Pregenerated sensors for FRS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020170Ensembl transcript IDs: ENSMUST00000020381.5
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCAGCTCCACGTGGGAGGACAGCAGAGCAGGGAGAGCGGGCCTaGAGCCATGGAGCTGAGACAACCCCTGCTAAAGTGCAGCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SPAPRGRTAEQGERA*SHGAETTPAKVQRR Trigger: CCTGCGCTGCACTTTAGCAGGGGTTGTCTCAGCTCCATGGCTGCAGGCCCGCTCTCCCTGCTCTGCTGTCCTCCCACGTGGAGCTGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CCA 90 bp | AAAGCACCCAGCCTGCAGACGGCCGCGCAGACCAGCCCTCTGAGGTaGAGGGCTAATTCTGTCTGGACCTGCGCCCTTCCCATAAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: KAPSLQTAAQTSPLR*RANSVWTCALPISV Trigger: GACGCTTATGGGAAGGGCGCAGGTCCAGACAGAATTAGCCCTCCACCTCAGAGGGCTGGTCTGCGCGGCCGTCTGCAGGCTGGGTGCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CCA 90 bp | ACGGCCGCGCAGACCAGCCCTCTGAGGTGGAGGGCTAATTCTGTCTaGACCTGCGCCCTTCCCATAAGCGTCCTTACCCCACACCACAAA | + |
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Preference number: 1 (lower is better) Translates to: TAAQTSPLRWRANSV*TCALPISVLTPHHK Trigger: TTTGTGGTGTGGGGTAAGGACGCTTATGGGAAGGGCGCAGGTCCAGACAGAATTAGCCCTCCACCTCAGAGGGCTGGTCTGCGCGGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | GCGCAGACCAGCCCTCTGAGGTGGAGGGCTAATTCTGTCTGGACCTaGGCCCTTCCCATAAGCGTCCTTACCCCACACCACAAAACCACC | + |
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Preference number: 1 (lower is better) Translates to: AQTSPLRWRANSVWT*ALPISVLTPHHKTT Trigger: GGTGGTTTTGTGGTGTGGGGTAAGGACGCTTATGGGAAGGGCGCAGGTCCAGACAGAATTAGCCCTCCACCTCAGAGGGCTGGTCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | TCAATGATAGGATGCTATGAGAGAACTGTGTTACACCCTGAACATTaGGGACGCAGGGTTGGGAACCAGGCAGCGAGCCGGCAGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: SMIGCYERTVLHPEH*GRRVGNQAASRQGT Trigger: AGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAACCCTGCGTCCTCAATGTTCAGGGTGTAACACAGTTCTCTCATAGCATCCTATCATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | GCCAACCACAACTCAGACATGAAAGCTATGCATCCCCCAGGATGCTaGGGACAGGTCACCCAGCACGGCATTCACTTCAATTCTCGTGGT | + |
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Preference number: 1 (lower is better) Translates to: ANHNSDMKAMHPPGC*GQVTQHGIHFNSRG Trigger: ACCACGAGAATTGAAGTGAATGCCGTGCTGGGTGACCTGTCCTCAGCATCCTGGGGGATGCATAGCTTTCATGTCTGAGTTGTGGTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | AGGAATGTCTCCAACTTTAGAGAAAAGATAACCTATCCCGCAGGCTaGCCCTCCCTGTACTGTCCAGTGGTCGGTCTGGGAGCACATCAG | + |
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Preference number: 1 (lower is better) Translates to: RNVSNFREKITYPAG*PSLYCPVVGLGAHQ Trigger: CTGATGTGCTCCCAGACCGACCACTGGACAGTACAGGGAGGGGCAGCCTGCGGGATAGGTTATCTTTTCTCTAAAGTTGGAGACATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | AGACCAGTCTATAAAGGAGCTAGTGTAGACATGAAGAGGAGGCACTaGATCTTCGCTCTGAACGCCTTGCGGAGAAGGACGCAGTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: RPVYKGASVDMKRRH*IFALNALRRRTQCF Trigger: GAAGCACTGCGTCCTTCTCCGCAAGGCGTTCAGAGCGAAGATGCAGTGCCTCCTCTTCATGTCTACACTAGCTCCTTTATAGACTGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | CAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATTGCCATaGTACAGGGTGTCTGACATTGGCACTGATGGGGTAGCAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: QSHTRPQCRRSVLLP*YRVSDIGTDGVART Trigger: TGTTCTTGCTACCCCATCAGTGCCAATGTCAGACACCCTGTAGCATGGCAATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | TCTCCTGGCTGCCTTCCAATCACAGCACACTCAAGACAGAGGTGCTaGCTGGTACAAAAGGAAGTGTGGTTCTCCTTGTTCTTTGACACG | + |
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Preference number: 1 (lower is better) Translates to: SPGCLPITAHSRQRC*LVQKEVWFSLFFDT Trigger: CGTGTCAAAGAACAAGGAGAACCACACTTCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAAGGCAGCCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | AGCATTACATACAAGGTAAGACAACCCAAAGACCAAAGGGGAAACTaGAGCTCCATGGGACTGAATGGCACGAGTGTCTGCAGACACATG | + |
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Preference number: 1 (lower is better) Translates to: SITYKVRQPKDQRGN*SSMGLNGTSVCRHM Trigger: CATGTGTCTGCAGACACTCGTGCCATTCAGTCCCATGGAGCTTCAGTTTCCCCTTTGGTCTTTGGGTTGTCTTACCTTGTATGTAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | GCACACTTGTCCTTAAAGCATGTTTACATCGTAGATAACTCCTTATaGCTGACAACACGGCTGACATGGCAAGAGGCCCACACTATGACA | + |
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Preference number: 1 (lower is better) Translates to: AHLSLKHVYIVDNSL*LTTRLTWQEAHTMT Trigger: TGTCATAGTGTGGGCCTCTTGCCATGTCAGCCGTGTTGTCAGGCATAAGGAGTTATCTACGATGTAAACATGCTTTAAGGACAAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | GGCACATTGCTGGGAAATGATGAACACATAAGGCCCCGTCCCATTTaGAATAGAACTTTAGTGAGGTACATTTTATATGCTGTGCACACC | + |
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Preference number: 1 (lower is better) Translates to: GTLLGNDEHIRPRPI*NRTLVRYILYAVHT Trigger: GGTGTGCACAGCATATAAAATGTACCTCACTAAAGTTCTATTGCAAATGGGACGGGGCCTTATGTGTTCATCATTTCCCAGCAATGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CCA 90 bp | GGGGTGGGGGAGGCAACATTAATATCTGTAATGACAGAGACTGCTTaGCAAAGTTTCCTAAGTCCGAAATGTGGTCTATTATGGATATGC | + |
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Preference number: 1 (lower is better) Translates to: GVGEATLISVMTETA*QSFLSPKCGLLWIC Trigger: GCATATCCATAATAGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCATTACAGATATTAATGTTGCCTCCCCCACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | ACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTCATCAGATTTaGTTCCACAGAGCAGTTTTCCTGAACGCTGAAGGTCAGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: TFGNKGEVTIRTHQI*FHRAVFLNAEGQCV Trigger: CACACACTGACCTTCAGCGTTCAGGAAAACTGCTCTGTGGAATCAAATCTGATGAGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | ATTTTAGTTCGCAGAGGGAAAGGAAAGGAAGCGTCTGCTATGCTATaGAGCAATGGCGCTGAAGATGATGAAACATCTAGATATTATGGC | + |
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Preference number: 1 (lower is better) Translates to: ILVRRGKGKEASAML*SNGAEDDETSRYYG Trigger: GCCATAATATCTAGATGTTTCATCATCTTCAGCGCCATTGCTTCATAGCATAGCAGACGCTTCCTTTCCTTTCCCTCTGCGAACTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | GAAATGTGGTCTATTATGGATATGCTGAGAAGTGAGTCTTTTTGCTaGGTCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: EMWSIMDMLRSESFC*VFKSKVRVSSLHSS Trigger: ACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGACTCAGCAAAAAGACTCACTTCTCAGCATATCCATAATAGACCACATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CCA 90 bp | GCCCATCATGAGACGACTGTAAAGGACACAGGGATTCTACAGGACTaGTTAAACAGAAACAAAGGTGGTTTCCAGAAGATATCTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: AHHETTVKDTGILQD*LNRNKGGFQKISRN Trigger: ATTTCTAGATATCTTCTGGAAACCACCTTTGTTTCTGTTTAACCAGTCCTGTAGAATCCCTGTGTCCTTTACAGTCGTCTCATGATGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | TGGCAAAGTTTCCTAAGTCCGAAATGTGGTCTATTATGGATATGCTaGGAAGTGAGTCTTTTTGCTGAGTCTTCAAGAGTAAAGTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: WQSFLSPKCGLLWIC*EVSLFAESSRVKCV Trigger: CACGCACTTTACTCTTGAAGACTCAGCAAAAAGACTCACTTCTCAGCATATCCATAATAGACCACATTTCGGACTTAGGAAACTTTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR GCA 90 bp | TGGACAGTGAGTAGCTATCAGGAGATTAGTGTTCTAAGGAGTGCCTaGTCTGCATCAATTCCCTTTAAAGATGAAATATTCAGAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: WTVSSYQEISVLRSA*SASIPFKDEIFRAE Trigger: TTCTGCTCTGAATATTTCATCTTTAAAGGGAATTGATGCAGAGCAGGCACTCCTTAGAACACTAATCTCCTGATAGCTACTCACTGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR TCA 90 bp | AATAACAGTGGTTACGTTTGCCAACCCAAGATTAACCTGCTGATATaGAACAGCATTAAAACACAATTTATGCATAGTACAGTATCACGT | + |
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Preference number: 1 (lower is better) Translates to: NNSGYVCQPKINLLI*NSIKTQFMHSTVSR Trigger: ACGTGATACTGTACTATGCATAAATTGTGTTTTAATGCTGTTTCATATCAGCAGGTTAATCTTGGGTTGGCAAACGTAACCACTGTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACATGACAGAGACTGCTTaGCAAAGTTTCCTAAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: LGTRQRAGRALVCAGHTDMTETA*QSFLSP Trigger: CGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCAT...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CAA 90 bp | TCACTCCACAGCAGTGGGAGAACAAGGAACGATTTGCCCGTCTTCTaGGAGGGAGAGAGGAAGGGAGGGAGAAAGAAGGGAGAGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLHSSGRTRNDLPVF*EGERKGGRKKGERE Trigger: CTCCCTCTCTCCCTTCTTTCTCCCTCCCTTCCTCTCTCCCTCCAAGAAGACGGGCAAATCGTTCCTTGTTCTCCCACTGCTGTGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACAGTGAGTCTTTTTGCTaGGTCTTCAAGAGTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LGTRQRAGRALVCAGHTDSESFC*VFKSKV Trigger: CACTTTACTCTTGAAGACTCAGCAAAAAGACTCACT...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAACACAAAGCACCCAGCCTaGAGACGGCCGCGCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: FKSKVRVSSLHSSGRTRNTKHPA*RRPRRP Trigger: TGGTCTGCGCGGCCGTCTGCAGGCTGGGTGCTTTGT...GTTCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR CAA 90 bp | CCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATaGCCATGCTACAGGGTGTCTGACATTGGCACTGATGGGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: PPQSHTRPQCRRSVL*PCYRVSDIGTDGVA Trigger: TGCTACCCCATCAGTGCCAATGTCAGACACCCTGTAGCATGGCAATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACCTATTATGGATATGCTaGGAAGTGAGTCTTTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGTRQRAGRALVCAGHTDLLWIC*EVSLFA Trigger: AGCAAAAAGACTCACTTCTCAGCATATCCATAATAG...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACAGGGAGAGCGGGCCTaGAGCCATGGAGCTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GREGRHHIFTFQRKMKLGQGERA*SHGAET Trigger: TGTCTCAGCTCCATGGCTGCAGGCCCGCTCTCCCTG...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAATTCTGTCTGGACCTaGGCCCTTCCCATAAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: GEREGGREGGKAPYFHFSNSVWT*ALPISV Trigger: GACGCTTATGGGAAGGGCGCAGGTCCAGACAGAATT...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATACCAGCCCTCTGAGGTaGAGGGCTAATTCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PHFLHKATLGLSVDGLFYTSPLR*RANSVW Trigger: CCAGACAGAATTAGCCCTCCACCTCAGAGGGCTGGT...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCGTGAACAGTGATCTATaGGGGTTCCTCTCAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ETGTQQSGNTSDALSVSSVNSDL*GFLSGP Trigger: GGGCCCTGAGAGGAACCCTCATAGATCACTGTTCAC...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATATGAAGAGGAGGCACTaGATCTTCGCTCTGAACGCC | + |
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Preference number: 2 (lower is better) Translates to: PHFLHKATLGLSVDGLFYMKRRH*IFALNA Trigger: GGCGTTCAGAGCGAAGATGCAGTGCCTCCTCTTCAT...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCAGAGGGCCAGTGACGCCGTTACACACACAAGGTTTTATTGTAATAACACACAGAGCTGTCTCCTaGCTGCCTTCCAATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GARGPVTPLHTQGFIVITHRAVS*LPSNHS Trigger: GCTGTGATTGGAAGGCAGCCAGGAGACAGCTCTGTG...TGTTATTACAATAAAACCTTGTGTGTGTAACGGCGTCACTGGCCCTCTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAGATGACACCAGGAGGTaGGGACACAGAGCTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGDDTRR*GHRAVS Trigger: GGAGACAGCTCTGTGTCCCCACCTCCTGGTGTCATC...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAGCACATCAGTCTGAGTaGCCTTTCTTCACTTCACGC | + |
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Preference number: 2 (lower is better) Translates to: GEREGGREGGKAPYFHFSAHQSE*PFFTSR Trigger: GCGTGAAGTGAAGAAAGGCCACTCAGACTGATGTGC...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTCCAATCACAGCACACTCAAGACAGAGGTGCTGACTGGTACAAAAGGAAATCCTCACGTTCCATaGTGGCGACCATACCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPSNHSTLKTEVLTGTKGNPHVP*WRPYPV Trigger: CACAGGGTATGGTCGCCAGCATGGAACGTGAGGATT...TCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAGGGAGCACATCAGTCTaGGTGGCCTTTCTTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGGSTSV*VAFLHF Trigger: GAAGTGAAGAAAGGCCACTCAGACTGATGTGCTCCC...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCAGAGGGCCAGTGACGCCGTTACACACACAAGGTTTTATTGTAATAACAGTGAGAATGGGGTGCTaGTGGACAGTGAGTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: GARGPVTPLHTQGFIVITVRMGC*WTVSSY Trigger: ATAGCTACTCACTGTCCAGCAGCACCCCATTCTCAC...TGTTATTACAATAAAACCTTGTGTGTGTAACGGCGTCACTGGCCCTCTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | CACTTGGGTATTGTGGGTAGAAAACAGCACAGGGGAACTGGGAAGTACTTGTTACCCGCACTACTGTTCTaGAAATCCAGCCGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HLGIVGRKQHRGTGKYLLPALLF*KSSRCS Trigger: AGAGCAGCGGCTGGATTTGCAGAACAGTAGTGCGGG...TAACAAGTACTTCCCAGTTCCCCTGTGCTGTTTTCTACCCACAATACCCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTCATCCCCCAGGATGCTaGGGACAGGTCACCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTHPPGC*GQVTQH Trigger: GTGCTGGGTGACCTGTCCTCAGCATCCTGGGGGATG...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAACACCACAACTCAGACATaGAAGCTATGCATCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FKSKVRVSSLHSSGRTRNTTTQT*KLCIPQ Trigger: CTGGGGGATGCATAGCTTTCATGTCTGAGTTGTGGT...GTTCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCGACAGAGGTGCTGACTaGTACAAAAGGAAGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ETGTQQSGNTSDALSVSSDRGAD*YKRKCG Trigger: ACCACACTTCCTTTTGTACCAGTCAGCACCTCTGTC...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATTCTTCAAGAGTAAAGTaGGTGTCTCATCACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: PHFLHKATLGLSVDGLFYSSRVK*VSHHST Trigger: TGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAGAGATAAATAAATACTaGACAAGGGCAACCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: GEREGGREGGKAPYFHFSEINKY*TRATQL Trigger: TAGCTGGGTTGCCCTTGTCCAGTATTTATTTATCTC...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGATCAAGACAGAGGTGCTaGCTGGTACAAAAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GREGRHHIFTFQRKMKLGSRQRC*LVQKEV Trigger: CACTTCCTTTTGTACCAGTCAGCACCTCTGTCTTGA...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCAGAGGGCCAGTGACGCCGTTACACACACAAGGTTTTATTGTAATAACATACATGGTGGCACATTaGTGGGAAATGATGAACACA | + |
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Preference number: 2 (lower is better) Translates to: GARGPVTPLHTQGFIVITYMVAH*WEMMNT Trigger: TGTGTTCATCATTTCCCAGCAATGTGCCACCATGTA...TGTTATTACAATAAAACCTTGTGTGTGTAACGGCGTCACTGGCCCTCTGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| 3UTR-3UTR CCA 90 bp | ATGATGAAACATCTAGATATTATGGCCCCGCACTACTGTTCTGCAAATCCAGCCAGAATGGGGTGCTGCTaGACAGTGAGTAGCTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: MMKHLDIMAPHYCSANPARMGCC*TVSSYQ Trigger: CTGATAGCTACTCACTGTCCAGCAGCACCCCATTCT...GGCTGGATTTGCAGAACAGTAGTGCGGGGCCATAATATCTAGATGTTTCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATGGGATTCTACAGGACTaGTTAAACAGAAACAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PHFLHKATLGLSVDGLFYGILQD*LNRNKG Trigger: ACCTTTGTTTCTGTTTAACCAGTCCTGTAGAATCCC...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGACTTTTCAAAGGAAGATaGAACTGGGACACAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGLFKGR*NWDTTV Trigger: GACTGTTGTGTCCCAGTTTCATCTTCCTTTGAAAAG...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCCAGAGGGCCAGTGACGCCGTTACACACACAAGGTTTTATTGTAATAACAGAAAGTGGGGTAACATaGTCTAACCAACAAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: GARGPVTPLHTQGFIVITESGVT*SNQQNQ Trigger: TTGGTTTTGTTGGTTAGACCATGTTACCCCACTTTC...TGTTATTACAATAAAACCTTGTGTGTGTAACGGCGTCACTGGCCCTCTGGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACAGCAAGGGTTTTTATCTaGGGAGAAAAGGAGGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EGGKAPYFHFSKEDETGTARVFI*GEKEGA Trigger: TGCTCCCTCCTTTTCTCCCCAGATAAAAACCCTTGC...TGTCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATATTGCACAAAACACTTaGGTATTGTGGGTAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PHFLHKATLGLSVDGLFYIAQNT*VLWVEN Trigger: GTTTTCTACCCACAATACCCAAGTGTTTTGTGCAAT...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CAA 90 bp | GGGGGTGGGGGAGGCAACATTAATATCTGTAATGACAGAGACTGCTaGGCAAAGTTTCCTAAGTCCGAAATGTGGTCTATTATGGATATG | + |
|
Preference number: 2 (lower is better) Translates to: GGGGGNINICNDRDC*AKFPKSEMWSIMDM Trigger: CATATCCATAATAGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCATTACAGATATTAATGTTGCCTCCCCCACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAACACCCATGGACACAAATaGACTTTAAAACCCAAACGT | + |
|
Preference number: 2 (lower is better) Translates to: FKSKVRVSSLHSSGRTRNTHGHK*TLKPKR Trigger: ACGTTTGGGTTTTAAAGTTCATTTGTGTCCATGGGT...GTTCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACAACTGAACCCTTTTCTTaGCCTGGTATATCCAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: EGGKAPYFHFSKEDETGTTEPFS*PGISRS Trigger: TGATCTGGATATACCAGGTCAAGAAAAGGGTTCAGT...TGTCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCCAAATTGGTCCCATTTaGATTCTTAAGCCATATACT | + |
|
Preference number: 2 (lower is better) Translates to: ETGTQQSGNTSDALSVSSQIGPI*ILKPYT Trigger: AGTATATGGCTTAAGAATGCAAATGGGACCAATTTG...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTATACCCTGTGAACAGTaGTCTATGAGGGTTCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTIPCEQ*SMRVPL Trigger: GAGAGGAACCCTCATAGATCACTGTTCACAGGGTAT...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTAACACTTGGGTATTGTaGGTAGAAAACAGCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTNTWVL*VENSTG Trigger: CCCTGTGCTGTTTTCTACCCACAATACCCAAGTGTT...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CAA 90 bp | TATTACCTGTTACATCAAAAGCAAAGCTTCCAAGCACTCGCACACTaGTCCTTAAAGCATGTTTACATCGTAGATAACTCCTTATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YYLLHQKQSFQALAH*SLKHVYIVDNSLCL Trigger: CAGGCATAAGGAGTTATCTACGATGTAAACATGCTTTAAGGACAAGTGTGCGAGTGCTTGGAAGCTTTGCTTTTGATGTAACAGGTAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTCCACAAAACCACCACTaGAATTTGGCACAATTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTPQNHH*NLAQLA Trigger: TGCTAATTGTGCCAAATTTCAGTGGTGGTTTTGTGG...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTGTACAAAAGGAAGTGTaGTTCTCCTTGTTCTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTVQKEV*FSLFFD Trigger: GTCAAAGAACAAGGAGAACCACACTTCCTTTTGTAC...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTACCCTTTTCTTGACCTaGTATATCCAGATCATAACC | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTTLFLT*YIQIIT Trigger: GGTTATGATCTGGATATACCAGGTCAAGAAAAGGGT...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTAATGGTTTCTACACATaGTGTAATTTCGTACCAACG | + |
|
Preference number: 2 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTNGFYT*CNFVPT Trigger: CGTTGGTACGAAATTACAGCATGTGTAGAAACCATT...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | AGCCTGCAGACGGCCGCGCAGACCAGCCCTCTGAGGTaGAGGGCTAATTCTGTCTGGACCTGCGCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLQTAAQTSPLR*RANSVWTCALP Trigger: GGGAAGGGCGCAGGTCCAGACAGAATTAGCCCTCCACCTCAGAGGGCTGGTCTGCGCGGCCGTCTGCAGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | CCTGCAGCCATGGAGCTGAGACAACCCCTGCTAAAGTaGAGCGCAGGGCGCCCCAGCGAGGACAGGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PAAMELRQPLLK*SAGRPSEDRTF Trigger: GAAGGTCCTGTCCTCGCTGGGGCGCCCTGCGCTGCACTTTAGCAGGGGTTGTCTCAGCTCCATGGCTGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | CCACGTGGGAGGACAGCAGAGCAGGGAGAGCGGGCCTaGAGCCATGGAGCTGAGACAACCCCTGCTAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PRGRTAEQGERA*SHGAETTPAKV Trigger: CACTTTAGCAGGGGTTGTCTCAGCTCCATGGCTGCAGGCCCGCTCTCCCTGCTCTGCTGTCCTCCCACGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | AGCCCTCTGAGGTGGAGGGCTAATTCTGTCTGGACCTaGGCCCTTCCCATAAGCGTCCTTACCCCACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPLRWRANSVWT*ALPISVLTPHH Trigger: GTGGTGTGGGGTAAGGACGCTTATGGGAAGGGCGCAGGTCCAGACAGAATTAGCCCTCCACCTCAGAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | GCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTaGCGGGGGAAAGGATTTCAGGTTAACTCTTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASRQGTSLCRAH*RGKGFQVNSSS Trigger: GCTTGAAGAGTTAACCTGAAATCCTTTCCCCCGTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | CAGGCTGCCCCTCCCTGTACTGTCCAGTGGTCGGTCTaGGAGCACATCAGTCTGAGTGGCCTTTCTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: QAAPPCTVQWSV*EHISLSGLSSL Trigger: AAGTGAAGAAAGGCCACTCAGACTGATGTGCTCCCAGACCGACCACTGGACAGTACAGGGAGGGGCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACTTCTTTGACACGAATTaGGCCCAAGACAAAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGTRQRAGRALVCAGHTDFFDTN*AQDKKP Trigger: AGGCTTTTTGTCTTGGGCCAAATTCGTGTCAAAGAA...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | TGTCCAGTGGTCGGTCTGGGAGCACATCAGTCTGAGTaGCCTTTCTTCACTTCACGCTATGACATAACGGCG | + |
|
Preference number: 3 (lower is better) Translates to: CPVVGLGAHQSE*PFFTSRYDITA Trigger: CGCCGTTATGTCATAGCGTGAAGTGAAGAAAGGCCACTCAGACTGATGTGCTCCCAGACCGACCACTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TCACGTTCCATGCTGGCGACCATACCCTGTGAACAGTaGTCTATGAGGGTTCCTCTCAGGGCCCAGAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SRSMLATIPCEQ*SMRVPLRAQSY Trigger: ATAACTCTGGGCCCTGAGAGGAACCCTCATAGATCACTGTTCACAGGGTATGGTCGCCAGCATGGAACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | CCAAAGACCAAAGGGGAAACTGAAGCTCCATGGGACTaGATGGCACGAGTGTCTGCAGACACATGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PKTKGETEAPWD*MARVSADTCVL Trigger: CAGCACACATGTGTCTGCAGACACTCGTGCCATTCAGTCCCATGGAGCTTCAGTTTCCCCTTTGGTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | GCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATTaGCATGCTACAGGGTGTCTGACATTGGCACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: ATLGLSVDGLFY*HATGCLTLALM Trigger: CATCAGTGCCAATGTCAGACACCCTGTAGCATGGCAATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | AGACCAAAGGGGAAACTGAAGCTCCATGGGACTGAATaGCACGAGTGTCTGCAGACACATGTGTGCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPKGKLKLHGTE*HECLQTHVCCQ Trigger: CTGACAGCACACATGTGTCTGCAGACACTCGTGCCATTCAGTCCCATGGAGCTTCAGTTTCCCCTTTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCCAGAGGGCCAGTGACGCCGTTACACACACAAGGTTTTATTGTAATAACAGATTTGCCCGTCTTCTaGGAGGGAGAGAGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GARGPVTPLHTQGFIVITDLPVF*EGERKG Trigger: TCCCTTCCTCTCTCCCTCCAAGAAGACGGGCAAATC...TGTTATTACAATAAAACCTTGTGTGTGTAACGGCGTCACTGGCCCTCTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | TATAAAGGAGCTAGTGTAGACATGAAGAGGAGGCACTaGATCTTCGCTCTGAACGCCTTGCGGAGAAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: YKGASVDMKRRH*IFALNALRRRT Trigger: CGTCCTTCTCCGCAAGGCGTTCAGAGCGAAGATGCAGTGCCTCCTCTTCATGTCTACACTAGCTCCTTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | ACTCGGCCTCAGTGTAGACGGTCTGTTTTATTGCCATaGTACAGGGTGTCTGACATTGGCACTGATGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TRPQCRRSVLLP*YRVSDIGTDGV Trigger: TACCCCATCAGTGCCAATGTCAGACACCCTGTAGCATGGCAATAAAACAGACCGTCTACACTGAGGCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TACAAGGTAAGACAACCCAAAGACCAAAGGGGAAACTaGAGCTCCATGGGACTGAATGGCACGAGTGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YKVRQPKDQRGN*SSMGLNGTSVC Trigger: GCAGACACTCGTGCCATTCAGTCCCATGGAGCTTCAGTTTCCCCTTTGGTCTTTGGGTTGTCTTACCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCGGTTCTCCTTGTTCTTaGACACGAATTTGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETGTQQSGNTSDALSVSSGSPCS*TRIWPK Trigger: CTTGGGCCAAATTCGTGTCAAAGAACAAGGAGAACC...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TGCCTTCCAATCACAGCACACTCAAGACAGAGGTGCTaGCTGGTACAAAAGGAAGTGTGGTTCTCCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CLPITAHSRQRC*LVQKEVWFSLF Trigger: GAACAAGGAGAACCACACTTCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAGTATCCACTATTCTCTaGAAGAGAACAGCAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: GEREGGREGGKAPYFHFSVSTIL*KRTANI Trigger: AATGTTTGCTGTTCTCTTCAAGAGAATAGTGGATAC...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCATTCTTAGCAGACAAATaGGTCCCATTTGCATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GEREGGREGGKAPYFHFSFLADK*VPFAFL Trigger: TAAGAATGCAAATGGGACCAATTTGTCTGCTAAGAA...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATACAGACAAACACAGTTaGACTTACAACATAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PHFLHKATLGLSVDGLFYTDKHS*TYNIVW Trigger: CCACACTATGTTGTAAGTCAAACTGTGTTTGTCTGT...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | CGCAGAGGGAAAGGAAAGGAAGCGTCTGCTATGCTATaGAGCAATGGCGCTGAAGATGATGAAACATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRGKGKEASAML*SNGAEDDETSR Trigger: TCTAGATGTTTCATCATCTTCAGCGCCATTGCTTCATAGCATAGCAGACGCTTCCTTTCCTTTCCCTCTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | GGGAACTGGGAAGTACTTGTTAGCTTGTTAAACCTTTaGCTTGAGGCAAATACATGGTGGCACATTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GNWEVLVSLLNL*LEANTWWHIAG Trigger: CCCAGCAATGTGCCACCATGTATTTGCCTCAAGGCAAAGGTTTAACAAGCTAACAAGTACTTCCCAGTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATTTTCGTACCAACGTCTaGATTCTAATTTGGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PHFLHKATLGLSVDGLFYFRTNV*ILIWQT Trigger: TGTTTGCCAAATTAGAATCAAGACGTTGGTACGAAA...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TCAGATTTGATTCCACAGAGCAGTTTTCCTGAACGCTaGAGGTCAGTGTGTGTCAGCTCAGCTTCAGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SDLIPQSSFPER*RSVCVSSASVS Trigger: TGATACTGAAGCTGAGCTGACACACACTGACCTTCAGCGTTCAGGAAAACTGCTCTGTGGAATCAAATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | TTCCAATCACAGCACACTCAAGACAGAGGTGCTGACTaGTACAAAAGGAAGTGTGGTTCTCCTTGTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FQSQHTQDRGAD*YKRKCGSPCSL Trigger: CAAAGAACAAGGAGAACCACACTTCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGAGAAGTGTGGTTCTCCTaGTTCTTTGACACGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: GREGRHHIFTFQRKMKLGEVWFS*FFDTNL Trigger: CAAATTCGTGTCAAAGAACAAGGAGAACCACACTTC...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | GGGGGAGGCAACATTAATATCTGTAATGACAGAGACTaGTTGGCAAAGTTTCCTAAGTCCGAAATGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGGNINICNDRD*LAKFPKSEMWS Trigger: AGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCATTACAGATATTAATGTTGCCTCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | GAGACGACTGTAAAGGACACAGGGATTCTACAGGACTaGTTAAACAGAAACAAAGGTGGTTTCCAGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: ETTVKDTGILQD*LNRNKGGFQKI Trigger: TATCTTCTGGAAACCACCTTTGTTTCTGTTTAACCAGTCCTGTAGAATCCCTGTGTCCTTTACAGTCGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | ACTGGTACAAAAGGAAGTGTGGTTCTCCTTGTTCTTTaGCACGAATTTGGCCCAAGACAAAAAGCCTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TGTKGSVVLLVL*HEFGPRQKAFN Trigger: GTTAAAGGCTTTTTGTCTTGGGCCAAATTCGTGTCAAAGAACAAGGAGAACCACACTTCCTTTTGTACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | AATAAGGGAGAAGTGACCATAAGAACTCATCAGATTTaGTTCCACAGAGCAGTTTTCCTGAACGCTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NKGEVTIRTHQI*FHRAVFLNAEG Trigger: ACCTTCAGCGTTCAGGAAAACTGCTCTGTGGAATCAAATCTGATGAGTTCTTATGGTCACTTCTCCCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TCTATTATGGATATGCTGAGAAGTGAGTCTTTTTGCTaGGTCTTCAAGAGTAAAGTGCGTGTCTCATCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SIMDMLRSESFC*VFKSKVRVSSL Trigger: GAGTGATGAGACACGCACTTTACTCTTGAAGACTCAGCAAAAAGACTCACTTCTCAGCATATCCATAATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | CTGGGAAATGATGAACACATAAGGCCCCGTCCCATTTaGAATAGAACTTTAGTGAGGTACATTTTATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGNDEHIRPRPI*NRTLVRYILYA Trigger: AGCATATAAAATGTACCTCACTAAAGTTCTATTGCAAATGGGACGGGGCCTTATGTGTTCATCATTTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | AGAGACTGCTTGGCAAAGTTTCCTAAGTCCGAAATGTaGTCTATTATGGATATGCTGAGAAGTGAGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDCLAKFPKSEM*SIMDMLRSESF Trigger: AAAAGACTCACTTCTCAGCATATCCATAATAGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTTATCTCATATACAATTaGGCAATGGTAGTCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTYLIYN*AMVVPL Trigger: CAGTGGGACTACCATTGCCAAATTGTATATGAGATA...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTCCAGTTAATAAAGGCTaGATTGTACTTCAAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTPVNKG*IVLQGL Trigger: GAGTCCTTGAAGTACAATCAAGCCTTTATTAACTGG...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR TCA 72 bp | TTCCTAAGTCCGAAATGTGGTCTATTATGGATATGCTaGGAAGTGAGTCTTTTTGCTGAGTCTTCAAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLSPKCGLLWIC*EVSLFAESSRV Trigger: TACTCTTGAAGACTCAGCAAAAAGACTCACTTCTCAGCATATCCATAATAGACCACATTTCGGACTTAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | AGTAGCTATCAGGAGATTAGTGTTCTAAGGAGTGCCTaGTCTGCATCAATTCCCTTTAAAGATGAAATATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSYQEISVLRSA*SASIPFKDEIF Trigger: GAATATTTCATCTTTAAAGGGAATTGATGCAGAGCAGGCACTCCTTAGAACACTAATCTCCTGATAGCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CCA 72 bp | GAGGCAACATTAATATCTGTAATGACAGAGACTGCTTaGCAAAGTTTCCTAAGTCCGAAATGTGGTCTATTA | + |
|
Preference number: 3 (lower is better) Translates to: EATLISVMTETA*QSFLSPKCGLL Trigger: TAATAGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCATTACAGATATTAATGTTGCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR GCA 72 bp | AAAGGACGAATGGAACAGTGTATTAAATATGTAAACTaGACATGTATCCACTATTCTCTTGAAGAGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KGRMEQCIKYVN*TCIHYSLEENS Trigger: GCTGTTCTCTTCAAGAGAATAGTGGATACATGTGCAGTTTACATATTTAATACACTGTTCCATTCGTCCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACGCTCTGTGCGCCGCGTaGGGGTTTGCGGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTRQRAGRALVCAGHTDALCAA*GFAGGE Trigger: CTCCCCTCCCGCAAACCCCCACGCGGCGCACAGAGC...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACCATCTTCATCCCTACTaGGCTTGCGGGCTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTRQRAGRALVCAGHTDHLHPY*ACGLPK Trigger: TTTGGGAAGCCCGCAAGCTCAGTAGGGATGAAGATG...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACGGTTGTCAGAGTCACTaGCCCCTTCCAAATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRQRAGRALVCAGHTDGCQSH*PLPNPP Trigger: AGGTGGATTTGGAAGGGGGCAGTGACTCTGACAACC...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACACTCGGCTCTTCTTTTaGTGTGTTGCTCTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRQRAGRALVCAGHTDTRLFF*CVALSI Trigger: AATGCTGAGAGCAACACACCAAAAGAAGAGCCGAGT...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | CCACACTTCCTCCACAAAGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATCATACACCAGTTTGTTaGCAGGGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFLHKATLGLSVDGLFYHTPVC*QGAHLC Trigger: GCAGAGATGTGCCCCCTGTCAACAAACTGGTGTATG...ATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCTTTGTGGAGGAAGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | CACTTGGGTATTGTGGGTAGAAAACAGCACAGGGGAACTGGGAAGTACTTGTTATCAGACGACCTCTCCTaGCCCCTGAGGCACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGIVGRKQHRGTGKYLLSDDLS*PLRHWE Trigger: TTCCCAGTGCCTCAGGGGTCAGGAGAGGTCGTCTGA...TAACAAGTACTTCCCAGTTCCCCTGTGCTGTTTTCTACCCACAATACCCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCATCTGCGCTGAGTTGTTaGTATTCTGGGTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEREGGREGGKAPYFHFSSALSC*YSGCLR Trigger: CCTCAGACACCCAGAATATCAACAACTCAGCGCAGA...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACTTCCCACCGAAGGATaGCGGCTTGAGGGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GREGRHHIFTFQRKMKLGLPTEG*RLEGWD Trigger: ATCCCACCCCTCAAGCCGGCATCCTTCGGTGGGAAG...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | AGACACACCGAGAGATCAGGGGTAGACTTTCAAATGCTTTTGGGTAAAGTGACCCTGAGCACCGAGCCCTaGAGTTGTAGGTGTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHTERSGVDFQMLLGKVTLSTEP*SCRCPR Trigger: CCTCGGACACCTACAACTCCAGGGCTCGGTGCTCAG...GGTCACTTTACCCAAAAGCATTTGAAAGTCTACCCCTGATCTCTCGGTGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAATTCCTTGTCCAGTCTaGCACCTTCGACCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEREGGREGGKAPYFHFSIPCPV*HLRPLS Trigger: TGAAAGTGGTCGAAGGTGTCAGACTGGACAAGGAAT...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAGGGTCTTTTCCCAGTTaGTCCAGTTTCTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEREGGREGGKAPYFHFSGSFPS*SSFSFS Trigger: GGAAAAGGAGAAACTGGAGCAACTGGGAAAAGACCC...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CAA 72 bp | AGCCACACTCGGCCTCAGTGTAGACGGTCTGTTTTATaGCCATGCTACAGGGTGTCTGACATTGGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHTRPQCRRSVL*PCYRVSDIGTD Trigger: ATCAGTGCCAATGTCAGACACCCTGTAGCATGGCAATAAAACAGACCGTCTACACTGAGGCCGAGTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGATCAGCTCTGTGTCTGTaGGTTCCATCACACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGSALCL*VPSHQS Trigger: GCTCTGGTGTGATGGAACTCACAGACACAGAGCTGA...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGATCCACTCCCACTGACTaGGTCTTTTCCCAGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGSTPTD*VFSQLL Trigger: GAGCAACTGGGAAAAGACCCAGTCAGTGGGAGTGGA...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAGAGTTGTTGATATTCTaGGTGTCTGAGGTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEREGGREGGKAPYFHFSELLIF*VSEVLV Trigger: TACCAGCACCTCAGACACCCAGAATATCAACAACTC...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCAGTGGTCGGCGTTTTTaGAGTCTGAGGGTTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETGTQQSGNTSDALSVSSSGRRF*SLRVVR Trigger: TCTGACAACCCTCAGACTCCAAAAACGCCGACCACT...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACCATTAGGTAAGTTCTaGGCACCGAGCCCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GREGRHHIFTFQRKMKLGPLGKF*APSPGV Trigger: AACTCCAGGGCTCGGTGCTCAGAACTTACCTAATGG...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCAGGTCTTCTCTGCGCTaGGTTGTTGATATTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETGTQQSGNTSDALSVSSRSSLR*VVDILG Trigger: ACCCAGAATATCAACAACTCAGCGCAGAGAAGACCT...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | CACTTGGGTATTGTGGGTAGAAAACAGCACAGGGGAACTGGGAAGTACTTGTTAGGCGTTTTTGGAGTCTaGGGGTTGTCAGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLGIVGRKQHRGTGKYLLGVFGV*GLSESL Trigger: CAGTGACTCTGACAACCCTCAGACTCCAAAAACGCC...TAACAAGTACTTCCCAGTTCCCCTGTGCTGTTTTCTACCCACAATACCCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCATATTTTGTGAGCACTTaGCGGCACTGTTACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEREGGREGGKAPYFHFSYFVST*RHCYIL Trigger: GAGAATGTAACAGTGCCGGCAAGTGCTCACAAAATA...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGAAGAAACCCTTGCCTCTaGGGGAACATGCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GREGRHHIFTFQRKMKLGRNPCL*GNMHTC Trigger: GCAAGTGTGCATGTTCCCCCAGAGGCAAGGGTTTCT...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR TCA 90 bp | AGACACACCGAGAGATCAGGGGTAGACTTTCAAATGCTTTTGGGTAAAGTGACCGATATTCTGGGTGTCTaGGGTGCTGGTAGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHTERSGVDFQMLLGKVTDILGV*GAGRCQ Trigger: CTGACATCTACCAGCACCTCAGACACCCAGAATATC...GGTCACTTTACCCAAAAGCATTTGAAAGTCTACCCCTGATCTCTCGGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | CTGCCTTCCAATCACAGCACACTCAAGACAGAGGTGCTGACTGGTACAAAAGGATCCTTTTCCATTAACTaGTTCTGGACAGGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSNHSTLKTEVLTGTKGSFSIN*FWTGVG Trigger: ACCAACCCCTGTCCAGAAGCAGTTAATGGAAAAGGA...TCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | ATGATGAAACATCTAGATATTATGGCCCCGCACTACTGTTCTGCAAATCCAGCCCGAGGCAGCGCTTTCTaGAAGTTGGACATAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MMKHLDIMAPHYCSANPARGSAF*KLDIAA Trigger: TGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCTCG...GGCTGGATTTGCAGAACAGTAGTGCGGGGCCATAATATCTAGATGTTTCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACAAGCATTAGAAACCCTTaGCTCTGGGGGAACATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGGKAPYFHFSKEDETGTSIRNP*LWGNMH Trigger: GTGCATGTTCCCCCAGAGGCAAGGGTTTCTAATGCT...TGTCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTCAGGGGGCACATCTCTaGGCTCGTCACTGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTQGAHL*ARHCHS Trigger: GCTATGACAGTGACGAGCGCAGAGATGTGCCCCCTG...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | TTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAACGACAGTGTCTTTATCTaGACAGCTACAACAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: FKSKVRVSSLHSSGRTRNDSVFI*TATTAT Trigger: GGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTC...GTTCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTTATTGCGATCTACTTTTGGCAATAAGGGAGAAGTGACCATAAGAACTTTTGCGGGAGGGGAGTaGTCGGCGTTTTTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLLRSTFGNKGEVTIRTFAGGE*SAFLES Trigger: AGACTCCAAAAACGCCGACCACTCCCCTCCCGCAAA...AGTTCTTATGGTCACTTCTCCCTTATTGCCAAAAGTAGATCGCAATAAAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACAAGGTCAGTACTATTGTaGCTCGTCTTCCGAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGGKAPYFHFSKEDETGTRSVLL*LVFRDV Trigger: TACATCTCGGAAGACGAGGCACAATAGTACTGACCT...TGTCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | ATGATGAAACATCTAGATATTATGGCCCCGCACTACTGTTCTGCAAATCCAGCCGTTCCGATGGTTATCTaGGACAGTGTCTTTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MMKHLDIMAPHYCSANPAVPMVI*DSVFIW Trigger: CCAGATAAAGACACTGTCCCAGATAACCATCGGAAC...GGCTGGATTTGCAGAACAGTAGTGCGGGGCCATAATATCTAGATGTTTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CCA 90 bp | ATGATGAAACATCTAGATATTATGGCCCCGCACTACTGTTCTGCAAATCCAGCCTTAAACTTGTTCCGATaGTTATCTGGGACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MMKHLDIMAPHYCSANPALNLFR*LSGTVS Trigger: AGACACTGTCCCAGATAACCATCGGAACAAGTTTAA...GGCTGGATTTGCAGAACAGTAGTGCGGGGCCATAATATCTAGATGTTTCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CAA 72 bp | GGAGGCAACATTAATATCTGTAATGACAGAGACTGCTaGGCAAAGTTTCCTAAGTCCGAAATGTGGTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: GGNINICNDRDC*AKFPKSEMWSI Trigger: AATAGACCACATTTCGGACTTAGGAAACTTTGCCAAGCAGTCTCTGTCATTACAGATATTAATGTTGCCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| 3UTR CAA 72 bp | TTACATCAAAAGCAAAGCTTCCAAGCACTCGCACACTaGTCCTTAAAGCATGTTTACATCGTAGATAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQKQSFQALAH*SLKHVYIVDNS Trigger: GGAGTTATCTACGATGTAAACATGCTTTAAGGACAAGTGTGCGAGTGCTTGGAAGCTTTGCTTTTGATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CAA 90 bp | TTGGGAACCAGGCAGCGAGCCGGCAGGGCACTAGTCTGTGCAGGGCACACTGACGCGCCGCGTGGGGGTTaGCGGGAGGGGAGTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTRQRAGRALVCAGHTDAPRGG*REGSGR Trigger: CCGACCACTCCCCTCCCGCAAACCCCCACGCGGCGC...GTCAGTGTGCCCTGCACAGACTAGTGCCCTGCCGGCTCGCTGCCTGGTTCCCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS GCA 90 bp | TGCCTCGTCTTCCGAGATGTACCGTCGTCTCGAGGCAGCGCTTTCTaGAAGTTGGACATAGCAGCAGTTCTCTCAATGTCTATCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CLVFRDVPSSRGSAF*KLDIAAVLSMSITA Trigger: CGCTGTGATAGACATTGAGAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCTCGAGACGACGGTACATCTCGGAAGACGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAAGGCTTAAGAAGCACTaGCGGGTCCCTGTCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGRLKKH*RVPVLG Trigger: CCCGAGGACAGGGACCCGCAAGTGCTTCTTAAGCCT...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCACTCTGCGCTGAGTTGTaGATATTCTGGGTGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GEREGGREGGKAPYFHFSLCAEL*IFWVSE Trigger: CTCAGACACCCAGAATATCAACAACTCAGCGCAGAG...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS-3UTR CAA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCTCATCCCTACTGAGCTaGCGGGCTTCCCAAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETGTQQSGNTSDALSVSSSSLLS*RASQTG Trigger: TCCTGTTTGGGAAGCCCGCAAGCTCAGTAGGGATGA...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
||
| CDS TCA 90 bp | TTACCGAGTCCCGTTTCCGGGTGTACAGAATCAGCTCTGTGTCTGTaGGTTCCATCACACCAGAGCCTAGCTCATTCCCATCATCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPVSGCTESALCL*VPSHQSLAHSHHHP Trigger: TGGATGATGATGGGAATGAGCTAGGCTCTGGTGTGATGGAACTCACAGACACAGAGCTGATTCTGTACACCCGGAAACGGGACTCGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | AGACACACCGAGAGATCAGGGGTAGACTTTCAAATGCTTTTGGGTAAAGTGACCGAGTGGTCGGCGTTTTaGGAGTCTGAGGGTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RHTERSGVDFQMLLGKVTEWSAF*ESEGCQ Trigger: CTGACAACCCTCAGACTCCAAAAACGCCGACCACTC...GGTCACTTTACCCAAAAGCATTTGAAAGTCTACCCCTGATCTCTCGGTGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAACATAAGTATGTACTaGTTCCTCAGCCACGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GEREGGREGGKAPYFHFSNISMY*FLSHEQ Trigger: TTGCTCGTGGCTGAGGAACAAGTACATACTTATGTT...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAAGGCACCATATTTTCACTTTTCACAAAAGAAAACAGATTaGAGTCATAGCCGTATCGTC | + |
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Preference number: 5 (lower is better) Translates to: GEREGGREGGKAPYFHFSQKKTD*SHSRIV Trigger: GACGATACGGCTATGACTCAAATCTGTTTTCTTTTG...TGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | AGACACACCGAGAGATCAGGGGTAGACTTTCAAATGCTTTTGGGTAAAGTGACCTCATACACCAGTTTGTaGACAGGGGGCACATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RHTERSGVDFQMLLGKVTSYTSL*TGGTSL Trigger: CAGAGATGTGCCCCCTGTCAACAAACTGGTGTATGA...GGTCACTTTACCCAAAAGCATTTGAAAGTCTACCCCTGATCTCTCGGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGACTTCTCTGCGCTGAGTaGTTGATATTCTGGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSRVKCVSHHSTAVGEQGLLCAE*LIFWVS Trigger: AGACACCCAGAATATCAACAACTCAGCGCAGAGAAG...TCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GGGAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGAAGCGCTTTCTGCAAGTaGGACATAGCAGCAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GREGRHHIFTFQRKMKLGSAFCK*DIAAVL Trigger: GAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCT...TCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCAAAAGCAAAAATTCCTaGTCCAGTCTGACACCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ETGTQQSGNTSDALSVSSKSKNS*SSLTPS Trigger: CGAAGGTGTCAGACTGGACAAGGAATTTTTGCTTTT...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | AGACACACCGAGAGATCAGGGGTAGACTTTCAAATGCTTTTGGGTAAAGTGACCTGGGTCTTTTCCCAGTaGCTCCAGTTTCTCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RHTERSGVDFQMLLGKVTWVFSQ*LQFLLF Trigger: GAAAAGGAGAAACTGGAGCAACTGGGAAAAGACCCA...GGTCACTTTACCCAAAAGCATTTGAAAGTCTACCCCTGATCTCTCGGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GAAACTGGGACACAACAGTCAGGAAACACTAGTGATGCCCTATCAGTCTCCAGCTTAATGACCTTAAACTaGTTCCGATGGTTATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ETGTQQSGNTSDALSVSSLMTLN*FRWLSG Trigger: CCCAGATAACCATCGGAACAAGTTTAAGGTCATTAA...GCTGGAGACTGATAGGGCATCACTAGTGTTTCCTGACTGTTGTGTCCCAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | TTCAAGAGTAAAGTGCGTGTCTCATCACTCCACAGCAGTGGGAGAACAAGGAACGTCTTTGGTCCTAAATaGTCATCTTCATCCCTACTG | + |
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Preference number: 5 (lower is better) Translates to: FKSKVRVSSLHSSGRTRNVFGPK*SSSSLL Trigger: CAGTAGGGATGAAGATGACAATTTAGGACCAAAGAC...GTTCCTTGTTCTCCCACTGCTGTGGAGTGATGAGACACGCACTTTACTCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | CTGCCTTCCAATCACAGCACACTCAAGACAGAGGTGCTGACTGGTACAAAAGGATTAGAGATGGGGTCTTaGGTCCTAAATTGTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LPSNHSTLKTEVLTGTKGLEMGS*VLNCHL Trigger: AAGATGACAATTTAGGACCAAAGACCCCATCTCTAA...TCCTTTTGTACCAGTCAGCACCTCTGTCTTGAGTGTGCTGTGATTGGAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS TCA 90 bp | TTAGAGATGGGGTCTTTGGTCCTAAATTGTCATCTTCATCCCTACTaGGCTTGCGGGCTTCCCAAACAGGAGGCAAAGATGGTAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LEMGSLVLNCHLHPY*ACGLPKQEAKMVNF Trigger: AAAATTTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTCAGTAGGGATGAAGATGACAATTTAGGACCAAAGACCCCATCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS-3UTR CAA 90 bp | GAGGGAGGGAAGGCACCATATTTTCACTTTTCAAAGGAAGATGAAACTGGGACATTTTCATACACCAGTTaGTTGACAGGGGGCACATCT | + |
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Preference number: 5 (lower is better) Translates to: EGGKAPYFHFSKEDETGTFSYTS*LTGGTS Trigger: AGATGTGCCCCCTGTCAACAAACTGGTGTATGAAAA...TGTCCCAGTTTCATCTTCCTTTGAAAAGTGAAAATATGGTGCCTTCCCTCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | CAGTTCTCTCAATGTCTATCACAGCGTACAGCTCTGTaGGCCGCGTGGGGGTTTGCGGGAGGGGAGTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: QFSQCLSQRTAL*AAWGFAGGEWS Trigger: CGACCACTCCCCTCCCGCAAACCCCCACGCGGCGCACAGAGCTGTACGCTGTGATAGACATTGAGAGAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS TCA 72 bp | CGGTGTCCCACTCCGTGTTGCCCGCTCCACTCCCACTaGCTGGGTCTTTTCCCAGTTGCTCCAGTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RCPTPCCPLHSH*LGLFPVAPVSP Trigger: AGGAGAAACTGGAGCAACTGGGAAAAGACCCAGTCAGTGGGAGTGGAGCGGGCAACACGGAGTGGGACACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | CCGACTGAAGGTAAGCGAGCACTTCCCACCGAAGGATaGCGGCTTGAGGGGTGGGATGAAGCGTCTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PTEGKRALPTEG*RLEGWDEASPN Trigger: GTTTGGAGACGCTTCATCCCACCCCTCAAGCCGGCATCCTTCGGTGGGAAGTGCTCGCTTACCTTCAGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | AGCACAAACCTGACTCCTTCAGGCTTAAGAAGCACTTaGGGGTCCCTGTCCTCGGGGTTACTCGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: STNLTPSGLRST*GSLSSGLLGSS Trigger: AGAAGAGCCGAGTAACCCCGAGGACAGGGACCCGCAAGTGCTTCTTAAGCCTGAAGGAGTCAGGTTTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CCA 72 bp | CGGGTCCCTGTCCTCGGGGTTACTCGGCTCTTCTTTTaGTGTGTTGCTCTCAGCATTAGAAACCCTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RVPVLGVTRLFF*CVALSIRNPCL Trigger: GAGGCAAGGGTTTCTAATGCTGAGAGCAACACACCAAAAGAAGAGCCGAGTAACCCCGAGGACAGGGACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS TCA 72 bp | CCCGTTTCCGGGTGTACAGAATCAGCTCTGTGTCTGTaGGTTCCATCACACCAGAGCCTAGCTCATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: PVSGCTESALCL*VPSHQSLAHSH Trigger: ATGGGAATGAGCTAGGCTCTGGTGTGATGGAACTCACAGACACAGAGCTGATTCTGTACACCCGGAAACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 90 bp | GTCTTCCGAGATGTACCGTCGTCTCGAGGCAGCGCTTTCTGCAAGTaGGACATAGCAGCAGTTCTCTCAATGTCTATCACAGCGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: VFRDVPSSRGSAFCK*DIAAVLSMSITAYS Trigger: GCTGTACGCTGTGATAGACATTGAGAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCTCGAGACGACGGTACATCTCGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | TTCCGAGATGTACCGTCGTCTCGAGGCAGCGCTTTCTaGAAGTTGGACATAGCAGCAGTTCTCTCAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: FRDVPSSRGSAF*KLDIAAVLSMS Trigger: AGACATTGAGAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCTCGAGACGACGGTACATCTCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CCA 72 bp | TATGTACTTGTTCCTCAGCCACGAGCAAAGGGTGTGTaGACTCTTCACCGACTGAAGGTAAGCGAGCACTTC | + |
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Preference number: 6 (lower is better) Translates to: YVLVPQPRAKGV*TLHRLKVSEHF Trigger: GAAGTGCTCGCTTACCTTCAGTCGGTGAAGAGTCCACACACCCTTTGCTCGTGGCTGAGGAACAAGTACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CCA 72 bp | AGTGCAGGTCTTCTCTGCGCTGAGTTGTTGATATTCTaGGTGTCTGAGGTGCTGGTAGATGTCAGACGACCT | + |
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Preference number: 6 (lower is better) Translates to: SAGLLCAELLIF*VSEVLVDVRRP Trigger: AGGTCGTCTGACATCTACCAGCACCTCAGACACCCAGAATATCAACAACTCAGCGCAGAGAAGACCTGCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS TCA 72 bp | GGGTCTTTGGTCCTAAATTGTCATCTTCATCCCTACTaGGCTTGCGGGCTTCCCAAACAGGAGGCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: GSLVLNCHLHPY*ACGLPKQEAKM Trigger: CATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTCAGTAGGGATGAAGATGACAATTTAGGACCAAAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 72 bp | GATGTACCGTCGTCTCGAGGCAGCGCTTTCTGCAAGTaGGACATAGCAGCAGTTCTCTCAATGTCTATCACA | + |
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Preference number: 6 (lower is better) Translates to: DVPSSRGSAFCK*DIAAVLSMSIT Trigger: TGTGATAGACATTGAGAGAACTGCTGCTATGTCCAACTTGCAGAAAGCGCTGCCTCGAGACGACGGTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | TTCTTTTGGTGTGTTGCTCTCAGCATTAGAAACCCTTaGCTCTGGGGGAACATGCACACTTGCACGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FFWCVALSIRNP*LWGNMHTCTVF Trigger: AAAAACCGTGCAAGTGTGCATGTTCCCCCAGAGGCAAGGGTTTCTAATGCTGAGAGCAACACACCAAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 72 bp | GGAATAGATAGCCCGTTTATATTTTCATACACCAGTTaGTTGACAGGGGGCACATCTCTGCGCTCGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: GIDSPFIFSYTS*LTGGTSLRSSL Trigger: CAGTGACGAGCGCAGAGATGTGCCCCCTGTCAACAAACTGGTGTATGAAAATATAAACGGGCTATCTATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 72 bp | ATAGATAGCCCGTTTATATTTTCATACACCAGTTTGTaGACAGGGGGCACATCTCTGCGCTCGTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: IDSPFIFSYTSL*TGGTSLRSSLS Trigger: TGACAGTGACGAGCGCAGAGATGTGCCCCCTGTCAACAAACTGGTGTATGAAAATATAAACGGGCTATCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 72 bp | TTTGGTCCTAAATTGTCATCTTCATCCCTACTGAGCTaGCGGGCTTCCCAAACAGGAGGCAAAGATGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: FGPKLSSSSLLS*RASQTGGKDGK Trigger: TTTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTCAGTAGGGATGAAGATGACAATTTAGGACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS CAA 72 bp | TCTGACACCTTCGACCACTTTCAAAAGAAAACAGATTaGAGTCATAGCCGTATCGTCGTAGGCAGAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SDTFDHFQKKTD*SHSRIVVGRGS Trigger: ACTACCTCTGCCTACGACGATACGGCTATGACTCAAATCTGTTTTCTTTTGAAAGTGGTCGAAGGTGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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| CDS GCA 72 bp | ATCCCTGCGCTTCGAATAGTCTATTTTGTGAGCACTTaGCGGCACTGTTACATTCTCTGTATTAACATAGTT | + |
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Preference number: 6 (lower is better) Translates to: IPALRIVYFVST*RHCYILCINIV Trigger: AACTATGTTAATACAGAGAATGTAACAGTGCCGGCAAGTGCTCACAAAATAGACTATTCGAAGCGCAGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020381.5 |
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