Pregenerated sensors for FSD1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054752Ensembl transcript IDs: ENSMUST00000129648.3, ENSMUST00000132151.8, ENSMUST00000159415.9, ENSMUST00000163067.9, ENSMUST00000180164.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGAAGGTCTCAATGATGGGACAAGGACAAGGAAGAAGCACACTTaGTCCTCTGGCCTCAATAGAAGGCCTGCACCACTATGGTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: DEGLNDGTRTRKKHT*SSGLNRRPAPLWSS Trigger: ACTGGACCATAGTGGTGCAGGCCTTCTATTGAGGCCAGAGGAGCAAGTGTGCTTCTTCCTTGTCCTTGTCCCATCATTGAGACCTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 90 bp | ATTCTAGTAGTTCCTCAGAGTTCTCCAGGGCATTGTTACATTGACTaGGCTGACTCTGTAACTCCTGGGACTTGCGCACTTGCTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ILVVPQSSPGHCYID*ADSVTPGTCALAPA Trigger: AGCAGGAGCAAGTGCGCAAGTCCCAGGAGTTACAGAGTCAGCTCAGTCAATGTAACAATGCCCTGGAGAACTCTGAGGAACTACTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR TCA 90 bp | TCACTACTCAATATCACTATGTCAGCCTCCTGCACCCCAACTGCTTaGTTCTGGGACGCAGGCAATAACCTCCATGGCTGCTTCCTATTT | + |
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Preference number: 1 (lower is better) Translates to: SLLNITMSASCTPTA*FWDAGNNLHGCFLF Trigger: AAATAGGAAGCAGCCATGGAGGTTATTGCCTGCGTCCCAGAATCAAGCAGTTGGGGTGCAGGAGGCTGACATAGTGATATTGAGTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR CCA 90 bp | ACAAACTTAGAGAGCACGGTTTCTCAGGTGGTGCCCAGGAGCTGGTaGAGGAATGGACAGAATGACTCAACACAAACACACAAGAATACT | + |
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Preference number: 1 (lower is better) Translates to: TNLESTVSQVVPRSW*RNGQNDSTQTHKNT Trigger: AGTATTCTTGTGTGTTTGTGTTGAGTCATTCTGTCCATTCCTCCACCAGCTCCTGGGCACCACCTGAGAAACCGTGCTCTCTAAGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 90 bp | AGTATCCAAACACAACCATTCTTAGTGGAAACCACCCAGTTCACATaGGAGTCCGTTTCACTACACTCCTCACAACAGCCCTGTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: SIQTQPFLVETTQFT*ESVSLHSSQQPCEV Trigger: TACCTCACAGGGCTGTTGTGAGGAGTGTAGTGAAACGGACTCTCATGTGAACTGGGTGGTTTCCACTAAGAATGGTTGTGTTTGGATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR CCA 90 bp | AGAAAACCTGATTCCACCACTCAGAAATATCTGTTAGTAACTGTGTaGGAAAGGCCACACAGTCAAAGGGAAGGGAAACAGTCTGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: RKPDSTTQKYLLVTV*ERPHSQREGKQSEL Trigger: CAACTCAGACTGTTTCCCTTCCCTTTGACTGTGTGGCCTTTCCCACACAGTTACTAACAGATATTTCTGAGTGGTGGAATCAGGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 90 bp | CTGGTACAAAGTTCCTATGGTACTCAGGTAATCATCCCGCTCAGGTaGCACAATACTGACATCAGAATCACAAATGTGAACACTGTTACG | + |
|
Preference number: 1 (lower is better) Translates to: LVQSSYGTQVIIPLR*HNTDIRITNVNTVT Trigger: CGTAACAGTGTTCACATTTGTGATTCTGATGTCAGTATTGTGTCACCTGAGCGGGATGATTACCTGAGTACCATAGGAACTTTGTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR GCA 90 bp | GTTCCAAGCCAAGCAAATACATTCACTGACCTCTGCCCTACATACTaGATAAACTTCTACATGTTTATTCCTAAGCACCAACTTGACTAT | + |
|
Preference number: 1 (lower is better) Translates to: VPSQANTFTDLCPTY*INFYMFIPKHQLDY Trigger: ATAGTCAAGTTGGTGCTTAGGAATAAACATGTAGAAGTTTATGCAGTATGTAGGGCAGAGGTCAGTGAATGTATTTGCTTGGCTTGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 90 bp | ATATGGTTGGGTAGTCAGATAAAGTTCTATGGTAATTACTGGTATTaGTTACTAAGCCAGTATCATATGGCATGTCCAACGTTCCAATGC | + |
|
Preference number: 1 (lower is better) Translates to: IWLGSQIKFYGNYWY*LLSQYHMACPTFQC Trigger: GCATTGGAACGTTGGACATGCCATATGATACTGGCTTAGTAATCAATACCAGTAATTACCATAGAACTTTATCTGACTACCCAACCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 90 bp | ATCATCCAATATAGAGTACAAGCTATCAAATTCTTCATCCAACTCTaGAAGGATGTTGGAAGAATTTTCCTGAACTCCTTTCAGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: IIQYRVQAIKFFIQL*KDVGRIFLNSFQCV Trigger: CACACACTGAAAGGAGTTCAGGAAAATTCTTCCAACATCCTTTCAGAGTTGGATGAAGAATTTGATAGCTTGTACTCTATATTGGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCGGTTTCTCAGGTGGTaGCCAGGAGCTGGTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRFLRW*PGAGGG Trigger: TCCTCCACCAGCTCCTGGGCACCACCTGAGAAACCG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGCACGGTTTCTCAGGTaGTGCCCAGGAGCTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHARFLR*CPGAGG Trigger: TCCACCAGCTCCTGGGCACCACCTGAGAAACCGTGC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGTGGTGCCCAGGAGCTaGTGGAGGAATGGACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHVVPRS*WRNGQN Trigger: ATTCTGTCCATTCCTCCACCAGCTCCTGGGCACCAC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTGTAATGACAGCCGGTaGGGAGCAGAAACAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHCNDSR*GAETEQ Trigger: TTGCTCTGTTTCTGCTCCTCACCGGCTGTCATTACA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATACAGGTTTTGCTCACTaGTTCCCACATGCCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHTGFAH*FPHAFR Trigger: TCTGAAGGCATGTGGGAAGCAGTGAGCAAAACCTGT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAGGAAGAAGCACACTTaGTCCTCTGGCCTCAATAGA | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRKKHT*SSGLNR Trigger: TCTATTGAGGCCAGAGGAGCAAGTGTGCTTCTTCCT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAATAACCACAGGTTTTaGTCACTGCTTCCCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHNNHRF*SLLPTC Trigger: GCATGTGGGAAGCAGTGAGCAAAACCTGTGGTTATT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTGGTCCAGTGTTGCCTaGCTTAAAGTCAGTAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHWSSVA*LKVSRQ Trigger: TTGTCTACTGACTTTAAGGCAGGCAACACTGGACCA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTCGTGCGTTTTCCAATaGCTGTTTGGAAACTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHSCVFQ*LFGNCR Trigger: TCTACAGTTTCCAAACAGTCATTGGAAAACGCACGA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAAAGACGAAAGGCTGAAGCCATTGTGACTCTATCCTTGATCTGTCTGGCACATTGTTACATTGACTaGGCTGACTCTGTAACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KERRKAEAIVTLSLICLAHCYID*ADSVTP Trigger: AGGAGTTACAGAGTCAGCTCAGTCAATGTAACAATG...TGCCAGACAGATCAAGGATAGAGTCACAATGGCTTCAGCCTTTCGTCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTGGACTCTCATTCACTaGCGTTATACTTCATTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHWTLIH*RYTSFY Trigger: GTAGAATGAAGTATAACGTCAGTGAATGAGAGTCCA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATATTCTACAAATCTGCTaGGAAATAAAACCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHILQIC*EIKPSG Trigger: CCCAGAAGGTTTTATTTCTCAGCAGATTTGTAGAAT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAGAAATAAAACCTTCTaGGTAACTGTCGTGCGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRNKTF*VTVVRF Trigger: AAAACGCACGACAGTTACCCAGAAGGTTTTATTTCT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATATAGGTCAATTTCTCTaGCTAGGCAAAGATTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHIGQFL*LGKDFN Trigger: ATTGAAATCTTTGCCTAGGCAGAGAAATTGACCTAT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR CAA 90 bp | TCAATAAAGTTGATATTTATCAAGGGCATCAAATTGCTGACCCACTaGGTTGTTGGAAAAGTTAATTCAGCCACGTTCACTCTGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: SIKLIFIKGIKLLTH*VVGKVNSATFTLHG Trigger: CCCATGCAGAGTGAACGTGGCTGAATTAACTTTTCCAACAACCAAGTGGGTCAGCAATTTGATGCCCTTGATAAATATCAACTTTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTTTAATATCTAATGACCTTGTTGCAAATTCTAGTAGTTCCTCAGAGTTCTTCTTCATCCAACTCTaGAAGGATGTTGGAAGAATT | + |
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Preference number: 2 (lower is better) Translates to: GSLISNDLVANSSSSSEFFFIQL*KDVGRI Trigger: AATTCTTCCAACATCCTTTCAGAGTTGGATGAAGAA...GAACTCTGAGGAACTACTAGAATTTGCAACAAGGTCATTAGATATTAAAGAACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR CCA 72 bp | GAGAGCACGGTTTCTCAGGTGGTGCCCAGGAGCTGGTaGAGGAATGGACAGAATGACTCAACACAAACACAC | + |
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Preference number: 3 (lower is better) Translates to: ESTVSQVVPRSW*RNGQNDSTQTH Trigger: GTGTGTTTGTGTTGAGTCATTCTGTCCATTCCTCCACCAGCTCCTGGGCACCACCTGAGAAACCGTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAGAGGGCTGGCCAGCTaGCCACAGCTGACTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRGLAS*PQLTEL Trigger: CAGCTCAGTCAGCTGTGGCAAGCTGGCCAGCCCTCT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 72 bp | AATATCACTATGTCAGCCTCCTGCACCCCAACTGCTTaGTTCTGGGACGCAGGCAATAACCTCCATGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: NITMSASCTPTA*FWDAGNNLHGC Trigger: GCAGCCATGGAGGTTATTGCCTGCGTCCCAGAATCAAGCAGTTGGGGTGCAGGAGGCTGACATAGTGATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCTGCACCCCAACTGCTaGATTCTGGGACGCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHLHPNC*ILGRRQ Trigger: TTGCCTGCGTCCCAGAATCAAGCAGTTGGGGTGCAG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR GCA 72 bp | CTCAATGATGGGACAAGGACAAGGAAGAAGCACACTTaGTCCTCTGGCCTCAATAGAAGGCCTGCACCACTA | + |
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Preference number: 3 (lower is better) Translates to: LNDGTRTRKKHT*SSGLNRRPAPL Trigger: TAGTGGTGCAGGCCTTCTATTGAGGCCAGAGGAGCAAGTGTGCTTCTTCCTTGTCCTTGTCCCATCATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR CCA 72 bp | TTAGAGAGCACGGTTTCTCAGGTGGTGCCCAGGAGCTaGTGGAGGAATGGACAGAATGACTCAACACAAACA | + |
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Preference number: 3 (lower is better) Translates to: LESTVSQVVPRS*WRNGQNDSTQT Trigger: TGTTTGTGTTGAGTCATTCTGTCCATTCCTCCACCAGCTCCTGGGCACCACCTGAGAAACCGTGCTCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 72 bp | GTTCCTCAGAGTTCTCCAGGGCATTGTTACATTGACTaGGCTGACTCTGTAACTCCTGGGACTTGCGCACTT | + |
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Preference number: 3 (lower is better) Translates to: VPQSSPGHCYID*ADSVTPGTCAL Trigger: AAGTGCGCAAGTCCCAGGAGTTACAGAGTCAGCTCAGTCAATGTAACAATGCCCTGGAGAACTCTGAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR TCA 72 bp | ACACAACCATTCTTAGTGGAAACCACCCAGTTCACATaGGAGTCCGTTTCACTACACTCCTCACAACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: TQPFLVETTQFT*ESVSLHSSQQP Trigger: GGGCTGTTGTGAGGAGTGTAGTGAAACGGACTCTCATGTGAACTGGGTGGTTTCCACTAAGAATGGTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCACTATGGTCCAGTGTaGCCTGCCTTAAAGTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHHYGPV*PALKSV Trigger: TACTGACTTTAAGGCAGGCAACACTGGACCATAGTG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR CCA 72 bp | TATCCCTTACAGTCCACCTCCCCTATATTTCCTTCATaGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: YPLQSTSPIFPS*KAAMSKLCKQT Trigger: TGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGGAGGTGGACTGTAAGGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCTTCTCCAGGGAAGTTaGTCAGAAGTCCAAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHLLQGS*SEVQET Trigger: AGTTTCTTGGACTTCTGACAAACTTCCCTGGAGAAG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTCGTGTGATAAGAACTaGGACTCTCATTCACTGACG | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHSCDKN*DSHSLT Trigger: CGTCAGTGAATGAGAGTCCAAGTTCTTATCACACGA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCACAAGAATACTCCTTaGCACTGCCTAAATTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHHKNTP*HCLNSL Trigger: CAGAGAATTTAGGCAGTGCAAAGGAGTATTCTTGTG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 72 bp | GTCACTGACTTTTGGTTTCAAAGAAAGACGAAAGGCTaGAGCCATTGTGACTCTATCCTTGATCTGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VTDFWFQRKTKG*SHCDSILDLSG Trigger: GCCAGACAGATCAAGGATAGAGTCACAATGGCTTCAGCCTTTCGTCTTTCTTTGAAACCAAAAGTCAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATATGGCTGCTTCCTATTaGGTAGTTAATCTAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHMAASY*VVNLTD Trigger: GTCTGTTAGATTAACTACCAAATAGGAAGCAGCCAT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 72 bp | TACTCAGGTAATCATCCCGCTCAGGTGACACAATACTaGCATCAGAATCACAAATGTGAACACTGTTACGAG | + |
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Preference number: 3 (lower is better) Translates to: YSGNHPAQVTQY*HQNHKCEHCYE Trigger: CTCGTAACAGTGTTCACATTTGTGATTCTGATGTCAGTATTGTGTCACCTGAGCGGGATGATTACCTGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR TCA 72 bp | AGTTCCTATGGTACTCAGGTAATCATCCCGCTCAGGTaGCACAATACTGACATCAGAATCACAAATGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SSYGTQVIIPLR*HNTDIRITNVN Trigger: GTTCACATTTGTGATTCTGATGTCAGTATTGTGTCACCTGAGCGGGATGATTACCTGAGTACCATAGGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR GCA 72 bp | CTAAGCCAGTATCATATGGCATGTCCAACGTTCCAATaGGAACAAAAGCAGCAAACAGTCCACTTAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LSQYHMACPTFQ*EQKQQTVHLNS Trigger: GGAATTTAAGTGGACTGTTTGCTGCTTTTGTTCGCATTGGAACGTTGGACATGCCATATGATACTGGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| 3UTR GCA 72 bp | TCGTTTGCTTACGTAGGCTTCCCCGCTACACATGAATaGTGCAGTAGACTTTATAACTTGGAAAAGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFAYVGFPATHE*CSRLYNLEKLC Trigger: ACACAACTTTTCCAAGTTATAAAGTCTACTGCAGCATTCATGTGTAGCGGGGAAGCCTACGTAAGCAAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTTTTCCAATGACTGTTaGGAAACTGTAGATGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHFSNDC*ETVDEG Trigger: ACCTTCATCTACAGTTTCCAAACAGTCATTGGAAAA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR GCA 72 bp | TTTGCTTACGTAGGCTTCCCCGCTACACATGAATGCTaGAGTAGACTTTATAACTTGGAAAAGTTGTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: FAYVGFPATHEC*SRLYNLEKLCS Trigger: ACTACACAACTTTTCCAAGTTATAAAGTCTACTGCAGCATTCATGTGTAGCGGGGAAGCCTACGTAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CCA 72 bp | CTTCATTCTACAAATCTGCTGAGAAATAAAACCTTCTaGGTAACTGTCGTGCGTTTTCCAATGACTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHSTNLLRNKTF*VTVVRFPMTVW Trigger: CCAAACAGTCATTGGAAAACGCACGACAGTTACCCAGAAGGTTTTATTTCTCAGCAGATTTGTAGAATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR GCA 72 bp | CAAGCAAATACATTCACTGACCTCTGCCCTACATACTaGATAAACTTCTACATGTTTATTCCTAAGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QANTFTDLCPTY*INFYMFIPKHQ Trigger: TTGGTGCTTAGGAATAAACATGTAGAAGTTTATGCAGTATGTAGGGCAGAGGTCAGTGAATGTATTTGCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CCA 72 bp | AGCTATCAAATTCTTCATCCAACTCTGAAAGGATGTTaGAAGAATTTTCCTGAACTCCTTTCAGTGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SYQILHPTLKGC*KNFPELLSVCD Trigger: ATCACACACTGAAAGGAGTTCAGGAAAATTCTTCCAACATCCTTTCAGAGTTGGATGAAGAATTTGATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
||
| 3UTR CCA 72 bp | ATATACTGGCTTGAAAACAACAACTTGGTGGTGACATaGATACTGAGTAATTTCATGCTTACTTCTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: IYWLENNNLVVT*ILSNFMLTSDR Trigger: TCTGTCAGAAGTAAGCATGAAATTACTCAGTATCCATGTCACCACCAAGTTGTTGTTTTCAAGCCAGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR TCA 72 bp | ACACTGTTACGAGACACAAAACTAAACATACAAACATaGGGTAATGTCGCTGTGATGGTTTTCTGTAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLLRDTKLNIQT*GNVAVMVFCKK Trigger: TTTCTTACAGAAAACCATCACAGCGACATTACCTCATGTTTGTATGTTTAGTTTTGTGTCTCGTAACAGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR TCA 72 bp | TATAGAGTACAAGCTATCAAATTCTTCATCCAACTCTaGAAGGATGTTGGAAGAATTTTCCTGAACTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YRVQAIKFFIQL*KDVGRIFLNSF Trigger: AAAGGAGTTCAGGAAAATTCTTCCAACATCCTTTCAGAGTTGGATGAAGAATTTGATAGCTTGTACTCTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGCCTCTTACTGCTGGTaGCCTGGAGCCTACAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHASYCW*PGAYRR Trigger: ACGTCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGCTGCCTCTTACTGCTaGTGGCCTGGAGCCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHAASYC*WPGAYR Trigger: TCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGGCCTTTTCCTCCAGTaGGGTCCCATTCTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHGLFLQ*GPILHR Trigger: CCTGTGTAGAATGGGACCCCACTGGAGGAAAAGGCC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTTACTGCTGGTGGCCTaGAGCCTACAGACGTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHLLLVA*SLQTSV Trigger: AACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTAA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CAA 72 bp | CATTTGGGTCCCAGGGAACAAACTCAAGTCATCCAGTaGGCAGCAAGTGCTTTTCTTGTGAGCCATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLGPREQTQVIQ*AASAFLVSHLS Trigger: GCTGAGATGGCTCACAAGAAAAGCACTTGCTGCCAACTGGATGACTTGAGTTTGTTCCCTGGGACCCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCACCACACCACACCATaGAACCAGGTACTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHHHTTP*NQVLLA Trigger: AGCCAGTAGTACCTGGTTTCATGGTGTGGTGTGGTG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCGTCCGTTTTGGGGATaGAGTACCACTTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRPFWG*STTSAL Trigger: AAGGGCAGAAGTGGTACTCCATCCCCAAAACGGACG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGTTCAGGCTGCTAGTTaGACCAGTCATTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHVQAAS*TSHSVF Trigger: GAAAACGGAATGACTGGTTCAACTAGCAGCCTGAAC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTACAGACGTCCGTTTTaGGGATGGAGTACCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHYRRPF*GWSTTS Trigger: AGAAGTGGTACTCCATCCCCAAAACGGACGTCTGTA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CAA 72 bp | AAAGACAACTTGCAGGAGATAAGTCTCCCCTTCCATTaGGGTCCCAGGGAACAAACTCAAGTCATCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDNLQEISLPFH*GPREQTQVIQL Trigger: CAACTGGATGACTTGAGTTTGTTCCCTGGGACCCAAATGGAAGGGGAGACTTATCTCCTGCAAGTTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCTGTCTGGCAGCCTTTaGAAATTCTTCCGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHLSGSL*KFFRFF Trigger: AAAGAACCGGAAGAATTTTCAAAGGCTGCCAGACAG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAGAAAGACGAAAGGCTaGAGCCATTGTGACTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHRKTKG*SHCDSI Trigger: GATAGAGTCACAATGGCTTCAGCCTTTCGTCTTTCT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAGCATCTGCCTTTCCTaGGAGAAGTCCACCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHSICLS*EKSTIK Trigger: TTTAATGGTGGACTTCTCTCAGGAAAGGCAGATGCT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAACCAGCTGTTGACGTaGACGCACCAACTAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHNQLLT*THQLVF Trigger: AAATACTAGTTGGTGCGTTCACGTCAACAGCTGGTT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCTCATCCTTAACACGTaGGAGTCCATCAAAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHLILNT*ESIKVR Trigger: ACGAACTTTGATGGACTCCCACGTGTTAAGGATGAG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTGTTCTCACAGCACTTaGAACCTGCATTCCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHCSHST*NLHSST Trigger: AGTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCATTGTTACATTGACTaGGCTGACTCTGTAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHHCYID*ADSVTP Trigger: AGGAGTTACAGAGTCAGCTCAGTCAATGTAACAATG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGTGTGCATCATAAAATaGAAGCTGACCCCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHVCIIK*KLTPIK Trigger: TTTGATGGGGGTCAGCTTTCATTTTATGATGCACAC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCCAGGTACTACTGGCTaGGTAAATTTTGTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHPGTTG*VNFVLK Trigger: CTTCAAGACAAAATTTACTCAGCCAGTAGTACCTGG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCCGTTTTCACTTTTCTaGAGTGTTCTCACAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHPFSLF*SVLTAL Trigger: AAGTGCTGTGAGAACACTTCAGAAAAGTGAAAACGG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATACAGCACTTGGAACCTaGATTCCAGTACTCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHTALGT*IPVLKE Trigger: TTCTTTGAGTACTGGAATGCAGGTTCCAAGTGCTGT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTACCAAACACTCTACTaGGTCAATCTCTGGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHYQTLY*VNLWSF Trigger: AAAGCTCCAGAGATTGACCCAGTAGAGTGTTTGGTA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CAA 72 bp | CTTCTGGGTAACTGTCGTGCGTTTTCCAATGACTGTTaGGAAACTGTAGATGAAGGTCTCAATGATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGNCRAFSNDC*ETVDEGLNDGT Trigger: TGTCCCATCATTGAGACCTTCATCTACAGTTTCCAAACAGTCATTGGAAAACGCACGACAGTTACCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGGGTCATGTTGTCACTaGCTTTTGGTTTCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHGSCCH*LLVSKK Trigger: TTTCTTTGAAACCAAAAGTCAGTGACAACATGACCC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTGGAGCTTTTGGGACTaGCAAAAACTTCAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHWSFWD*QKLQSL Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCAAAAGCTCCA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAATCTCTGGAGCTTTTaGGACTGGCAAAAACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHNLWSF*DWQKLQ Trigger: TTGAAGTTTTTGCCAGTCCCAAAAGCTCCAGAGATT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTTCTTCATCCAACTCTaGAAGGATGTTGGAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHFFIQL*KDVGRI Trigger: AATTCTTCCAACATCCTTTCAGAGTTGGATGAAGAA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGACCTTGTTGCAAATTCTAGTAGTTCCTCAGAGTTCTCCAGGGCATTGTTTGCCAGAGTTGAAATaGTTCTTTGTAGAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMTLLQILVVPQSSPGHCLPELK*FFVELP Trigger: GGGAAGCTCTACAAAGAATCATTTCAACTCTGGCAA...ACAATGCCCTGGAGAACTCTGAGGAACTACTAGAATTTGCAACAAGGTCATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGAAACCAGGTACTACTaGCTGAGTAAATTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHETRYY*LSKFCL Trigger: AAGACAAAATTTACTCAGCCAGTAGTACCTGGTTTC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTTCACCTTATTATTATaGTTGGCTGCAAATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHFTLLL*LAANVF Trigger: GAACACATTTGCAGCCAAGCATAATAATAAGGTGAA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CAA 72 bp | CTCCTTCCTGTCTACTTCCAGCTAAATGAAACTGGTTaGGATTCAACTGCTAAGAGGGAAATACAATACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVYFQLNETG*DSTAKREIQYL Trigger: TAAGTATTGTATTTCCCTCTTAGCAGTTGAATCCAAACCAGTTTCATTTAGCTGGAAGTAGACAGGAAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| 3UTR CAA 72 bp | TTGATATTTATCAAGGGCATCAAATTGCTGACCCACTaGGTTGTTGGAAAAGTTAATTCAGCCACGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LIFIKGIKLLTH*VVGKVNSATFT Trigger: AGTGAACGTGGCTGAATTAACTTTTCCAACAACCAAGTGGGTCAGCAATTTGATGCCCTTGATAAATATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTCTCCAGCCACAGCTTaGTTGCATGCTCTCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHSPATA*LHALTR Trigger: CCGAGTGAGAGCATGCAACAAAGCTGTGGCTGGAGA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCCAGCCACAGCTTTGTaGCATGCTCTCACTCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHPATAL*HALTRK Trigger: TTTCCGAGTGAGAGCATGCAACAAAGCTGTGGCTGG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGTGTTCTCACAGCACTaGGAACCTGCATTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHVFSQH*EPAFQY Trigger: GTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACAC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
||
| CDS CCA 90 bp | ACCAGTCATTCCGTTTTCACTTTTCTGAAGTGTTCTCACAGCACTTaGAACCTGCATTCCAGTACTCAAAGAAAGTCCACCACACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TSHSVFTFLKCSHST*NLHSSTQRKSTTPH Trigger: GTGTGGTGTGGTGGACTTTCTTTGAGTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAACGGAATGACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATTCTGTCTGGCAGCCTTaGAAAATTCTTCCGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHSVWQP*KILPVL Trigger: AAGAACCGGAAGAATTTTCAAAGGCTGCCAGACAGA...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATATTGTGACTCTATCCTaGATCTGTCTGGCAGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHIVTLS*ICLAAF Trigger: AAAGGCTGCCAGACAGATCAAGGATAGAGTCACAAT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATCAATCTCTGGAGCTTTaGGGACTGGCAAAAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHQSLEL*GLAKTS Trigger: TGAAGTTTTTGCCAGTCCCAAAAGCTCCAGAGATTG...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGCTACAGTTACAGAGTaGTCAGCTACCAAACACTCT | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHATVTE*SATKHS Trigger: AGAGTGTTTGGTAGCTGACAACTCTGTAACTGTAGC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS TCA 90 bp | TTGTTCAGGCTGCTAGTTGAACCAGTCATTCCGTTTTCACTTTTCTaGAGTGTTCTCACAGCACTTGGAACCTGCATTCCAGTACTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LFRLLVEPVIPFSLF*SVLTALGTCIPVLK Trigger: TTTGAGTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAACGGAATGACTGGTTCAACTAGCAGCCTGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATGTATATTCAGTGCCCTaGATATTATCAATCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHVYSVP*ILSITS Trigger: GGAGGTGATTGATAATATCAAGGGCACTGAATATAC...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS GCA 90 bp | TCTCTAGGGTCACTGGGTCAGAGTAGTCTCCAGCCACAGCTTTGTTaGATGCTCTCACTCGGAAATTCATATACTTTGAATCAAATTTTA | + |
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Preference number: 5 (lower is better) Translates to: SLGSLGQSSLQPQLC*MLSLGNSYTLNQIL Trigger: TAAAATTTGATTCAAAGTATATGAATTTCCGAGTGAGAGCATGCAACAAAGCTGTGGCTGGAGACTACTCTGACCCAGTGACCCTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATATTAAATGGGTCATGTaGTCACTGACTTTTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHIKWVM*SLTFGF Trigger: GAAACCAAAAGTCAGTGACAACATGACCCATTTAAT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS-3UTR CAA 90 bp | CCCCTATATTTCCTTCATGGAAAGCAGCCATGTCCAAGCTGTGTAAGCAGACATAATACAGCAACTGCTTaGAGTGTGCATCATAAAATG | + |
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Preference number: 5 (lower is better) Translates to: PLYFLHGKQPCPSCVSRHNTATA*SVHHKM Trigger: CATTTTATGATGCACACTCAAAGCAGTTGCTGTATT...ATGTCTGCTTACACAGCTTGGACATGGCTGCTTTCCATGAAGGAAATATAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS CCA 90 bp | GTGGGGTCCCATTCTACACAGGAATCTTCAACTTTCAAATTCAAATaGGATGATGAGTTATCTAGACTGAAGTTAAGTGCTCTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VGSHSTQESSTFKFK*DDELSRLKLSALVS Trigger: AGAGACCAGAGCACTTAACTTCAGTCTAGATAACTCATCATCCCATTTGAATTTGAAAGTTGAAGATTCCTGTGTAGAATGGGACCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CCA 90 bp | CTTGATATTATCAATCACCTCCCAACATCGCTCATCCTTAACACGTaGGAGTCCATCAAAGTTCGTTTTCCTGTATTCCATTATGAAATG | + |
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Preference number: 5 (lower is better) Translates to: LDIINHLPTSLILNT*ESIKVRFPVFHYEM Trigger: CATTTCATAATGGAATACAGGAAAACGAACTTTGATGGACTCCCACGTGTTAAGGATGAGCGATGTTGGGAGGTGATTGATAATATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CCA 72 bp | TACTGCTGGTGGCCTGGAGCCTACAGACGTCCGTTTTaGGGATGGAGTACCACTGCCCTTGTTCTCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: YCWWPGAYRRPF*GWSTTALVLLP Trigger: GGGAAGGAGAACAAGGGCAGTGGTACTCCATCCCCAAAACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163067.9 |
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| CDS CAA 72 bp | TTACTGCTGGTGGCCTGGAGCCTACAGACGTCCGTTTaGGGGATGGAGTACCACTGCCCTTGTTCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLLVAWSLQTSV*GMEYHCPCSPS Trigger: GGAAGGAGAACAAGGGCAGTGGTACTCCATCCCCAAAACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163067.9 |
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| CDS CCA 72 bp | TACTGCTGGTGGCCTGGAGCCTACAGACGTCCGTTTTaGGGATGGAGTACCACTTCTGCCCTTGTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: YCWWPGAYRRPF*GWSTTSALVLL Trigger: AAGGAGAACAAGGGCAGAAGTGGTACTCCATCCCCAAAACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS CAA 72 bp | TTACTGCTGGTGGCCTGGAGCCTACAGACGTCCGTTTaGGGGATGGAGTACCACTTCTGCCCTTGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLVAWSLQTSV*GMEYHFCPCSP Trigger: AGGAGAACAAGGGCAGAAGTGGTACTCCATCCCCAAAACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132151.8 ENSMUST00000180164.2 |
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| CDS CAA 72 bp | TTACTGCTGGTGGCCTGGAGCCTACAGACGTCCGTTTaGGGGATGGAGTACCACTTGTGTGTTTCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLLVAWSLQTSV*GMEYHLCVSSV Trigger: CACTGAAGAAACACACAAGTGGTACTCCATCCCCAAAACGGACGTCTGTAGGCTCCAGGCCACCAGCAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159415.9 |
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| CDS TCA 72 bp | TCTGAATCTCATCACTCTTATTTGCCAGAGTTGAAATaGTTCTTTGTAGAGCTTCCCTCGGAGCACGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SESHHSYLPELK*FFVELPSEHAA Trigger: CGCGGCGTGCTCCGAGGGAAGCTCTACAAAGAATCATTTCAACTCTGGCAAATAAGAGTGATGAGATTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129648.3 |
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| CDS TCA 72 bp | TTTTGGGGATGGAGTACCACTTGTGTGTTTCTTCAGTaGAGTAACATGGACACTGCCCTTGTTCTCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FWGWSTTCVFLQ*SNMDTALVLLP Trigger: GGGAAGGAGAACAAGGGCAGTGTCCATGTTACTTCACTGAAGAAACACACAAGTGGTACTCCATCCCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159415.9 |
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| CDS CAA 90 bp | AACCAGTCATTCCGTTTTCACTTTTCTGAAGTGTTCTCACAGCACTaGGAACCTGCATTCCAGTACTCAAAGAAAGTCCACCACACCACA | + |
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Preference number: 6 (lower is better) Translates to: NQSFRFHFSEVFSQH*EPAFQYSKKVHHTT Trigger: TGTGGTGTGGTGGACTTTCTTTGAGTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAACGGAATGACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS GCA 72 bp | TCACTGGGTCAGAGTAGTCTCCAGCCACAGCTTTGTTaGATGCTCTCACTCGGAAATTCATATACTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLGQSSLQPQLC*MLSLGNSYTLN Trigger: ATTCAAAGTATATGAATTTCCGAGTGAGAGCATGCAACAAAGCTGTGGCTGGAGACTACTCTGACCCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CCA 72 bp | GTTGTCAGCTACCAAACACTCTACTGGGTCAATCTCTaGAGCTTTTGGGACTGGCAAAAACTTCAAAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VVSYQTLYWVNL*SFWDWQKLQSL Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCAAAAGCTCCAGAGATTGACCCAGTAGAGTGTTTGGTAGCTGACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CCA 72 bp | ATCAATCACCTCCCAACATCGCTCATCCTTAACACGTaGGAGTCCATCAAAGTTCGTTTTCCTGTATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: INHLPTSLILNT*ESIKVRFPVFH Trigger: ATGGAATACAGGAAAACGAACTTTGATGGACTCCCACGTGTTAAGGATGAGCGATGTTGGGAGGTGATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CCA 72 bp | TCCGTTTTCACTTTTCTGAAGTGTTCTCACAGCACTTaGAACCTGCATTCCAGTACTCAAAGAAAGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SVFTFLKCSHST*NLHSSTQRKST Trigger: GGTGGACTTTCTTTGAGTACTGGAATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CAA 72 bp | TCTTCTTCAGGCATTCTCCAAGCTACAGTTACAGAGTaGTCAGCTACCAAACACTCTACTGGGTCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSGILQATVTE*SATKHSTGSIS Trigger: AGAGATTGACCCAGTAGAGTGTTTGGTAGCTGACAACTCTGTAACTGTAGCTTGGAGAATGCCTGAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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| CDS CAA 90 bp | ATTTTATTATCTTCTTCAGGCATTCTCCAAGCTACAGTTACAGAGTaGTCAGCTACCAAACACTCTACTGGGTCAATCTCTGGAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ILLSSSGILQATVTE*SATKHSTGSISGAF Trigger: AAAAGCTCCAGAGATTGACCCAGTAGAGTGTTTGGTAGCTGACAACTCTGTAACTGTAGCTTGGAGAATGCCTGAAGAAGATAATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000132151.8 ENSMUST00000159415.9 ENSMUST00000163067.9 ENSMUST00000180164.2 |
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