGTCCTTGCCAGATaGGCTGTCCTGCACCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FFQQAAQLSLLQQYPSPCSVLAR*AVLHRP Trigger: AGGCCGGTGCAGGACAGCTCATCTGGCAAGGACCGA...ACAAGGACTGGGGTATTGCTGTAACAGGCTCAACTGTGCTGCTTGTTGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR GCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGGCTCCCAGGTCTTCCTaGTTAGGGACATCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KPERTTWLKLPSSACWGWAPRSS*LGTSSQ Trigger: CTGTGAAGATGTCCCTAAGCAGGAAGACCTGGGAGC...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CCA 90 bp | ATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAACTTGACCCCCTCTCTCGGTCATCTTCGGCTTaGGTTACTTCCCTCCTGATT | + |
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Preference number: 4 (lower is better) Translates to: MAEAAKFCLLGLELDPLSRSSSA*VTSLLI Trigger: AATCAGGAGGGAAGTAACCCAAGCCGAAGATGACCG...AGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTATTCATACTCCTCGCTaGCACGGCCATGTGTGTACC | + |
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Preference number: 4 (lower is better) Translates to: LGLELDPLSQLQSALASCIHTPR*HGHVCT Trigger: GGTACACACATGGCCGTGCCAGCGAGGAGTATGAAT...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTACCCATCTTCAGAAATaGTCAGCCAGGGATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLELDPLSQLQSALASCTHLQK*SARDGR Trigger: CCTGCCATCCCTGGCTGACCATTTCTGAAGATGGGT...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| 3UTR CAA 72 bp | AGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTaGCTGGGGCTGGAACTTGACCCCCTCTCTCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RKNHMAEAAKFC*LGLELDPLSQL Trigger: TAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR TCA 90 bp | GATCCCCTGAGTCCCACAGTTCAAATCATCTCAGCAGTGTCTTCTGTTCTCCCAGCGCTGGAATGGTATTaGTGGCGTCCATCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DPLSPTVQIISAVSSVLPALEWY*WRPSAA Trigger: AGCAGCTGATGGACGCCATCAATACCATTCCAGCGC...TGGGAGAACAGAAGACACTGCTGAGATGATTTGAACTGTGGGACTCAGGGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR TCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGGAGCAATGTCCACATTaGAAAAGGACAGCTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KPERTTWLKLPSSACWGWEQCPH*KRTAWR Trigger: ACGCCAAGCTGTCCTTTTTCAATGTGGACATTGCTC...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR TCA 90 bp | GCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAAACAAACTGGTGGAGCTaGCAGCTAAATGTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARKNHMAEAAKFCLLGLETNWWS*QLNVYR Trigger: CCTGTACACATTTAGCTGTCAGCTCCACCAGTTTGT...TTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAATCTCCTGGGAAGAGCTaGAGTCTATCTTCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARKNHMAEAAKFCLLGLESPGKS*SLSSES Trigger: TGACTCTGAAGATAGACTGCAGCTCTTCCCAGGAGA...TTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGTGTGAACCTCATCCTTaGCATGTTCCAGAGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPERTTWLKLPSSACWGWCEPHP*HVPELC Trigger: GCAAAGCTCTGGAACATGCCAAGGATGAGGTTCACA...CCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCAACAAGCAGCACAGTTGAGCCTGTTACAGCAATACCCCAGTCCTTGTAGCCGGTGGCGGAGTTaGGTGCCTGGGGATTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FFQQAAQLSLLQQYPSPCSRWRS*VPGDLS Trigger: TGATAAATCCCCAGGCACCCAACTCCGCCACCGGCT...ACAAGGACTGGGGTATTGCTGTAACAGGCTCAACTGTGCTGCTTGTTGGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TATTATGGCAGGAAGCATGGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAGGATGGTCAGCCAGGGATaGCAGGTGTCTTTGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YYGRKHGSTHCMGAVVERMVSQG*QVSLFN Trigger: ATTGAACAAAGACACCTGCCATCCCTGGCTGACCAT...CCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTTTCAAACTCAGGTTGTaGAGAGAGCTCCACATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLELDPLSQLQSALASCFKLRL*RELHIS Trigger: ACTGATGTGGAGCTCTCTGCACAACCTGAGTTTGAA...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTGCACTAGCTTCCTGTTGATGGCTTCCTTTACTGCTCAAGCTTTCCTTGGTGGCGGAGTTGGGTaGCTGGGGATTTATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCTSFLLMASFTAQAFLGGGVG*LGIYHW Trigger: CCAGTGATAAATCCCCAGGCACCCAACTCCGCCACC...AAGGAAAGCTTGAGCAGTAAAGGAAGCCATCAACAGGAAGCTAGTGCAGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TATTATGGCAGGAAGCATGGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAGGGAGAAGTCCAAGGTCTaGTCTTCAAACTCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YYGRKHGSTHCMGAVVEREKSKV*SSNSGC Trigger: ACAACCTGAGTTTGAAGACCAGACCTTGGACTTCTC...CCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAACTTGACCCCCTCTCTTTGCACATATTTTTGTaGACCTCATCCTTGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: MAEAAKFCLLGLELDPLSLHIFL*TSSLAC Trigger: ACATGCCAAGGATGAGGTTCACAAAAATATGTGCAA...AGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAACTTGACCCCCTCTCTTTTTCTTCATACTTTTaGGCGAGGGTTTCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MAEAAKFCLLGLELDPLSFSSYF*ARVSKI Trigger: GATCTTGGAAACCCTCGCTCAAAAGTATGAAGAAAA...AGAGAGGGGGTCAAGTTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTGCTTTGGCATTGAAATaGCATTGCAGATCTTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLELDPLSQLQSALASCALALK*HCRSLG Trigger: GCCTAAAGATCTGCAATGGCATTTCAATGCCAAAGC...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TATGGCAGGAAGCATGGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAGGTTTCATACCGGTGCCTTTTaGAAACAAATGTATGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YGRKHGSTHCMGAVVERFHTGAF*KQMYAS Trigger: TGAGGCATACATTTGTTTCCAAAAGGCACCGGTATG...AAACCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGGCTCACTGCAGGGGCTaGGGCCAGTCCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLIFLTLKPERTTWLKLAHCRG*GQSCSE Trigger: CTCAGAACAGGACTGGCCCCAGCCCCTGCAGTGAGC...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | CTGGGGCTGGAACTTGACCCCCTCTCTCAGTTACAGTCTGCACTAGCTTCCTGTCTCAAGATTTGTCACTaGGCAATATGTTTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLELDPLSQLQSALASCLKICH*AICFFD Trigger: GTCAAAGAAACATATTGCTCAGTGACAAATCTTGAG...ACAGGAAGCTAGTGCAGACTGTAACTGAGAGAGGGGGTCAAGTTCCAGCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCCATTAGTCACACTTAAAGTACTTAGCCACTTTTCTAGTCCAAAGTTCGCTTCCCGGAGGTCTTaGCACTGGTCAAGAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPLVTLKVLSHFSSPKFASRRS*HWSRGP Trigger: AGGCCCTCTTGACCAGTGCCAAGACCTCCGGGAAGC...GAACTTTGGACTAGAAAAGTGGCTAAGTACTTTAAGTGTGACTAATGGGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGTAGTGCCACTCCTAGCCCCGCCTCCACCCATGACTAAGCATTCAAATGACATGCTTTGGCATTaGAATGCCATTGCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVVPLLAPPPPMTKHSNDMLWH*NAIADL Trigger: AAGATCTGCAATGGCATTTCAATGCCAAAGCATGTC...ATTTGAATGCTTAGTCATGGGTGGAGGCGGGGCTAGGAGTGGCACTACTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | TATGGCAGGAAGCATGGCAGCACTCACTGCATGGGAGCGGTAGTGGAGAGGTTTTCCATCTCAATTATCTaGTGTTCCAATTTGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: YGRKHGSTHCMGAVVERFSISII*CSNLHI Trigger: TATGTGCAAATTGGAACAGCAGATAATTGAGATGGA...AAACCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGCTTCCTGCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTTTCCATCAGCTCCCTaGAGGCATCGAGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSGISNTMRFPIRYHLYNFPSAP*RHRGSL Trigger: GAGAGAACCTCGATGCCTGCAGGGAGCTGATGGAAA...ATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATCCAGGACAAGGAGTTTaGTCCCAGGTCTTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGISNTMRFPIRYHLYNPGQGV*SQVFLL Trigger: AAGCAGGAAGACCTGGGAGCAAACTCCTTGTCCTGG...ATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGTAGTGCCACTCCTAGCCCCGCCTCCACCCATGACTAAGCATTCAAATAACACTTCTTCCAGGTaGCTAGCGAAATTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FQVVPLLAPPPPMTKHSNNTSSR*LAKFSI Trigger: GATGGAAAATTTCGCTAGCCACCTGGAAGAAGTGTT...ATTTGAATGCTTAGTCATGGGTGGAGGCGGGGCTAGGAGTGGCACTACTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGGGGTTACTTCCCTCCTaGTTCTGCTGCTGTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLIFLTLKPERTTWLKLGLLPS*FCCCLL Trigger: CAGGAGACAGCAGCAGAATCAGGAGGGAAGTAACCC...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | CTCCCTAGGTCTATAAGTTTAGGAGACTCAAAATACTTTACATATCACAAACTGTGGTGCCTCCCACGTTaGGGGCTCGCACATAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRSISLGDSKYFTYHKLWCLPR*GLAHRW Trigger: CCATCTATGTGCGAGCCCTCAACGTGGGAGGCACCA...CAGTTTGTGATATGTAAAGTATTTTGAGTCTCCTAAACTTATAGACCTAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| 3UTR CAA 72 bp | CCAGTTAGCACCTGGCTTTTCTTTAACCTTGTCCCCTaGAGCCCAGTACTTGGCTCTAACAAATCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSTWLFFNLVP*SPVLGSNKSFP Trigger: AGGAAATGATTTGTTAGAGCCAAGTACTGGGCTCAAGGGGACAAGGTTAAAGAAAAGCCAGGTGCTAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | TTTACATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCATTCTGCTCGGTCCTTaGCAGATGAGCTGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTYHKLQFNTPRIRPHKSILLGP*QMSCPA Trigger: TGCAGGACAGCTCATCTGGCAAGGACCGAGCAGAAT...GCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | GGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTATTTCTCTGCTGCTGTCTCCTaGGAAGAGCTGCAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GISNTMRFPIRYHLYNYFSAAVS*EELQSI Trigger: GATAGACTGCAGCTCTTCCCAGGAGACAGCAGCAGA...GAAATAATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| 3UTR CAA 72 bp | CCAAAGCCTTTCATATTCTTCCAACAAGCAGCACAGTaGAGCCTGTTACAGCAATACCCCAGTCCTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPFIFFQQAAQ*SLLQQYPSPCY Trigger: ATAACAAGGACTGGGGTATTGCTGTAACAGGCTCAACTGTGCTGCTTGTTGGAAGAATATGAAAGGCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| 3UTR CAA 72 bp | AGCACAGTTGAGCCTGTTACAGCAATACCCCAGTCCTaGTTATCAACCAACTTGTGTATTAGTCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STVEPVTAIPQS*LSTNLCISHCP Trigger: AGGACAATGACTAATACACAAGTTGGTTGATAACAAGGACTGGGGTATTGCTGTAACAGGCTCAACTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | TTTACATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCTCCACCTTTTCCTCATaGCACATCTCCTCTACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTYHKLQFNTPRIRPHKSSTFSS*HISSTV Trigger: AACCGTAGAGGAGATGTGTCATGAGGAAAAGGTGGA...GCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTGCACTAGCTTCCTGTTGATGGCTTCCTTTACTGCTCAAGCTTTCCTTAGAAACTCATACCGGTaGCTTTTGGAAACAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVCTSFLLMASFTAQAFLRNSYR*LLETNV Trigger: TACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCT...AAGGAAAGCTTGAGCAGTAAAGGAAGCCATCAACAGGAAGCTAGTGCAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | TTTACATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCGGAGTCATCTTGTTGTaGAGAAACTCATACCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTYHKLQFNTPRIRPHKSGVILL*RNSYRC Trigger: GCACCGGTATGAGTTTCTGCACAACAAGATGACTCC...GCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGGAAGATTCCACAACCTCTTGTCTTATATTCTTAACTCTAAAGCCAGAGCGGCAGCTCCTTTCTaGAACTTTTCTTCTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CEGRFHNLLSYILNSKARAAAPF*NFSSHF Trigger: GAAGTGAGAAGAAAAGTTTCAGAAAGGAGCTGCCGC...TCTGGCTTTAGAGTTAAGAATATAAGACAAGAGGTTGTGGAATCTTCCTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | TTTACATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCCAAATGTATGCCTCATaGACCAGGACAAGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTYHKLQFNTPRIRPHKSQMYAS*TRTRSL Trigger: CAAACTCCTTGTCCTGGTGCATGAGGCATACATTTG...GCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR TCA 90 bp | CTCCCTAGGTCTATAAGTTTAGGAGACTCAAAATACTTTACATATCACAAACTGCTGGAGTTTTGCAAGTaGTGCAGAAGACATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRSISLGDSKYFTYHKLLEFCK*CRRHQQ Trigger: CTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAG...CAGTTTGTGATATGTAAAGTATTTTGAGTCTCCTAAACTTATAGACCTAGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| 3UTR CAA 72 bp | GTTACAGCAATACCCCAGTCCTTGTTATCAACCAACTaGTGTATTAGTCATTGTCCTGTTTCTGTGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAIPQSLLSTN*CISHCPVSVKR Trigger: TCTCTTCACAGAAACAGGACAATGACTAATACACAAGTTGGTTGATAACAAGGACTGGGGTATTGCTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | CTCCCTAGGTCTATAAGTTTAGGAGACTCAAAATACTTTACATATCACAAACTGGCATTGAAATGCCATTaGAGATCTTTAGGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRSISLGDSKYFTYHKLALKCH*RSLGIQ Trigger: CTGGATGCCTAAAGATCTGCAATGGCATTTCAATGC...CAGTTTGTGATATGTAAAGTATTTTGAGTCTCCTAAACTTATAGACCTAGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR CCA 90 bp | CTCCCTAGGTCTATAAGTTTAGGAGACTCAAAATACTTTACATATCACAAACTGTTCGTCTTCCTCCTCTaGGATGACATAGCATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LPRSISLGDSKYFTYHKLFVFLL*DDIAFI Trigger: TATGAATGCTATGTCATCCCAGAGGAGGAAGACGAA...CAGTTTGTGATATGTAAAGTATTTTGAGTCTCCTAAACTTATAGACCTAGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| 3UTR CAA 72 bp | GCTGTCTTTAACTGTGAAGGAAGATTCCACAACCTCTaGTCTTATATTCTTAACTCTAAAGCCAGAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AVFNCEGRFHNL*SYILNSKARKN Trigger: GTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGAGGTTGTGGAATCTTCCTTCACAGTTAAAGACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS-3UTR GCA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGTCTGCTGTTCCAATTTaGACATATTTTTGTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLIFLTLKPERTTWLKLSAVPI*TYFCEP Trigger: AGGTTCACAAAAATATGTGCAAATTGGAACAGCAGA...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS GCA 90 bp | CCAGGTCCTCCGCCTCAGCTGCCTCACCCCAGTCTCTCGGCTCCCTaGCTGGGTCCCTCCTCCTCATCCCGTAAGAAGGATACCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGPPPQLPHPSLSAP*LGPSSSSRKKDTPE Trigger: CTCTGGGGTATCCTTCTTACGGGATGAGGAGGAGGGACCCAGGCAGGGAGCCGAGAGACTGGGGTGAGGCAGCTGAGGCGGAGGACCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS CCA 90 bp | GTCCTCCGCCTCAGCTGCCTCACCCCAGTCTCTCGGCTCCCTGCCTaGGTCCCTCCTCCTCATCCCGTAAGAAGGATACCCCAGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLRLSCLTPVSRLPA*VPPPHPVRRIPQSP Trigger: GGGACTCTGGGGTATCCTTCTTACGGGATGAGGAGGAGGGACCCAGGCAGGGAGCCGAGAGACTGGGGTGAGGCAGCTGAGGCGGAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS CCA 90 bp | CTCCAGCATACACGCACTGAGGAGCCGGTGGCGGAGTTGGGTGCCTaGGGATTTATCACTGGAGCAGAGGGCGCTGGAATGGTATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LQHTRTEEPVAELGA*GFITGAEGAGMVLM Trigger: CATCAATACCATTCCAGCGCCCTCTGCTCCAGTGATAAATCCCCAGGCACCCAACTCCGCCACCGGCTCCTCAGTGCGTGTATGCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS CCA 90 bp | TGTCGTCAGAATATAAGCTCCAGCATACACGCACTGAGGAGCCGGTaGCGGAGTTGGGTGCCTGGGGATTTATCACTGGAGCAGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CRQNISSSIHALRSR*RSWVPGDLSLEQRA Trigger: CGCCCTCTGCTCCAGTGATAAATCCCCAGGCACCCAACTCCGCCACCGGCTCCTCAGTGCGTGTATGCTGGAGCTTATATTCTGACGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS GCA 90 bp | AGAGTCATACAGGTCCATGTGATAAAAGTGGAAGTCTTTGGGGGCTaGCGACCTGCCCAGCCCGGATTCCTCCTCTGCTTCCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RVIQVHVIKVEVFGG*RPAQPGFLLCFLLH Trigger: ATGGAGGAGGAAGCAGAGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCAAAGACTTCCACTTTTATCACATGGACCTGTATGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS CCA 90 bp | GGTATAGCTGTGTCTAGGCTGCAGCTGTATCAGGGATTCACAGGTTaGGATGCCTACGACAGATTCAGTTACCCCCGAGGCTTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GIAVSRLQLYQGFTG*DAYDRFSYPRGFWR Trigger: ACGCCAGAAGCCTCGGGGGTAACTGAATCTGTCGTAGGCATCCCAACCTGTGAATCCCTGATACAGCTGCAGCCTAGACACAGCTATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS TCA 90 bp | TGTTTCTTTGACCATCATGGTGAATTCTGCTCGGTCCTTGCCAGATaGGCTGTCCTGCACCGGCCTATAGGACAGCTGGTAGCTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFFDHHGEFCSVLAR*AVLHRPIGQLVALH Trigger: GTGGAGAGCTACCAGCTGTCCTATAGGCCGGTGCAGGACAGCTCATCTGGCAAGGACCGAGCAGAATTCACCATGATGGTCAAAGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS GCA 90 bp | ACTGGAGCAGAGGGCGCTGGAATGGTATTGATGGCGTCCATCAGCTaGTCCACATCAGAGAAGTCCAAGGTCTGGTCTTCAAACTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGAEGAGMVLMASIS*STSEKSKVWSSNSG Trigger: ACCTGAGTTTGAAGACCAGACCTTGGACTTCTCTGATGTGGAGCAGCTGATGGACGCCATCAATACCATTCCAGCGCCCTCTGCTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | TATCTTCAGAGTCATACAGGTCCATGTGATAAAAGTGGAAGTCTTTaGGGGCTGCCGACCTGCCCAGCCCGGATTCCTCCTCTGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLQSHTGPCDKSGSL*GLPTCPARIPPLLP Trigger: AGGAAGCAGAGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCAAAGACTTCCACTTTTATCACATGGACCTGTATGACTCTGAAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | AGTGATGCAGAAGACATCAGCAGGCTCTTCTTCGTCTTCCTCCTCTaGGATGACATAGCATTCATACTCCTCGCTGGCACGGCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SDAEDISRLFFVFLL*DDIAFILLAGTAMC Trigger: ACACATGGCCGTGCCAGCGAGGAGTATGAATGCTATGTCATCCCAGAGGAGGAAGACGAAGAAGAGCCTGCTGATGTCTTCTGCATCACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | TTTCAAGTAGTGCCACTCCTAGCCCCGCCTCCACCCATGACTAAGCATTCAAATAATTCTGCTCGGTCCTaGCCAGATGAGCTGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQVVPLLAPPPPMTKHSNNSARS*PDELSC Trigger: GCAGGACAGCTCATCTGGCAAGGACCGAGCAGAATT...ATTTGAATGCTTAGTCATGGGTGGAGGCGGGGCTAGGAGTGGCACTACTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 90 bp | CGGACCGGAATCAGATTCCCCATGACAGCAACACACCTGGTAAATTaGGTCTTGCTCGGCGGCAGCTCCTTTCTGAAACTTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTGIRFPMTATHLVN*VLLGGSSFLKLFFS Trigger: TGAGAAGAAAAGTTTCAGAAAGGAGCTGCCGCCGAGCAAGACGCAATTTACCAGGTGTGTTGCTGTCATGGGGAATCTGATTCCGGTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 90 bp | CCTTTTGGAAACAAATGTATGCCTCATGCACCAGGACAAGGAGTTTaGTCCCAGGTCTTCCTGCTTAGGGACATCTTCACAGGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: PFGNKCMPHAPGQGV*SQVFLLRDIFTGHT Trigger: GGTGTGGCCTGTGAAGATGTCCCTAAGCAGGAAGACCTGGGAGCAAACTCCTTGTCCTGGTGCATGAGGCATACATTTGTTTCCAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | CAGCAGCACGCCAATCTTCCTCGGAGCAACTGTGATCCTGATGTCTaGAGTCATCTTGTTGTGCAGAAACTCATACCGGTGCCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QQHANLPRSNCDPDV*SHLVVQKLIPVPFG Trigger: TCCAAAAGGCACCGGTATGAGTTTCTGCACAACAAGATGACTCCAGACATCAGGATCACAGTTGCTCCGAGGAAGATTGGCGTGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GCCAGAAAGAACCACATGGCTGAAGCTGCCAAGTTCTGCTTGCTGGGGCTGGAAAGCTCCACATCAGTTTaGGTTTTCAGGAATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARKNHMAEAAKFCLLGLESSTSV*VFRNFP Trigger: GGGGAAATTCCTGAAAACCAAAACTGATGTGGAGCT...TTCCAGCCCCAGCAAGCAGAACTTGGCAGCTTCAGCCATGTGGTTCTTTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | TCTTGTCTTATATTCTTAACTCTAAAGCCAGAAAGAACCACATGGCTGAAGCTGGGCTTCCCGGAGGTCTaGGCACTGGTCAAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLIFLTLKPERTTWLKLGFPEV*ALVKRA Trigger: GGCCCTCTTGACCAGTGCCAAGACCTCCGGGAAGCC...CAGCTTCAGCCATGTGGTTCTTTCTGGCTTTAGAGTTAAGAATATAAGACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 90 bp | TTGTTGTGCAGAAACTCATACCGGTGCCTTTTGGAAACAAATGTATaGCTCATGCACCAGGACAAGGAGTTTGCTCCCAGGTCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLCRNSYRCLLETNV*LMHQDKEFAPRSSC Trigger: GCAGGAAGACCTGGGAGCAAACTCCTTGTCCTGGTGCATGAGGCATACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCTGCACAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GATCCCCTGAGTCCCACAGTTCAAATCATCTCAGCAGTGTCTTCTGTTCTCCCATCTGGAGTCATCTTGTaGTGCAGAAACTCATACCGG | + |
|
Preference number: 5 (lower is better) Translates to: DPLSPTVQIISAVSSVLPSGVIL*CRNSYR Trigger: CCGGTATGAGTTTCTGCACAACAAGATGACTCCAGA...TGGGAGAACAGAAGACACTGCTGAGATGATTTGAACTGTGGGACTCAGGGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTATTTCGGCGCTGGAATGGTATaGATGGCGTCCATCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GISNTMRFPIRYHLYNYFGAGMV*MASISC Trigger: GCAGCTGATGGACGCCATCAATACCATTCCAGCGCC...GAAATAATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTATTTCACCAGGACAAGGAGTTaGCTCCCAGGTCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GISNTMRFPIRYHLYNYFTRTRS*LPGLPA Trigger: AGCAGGAAGACCTGGGAGCAAACTCCTTGTCCTGGT...GAAATAATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS TCA 90 bp | GTGTATCAAAATCCTTCTCAACAGTTCTTACTGGAGTTTTGCAAGTaGTGCAGAAGACATCAGCAGGCTCTTCTTCGTCTTCCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYQNPSQQFLLEFCK*CRRHQQALLRLPPL Trigger: CAGAGGAGGAAGACGAAGAAGAGCCTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAGTAAGAACTGTTGAGAAGGATTTTGATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GTTCTCCCATTAGTCACACTTAAAGTACTTAGCCACTTTTCTAGTCCAAAGTTCGTCTTCAAACTCAGGTaGTGCAGAGAGCTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: VLPLVTLKVLSHFSSPKFVFKLR*CRELHI Trigger: GATGTGGAGCTCTCTGCACAACCTGAGTTTGAAGAC...GAACTTTGGACTAGAAAAGTGGCTAAGTACTTTAAGTGTGACTAATGGGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | TTCGTGTTCCTTGTGTGTATCAAAATCCTTCTCAACAGTTCTTACTaGAGTTTTGCAAGTGATGCAGAAGACATCAGCAGGCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVFLVCIKILLNSSY*SFASDAEDISRLFF Trigger: GAAGAAGAGCCTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAGTAAGAACTGTTGAGAAGGATTTTGATACACACAAGGAACACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | ATTTTTGTGAACCTCATCCTTGGCATGTTCCAGAGCTTTGCTGATTaGGGTTACTTCGTGTTCCTTGTGTGTATCAAAATCCTTCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFVNLILGMFQSFAD*GYFVFLVCIKILLN Trigger: GTTGAGAAGGATTTTGATACACACAAGGAACACGAAGTAACCCCAATCAGCAAAGCTCTGGAACATGCCAAGGATGAGGTTCACAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | CATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCCCTCTTTTTCTTCATACTTTaGAGCGAGGGTTTCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HITNCNLTLQEFDPTRALFFFIL*SEGFQD Trigger: ATCTTGGAAACCCTCGCTCAAAAGTATGAAGAAAAA...GAGGGCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | GGTATCTCCAACACCATGAGGTTTCCAATCAGGTATCACCTTTACAATTATTTCGGTGTCTTTGTTCAATaGGAAGTAGCTTCCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GISNTMRFPIRYHLYNYFGVFVQ*EVASCG Trigger: ACCACAGGAAGCTACTTCCAATTGAACAAAGACACC...GAAATAATTGTAAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS-3UTR CAA 90 bp | TTTACATATCACAAACTGCAATTTAACACTCCAAGAATTCGACCCCACAAGAGCTCATACCGGTGCCTTTaGGAAACAAATGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTYHKLQFNTPRIRPHKSSYRCL*ETNVCL Trigger: GAGGCATACATTTGTTTCCAAAAGGCACCGGTATGA...GCTCTTGTGGGGTCGAATTCTTGGAGTGTTAAATTGCAGTTTGTGATATGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS TCA 90 bp | TATGACCCAAAACTCATACTGAGTATTTGGCTCAAGATTTGTCACTaGGCAATATGTTTCTTTGACCATCATGGTGAATTCTGCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YDPKLILSIWLKICH*AICFFDHHGEFCSV Trigger: GACCGAGCAGAATTCACCATGATGGTCAAAGAAACATATTGCTCAGTGACAAATCTTGAGCCAAATACTCAGTATGAGTTTTGGGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 90 bp | TGTCTTCCAAAATTCTCCTCCACAGTAATGAACACTTCTTCCAGGTaGCTAGCGAAATTTTCCATCTCAATTATCTGCTGTTCCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLPKFSSTVMNTSSR*LAKFSISIICCSNL Trigger: CAAATTGGAACAGCAGATAATTGAGATGGAAAATTTCGCTAGCCACCTGGAAGAAGTGTTCATTACTGTGGAGGAGAATTTTGGAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | GGCTTCCCGGAGGTCTTGGCACTGGTCAAGAGGGCCTaGCCCTCCTCCGTAGCCCAGGTCCTCCGCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GFPEVLALVKRA*PSSVAQVLRLS Trigger: GCTGAGGCGGAGGACCTGGGCTACGGAGGAGGGCAAGGCCCTCTTGACCAGTGCCAAGACCTCCGGGAAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | CCGCCTCAGCTGCCTCACCCCAGTCTCTCGGCTCCCTaGCTGGGTCCCTCCTCCTCATCCCGTAAGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPQLPHPSLSAP*LGPSSSSRKKD Trigger: ATCCTTCTTACGGGATGAGGAGGAGGGACCCAGGCAGGGAGCCGAGAGACTGGGGTGAGGCAGCTGAGGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | CTCGCTGGCACGGCCATGTGTGTACCTGTAGGCTTCCCGGAGGTCTaGGCACTGGTCAAGAGGGCCTTGCCCTCCTCCGTAGCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAGTAMCVPVGFPEV*ALVKRALPSSVAQV Trigger: GACCTGGGCTACGGAGGAGGGCAAGGCCCTCTTGACCAGTGCCAAGACCTCCGGGAAGCCTACAGGTACACACATGGCCGTGCCAGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 72 bp | ACACGCACTGAGGAGCCGGTGGCGGAGTTGGGTGCCTaGGGATTTATCACTGGAGCAGAGGGCGCTGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: TRTEEPVAELGA*GFITGAEGAGM Trigger: CATTCCAGCGCCCTCTGCTCCAGTGATAAATCCCCAGGCACCCAACTCCGCCACCGGCTCCTCAGTGCGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | ACGGCCATGTGTGTACCTGTAGGCTTCCCGGAGGTCTaGGCACTGGTCAAGAGGGCCTTGCCCTCCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: TAMCVPVGFPEV*ALVKRALPSSV Trigger: TACGGAGGAGGGCAAGGCCCTCTTGACCAGTGCCAAGACCTCCGGGAAGCCTACAGGTACACACATGGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | TGTGATAAAAGTGGAAGTCTTTGGGGGCTGCCGACCTaGCCAGCCCGGATTCCTCCTCTGCTTCCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CDKSGSLWGLPT*PARIPPLLPPP Trigger: TGGAGGAGGAAGCAGAGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCAAAGACTTCCACTTTTATCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | CAGGTCCATGTGATAAAAGTGGAAGTCTTTGGGGGCTaGCGACCTGCCCAGCCCGGATTCCTCCTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QVHVIKVEVFGG*RPAQPGFLLCF Trigger: GAAGCAGAGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCAAAGACTTCCACTTTTATCACATGGACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | ATGCACCAGGACAAGGAGTTTGCTCCCAGGTCTTCCTaGTTAGGGACATCTTCACAGGCCACACCCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: MHQDKEFAPRSS*LGTSSQATPTV Trigger: CACTGTGGGTGTGGCCTGTGAAGATGTCCCTAAGCAGGAAGACCTGGGAGCAAACTCCTTGTCCTGGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 72 bp | AGTCATACAGGTCCATGTGATAAAAGTGGAAGTCTTTaGGGGCTGCCGACCTGCCCAGCCCGGATTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SHTGPCDKSGSL*GLPTCPARIPP Trigger: AGGAGGAATCCGGGCTGGGCAGGTCGGCAGCCCCCAAAGACTTCCACTTTTATCACATGGACCTGTATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 72 bp | GTGTCTAGGCTGCAGCTGTATCAGGGATTCACAGGTTaGGATGCCTACGACAGATTCAGTTACCCCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRLQLYQGFTG*DAYDRFSYPRG Trigger: GCCTCGGGGGTAACTGAATCTGTCGTAGGCATCCCAACCTGTGAATCCCTGATACAGCTGCAGCCTAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS TCA 72 bp | ATTCACGGTCATCTTCGGCTTGGGTTACTTCCCTCCTaGTTCTGCTGCTGTCTCCTGGGAAGAGCTGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IHGHLRLGLLPS*FCCCLLGRAAV Trigger: GACTGCAGCTCTTCCCAGGAGACAGCAGCAGAATCAGGAGGGAAGTAACCCAAGCCGAAGATGACCGTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | GAGGGCGCTGGAATGGTATTGATGGCGTCCATCAGCTaGTCCACATCAGAGAAGTCCAAGGTCTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EGAGMVLMASIS*STSEKSKVWSS Trigger: TGAAGACCAGACCTTGGACTTCTCTGATGTGGAGCAGCTGATGGACGCCATCAATACCATTCCAGCGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 72 bp | GAAGACATCAGCAGGCTCTTCTTCGTCTTCCTCCTCTaGGATGACATAGCATTCATACTCCTCGCTGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: EDISRLFFVFLL*DDIAFILLAGT Trigger: CGTGCCAGCGAGGAGTATGAATGCTATGTCATCCCAGAGGAGGAAGACGAAGAAGAGCCTGCTGATGTCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | TCGGACCGGAATCAGATTCCCCATGACAGCAACACACCTGGTAAATaGCGTCTTGCTCGGCGGCAGCTCCTTTCTGAAACTTTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDRNQIPHDSNTPGK*RLARRQLLSETFLL Trigger: GAGAAGAAAAGTTTCAGAAAGGAGCTGCCGCCGAGCAAGACGCAATTTACCAGGTGTGTTGCTGTCATGGGGAATCTGATTCCGGTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS TCA 72 bp | GATTTATCACTGGAGCAGAGGGCGCTGGAATGGTATTaGTGGCGTCCATCAGCTGCTCCACATCAGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLSLEQRALEWY*WRPSAAPHQRS Trigger: ACTTCTCTGATGTGGAGCAGCTGATGGACGCCATCAATACCATTCCAGCGCCCTCTGCTCCAGTGATAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | ATCAGATTCCCCATGACAGCAACACACCTGGTAAATTaGGTCTTGCTCGGCGGCAGCTCCTTTCTGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: IRFPMTATHLVN*VLLGGSSFLKL Trigger: AAGTTTCAGAAAGGAGCTGCCGCCGAGCAAGACGCAATTTACCAGGTGTGTTGCTGTCATGGGGAATCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | CATACCGGTGCCTTTTGGAAACAAATGTATGCCTCATaGACCAGGACAAGGAGTTTGCTCCCAGGTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HTGAFWKQMYAS*TRTRSLLPGLP Trigger: AGGAAGACCTGGGAGCAAACTCCTTGTCCTGGTGCATGAGGCATACATTTGTTTCCAAAAGGCACCGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS GCA 72 bp | AGAAACTCATACCGGTGCCTTTTGGAAACAAATGTATaGCTCATGCACCAGGACAAGGAGTTTGCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNSYRCLLETNV*LMHQDKEFAPR Trigger: CCTGGGAGCAAACTCCTTGTCCTGGTGCATGAGGCATACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | GTCTGGTCTTCAAACTCAGGTTGTGCAGAGAGCTCCACATCAGTTTaGGTTTTCAGGAATTTCCCCAGTCTGTCAGTCATAGCCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VWSSNSGCAESSTSV*VFRNFPSLSVIATA Trigger: TGCAGTGGCTATGACTGACAGACTGGGGAAATTCCTGAAAACCAAAACTGATGTGGAGCTCTCTGCACAACCTGAGTTTGAAGACCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | CTGCTCCACATCAGAGAAGTCCAAGGTCTGGTCTTCAAACTCAGGTaGTGCAGAGAGCTCCACATCAGTTTTGGTTTTCAGGAATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLHIREVQGLVFKLR*CRELHISFGFQEFP Trigger: GGGAAATTCCTGAAAACCAAAACTGATGTGGAGCTCTCTGCACAACCTGAGTTTGAAGACCAGACCTTGGACTTCTCTGATGTGGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | GGAGCAACTGTGATCCTGATGTCTGGAGTCATCTTGTaGTGCAGAAACTCATACCGGTGCCTTTTGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: GATVILMSGVIL*CRNSYRCLLET Trigger: TGTTTCCAAAAGGCACCGGTATGAGTTTCTGCACAACAAGATGACTCCAGACATCAGGATCACAGTTGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | ATCTTCCTCGGAGCAACTGTGATCCTGATGTCTGGAGTCATCTTGTaGTGCAGAAACTCATACCGGTGCCTTTTGGAAACAAATGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: IFLGATVILMSGVIL*CRNSYRCLLETNVC Trigger: GCATACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCTGCACAACAAGATGACTCCAGACATCAGGATCACAGTTGCTCCGAGGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | CCAATCTTCCTCGGAGCAACTGTGATCCTGATGTCTGGAGTCATCTaGTTGTGCAGAAACTCATACCGGTGCCTTTTGGAAACAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: PIFLGATVILMSGVI*LCRNSYRCLLETNV Trigger: TACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCTGCACAACAAGATGACTCCAGACATCAGGATCACAGTTGCTCCGAGGAAGATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS GCA 72 bp | AGAGAAGTCCAAGGTCTGGTCTTCAAACTCAGGTTGTaGAGAGAGCTCCACATCAGTTTTGGTTTTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: REVQGLVFKLRL*RELHISFGFQE Trigger: TTCCTGAAAACCAAAACTGATGTGGAGCTCTCTGCACAACCTGAGTTTGAAGACCAGACCTTGGACTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CCA 72 bp | TCATCTTGTTGTGCAGAAACTCATACCGGTGCCTTTTaGAAACAAATGTATGCCTCATGCACCAGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCCAETHTGAF*KQMYASCTRTR Trigger: CCTTGTCCTGGTGCATGAGGCATACATTTGTTTCCAAAAGGCACCGGTATGAGTTTCTGCACAACAAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
||
| CDS CCA 72 bp | AACCTCATCCTTGGCATGTTCCAGAGCTTTGCTGATTaGGGTTACTTCGTGTTCCTTGTGTGTATCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: NLILGMFQSFAD*GYFVFLVCIKI Trigger: GATTTTGATACACACAAGGAACACGAAGTAACCCCAATCAGCAAAGCTCTGGAACATGCCAAGGATGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | TCAAACTCAGGTTGTGCAGAGAGCTCCACATCAGTTTaGGTTTTCAGGAATTTCCCCAGTCTGTCAGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SNSGCAESSTSV*VFRNFPSLSVI Trigger: TATGACTGACAGACTGGGGAAATTCCTGAAAACCAAAACTGATGTGGAGCTCTCTGCACAACCTGAGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 90 bp | TCCTTGTGTGTATCAAAATCCTTCTCAACAGTTCTTACTGGAGTTTaGCAAGTGATGCAGAAGACATCAGCAGGCTCTTCTTCGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLCVSKSFSTVLTGV*QVMQKTSAGSSSSS Trigger: GGAAGACGAAGAAGAGCCTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAGTAAGAACTGTTGAGAAGGATTTTGATACACACAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS TCA 72 bp | AATCCTTCTCAACAGTTCTTACTGGAGTTTTGCAAGTaGTGCAGAAGACATCAGCAGGCTCTTCTTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: NPSQQFLLEFCK*CRRHQQALLRL Trigger: AAGACGAAGAAGAGCCTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAGTAAGAACTGTTGAGAAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | GTATCAAAATCCTTCTCAACAGTTCTTACTGGAGTTTaGCAAGTGATGCAGAAGACATCAGCAGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSKSFSTVLTGV*QVMQKTSAGSS Trigger: AGAAGAGCCTGCTGATGTCTTCTGCATCACTTGCAAAACTCCAGTAAGAACTGTTGAGAAGGATTTTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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| CDS CAA 72 bp | TCCAGAGCTTTGCTGATTGGGGTTACTTCGTGTTCCTaGTGTGTATCAAAATCCTTCTCAACAGTTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: SRALLIGVTSCS*CVSKSFSTVLT Trigger: AGTAAGAACTGTTGAGAAGGATTTTGATACACACAAGGAACACGAAGTAACCCCAATCAGCAAAGCTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042318.6 |
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