Pregenerated sensors for FSCN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029581Ensembl transcript IDs: ENSMUST00000031565.15, ENSMUST00000198017.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTaGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAGGAG | + |
Preference number: 1 (lower is better) Translates to: SGFLPPRSPEVSGKT*STNHRARAGVVRQE Trigger: CTCCTGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR GCA 90 bp | GGGAAAAGGAATGAGGTGGGTGAGAGGCCCGCCCCTTCCAGAATGTaGAGGAGCGACACGGAGTGCCACCTAGCTAGCTTTGAGTCAAAG | + |
Preference number: 1 (lower is better) Translates to: GKRNEVGERPAPSRM*RSDTECHLASFESK Trigger: CTTTGACTCAAAGCTAGCTAGGTGGCACTCCGTGTCGCTCCTGCACATTCTGGAAGGGGCGGGCCTCTCACCCACCTCATTCCTTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR GCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTaGCTTCCAGCCAAGATCCAGAAAAACACTTGTGGGCAAGGTTGG | + |
Preference number: 1 (lower is better) Translates to: FESKSQAQTLQDGTD*LPAKIQKNTCGQGW Trigger: CCAACCTTGCCCACAAGTGTTTTTCTGGATCTTGGCTGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGAGCCAGAGCTGGGGTaGTCAGGCAGGAGGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: PGLPGRGTSGFLPPRSPEEPELG*SGRREG Trigger: TCCCTCCCTCCTGCCTGACCACCCCAGCTCTGGCTC...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGGAAAAGGAATGAGGTaGGTGAGAGGCCCGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: PGLPGRGTSGFLPPRSPEGKGMR*VRGPPL Trigger: AAGGGGCGGGCCTCTCACCCACCTCATTCCTTTTCC...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | CACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGGAGCCAGAGCTGGGGTaGTCAGGCAGGAGGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: HIRLSPAQEPRGVWEDVEEPELG*SGRREG Trigger: TCCCTCCCTCCTGCCTGACCACCCCAGCTCTGGCTC...CTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCGAAAGGCAAGGGGTTTaGCACCTGCTGCAGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLERQGV*HLLQGH Trigger: GTGGCCCTGCAGCAGGTGGCAAACCCCTTGCCTTTC...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGCTCCTGGGGACAGTCTaGAGCCACCGACCCATGGGG | + |
Preference number: 2 (lower is better) Translates to: SPEVSGKTWSTNHRARAGLLGTV*SHRPMG Trigger: CCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAG...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCGCCCCTTCCAGAATGTaGAGGAGCGACACGGAGTGC | + |
Preference number: 2 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLAPSRM*RSDTEC Trigger: GCACTCCGTGTCGCTCCTGCACATTCTGGAAGGGGC...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAAGGGAGGGAACCCGCTaGGGAGGCAGGGACAGGAGC | + |
Preference number: 2 (lower is better) Translates to: VWEDVEHQSQSQSWGGQAREGTR*GGRDRS Trigger: GCTCCTGTCCCTGCCTCCCCAGCGGGTTCCCTCCCT...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCACTCCTGGGGACAGTCTaGAGCCACCGACCCATGGGG | + |
Preference number: 2 (lower is better) Translates to: VWEDVEHQSQSQSWGGQALLGTV*SHRPMG Trigger: CCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAG...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGATTTGGTCATTTTTCTaGTTCCAGTCAGGCCAGGGG | + |
Preference number: 2 (lower is better) Translates to: PGLPGRGTSGFLPPRSPEIWSFF*FQSGQG Trigger: CCCCTGGCCTGACTGGAAGCAGAAAAATGACCAAAT...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGCCCCTTCCAGAATGTaGAGGAGCGACACGGAGTGC | + |
Preference number: 2 (lower is better) Translates to: SPEVSGKTWSTNHRARAGAPSRM*RSDTEC Trigger: GCACTCCGTGTCGCTCCTGCACATTCTGGAAGGGGC...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCAAACCAGAGTCCCTCCTaGGGACAGTCTGCAGCCACC | + |
Preference number: 2 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSNQSPS*GQSAAT Trigger: GGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTT...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR TCA 90 bp | TGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCGGGGTCCACAGAGGGTaGCAGCAAGGGCACCGTTTT | + |
Preference number: 2 (lower is better) Translates to: CLGRRGAPITEPELGWSGGVHRG*QQGHRF Trigger: AAAACGGTGCCCTTGCTGTCACCCTCTGTGGACCCC...GCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | TGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCGAAAGGCAAGGGGTTTaGCACCTGCTGCAGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: CLGRRGAPITEPELGWSGERQGV*HLLQGH Trigger: GTGGCCCTGCAGCAGGTGGCAAACCCCTTGCCTTTC...GCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGGATGGGACAGACTaGCTTCCAGCCAAGATCCAG | + |
Preference number: 2 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSQDGTD*LPAKIQ Trigger: CTGGATCTTGGCTGGAAGGCAGTCTGTCCCATCCTG...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGCCAACAGGGCAGGCTTaGCTAGGGCCTTTCAACAGT | + |
Preference number: 2 (lower is better) Translates to: SPEVSGKTWSTNHRARAGPTGQA*LGPFNS Trigger: ACTGTTGAAAGGCCCTAGGCAAGCCTGCCCTGTTGG...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCATGCCAGAGTTCCCCATaGAAAGAAGGGGACAGAGGG | + |
Preference number: 2 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSCQSSP*KEGDRG Trigger: CCCTCTGTCCCCTTCTTTCCATGGGGAACTCTGGCA...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCAGTCCCGCCAAAAGGCTaGCCTCCAGAGGCTGGGGCC | + |
Preference number: 2 (lower is better) Translates to: FESKSQAQTLQDGTDCLPVPPKG*PPEAGA Trigger: GGCCCCAGCCTCTGGAGGCCAGCCTTTTGGCGGGAC...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGCCAAACACTGCAGGATaGGACAGACTGCCTTCCAGC | + |
Preference number: 2 (lower is better) Translates to: SPEVSGKTWSTNHRARAGPNTAG*DRLPSS Trigger: GCTGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGG...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | CACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGATTTGGTCATTTTTCTaGTTCCAGTCAGGCCAGGGG | + |
Preference number: 2 (lower is better) Translates to: HIRLSPAQEPRGVWEDVEIWSFF*FQSGQG Trigger: CCCCTGGCCTGACTGGAAGCAGAAAAATGACCAAAT...CTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR GCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCACCAACAGGGCAGGCTTaGCTAGGGCCTTTCAACAGT | + |
Preference number: 2 (lower is better) Translates to: VWEDVEHQSQSQSWGGQAPTGQA*LGPFNS Trigger: ACTGTTGAAAGGCCCTAGGCAAGCCTGCCCTGTTGG...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGCCAGAAAAACACTTGTaGGCAAGGTTGGCCATGCCC | + |
Preference number: 2 (lower is better) Translates to: SPEVSGKTWSTNHRARAGPEKHL*ARLAMP Trigger: GGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGG...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR CAA 90 bp | AGACTGCCTTCCAGCCAAGATCCAGAAAAACACTTGTGGGCAAGGTaGGCCATGCCCGGCTTCAGTCCCGCCAAAAGGCTGGCCTCCAGA | + |
Preference number: 2 (lower is better) Translates to: RLPSSQDPEKHLWAR*AMPGFSPAKRLASR Trigger: TCTGGAGGCCAGCCTTTTGGCGGGACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGGATCTTGGCTGGAAGGCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR TCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCAGGGGTCCACAGAGGGTaGCAGCAAGGGCACCGTTTT | + |
Preference number: 2 (lower is better) Translates to: FESKSQAQTLQDGTDCLPGVHRG*QQGHRF Trigger: AAAACGGTGCCCTTGCTGTCACCCTCTGTGGACCCC...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCACCAGAAAAACACTTGTaGGCAAGGTTGGCCATGCCC | + |
Preference number: 2 (lower is better) Translates to: FESKSQAQTLQDGTDCLPPEKHL*ARLAMP Trigger: GGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGG...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR CCA 72 bp | CTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTaGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTC | + |
Preference number: 3 (lower is better) Translates to: LPPRSPEVSGKT*STNHRARAGVV Trigger: GACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CAA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCACTTGTGGGCAAGGTaGGCCATGCCCGGCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLHLWAR*AMPGFS Trigger: ACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTG...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR GCA 72 bp | GGACAGAGGGAACCAGAGTCCCTCCTGGGGACAGTCTaGAGCCACCGACCCATGGGGAGCAGTGAGTTAGGG | + |
Preference number: 3 (lower is better) Translates to: GQREPESLLGTV*SHRPMGSSELG Trigger: CCCTAACTCACTGCTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTTCCCTCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR CCA 72 bp | ATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTaGGAAGACGTGGAGCACCAATCACAGAGCCAGAGC | + |
Preference number: 3 (lower is better) Translates to: IRLSPAQEPRGV*EDVEHQSQSQS Trigger: GCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR GCA 72 bp | AATGAGGTGGGTGAGAGGCCCGCCCCTTCCAGAATGTaGAGGAGCGACACGGAGTGCCACCTAGCTAGCTTT | + |
Preference number: 3 (lower is better) Translates to: NEVGERPAPSRM*RSDTECHLASF Trigger: AAAGCTAGCTAGGTGGCACTCCGTGTCGCTCCTGCACATTCTGGAAGGGGCGGGCCTCTCACCCACCTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR CCA 72 bp | AGACTGCCTTCCAGCCAAGATCCAGAAAAACACTTGTaGGCAAGGTTGGCCATGCCCGGCTTCAGTCCCGCC | + |
Preference number: 3 (lower is better) Translates to: RLPSSQDPEKHL*ARLAMPGFSPA Trigger: GGCGGGACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGGATCTTGGCTGGAAGGCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR-3UTR CAA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCACACTTGTGGGCAAGGTaGGCCATGCCCGGCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: FESKSQAQTLQDGTDCLPHLWAR*AMPGFS Trigger: ACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTG...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR GCA 72 bp | AAGATCCAGAAAAACACTTGTGGGCAAGGTTGGCCATaGCCGGCTTCAGTCCCGCCAAAAGGCTGGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: KIQKNTCGQGWP*PASVPPKGWPP Trigger: TGGAGGCCAGCCTTTTGGCGGGACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGGATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGCTAGTACTCCCAGAGTaGGGCGGGGTCGATAGTCTC | + |
Preference number: 4 (lower is better) Translates to: PGLPGRGTSGFLPPRSPELVLPE*GGVDSL Trigger: GAGACTATCGACCCCGCCTCACTCTGGGAGTACTAG...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGTGCCCGTGGAGTCTTTaGTGTTGTAGGCGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: PGLPGRGTSGFLPPRSPECPWSL*CCRRRH Trigger: ATGACGGCGCCTACAACATCAAAGACTCCACGGGCA...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCAGCCGGCGACACGCTCTaGGCGAAGCAGGACAGGCGG | + |
Preference number: 4 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSAGDTL*AKQDRR Trigger: CCGCCTGTCCTGCTTCGCGCAGAGCGTGTCGCCGGC...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031565.15 |
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CDS-3UTR TCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAAGCGGAACTCCAGCGTaGAGCCCGTGGCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: VWEDVEHQSQSQSWGGQASGTPA*SPWRAP Trigger: CGGAGCCCGCCACGGGCTTCACGCTGGAGTTCCGCT...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031565.15 |
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CDS-3UTR GCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGCAGCGGCCGTCGTCGTaGGCCACGACGAGAAAGCGG | + |
Preference number: 4 (lower is better) Translates to: SPEVSGKTWSTNHRARAGQRPSS*ATTRKR Trigger: CCGCTTTCTCGTCGTGGCGCACGACGACGGCCGCTG...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031565.15 |
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CDS-3UTR GCA 90 bp | AACCAGAGTCCCTCCTGGGGACAGTCTGCAGCCACCGACCCATGGGGAGCAGTGGAGTTCCGAGTCCCCTaGTGTCTCCACCGAGGCGGC | + |
Preference number: 4 (lower is better) Translates to: NQSPSWGQSAATDPWGAVEFRVP*CLHRGG Trigger: GCCGCCTCGGTGGAGACAGCAGGGGACTCGGAACTC...CACTGCTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | CACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGGCCTCATCGGGAGGTTaGTCCAGCGTCCAGATCTGC | + |
Preference number: 4 (lower is better) Translates to: HIRLSPAQEPRGVWEDVEASSGG*SSVQIC Trigger: GCAGATCTGGACGCTGGAGCAACCTCCCGATGAGGC...CTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCTGTCGCTGCTGCTGGTaGCCGAGGAATCACTACCCA | + |
Preference number: 4 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLCRCCW*PRNHYP Trigger: TGGGTAGTGATTCCTCGGTCACCAGCAGCAGCGACA...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAGAGTTCCGAGTCCCCTaGTGTCTCCACCGAGGCGGC | + |
Preference number: 4 (lower is better) Translates to: VWEDVEHQSQSQSWGGQAEFRVP*CLHRGG Trigger: GCCGCCTCGGTGGAGACAGCAGGGGACTCGGAACTC...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | CACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGTGCCCGTGGAGTCTTTaGTGTTGTAGGCGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: HIRLSPAQEPRGVWEDVECPWSL*CCRRRH Trigger: ATGACGGCGCCTACAACATCAAAGACTCCACGGGCA...CTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCAGCCTCATCGGGAGGTTaGTCCAGCGTCCAGATCTGC | + |
Preference number: 4 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSASSGG*SSVQIC Trigger: GCAGATCTGGACGCTGGAGCAACCTCCCGATGAGGC...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | CACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGTCAGTGTCCAGTACTTaGCCGTGTGGGTGCGAAAGG | + |
Preference number: 4 (lower is better) Translates to: HIRLSPAQEPRGVWEDVESVSST*PCGCER Trigger: CCTTTCGCACCCACACGGGCAAGTACTGGACACTGA...CTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | AGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGTGTCGCTGCTGCTGGTaGCCGAGGAATCACTACCCA | + |
Preference number: 4 (lower is better) Translates to: SPEVSGKTWSTNHRARAGCRCCW*PRNHYP Trigger: TGGGTAGTGATTCCTCGGTCACCAGCAGCAGCGACA...CCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR TCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCACTAGTACTCCCAGAGTaGGGCGGGGTCGATAGTCTC | + |
Preference number: 4 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSLVLPE*GGVDSL Trigger: GAGACTATCGACCCCGCCTCACTCTGGGAGTACTAG...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAGACAGGTCCATTCCCTaGCGCGTGGACACGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: VWEDVEHQSQSQSWGGQADRSIP*RVDTFL Trigger: GAGGAACGTGTCCACGCGCCAGGGAATGGACCTGTC...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CCA 90 bp | AACCAGAGTCCCTCCTGGGGACAGTCTGCAGCCACCGACCCATGGGGAGCAGTGAGCAGCTGGCGTTCTTaGTGGACGCAGTGGATTGCA | + |
Preference number: 4 (lower is better) Translates to: NQSPSWGQSAATDPWGAVSSWRS*WTQWIA Trigger: TGCAATCCACTGCGTCCACCAAGAACGCCAGCTGCT...CACTGCTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | GAGGGAACCAGAGTCCCTCCTGGGGACAGTCTGCAGCCACCGACCCATGGGGAGCAAGCTACTAGCGGATaGGTTCACCTTGAACCCGAA | + |
Preference number: 4 (lower is better) Translates to: EGTRVPPGDSLQPPTHGEQATSG*VHLEPE Trigger: TTCGGGTTCAAGGTGAACGCATCCGCTAGTAGCTTG...CTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCAAGCTACTAGCGGATaGGTTCACCTTGAACCCGAA | + |
Preference number: 4 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLQATSG*VHLEPE Trigger: TTCGGGTTCAAGGTGAACGCATCCGCTAGTAGCTTG...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCAGACACACGGCCGCGCTaGCCGCCTCATCGGGAGGTT | + |
Preference number: 4 (lower is better) Translates to: FESKSQAQTLQDGTDCLPDTRPR*PPHREV Trigger: AACCTCCCGATGAGGCGGGCAGCGCGGCCGTGTGTC...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | CTTTCTCCCGCCCAGGAGCCCCGAGGTGTCTGGGAAGACGTGGAGCACCAATCATGGCGGTCACAAACTTaGCGTTGGAGGCTCTCAGAG | + |
Preference number: 4 (lower is better) Translates to: LSPAQEPRGVWEDVEHQSWRSQT*RWRLSE Trigger: CTCTGAGAGCCTCCAACGGCAAGTTTGTGACCGCCA...TGATTGGTGCTCCACGTCTTCCCAGACACCTCGGGGCTCCTGGGCGGGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCATCAGTGTCCAGTACTTaGCCGTGTGGGTGCGAAAGG | + |
Preference number: 4 (lower is better) Translates to: VWEDVEHQSQSQSWGGQASVSST*PCGCER Trigger: CCTTTCGCACCCACACGGGCAAGTACTGGACACTGA...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CCA 90 bp | GTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCAAGCAGCTGGCGTTCTTaGTGGACGCAGTGGATTGCA | + |
Preference number: 4 (lower is better) Translates to: VWEDVEHQSQSQSWGGQASSWRS*WTQWIA Trigger: TGCAATCCACTGCGTCCACCAAGAACGCCAGCTGCT...TGCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCAGACAGGTCCATTCCCTaGCGCGTGGACACGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: FESKSQAQTLQDGTDCLPDRSIP*RVDTFL Trigger: GAGGAACGTGTCCACGCGCCAGGGAATGGACCTGTC...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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3UTR CAA 72 bp | GACAGACTGCCTTCCAGCCAAGATCCAGAAAAACACTaGTGGGCAAGGTTGGCCATGCCCGGCTTCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: DRLPSSQDPEKH*WARLAMPGFSP Trigger: GGGACTGAAGCCGGGCATGGCCAACCTTGCCCACAAGTGTTTTTCTGGATCTTGGCTGGAAGGCAGTCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR GCA 90 bp | TTTGAGTCAAAGAGCCAGGCCCAAACACTGCAGGATGGGACAGACTGCCTTCCATGGCGGTCACAAACTTaGCGTTGGAGGCTCTCAGAG | + |
Preference number: 4 (lower is better) Translates to: FESKSQAQTLQDGTDCLPWRSQT*RWRLSE Trigger: CTCTGAGAGCCTCCAACGGCAAGTTTGTGACCGCCA...TGGAAGGCAGTCTGTCCCATCCTGCAGTGTTTGGGCCTGGCTCTTTGACTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CAA 90 bp | CCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCCCGCCCAGGAGCCCCGAGGTCAGTGTCCAGTACTaGCCCGTGTGGGTGCGAAAG | + |
Preference number: 5 (lower is better) Translates to: PGLPGRGTSGFLPPRSPEVSVQY*PVWVRK Trigger: CTTTCGCACCCACACGGGCAAGTACTGGACACTGAC...CTCGGGGCTCCTGGGCGGGAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CAA 90 bp | AACCAGAGTCCCTCCTGGGGACAGTCTGCAGCCACCGACCCATGGGGAGCAGTGAGAGTGCCCGTGACCTaGCGGCAGCCAATGAACCCG | + |
Preference number: 5 (lower is better) Translates to: NQSPSWGQSAATDPWGAVRVPVT*RQPMNP Trigger: CGGGTTCATTGGCTGCCGCAAGGTCACGGGCACTCT...CACTGCTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CAA 90 bp | AACCAGAGTCCCTCCTGGGGACAGTCTGCAGCCACCGACCCATGGGGAGCAGTGGTCAGTGTCCAGTACTaGCCCGTGTGGGTGCGAAAG | + |
Preference number: 5 (lower is better) Translates to: NQSPSWGQSAATDPWGAVVSVQY*PVWVRK Trigger: CTTTCGCACCCACACGGGCAAGTACTGGACACTGAC...CACTGCTCCCCATGGGTCGGTGGCTGCAGACTGTCCCCAGGAGGGACTCTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CAA 90 bp | GGCCCCCTGAGGTTTACTCCAGGGCTCCCAGGGAGGGGCACATCCGGCTTTCTCTTGGCGGTCACAAACTaGCCGTTGGAGGCTCTCAGA | + |
Preference number: 5 (lower is better) Translates to: GPLRFTPGLPGRGTSGFLLAVTN*PLEALR Trigger: TCTGAGAGCCTCCAACGGCAAGTTTGTGACCGCCAA...GAGAAAGCCGGATGTGCCCCTCCCTGGGAGCCCTGGAGTAAACCTCAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |
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CDS-3UTR CAA 90 bp | TGTCTGGGAAGACGTGGAGCACCAATCACAGAGCCAGAGCTGGGGTGGTCAGGCTTGGCGGTCACAAACTaGCCGTTGGAGGCTCTCAGA | + |
Preference number: 5 (lower is better) Translates to: CLGRRGAPITEPELGWSGLAVTN*PLEALR Trigger: TCTGAGAGCCTCCAACGGCAAGTTTGTGACCGCCAA...GCCTGACCACCCCAGCTCTGGCTCTGTGATTGGTGCTCCACGTCTTCCCAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031565.15 ENSMUST00000198017.5 |