Pregenerated sensors for FSCN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025380Ensembl transcript IDs: ENSMUST00000026445.3
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGCGGCCGTGTGGCTCTaGCTGCAGCACCCAGCGCCC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEAAVWL*LQHPAP Trigger: GGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGGAACAGCACGGCAGTaGCCTGCCCCGGGTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEGTARQ*PAPGQA Trigger: AGCCTGACCCGGGGCAGGGCACTGCCGTGCTGTTCC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCGGTTGGTGTCCAGCTaGTTGGAGCCCCGGCGGTGG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCERLVSS*LEPRRW Trigger: CCACCGCCGGGGCTCCAACCAGCTGGACACCAACCG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGCAGGTACTTGCCGCTaGGGGCTCGGATGGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEAGTCR*GLGWPD Trigger: GTCTGGCCATCCGAGCCCTCAGCGGCAAGTACCTGC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGCACGCAGGAGCCCTaGGGCTCCTCCACGCAGGTA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCESTQEP*GSSTQV Trigger: TACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCAGCGCCCATCAGGCTaGGGCAAGACCAGGAAGCGG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEQRPSG*GKTRKR Trigger: CCGCTTCCTGGTCTTGCCGCAGCCTGATGGGCGCTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGCAGGCCCCACAGGTaGCAGGTACCGGCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCESRPHR*QVPAVT Trigger: TGTGACGGCCGGTACCTGGCACCTGTGGGGCCTGCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTGGTGTCCAGCTGGTTaGAGCCCCGGCGGTGGCACA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEWCPAG*SPGGGT Trigger: TGTGCCACCGCCGGGGCTCCAACCAGCTGGACACCA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCAGTCACGGCCCGGCTaGTCCATCTCACAGGCCACA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEQSRPG*SISQAT Trigger: TGTGGCCTGTGAGATGGATCAGCCGGGCCGTGACTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGGCCGTCACAGTCCTTaGAGGCCAGCTTGCCTGCCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEGRHSP*RPACLP Trigger: AGGCAGGCAAGCTGGCCTTCAAGGACTGTGACGGCC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGAATGCCCCCATGGGTaGCCAAGGTCCAGTAGCCCC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEECPHG*PRSSSP Trigger: GGGGCTACTGGACCTTGGTCACCCATGGGGGCATTC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTGTGTGGCTGTGGCCTaGATGCCCCCATGGGTGACC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCECVAVA*MPPWVT Trigger: GGTCACCCATGGGGGCATTCAGGCCACAGCCACACA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCCGTGTGGCTCTGACTaGAGCACCCAGCGCCCATCA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEPCGSD*STQRPS Trigger: TGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCACAGTCCACAGCTCTaGCGGGGAAATGGCCGTGGC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEHSPQL*RGNGRG Trigger: GCCACGGCCATTTCCCCGGCAGAGCTGTGGACTGTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGGGTGGATGGCCAGGTaGACAGTCCACAGCTCTGCC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEGWMAR*TVHSSA Trigger: GGCAGAGCTGTGGACTGTGCACCTGGCCATCCACCC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGATCTGCTTCCTCTTaGGGCTGGCTGCGGAGGCGT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCERSASS*GWLRRR Trigger: ACGCCTCCGCAGCCAGCCTCAAGAGGAAGCAGATCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCCAGCTTGCCTGCCTTaGACTCCAGCGTGTAGCAGG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEPACLP*TPACSR Trigger: CCTGCTACACGCTGGAGTTCAAGGCAGGCAAGCTGG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCAAGGCGGCCATCGCTaGGAAGGTAGCGGCTGTCAT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEQGGHR*EGSGCH Trigger: ATGACAGCCGCTACCTTCGCAGCGATGGCCGCCTTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGTTGCTGGCTTTAAGTaGCACCCGCCGGCCATGCCA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEVAGFK*HPPAMP Trigger: TGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAAC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCCGGGGAAATGGCCGTaGCAAAGCAGGACAGTCGGT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEPGKWP*QSRTVG Trigger: ACCGACTGTCCTGCTTTGCCACGGCCATTTCCCCGG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGAGCCTGTGGGTGGATaGCCAGGTGCACAGTCCACA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEEPVGG*PGAQST Trigger: TGTGGACTGTGCACCTGGCCATCCACCCACAGGCTC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGAAGCCAAAGCTCTCTaGAGTCAGGTAGCGGTCGGC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEEAKAL*SQVAVG Trigger: GCCGACCGCTACCTGACTGCAGAGAGCTTTGGCTTC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCCTCTTGAGGCTGGCTaGGGAGGCGTTGACCTTGAA | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEPLEAG*GGVDLE Trigger: TTCAAGGTCAACGCCTCCGCAGCCAGCCTCAAGAGG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGATGTAGCGCCGGTTaGCAGCTACCAGCACCACCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCERCSAG*QLPAPP Trigger: AGGTGGTGCTGGTAGCTGCCAACCGGCGCTACATCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGACTTGTGTGGCTGTaGCCTGAATGCCCCCATGGG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCERLVWL*PECPHG Trigger: CCCATGGGGGCATTCAGGCCACAGCCACACAAGTCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGATAGGCGCCATCCCTaGAGCTCAAGTGGAAGACGT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEDRRHP*SSSGRR Trigger: ACGTCTTCCACTTGAGCTTCAGGGATGGCGCCTATC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTCCAGGACCCAGATCTaGTTCCTCTTGAGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCESRTQI*FLLRLA Trigger: AGCCAGCCTCAAGAGGAAGCAGATCTGGGTCCTGGA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCTGATGGCGGCCAGCTaGCCGTTTTTCTTCATGCAC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCELMAAS*PFFFMH Trigger: GTGCATGAAGAAAAACGGGCAGCTGGCCGCCATCAG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGACACGCTTCCATGGCTaGCTGTGTACCAGAACCCAC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCETRFHG*LCTRTH Trigger: GTGGGTTCTGGTACACAGGCAGCCATGGAAGCGTGT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTGGATCTTCAGCACCTaGTGCAGACCGTTGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEWIFST*CRPLVG Trigger: GCCAACCAACGGTCTGCACCAGGTGCTGAAGATCCA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTACCAGCACCACCTGTaGGTGACTTTGCTCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEYQHHL*VTLLQV Trigger: GACCTGGAGCAAAGTCACCCACAGGTGGTGCTGGTA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCGTAAGTGGAACGGTTaGTGTCCAGCTGGTTGGAGC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCERKWNG*CPAGWS Trigger: GCTCCAACCAGCTGGACACCAACCGTTCCACTTACG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCTGCACACGCTTCCATaGCTGCCTGTGTACCAGAAC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCELHTLP*LPVYQN Trigger: GTTCTGGTACACAGGCAGCCATGGAAGCGTGTGCAG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGGAAGACGTCGTAAGTaGAACGGTTGGTGTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEGRRRK*NGWCPA Trigger: AGCTGGACACCAACCGTTCCACTTACGACGTCTTCC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCATGTCACCGTCTGCTaGCATCTCATCTTCCTGAAG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEHVTVC*HLIFLK Trigger: CTTCAGGAAGATGAGATGGCAGCAGACGGTGACATG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCAGTACCGCCTGCTCTaGAAAATGAGGGTGACTAGT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEQYRLL*KMRVTS Trigger: ACTAGTCACCCTCATTTTCCAGAGCAGGCGGTACTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR GCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTCCAGTAGCCCCCAGTaGTGGAATAGAAAGTACACT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCESSSPQ*WNRKYT Trigger: AGTGTACTTTCTATTCCAGCACTGGGGGCTACTGGA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTTAACAAGGCCAAACTaGATCTTCAGCACCTGGTGC | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCELTRPN*IFSTWC Trigger: GCACCAGGTGCTGAAGATCCAGTTTGGCCTTGTTAA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTTCATCCTGATTGGCTaGGACATTGATTCCTTGCCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEFILIG*DIDSLP Trigger: AGGCAAGGAATCAATGTCTCAGCCAATCAGGATGAA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR TCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCCCAGTTCTTCATCCTaGTTGGCTGAGACATTGATT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEPSSSS*LAETLI Trigger: AATCAATGTCTCAGCCAATCAGGATGAAGAACTGGG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGTAGCCCCCAGTGCTaGAATAGAAAGTACACTTCT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCESSPQC*NRKYTS Trigger: AGAAGTGTACTTTCTATTCCAGCACTGGGGGCTACT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTTTCAAACATGGTGTTaGCAGAGACTTGTGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEFQTWC*QRLVWL Trigger: CAGCCACACAAGTCTCTGCCAACACCATGTTTGAAA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CCA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCACTTCTTTGTCTCCTaGTCGATTTGCATCAGGAAT | + |
Preference number: 4 (lower is better) Translates to: RNKGLMLGRWALGLTPCEHFFVS*SICIRN Trigger: ATTCCTGATGCAAATCGACCAGGAGACAAAGAAGTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | GAGAGCTTCCCCCACAGGCAGGTCTGCATCAGCACGCAGGAGCCCTaGGGCTCCTCCACGCAGGTACTTGCCGCTGAGGGCTCGGATGGC | + |
Preference number: 5 (lower is better) Translates to: ESFPHRQVCISTQEP*GSSTQVLAAEGSDG Trigger: GCCATCCGAGCCCTCAGCGGCAAGTACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGCTGATGCAGACCTGCCTGTGGGGGAAGCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | CAGCACGCAGGAGCCCTGAGGCTCCTCCACGCAGGTACTTGCCGCTaGGGGCTCGGATGGCCAGACGGCCACGCTCTCGGAACTCAAAGA | + |
Preference number: 5 (lower is better) Translates to: QHAGALRLLHAGTCR*GLGWPDGHALGTQR Trigger: TCTTTGAGTTCCGAGAGCGTGGCCGTCTGGCCATCCGAGCCCTCAGCGGCAAGTACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | AGCACGGCAGTGCCCTGCCCCGGGTCAGGCTCCAGGACCCAGATCTaGTTCCTCTTGAGGCTGGCTGCGGAGGCGTTGACCTTGAAGCCA | + |
Preference number: 5 (lower is better) Translates to: STAVPCPGSGSRTQI*FLLRLAAEALTLKP Trigger: TGGCTTCAAGGTCAACGCCTCCGCAGCCAGCCTCAAGAGGAAGCAGATCTGGGTCCTGGAGCCTGACCCGGGGCAGGGCACTGCCGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | AGTCGGTCCTCAATGCCACCGAAGAAGCGGCCGTGTGGCTCTGACTaGAGCACCCAGCGCCCATCAGGCTGCGGCAAGACCAGGAAGCGG | + |
Preference number: 5 (lower is better) Translates to: SRSSMPPKKRPCGSD*STQRPSGCGKTRKR Trigger: CCGCTTCCTGGTCTTGCCGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGCTTCTTCGGTGGCATTGAGGACCGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | GGACAGTCGGTCCTCAATGCCACCGAAGAAGCGGCCGTGTGGCTCTaGCTGCAGCACCCAGCGCCCATCAGGCTGCGGCAAGACCAGGAA | + |
Preference number: 5 (lower is better) Translates to: GQSVLNATEEAAVWL*LQHPAPIRLRQDQE Trigger: TTCCTGGTCTTGCCGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGCTTCTTCGGTGGCATTGAGGACCGACTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | GGTCGAAGAGTTCATCCTTGCTGGGCCTCGTGTTGCGACCAGCCTTaGGTGTGCCAGCAGGCCCCACAGGTGCCAGGTACCGGCCGTCAC | + |
Preference number: 5 (lower is better) Translates to: GRRVHPCWASCCDQP*VCQQAPQVPGTGRH Trigger: GTGACGGCCGGTACCTGGCACCTGTGGGGCCTGCTGGCACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAAGGATGAACTCTTCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 90 bp | CGTAGCGCCGACGGCTCACACTCAGCAAATGAGCCTGTGGGTGGATaGCCAGGTGCACAGTCCACAGCTCTGCCGGGGAAATGGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: RSADGSHSANEPVGG*PGAQSTALPGKWPW Trigger: CCACGGCCATTTCCCCGGCAGAGCTGTGGACTGTGCACCTGGCCATCCACCCACAGGCTCATTTGCTGAGTGTGAGCCGTCGGCGCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | CCACACGTCCATCTTCTTCTGCTGACAGGTAGCGGCCTAGGTGACTaGTTCGGAACAGCACGGCAGTGCCCTGCCCCGGGTCAGGCTCCA | + |
Preference number: 5 (lower is better) Translates to: PHVHLLLLTGSGLGD*FGTARQCPAPGQAP Trigger: TGGAGCCTGACCCGGGGCAGGGCACTGCCGTGCTGTTCCGAAGCAGTCACCTAGGCCGCTACCTGTCAGCAGAAGAAGATGGACGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTTGGTGTCCAGCTGGTaGGAGCCCCGGCGGTGGCAC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCELVSSW*EPRRWH Trigger: GTGCCACCGCCGGGGCTCCAACCAGCTGGACACCAA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | CCATCAGGCTGCGGCAAGACCAGGAAGCGGCAGTCACGGCCCGGCTaGTCCATCTCACAGGCCACACGTCCATCTTCTTCTGCTGACAGG | + |
Preference number: 5 (lower is better) Translates to: PSGCGKTRKRQSRPG*SISQATRPSSSADR Trigger: CCTGTCAGCAGAAGAAGATGGACGTGTGGCCTGTGAGATGGATCAGCCGGGCCGTGACTGCCGCTTCCTGGTCTTGCCGCAGCCTGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 90 bp | CAGGTGCACGTAGCGCCGACGGCTCACACTCAGCAAATGAGCCTGTaGGTGGATGGCCAGGTGCACAGTCCACAGCTCTGCCGGGGAAAT | + |
Preference number: 5 (lower is better) Translates to: QVHVAPTAHTQQMSL*VDGQVHSPQLCRGN Trigger: ATTTCCCCGGCAGAGCTGTGGACTGTGCACCTGGCCATCCACCCACAGGCTCATTTGCTGAGTGTGAGCCGTCGGCGCTACGTGCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCGGCCGTCACAGTCCTaGAAGGCCAGCTTGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCERPSQS*KASLPA Trigger: GGCAGGCAAGCTGGCCTTCAAGGACTGTGACGGCCG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGTGTTGCGACCAGCCTaGAGTGTGCCAGCAGGCCCC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCEVLRPA*SVPAGP Trigger: GGGGCCTGCTGGCACACTCAAGGCTGGTCGCAACAC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCTGGCTGCGGAGGCGTaGACCTTGAAGCCAAAGCTC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCELAAEA*TLKPKL Trigger: GAGCTTTGGCTTCAAGGTCAACGCCTCCGCAGCCAG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTTGCTGGGCCTCGTGTaGCGACCAGCCTTGAGTGTG | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCELLGLV*RPALSV Trigger: CACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGTCCTTGAAGGCCAGCTaGCCTGCCTTGAACTCCAGC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCESLKAS*PALNSS Trigger: GCTGGAGTTCAAGGCAGGCAAGCTGGCCTTCAAGGA...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | GCTCTCGGAACTCAAAGAGGAAATCTTCCGCCAAGTCACCGTCGCTaGACACGCTTCCATGGCTGCCTGTGTACCAGAACCCACCTCCAC | + |
Preference number: 5 (lower is better) Translates to: ALGTQRGNLPPSHRR*TRFHGCLCTRTHLH Trigger: GTGGAGGTGGGTTCTGGTACACAGGCAGCCATGGAAGCGTGTGCAGCGACGGTGACTTGGCGGAAGATTTCCTCTTTGAGTTCCGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGCACCTGTGGGTGACTTaGCTCCAGGTCGAAGAGTTC | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCEHLWVT*LQVEEF Trigger: GAACTCTTCGACCTGGAGCAAAGTCACCCACAGGTG...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGGGTGTTGGCAGAGACTaGTGTGGCTGTGGCCTGAAT | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCEGVGRD*CGCGLN Trigger: ATTCAGGCCACAGCCACACAAGTCTCTGCCAACACC...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | CTTGAGGCTGGCTGCGGAGGCGTTGACCTTGAAGCCAAAGCTCTCTaGAGTCAGGTAGCGGTCGGCATCGTTAACAAGGCCAAACTGGAT | + |
Preference number: 5 (lower is better) Translates to: LEAGCGGVDLEAKAL*SQVAVGIVNKAKLD Trigger: ATCCAGTTTGGCCTTGTTAACGATGCCGACCGCTACCTGACTGCAGAGAGCTTTGGCTTCAAGGTCAACGCCTCCGCAGCCAGCCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | TGTTGGCAGAGACTTGTGTGGCTGTGGCCTGAATGCCCCCATGGGTaGCCAAGGTCCAGTAGCCCCCAGTGCTGGAATAGAAAGTACACT | + |
Preference number: 5 (lower is better) Translates to: CWQRLVWLWPECPHG*PRSSSPQCWNRKYT Trigger: AGTGTACTTTCTATTCCAGCACTGGGGGCTACTGGACCTTGGTCACCCATGGGGGCATTCAGGCCACAGCCACACAAGTCTCTGCCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGACCAGGAGGGGTCGATaGATGAGCTTGAGGGTAAAT | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCETRRGR*MSLRVN Trigger: ATTTACCCTCAAGCTCATCAATCGACCCCTCCTGGT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | GTAAATAGCTCGTCCTCGCCCACAAAGTCGCTGATGGCGGCCAGCTaGCCGTTTTTCTTCATGCACACAAAACGCCCGTTGCTGGCTTTA | + |
Preference number: 5 (lower is better) Translates to: VNSSSSPTKSLMAAS*PFFFMHTKRPLLAL Trigger: TAAAGCCAGCAACGGGCGTTTTGTGTGCATGAAGAAAAACGGGCAGCTGGCCGCCATCAGCGACTTTGTGGGCGAGGACGAGCTATTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | CACACAAAACGCCCGTTGCTGGCTTTAAGTGCCACCCGCCGGCCATaGCATTCTATTTCAAACATGGTGTTGGCAGAGACTTGTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: HTKRPLLALSATRRP*HSISNMVLAETCVA Trigger: AGCCACACAAGTCTCTGCCAACACCATGTTTGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCGTTTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGATTTCAAACATGGTGTaGGCAGAGACTTGTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCEISNMV*AETCVA Trigger: AGCCACACAAGTCTCTGCCAACACCATGTTTGAAAT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 90 bp | CCCGTTTTTCTTCATGCACACAAAACGCCCGTTGCTGGCTTTAAGTaGCACCCGCCGGCCATGCCATTCTATTTCAAACATGGTGTTGGC | + |
Preference number: 5 (lower is better) Translates to: PVFLHAHKTPVAGFK*HPPAMPFYFKHGVG Trigger: GCCAACACCATGTTTGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCGTTTTGTGTGCATGAAGAAAAACGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS-3UTR CAA 90 bp | CGCAACAAAGGTTTAATGCTGGGTCGGTGGGCTCTGGGGTTGACCCCCTGTGAGAGAAAGTACACTTCTTaGTCTCCTGGTCGATTTGCA | + |
Preference number: 5 (lower is better) Translates to: RNKGLMLGRWALGLTPCERKYTS*SPGRFA Trigger: TGCAAATCGACCAGGAGACAAAGAAGTGTACTTTCT...CTCACAGGGGGTCAACCCCAGAGCCCACCGACCCAGCATTAAACCTTTGTTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | GGAATGTCTCATGACCCAGTTCTTCATCCTGATTGGCTGAGACATTaGTTCCTTGCCTCACAGAGATGTAGCGCCGGTTGGCAGCTACCA | + |
Preference number: 5 (lower is better) Translates to: GMSHDPVLHPDWLRH*FLASQRCSAGWQLP Trigger: TGGTAGCTGCCAACCGGCGCTACATCTCTGTGAGGCAAGGAATCAATGTCTCAGCCAATCAGGATGAAGAACTGGGTCATGAGACATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 90 bp | TTGCATCAGGAATGTCTCATGACCCAGTTCTTCATCCTGATTGGCTaGGACATTGATTCCTTGCCTCACAGAGATGTAGCGCCGGTTGGC | + |
Preference number: 5 (lower is better) Translates to: LHQECLMTQFFILIG*DIDSLPHRDVAPVG Trigger: GCCAACCGGCGCTACATCTCTGTGAGGCAAGGAATCAATGTCTCAGCCAATCAGGATGAAGAACTGGGTCATGAGACATTCCTGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | GCACGCAGGAGCCCTGAGGCTCCTCCACGCAGGTACTaGCCGCTGAGGGCTCGGATGGCCAGACGGCCACGC | + |
Preference number: 6 (lower is better) Translates to: ARRSPEAPPRRY*PLRARMARRPR Trigger: GCGTGGCCGTCTGGCCATCCGAGCCCTCAGCGGCAAGTACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 72 bp | GGAGCCCTGAGGCTCCTCCACGCAGGTACTTGCCGCTaGGGGCTCGGATGGCCAGACGGCCACGCTCTCGGA | + |
Preference number: 6 (lower is better) Translates to: GALRLLHAGTCR*GLGWPDGHALG Trigger: TCCGAGAGCGTGGCCGTCTGGCCATCCGAGCCCTCAGCGGCAAGTACCTGCGTGGAGGAGCCTCAGGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | TGTGGCTCTGACTGCAGCACCCAGCGCCCATCAGGCTaGGGCAAGACCAGGAAGCGGCAGTCACGGCCCGGC | + |
Preference number: 6 (lower is better) Translates to: CGSDCSTQRPSG*GKTRKRQSRPG Trigger: GCCGGGCCGTGACTGCCGCTTCCTGGTCTTGCCGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | TCTGCATCAGCACGCAGGAGCCCTGAGGCTCCTCCACGCAGGTACTaGCCGCTGAGGGCTCGGATGGCCAGACGGCCACGCTCTCGGAAC | + |
Preference number: 6 (lower is better) Translates to: SASARRSPEAPPRRY*PLRARMARRPRSRN Trigger: GTTCCGAGAGCGTGGCCGTCTGGCCATCCGAGCCCTCAGCGGCAAGTACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGCTGATGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | AGCGGCCTAGGTGACTGCTTCGGAACAGCACGGCAGTaGCCTGCCCCGGGTCAGGCTCCAGGACCCAGATCT | + |
Preference number: 6 (lower is better) Translates to: SGLGDCFGTARQ*PAPGQAPGPRS Trigger: AGATCTGGGTCCTGGAGCCTGACCCGGGGCAGGGCACTGCCGTGCTGTTCCGAAGCAGTCACCTAGGCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 72 bp | GAACGGTTGGTGTCCAGCTGGTTGGAGCCCCGGCGGTaGCACACAAAGCCATCCAGGCCACGCAGCACCAGG | + |
Preference number: 6 (lower is better) Translates to: ERLVSSWLEPRR*HTKPSRPRSTR Trigger: CCTGGTGCTGCGTGGCCTGGATGGCTTTGTGTGCCACCGCCGGGGCTCCAACCAGCTGGACACCAACCGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 72 bp | GTCCTCAATGCCACCGAAGAAGCGGCCGTGTGGCTCTaGCTGCAGCACCCAGCGCCCATCAGGCTGCGGCAA | + |
Preference number: 6 (lower is better) Translates to: VLNATEEAAVWL*LQHPAPIRLRQ Trigger: TTGCCGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGCTTCTTCGGTGGCATTGAGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | TCAATGCCACCGAAGAAGCGGCCGTGTGGCTCTGACTaGAGCACCCAGCGCCCATCAGGCTGCGGCAAGACC | + |
Preference number: 6 (lower is better) Translates to: SMPPKKRPCGSD*STQRPSGCGKT Trigger: GGTCTTGCCGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGCTTCTTCGGTGGCATTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | AGGTCGAAGAGTTCATCCTTGCTGGGCCTCGTGTTGCGACCAGCCTaGAGTGTGCCAGCAGGCCCCACAGGTGCCAGGTACCGGCCGTCA | + |
Preference number: 6 (lower is better) Translates to: RSKSSSLLGLVLRPA*SVPAGPTGARYRPS Trigger: TGACGGCCGGTACCTGGCACCTGTGGGGCCTGCTGGCACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAAGGATGAACTCTTCGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | CATCTTCTTCTGCTGACAGGTAGCGGCCTAGGTGACTaGTTCGGAACAGCACGGCAGTGCCCTGCCCCGGGT | + |
Preference number: 6 (lower is better) Translates to: HLLLLTGSGLGD*FGTARQCPAPG Trigger: ACCCGGGGCAGGGCACTGCCGTGCTGTTCCGAAGCAGTCACCTAGGCCGCTACCTGTCAGCAGAAGAAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 72 bp | GTAGCGCCGACGGCTCACACTCAGCAAATGAGCCTGTaGGTGGATGGCCAGGTGCACAGTCCACAGCTCTGC | + |
Preference number: 6 (lower is better) Translates to: VAPTAHTQQMSL*VDGQVHSPQLC Trigger: GCAGAGCTGTGGACTGTGCACCTGGCCATCCACCCACAGGCTCATTTGCTGAGTGTGAGCCGTCGGCGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 72 bp | AGACGTCGTAAGTGGAACGGTTGGTGTCCAGCTGGTTaGAGCCCCGGCGGTGGCACACAAAGCCATCCAGGC | + |
Preference number: 6 (lower is better) Translates to: RRRKWNGWCPAG*SPGGGTQSHPG Trigger: GCCTGGATGGCTTTGTGTGCCACCGCCGGGGCTCCAACCAGCTGGACACCAACCGTTCCACTTACGACGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 72 bp | TCTTCCGCCAAGTCACCGTCGCTGCACACGCTTCCATaGCTGCCTGTGTACCAGAACCCACCTCCACGGCCT | + |
Preference number: 6 (lower is better) Translates to: SSAKSPSLHTLP*LPVYQNPPPRP Trigger: AGGCCGTGGAGGTGGGTTCTGGTACACAGGCAGCCATGGAAGCGTGTGCAGCGACGGTGACTTGGCGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | AGTTCATCCTTGCTGGGCCTCGTGTTGCGACCAGCCTaGAGTGTGCCAGCAGGCCCCACAGGTGCCAGGTAC | + |
Preference number: 6 (lower is better) Translates to: SSSLLGLVLRPA*SVPAGPTGARY Trigger: GTACCTGGCACCTGTGGGGCCTGCTGGCACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAAGGATGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 72 bp | TGCGGCAAGACCAGGAAGCGGCAGTCACGGCCCGGCTaGTCCATCTCACAGGCCACACGTCCATCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: CGKTRKRQSRPG*SISQATRPSSS Trigger: AGAAGAAGATGGACGTGTGGCCTGTGAGATGGATCAGCCGGGCCGTGACTGCCGCTTCCTGGTCTTGCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CCA 72 bp | GACGGCTCACACTCAGCAAATGAGCCTGTGGGTGGATaGCCAGGTGCACAGTCCACAGCTCTGCCGGGGAAA | + |
Preference number: 6 (lower is better) Translates to: DGSHSANEPVGG*PGAQSTALPGK Trigger: TTTCCCCGGCAGAGCTGTGGACTGTGCACCTGGCCATCCACCCACAGGCTCATTTGCTGAGTGTGAGCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | TCCAGGTCGAAGAGTTCATCCTTGCTGGGCCTCGTGTaGCGACCAGCCTTGAGTGTGCCAGCAGGCCCCACA | + |
Preference number: 6 (lower is better) Translates to: SRSKSSSLLGLV*RPALSVPAGPT Trigger: TGTGGGGCCTGCTGGCACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAAGGATGAACTCTTCGACCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | GATGTAGCGCCGGTTGGCAGCTACCAGCACCACCTGTGGGTGACTTaGCTCCAGGTCGAAGAGTTCATCCTTGCTGGGCCTCGTGTTGCG | + |
Preference number: 6 (lower is better) Translates to: DVAPVGSYQHHLWVT*LQVEEFILAGPRVA Trigger: CGCAACACGAGGCCCAGCAAGGATGAACTCTTCGACCTGGAGCAAAGTCACCCACAGGTGGTGCTGGTAGCTGCCAACCGGCGCTACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | CCGGTTGGCAGCTACCAGCACCACCTGTGGGTGACTTaGCTCCAGGTCGAAGAGTTCATCCTTGCTGGGCCT | + |
Preference number: 6 (lower is better) Translates to: PVGSYQHHLWVT*LQVEEFILAGP Trigger: AGGCCCAGCAAGGATGAACTCTTCGACCTGGAGCAAAGTCACCCACAGGTGGTGCTGGTAGCTGCCAACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | AAGCCATCCAGGCCACGCAGCACCAGGAGGGGTCGATaGATGAGCTTGAGGGTAAATAGCTCGTCCTCGCCC | + |
Preference number: 6 (lower is better) Translates to: KPSRPRSTRRGR*MSLRVNSSSSP Trigger: GGGCGAGGACGAGCTATTTACCCTCAAGCTCATCAATCGACCCCTCCTGGTGCTGCGTGGCCTGGATGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | AAGCCATCCAGGCCACGCAGCACCAGGAGGGGTCGATTGATGAGCTaGAGGGTAAATAGCTCGTCCTCGCCCACAAAGTCGCTGATGGCG | + |
Preference number: 6 (lower is better) Translates to: KPSRPRSTRRGRLMS*RVNSSSSPTKSLMA Trigger: CGCCATCAGCGACTTTGTGGGCGAGGACGAGCTATTTACCCTCAAGCTCATCAATCGACCCCTCCTGGTGCTGCGTGGCCTGGATGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | TGGCACACAAAGCCATCCAGGCCACGCAGCACCAGGAGGGGTCGATaGATGAGCTTGAGGGTAAATAGCTCGTCCTCGCCCACAAAGTCG | + |
Preference number: 6 (lower is better) Translates to: WHTKPSRPRSTRRGR*MSLRVNSSSSPTKS Trigger: CGACTTTGTGGGCGAGGACGAGCTATTTACCCTCAAGCTCATCAATCGACCCCTCCTGGTGCTGCGTGGCCTGGATGGCTTTGTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 72 bp | AGACTTGTGTGGCTGTGGCCTGAATGCCCCCATGGGTaGCCAAGGTCCAGTAGCCCCCAGTGCTGGAATAGA | + |
Preference number: 6 (lower is better) Translates to: RLVWLWPECPHG*PRSSSPQCWNR Trigger: TCTATTCCAGCACTGGGGGCTACTGGACCTTGGTCACCCATGGGGGCATTCAGGCCACAGCCACACAAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | TCGTCCTCGCCCACAAAGTCGCTGATGGCGGCCAGCTaGCCGTTTTTCTTCATGCACACAAAACGCCCGTTG | + |
Preference number: 6 (lower is better) Translates to: SSSPTKSLMAAS*PFFFMHTKRPL Trigger: CAACGGGCGTTTTGTGTGCATGAAGAAAAACGGGCAGCTGGCCGCCATCAGCGACTTTGTGGGCGAGGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | AGCTGCCCGTTTTTCTTCATGCACACAAAACGCCCGTaGCTGGCTTTAAGTGCCACCCGCCGGCCATGCCAT | + |
Preference number: 6 (lower is better) Translates to: SCPFFFMHTKRP*LALSATRRPCH Trigger: ATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCGTTTTGTGTGCATGAAGAAAAACGGGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | ATGGCGGCCAGCTGCCCGTTTTTCTTCATGCACACAAAACGCCCGTaGCTGGCTTTAAGTGCCACCCGCCGGCCATGCCATTCTATTTCA | + |
Preference number: 6 (lower is better) Translates to: MAASCPFFFMHTKRP*LALSATRRPCHSIS Trigger: TGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCGTTTTGTGTGCATGAAGAAAAACGGGCAGCTGGCCGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | CGCCCGTTGCTGGCTTTAAGTGCCACCCGCCGGCCATaGCATTCTATTTCAAACATGGTGTTGGCAGAGACT | + |
Preference number: 6 (lower is better) Translates to: RPLLALSATRRP*HSISNMVLAET Trigger: AGTCTCTGCCAACACCATGTTTGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | ACTCAAAGAGGAAATCTTCCGCCAAGTCACCGTCGCTaGACACGCTTCCATGGCTGCCTGTGTACCAGAACC | + |
Preference number: 6 (lower is better) Translates to: TQRGNLPPSHRR*TRFHGCLCTRT Trigger: GGTTCTGGTACACAGGCAGCCATGGAAGCGTGTGCAGCGACGGTGACTTGGCGGAAGATTTCCTCTTTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS GCA 72 bp | CTTCATGCACACAAAACGCCCGTTGCTGGCTTTAAGTaGCACCCGCCGGCCATGCCATTCTATTTCAAACAT | + |
Preference number: 6 (lower is better) Translates to: LHAHKTPVAGFK*HPPAMPFYFKH Trigger: ATGTTTGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGGCGTTTTGTGTGCATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | CCAAGGTCCAGTAGCCCCCAGTGCTGGAATAGAAAGTACACTTCTTaGTCTCCTGGTCGATTTGCATCAGGAATGTCTCATGACCCAGTT | + |
Preference number: 6 (lower is better) Translates to: PRSSSPQCWNRKYTS*SPGRFASGMSHDPV Trigger: AACTGGGTCATGAGACATTCCTGATGCAAATCGACCAGGAGACAAAGAAGTGTACTTTCTATTCCAGCACTGGGGGCTACTGGACCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 90 bp | CCCAGTGCTGGAATAGAAAGTACACTTCTTTGTCTCCTGGTCGATTaGCATCAGGAATGTCTCATGACCCAGTTCTTCATCCTGATTGGC | + |
Preference number: 6 (lower is better) Translates to: PSAGIESTLLCLLVD*HQECLMTQFFILIG Trigger: GCCAATCAGGATGAAGAACTGGGTCATGAGACATTCCTGATGCAAATCGACCAGGAGACAAAGAAGTGTACTTTCTATTCCAGCACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS TCA 72 bp | GAATGTCTCATGACCCAGTTCTTCATCCTGATTGGCTaGGACATTGATTCCTTGCCTCACAGAGATGTAGCG | + |
Preference number: 6 (lower is better) Translates to: ECLMTQFFILIG*DIDSLPHRDVA Trigger: CGCTACATCTCTGTGAGGCAAGGAATCAATGTCTCAGCCAATCAGGATGAAGAACTGGGTCATGAGACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |
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CDS CAA 72 bp | AGTAGCCCCCAGTGCTGGAATAGAAAGTACACTTCTTaGTCTCCTGGTCGATTTGCATCAGGAATGTCTCAT | + |
Preference number: 6 (lower is better) Translates to: SSPQCWNRKYTS*SPGRFASGMSH Trigger: ATGAGACATTCCTGATGCAAATCGACCAGGAGACAAAGAAGTGTACTTTCTATTCCAGCACTGGGGGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026445.3 |