Pregenerated sensors for FRZB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027004Ensembl transcript IDs: ENSMUST00000028389.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAGAACACTGCTGTTAATGGCTCAAGGGCTACTGATTCCAGTGTaGCCCTTAACCAGGCAAAATATTCTTTTCTTGGCTCCCAACACT | + |
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Preference number: 1 (lower is better) Translates to: RRTLLLMAQGLLIPV*PLTRQNILFLAPNT Trigger: AGTGTTGGGAGCCAAGAAAAGAATATTTTGCCTGGTTAAGGGGCACACTGGAATCAGTAGCCCTTGAGCCATTAACAGCAGTGTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR GCA 90 bp | CCAACACTATTTATTTTGCTGCCTGCCAATCTTGAAAATAAGTCATaGTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: PTLFILLPANLENKS*CVAFPHKCFLVLGY Trigger: GTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTATTTTCAAGATTGGCAGGCAGCAAAATAAATAGTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CCA 90 bp | TTGAAAATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTaGTGTTGGGCTACTCTGCTTGTGCAGTGTCTGATTTCAAAATGC | + |
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Preference number: 1 (lower is better) Translates to: LKISHAVWRFLINAS*CWATLLVQCLISKC Trigger: GCATTTTGAAATCAGACACTGCACAAGCAGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTATTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CCA 90 bp | TATTTATTTTGCTGCCTGCCAATCTTGAAAATAAGTCATGCTGTGTaGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: YLFCCLPILKISHAV*RFLINASWCWATLL Trigger: AAGCAGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTATTTTCAAGATTGGCAGGCAGCAAAATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR TCA 90 bp | TATAAGCGCAGCAGCAGAGGCTGTCTTACAGCAATATCTAGTTCTTaGGATATGACCAGGATTCTCTCTTTACATGAAACATTGCATTCT | + |
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Preference number: 1 (lower is better) Translates to: YKRSSRGCLTAISSS*DMTRILSLHETLHS Trigger: AGAATGCAATGTTTCATGTAAAGAGAGAATCCTGGTCATATCTCAAGAACTAGATATTGCTGTAAGACAGCCTCTGCTGCTGCGCTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CCA 90 bp | GCTTCATACCTGTTTTATTTTTCAGCACACTGTAACTTAGGAATCTaGACCTACTACTACCACATGTGTAAATTTCAGGGAATGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: ASYLFYFSAHCNLGI*TYYYHMCKFQGMRL Trigger: AAGTCTCATTCCCTGAAATTTACACATGTGGTAGTAGTAGGTCCAGATTCCTAAGTTACAGTGTGCTGAAAAATAAAACAGGTATGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTAAATTTCAGGGAATGAGACTTTCAGGTGATGGGCACATCCCTGCTGCAATAACTTTCACAGCATaGGGGAAATGGCCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: MCKFQGMRLSGDGHIPAAITFTA*GKWPKA Trigger: TGCCTTTGGCCATTTCCCTCATGCTGTGAAAGTTAT...TGCAGCAGGGATGTGCCCATCACCTGAAAGTCTCATTCCCTGAAATTTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CCA 90 bp | ATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTTTAGAAGGGAGTCCGTaGGTGTGGCCTTTTACATTT | + |
|
Preference number: 2 (lower is better) Translates to: ISHAVWRFLINASWCWATLEGSP*VWPFTF Trigger: AAATGTAAAAGGCCACACCCACGGACTCCCTTCTAA...AGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCTAGTTCTTGAGATATaGCCAGGATTCTCTCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ISHAVWRFLINASWCWATLVLEI*PGFSLY Trigger: GTAAAGAGAGAATCCTGGTCATATCTCAAGAACTAG...AGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | GTTGTCGTCTCTGTTGACAACCATATTCCTTTTATTAGACATCTTGATGGAGCAGCGTTTCCTCATAAATaGTTCCTGGTGTTGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: VVVSVDNHIPFIRHLDGAAFPHK*FLVLGY Trigger: GTAGCCCAACACCAGGAAGCATTTATGAGGAAACGC...TGCTCCATCAAGATGTCTAATAAAAGGAATATGGTTGTCAACAGAGACGACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | CAAATCAAAAACGTTGCCAGAAGAACACTGCTGTTAATGGCTCAAGGGCTACTGCTTGAAAATAAGTCATaGTGTGTGGCGTTTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QIKNVARRTLLLMAQGLLLENKS*CVAFPH Trigger: ATGAGGAAACGCCACACAGCATGACTTATTTTCAAG...CAGTAGCCCTTGAGCCATTAACAGCAGTGTTCTTCTGGCAACGTTTTTGATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTAATGCTTCCTGGTGTTaGGCTACTCTGCTTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTNASWC*ATLLVQ Trigger: CTGCACAAGCAGAGTAGCCCAACACCAGGAAGCATT...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATCAAAAACGTTGCCAGAAGAACACTGCTGTTAATGGCTCAAGGGCTACTGATAAGTCATGCTGTGTaGCGTTTCCTCATAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: QIKNVARRTLLLMAQGLLISHAV*RFLINA Trigger: AGCATTTATGAGGAAACGCCACACAGCATGACTTAT...CAGTAGCCCTTGAGCCATTAACAGCAGTGTTCTTCTGGCAACGTTTTTGATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCTTTACATGAAACATTaGATTCTCAATCAGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: ISHAVWRFLINASWCWATLYMKH*ILNQGT Trigger: TGTACCCTGATTGAGAATGCAATGTTTCATGTAAAG...AGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCGTCTCTGTTGACAACCATATTCCTTTTATTAGACATCTTGATGGAGCATTCACGAGCACAACTGTaGGGTTTTCCTTTGTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSSLLTTIFLLLDILMEHSRAQL*GFPLLV Trigger: GACTAACAAAGGAAAACCGCACAGTTGTGCTCGTGA...ATGCTCCATCAAGATGTCTAATAAAAGGAATATGGTTGTCAACAGAGACGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR TCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTTGCTTGTGCAGTGTCTaGTTTCAAAATGCCGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTCLCSV*FQNAVL Trigger: TAGAACGGCATTTTGAAATCAGACACTGCACAAGCA...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR TCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTAGAACAGTCCCCACGTaGTTGATGAAACAGAATATA | + |
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Preference number: 2 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTRTVPT*LMKQNI Trigger: TATATTCTGTTTCATCAATCACGTGGGGACTGTTCT...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR TCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTAGCCAAATTTATTTATaGATGGAGAGGGAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTSQIYL*MEREHP Trigger: TGGATGCTCCCTCTCCATTCATAAATAAATTTGGCT...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | TACCTGTTTTATTTTTCAGCACACTGTAACTTAGGAATCTGGACCTACTACTACATTTACTATTCTGGTTaGAAAAGAACAGTCCCCACG | + |
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Preference number: 2 (lower is better) Translates to: YLFYFSAHCNLGIWTYYYIYYSG*KRTVPT Trigger: CGTGGGGACTGTTCTTTTGCAACCAGAATAGTAAAT...GTAGTAGTAGGTCCAGATTCCTAAGTTACAGTGTGCTGAAAAATAAAACAGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCGTCTCTGTTGACAACCATATTCCTTTTATTAGACATCTTGATGGAGCATACACCCTGGTGCACATaGATGCATACTTTAATACTT | + |
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Preference number: 2 (lower is better) Translates to: LSSLLTTIFLLLDILMEHTPWCT*MHTLIL Trigger: AAGTATTAAAGTATGCATGCATGTGCACCAGGGTGT...ATGCTCCATCAAGATGTCTAATAAAAGGAATATGGTTGTCAACAGAGACGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR GCA 72 bp | GTGTCTGCGGTAAACAATCGGTCACGAGCACAACTGTaGGGTTTTCCTTTGTTAGTCCAGCAGCGCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VSAVNNRSRAQL*GFPLLVQQRQS Trigger: AGACTGGCGCTGCTGGACTAACAAAGGAAAACCGCACAGTTGTGCTCGTGACCGATTGTTTACCGCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CCA 72 bp | AGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTaGTGTTGGGCTACTCTGCTTGTGCAGTGTCTGATT | + |
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Preference number: 3 (lower is better) Translates to: SHAVWRFLINAS*CWATLLVQCLI Trigger: AATCAGACACTGCACAAGCAGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR GCA 72 bp | GAAAATAAGTCATGCTGTGTGGCGTTTCCTCATAAATaGTTCCTGGTGTTGGGCTACTCTGCTTGTGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ENKSCCVAFPHK*FLVLGYSACAV Trigger: CACTGCACAAGCAGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR GCA 72 bp | CTGCTGTTAATGGCTCAAGGGCTACTGATTCCAGTGTaGCCCTTAACCAGGCAAAATATTCTTTTCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: LLLMAQGLLIPV*PLTRQNILFLA Trigger: AGCCAAGAAAAGAATATTTTGCCTGGTTAAGGGGCACACTGGAATCAGTAGCCCTTGAGCCATTAACAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CAA 90 bp | AAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCTTCTTTACATGAAACATaGCATTCTCAATCAGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: KSCCVAFPHKCFLVLGYSSLHET*HSQSGY Trigger: GTACCCTGATTGAGAATGCAATGTTTCATGTAAAGA...AGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCAATCAGGGTACAGAACACCAAATTAAACCCAGGGAGTCCAGTACAGAAAATTTACTATTCTGGTaGCAAAAGAACAGTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: ILNQGTEHQIKPRESSTENLLFW*QKNSPH Trigger: GTGGGGACTGTTCTTTTGCAACCAGAATAGTAAATT...TTCTGTACTGGACTCCCTGGGTTTAATTTGGTGTTCTGTACCCTGATTGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR TCA 72 bp | AGCAGCAGAGGCTGTCTTACAGCAATATCTAGTTCTTaGGATATGACCAGGATTCTCTCTTTACATGAAACA | + |
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Preference number: 3 (lower is better) Translates to: SSRGCLTAISSS*DMTRILSLHET Trigger: TGTTTCATGTAAAGAGAGAATCCTGGTCATATCTCAAGAACTAGATATTGCTGTAAGACAGCCTCTGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR TCA 72 bp | CTTTTCCTGGCCAATACAGCAAGCCAAATTTATTTATaGATGGAGAGGGAGCATCCAACAATGGGTTTGATT | + |
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Preference number: 3 (lower is better) Translates to: LFLANTASQIYL*MEREHPTMGLI Trigger: AATCAAACCCATTGTTGGATGCTCCCTCTCCATTCATAAATAAATTTGGCTTGCTGTATTGGCCAGGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR TCA 72 bp | ATTTATGAATGGAGAGGGAGCATCCAACAATGGGTTTaGTTTAGAAGGAAGCAGAGCTATAGTGATAACAAC | + |
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Preference number: 3 (lower is better) Translates to: IYEWRGSIQQWV*FRRKQSYSDNN Trigger: GTTGTTATCACTATAGCTCTGCTTCCTTCTAAATCAAACCCATTGTTGGATGCTCCCTCTCCATTCATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR-3UTR CAA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTAACAAATCAAAAACGTaGCCAGAAGAACACTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTNKSKT*PEEHCC Trigger: ACAGCAGTGTTCTTCTGGCAACGTTTTTGATTTGTT...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR TCA 72 bp | GAGGCTGTCTTACAGCAATATCTAGTTCTTGAGATATaGCCAGGATTCTCTCTTTACATGAAACATTGCATT | + |
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Preference number: 3 (lower is better) Translates to: EAVLQQYLVLEI*PGFSLYMKHCI Trigger: AATGCAATGTTTCATGTAAAGAGAGAATCCTGGTCATATCTCAAGAACTAGATATTGCTGTAAGACAGCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CCA 72 bp | CTGTTTTATTTTTCAGCACACTGTAACTTAGGAATCTaGACCTACTACTACCACATGTGTAAATTTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LFYFSAHCNLGI*TYYYHMCKFQG Trigger: TCCCTGAAATTTACACATGTGGTAGTAGTAGGTCCAGATTCCTAAGTTACAGTGTGCTGAAAAATAAAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CCA 90 bp | AGGGAAATGGCCAAAGGCATACAAACACAAGACTATAAGCGCAGCAGCAGAGGCAGATCCGGGCTGCAGTaGGTGCCCAGCAGCCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: REMAKGIQTQDYKRSSRGRSGLQ*VPSSPS Trigger: CGAAGGGCTGCTGGGCACCCACTGCAGCCCGGATCT...GCCTCTGCTGCTGCGCTTATAGTCTTGTGTTTGTATGCCTTTGGCCATTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR TCA 90 bp | CAAATCAAAAACGTTGCCAGAAGAACACTGCTGTTAATGGCTCAAGGGCTACTGTCACAGGCTGCAGCCTaGGCTCCGGGCACCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QIKNVARRTLLLMAQGLLSQAAA*APGTWS Trigger: GCTCCAGGTGCCCGGAGCTCAGGCTGCAGCCTGTGA...CAGTAGCCCTTGAGCCATTAACAGCAGTGTTCTTCTGGCAACGTTTTTGATTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAATTTCAGGGAATGAGACTTTCAGGTGATGGGCACATCCCTGCTGCAGACAGGCTCACAGGCTaGAGCCTGAGCTCCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: MCKFQGMRLSGDGHIPAADRLTG*SLSSGH Trigger: GTGCCCGGAGCTCAGGCTGCAGCCTGTGAGCCTGTC...TGCAGCAGGGATGTGCCCATCACCTGAAAGTCTCATTCCCTGAAATTTACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | TCCTGGTGTTGGGCTACTCTGCTTGTGCAGTGTCTGATTTCAAAATGCCGTTCTTCCAGGGAAGGGACTTaGACAGCGGGATGCGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SWCWATLLVQCLISKCRSSREGT*TAGCGQ Trigger: CTGTCCGCATCCCGCTGTGCAAGTCCCTTCCCTGGA...AGAACGGCATTTTGAAATCAGACACTGCACAAGCAGAGTAGCCCAACACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | ATTCTCAATCAGGGTACAGAACACCAAATTAAACCCAGGGAGTCCAGTACAGAACCGGGCTGCAGTGGGTaGCCAGCAGCCCTTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: ILNQGTEHQIKPRESSTEPGCSG*PAALRT Trigger: AGTTCGAAGGGCTGCTGGGCACCCACTGCAGCCCGG...TTCTGTACTGGACTCCCTGGGTTTAATTTGGTGTTCTGTACCCTGATTGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | TCCTGGTGTTGGGCTACTCTGCTTGTGCAGTGTCTGATTTCAAAATGCCGTTCTGCAACGTTCGCTGCTTaGCCCTCTGCAGTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SWCWATLLVQCLISKCRSATFAA*PSAVSS Trigger: ACTGGACACTGCAGAGGGGCAAGCAGCGAACGTTGC...AGAACGGCATTTTGAAATCAGACACTGCACAAGCAGAGTAGCCCAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR TCA 90 bp | TTGTCGTCTCTGTTGACAACCATATTCCTTTTATTAGACATCTTGATGGAGCATCCGCTCCGTCCGCGGTaGCGATGGCCTCAGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSSLLTTIFLLLDILMEHPLRPR*RWPQER Trigger: TCTCTCCTGAGGCCATCGTCACCGCGGACGGAGCGG...ATGCTCCATCAAGATGTCTAATAAAAGGAATATGGTTGTCAACAGAGACGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | ATTCTCAATCAGGGTACAGAACACCAAATTAAACCCAGGGAGTCCAGTACAGAAACTTGCACAGCGGGATaGGGACAGGCTCACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ILNQGTEHQIKPRESSTETCTAG*GQAHRL Trigger: CAGCCTGTGAGCCTGTCCGCATCCCGCTGTGCAAGT...TTCTGTACTGGACTCCCTGGGTTTAATTTGGTGTTCTGTACCCTGATTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | TGGTGCACATGCATGCATACTTTAATACTTTCTTTTCCTGGCCAATACAGCAAGAGAGAAGATCCGGGCTaGAGTGGGTGCCCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: WCTCMHTLILSFPGQYSKREDPG*SGCPAA Trigger: GGCTGCTGGGCACCCACTGCAGCCCGGATCTTCTCT...CTTGCTGTATTGGCCAGGAAAAGAAAGTATTAAAGTATGCATGCATGTGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CCA 90 bp | AGGGAAATGGCCAAAGGCATACAAACACAAGACTATAAGCGCAGCAGCAGAGGCTTGATGGGCTCGTGCTaGAAGTCGATGGTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: REMAKGIQTQDYKRSSRGLMGSC*KSMVQM Trigger: CATTTGCACCATCGACTTCCAGCACGAGCCCATCAA...GCCTCTGCTGCTGCGCTTATAGTCTTGTGTTTGTATGCCTTTGGCCATTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CCA 90 bp | TTGGGCTACTCTGCTTGTGCAGTGTCTGATTTCAAAATGCCGTTCTACCTTTATCTTTCCGGCCACGAGTaGCGGTACTTGATGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: LGYSACAVSDFKMPFYLYLSGHE*RYLMRM Trigger: CATTCTCATCAAGTACCGCCACTCGTGGCCGGAAAG...ATAAAGGTAGAACGGCATTTTGAAATCAGACACTGCACAAGCAGAGTAGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CCA 90 bp | AAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCTCTACCAAGAGTAACCTaGAACGTTCCTCGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSCCVAFPHKCFLVLGYSLPRVT*NVPRLH Trigger: ATGAAGACGAGGAACGTTCCAGGTTACTCTTGGTAG...AGAGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR TCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTCAGACTTGCAGGGCTTaGTGGGCTCGTGCTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTQTCRA*WARAGS Trigger: ACTTCCAGCACGAGCCCATCAAGCCCTGCAAGTCTG...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR TCA 90 bp | ATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTACGGCGGTCACATCATaGCATTTCATCTTTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: ISHAVWRFLINASWCWATTAVTS*HFIFTS Trigger: AGAGGTAAAGATGAAATGTCATGATGTGACCGCCGT...AGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | TACATACCTCTGTTAAATAACACCCTGGTGCACATGCATGCATACTTTAATACTGGCTTGATGGGCTCGTaGTGGAAGTCGATGGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: YIPLLNNTLVHMHAYFNTGLMGS*WKSMVQ Trigger: TTGCACCATCGACTTCCAGCACGAGCCCATCAAGCC...AGTATTAAAGTATGCATGCATGTGCACCAGGGTGTTATTTAACAGAGGTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR GCA 90 bp | TACCTGTTTTATTTTTCAGCACACTGTAACTTAGGAATCTGGACCTACTACTACCGCTGCTTGCCCCTCTaGAGTGTCCAGTACTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: YLFYFSAHCNLGIWTYYYRCLPL*SVQYLN Trigger: ATTCAAGTACTGGACACTGCAGAGGGGCAAGCAGCG...GTAGTAGTAGGTCCAGATTCCTAAGTTACAGTGTGCTGAAAAATAAAACAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CCA 90 bp | TCCAACAATGGGTTTGATTTAGAAGGAAGCAGAGCTATAGTGATAACAACAGATCTCATTGACAGTAAGTaGAGGACAGAGGCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SNNGFDLEGSRAIVITTDLIDSK*RTEAAR Trigger: TCTGGCTGCCTCTGTCCTCCACTTACTGTCAATGAG...ATCTGTTGTTATCACTATAGCTCTGCTTCCTTCTAAATCAAACCCATTGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| 3UTR CAA 72 bp | AACCTTAGCATCAACATATTTAATTTACTATTCTGGTaGCAAAAGAACAGTCCCCACGTGATTGATGAAACA | + |
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Preference number: 4 (lower is better) Translates to: NLSINIFNLLFW*QKNSPHVIDET Trigger: TGTTTCATCAATCACGTGGGGACTGTTCTTTTGCAACCAGAATAGTAAATTAAATATGTTGATGCTAAGGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS GCA 90 bp | CCAGGGAAGGGACTTGCACAGCGGGATGCGGACAGGCTCACAGGCTaGAGCCTGAGCTCCGGGCACCTGGAGCAGGCAGAGAGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PGKGLAQRDADRLTG*SLSSGHLEQAESSQ Trigger: CTGGCTGCTCTCTGCCTGCTCCAGGTGCCCGGAGCTCAGGCTGCAGCCTGTGAGCCTGTCCGCATCCCGCTGTGCAAGTCCCTTCCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS GCA 90 bp | TGGGCATCTTGGTCATGTTCCAGGGAAGGGACTTGCACAGCGGGATaGGGACAGGCTCACAGGCTGCAGCCTGAGCTCCGGGCACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: WASWSCSREGTCTAG*GQAHRLQPELRAPG Trigger: TCCAGGTGCCCGGAGCTCAGGCTGCAGCCTGTGAGCCTGTCCGCATCCCGCTGTGCAAGTCCCTTCCCTGGAACATGACCAAGATGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS TCA 90 bp | ACATTTGCAACGTTCGCTGCTTGCCCCTCTGCAGTGTCCAGTACTTaGATCCATAGGAAAATCCGCTCCGTCCGCGGTGACGATGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: TFATFAACPSAVSST*IHRKIRSVRGDDGL Trigger: GAGGCCATCGTCACCGCGGACGGAGCGGATTTTCCTATGGATTCAAGTACTGGACACTGCAGAGGGGCAAGCAGCGAACGTTGCAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CAA 90 bp | TCCTGGTGTTGGGCTACTCTGCTTGTGCAGTGTCTGATTTCAAAATGCCGTTCTACAGACTTGCAGGGCTaGATGGGCTCGTGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SWCWATLLVQCLISKCRSTDLQG*MGSCWK Trigger: CTTCCAGCACGAGCCCATCAAGCCCTGCAAGTCTGT...AGAACGGCATTTTGAAATCAGACACTGCACAAGCAGAGTAGCCCAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CAA 90 bp | ATAAGTCATGCTGTGTGGCGTTTCCTCATAAATGCTTCCTGGTGTTGGGCTACTCGCTCACACACAGACTaGCAGGGCTTGATGGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ISHAVWRFLINASWCWATRSHTD*QGLMGS Trigger: CGAGCCCATCAAGCCCTGCAAGTCTGTGTGTGAGCG...AGTAGCCCAACACCAGGAAGCATTTATGAGGAAACGCCACACAGCATGACTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS CCA 90 bp | CTCGTCTTCATAGCCCATGATGACATATTCCTCATTGACAGTAAGTaGAGGACAGAGGCAGCCAGAGGTGGTATAAAGATTGACGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LVFIAHDDIFLIDSK*RTEAARGGIKIDGV Trigger: GACACCGTCAATCTTTATACCACCTCTGGCTGCCTCTGTCCTCCACTTACTGTCAATGAGGAATATGTCATCATGGGCTATGAAGACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CAA 90 bp | GTTGTCGTCTCTGTTGACAACCATATTCCTTTTATTAGACATCTTGATGGAGCACACGAGTGGCGGTACTaGATGAGAATGGGCTCGCAG | + |
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Preference number: 5 (lower is better) Translates to: VVVSVDNHIPFIRHLDGAHEWRY*MRMGSQ Trigger: CTGCGAGCCCATTCTCATCAAGTACCGCCACTCGTG...TGCTCCATCAAGATGTCTAATAAAAGGAATATGGTTGTCAACAGAGACGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS-3UTR CAA 90 bp | TGGTGCACATGCATGCATACTTTAATACTTTCTTTTCCTGGCCAATACAGCAAGATGACATATTCCTCATaGACAGTAAGTGGAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: WCTCMHTLILSFPGQYSKMTYSS*TVSGGQ Trigger: CTGTCCTCCACTTACTGTCAATGAGGAATATGTCAT...CTTGCTGTATTGGCCAGGAAAAGAAAGTATTAAAGTATGCATGCATGTGCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS GCA 72 bp | GGACTTGCACAGCGGGATGCGGACAGGCTCACAGGCTaGAGCCTGAGCTCCGGGCACCTGGAGCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GLAQRDADRLTG*SLSSGHLEQAE Trigger: CTCTGCCTGCTCCAGGTGCCCGGAGCTCAGGCTGCAGCCTGTGAGCCTGTCCGCATCCCGCTGTGCAAGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS CAA 72 bp | TCGCAGGCCAAGCTTTCCGGCCACGAGTGGCGGTACTaGATGAGAATGGGCTCGCAGCCCTGTCGGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SQAKLSGHEWRY*MRMGSQPCRAR Trigger: GCGCGCCCGACAGGGCTGCGAGCCCATTCTCATCAAGTACCGCCACTCGTGGCCGGAAAGCTTGGCCTGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS CAA 72 bp | CCCTGTCGGGCGCGCTCACACACAGACTTGCAGGGCTaGATGGGCTCGTGCTGGAAGTCGATGGTGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: PCRARSHTDLQG*MGSCWKSMVQM Trigger: CATTTGCACCATCGACTTCCAGCACGAGCCCATCAAGCCCTGCAAGTCTGTGTGTGAGCGCGCCCGACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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| CDS TCA 72 bp | ACGTTCGCTGCTTGCCCCTCTGCAGTGTCCAGTACTTaGATCCATAGGAAAATCCGCTCCGTCCGCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: TFAACPSAVSST*IHRKIRSVRGD Trigger: GTCACCGCGGACGGAGCGGATTTTCCTATGGATTCAAGTACTGGACACTGCAGAGGGGCAAGCAGCGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028389.4 |
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