Pregenerated sensors for FRRS1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045589Ensembl transcript IDs: ENSMUST00000053681.6, ENSMUST00000128276.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCAGCAGGTAGAAGGTCAGGGCGACAATGAGAAGCAGACAAAATaGCGAGGAGAAGGTCTGGTAGGCAGCCGACGGCATGAAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: HQQVEGQGDNEKQTK*RGEGLVGSRRHENV Trigger: GACATTTTCATGCCGTCGGCTGCCTACCAGACCTTCTCCTCGCCATTTTGTCTGCTTCTCATTGTCGCCCTGACCTTCTACCTGCTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | GATACTGAAGGGTTTTCACTCCATCTAGTCTGTGGCTGGCAGCGGTaGTTAAGGGGTTCCCATCAGCAGGTAGAAGGTCAGGGCGACAAT | + |
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Preference number: 1 (lower is better) Translates to: DTEGFSLHLVCGWQR*LRGSHQQVEGQGDN Trigger: ATTGTCGCCCTGACCTTCTACCTGCTGATGGGAACCCCTTAACCACCGCTGCCAGCCACAGACTAGATGGAGTGAAAACCCTTCAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR TCA 90 bp | CGGCATGAAAATGTCTTCGTACTTGTAAATACTGACAACGCGCTCTaGAGCCGGTGGAGAGTCTATGTCGTGACGAGTGATGGCGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: RHENVFVLVNTDNAL*SRWRVYVVTSDGAL Trigger: CAGGGCGCCATCACTCGTCACGACATAGACTCTCCACCGGCTTCAGAGCGCGTTGTCAGTATTTACAAGTACGAAGACATTTTCATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | TGGCTGCCAGACCTCAGGCAAAACAAAGCTGTTGCTTACCGAGACTaGTTCCTCACTGTTACCTCTTTTGTGCCGACTCCAGGAGACACA | + |
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Preference number: 1 (lower is better) Translates to: WLPDLRQNKAVAYRD*FLTVTSFVPTPGDT Trigger: TGTGTCTCCTGGAGTCGGCACAAAAGAGGTAACAGTGAGGAACCAGTCTCGGTAAGCAACAGCTTTGTTTTGCCTGAGGTCTGGCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR GCA 90 bp | GAAAACTCCTTCTTCATCTCGGGCAGGATTTCTCTGAACCTCCTTTaGCCACTGACCCACATTATAGAAGTGCTGTATGCGGACTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ENSFFISGRISLNLL*PLTHIIEVLYADSA Trigger: GGCAGAGTCCGCATACAGCACTTCTATAATGTGGGTCAGTGGGCAAAGGAGGTTCAGAGAAATCCTGCCCGAGATGAAGAAGGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | GGTGAGGCCTTCTGCTTGAACTTTGAGTTGGAAACCGGGTGTGGGTaGTGTCACAAAATAGCAATACTTACTTTGTTTTGGCGCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GEAFCLNFELETGCG*CHKIAILTLFWRQP Trigger: GGGCTGGCGCCAAAACAAAGTAAGTATTGCTATTTTGTGACACCACCCACACCCGGTTTCCAACTCAAAGTTCAAGCAGAAGGCCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR TCA 90 bp | CGTATGTGGAAGGGAGACACCGCTCGCTCTGCTCCTACTCATAACTaGAGTCTGTCTCTATTGGCTCTGCTAGTTGTAGATCGACTATTG | + |
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Preference number: 1 (lower is better) Translates to: RMWKGDTARSAPTHN*SLSLLALLVVDRLL Trigger: CAATAGTCGATCTACAACTAGCAGAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTCCCTTCCACATACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | CAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATCTGTaGTGTGTGCTTGAGATAGCAGCAGCCAGGAGTCAGGAGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QDKHHIRKENALSNL*CVLEIAAARSQEAG Trigger: TCCAGCCTCCTGACTCCTGGCTGCTGCTATCTCAAGCACACACCACAGATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | ACAATAATCCACCTGCTCACTAACTATGCACTTGGATGGAGAAGATaGATGGACGGACGGATGGACAGCAGTCAACTACAGTCACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TIIHLLTNYALGWRR*MDGRMDSSQLQSPQ Trigger: CTGAGGTGACTGTAGTTGACTGCTGTCCATCCGTCCGTCCATCCATCTTCTCCATCCAAGTGCATAGTTAGTGAGCAGGTGGATTATTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR CCA 90 bp | AACACACTGACAATAATCCACCTGCTCACTAACTATGCACTTGGATaGAGAAGATGGATGGACGGACGGATGGACAGCAGTCAACTACAG | + |
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Preference number: 1 (lower is better) Translates to: NTLTIIHLLTNYALG*RRWMDGRMDSSQLQ Trigger: CTGTAGTTGACTGCTGTCCATCCGTCCGTCCATCCATCTTCTCCATCCAAGTGCATAGTTAGTGAGCAGGTGGATTATTGTCAGTGTGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR TCA 90 bp | AAAATAGCAATACTTACTTTGTTTTGGCGCCAGCCCAGAAGAATCTaGACACTTTCCCACACGCAGACCTTCACCTCTGACCTGAATCTT | + |
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Preference number: 1 (lower is better) Translates to: KIAILTLFWRQPRRI*TLSHTQTFTSDLNL Trigger: AAGATTCAGGTCAGAGGTGAAGGTCTGCGTGTGGGAAAGTGTTCAGATTCTTCTGGGCTGGCGCCAAAACAAAGTAAGTATTGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR TCA 90 bp | AGGGGTGAAGGTCTTTCTCTTACGGTAGGTAAGAATGAACTAGTTTaGGTTTATCTGCTTTTAACTCCAGCAGGTCTATCAGTGGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: RGEGLSLTVGKNELV*VYLLLTPAGLSVAS Trigger: GCTAGCCACTGATAGACCTGCTGGAGTTAAAAGCAGATAAACTCAAACTAGTTCATTCTTACCTACCGTAAGAGAAAGACCTTCACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR CCA 90 bp | GGACAGCAGTCAACTACAGTCACCTCAGCATGTGACTTGGTATGCTaGCTCCCACACATTGTTTTATTAAATGAGTTATATGTGTCACAT | + |
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Preference number: 1 (lower is better) Translates to: GQQSTTVTSACDLVC*LPHIVLLNELYVSH Trigger: ATGTGACACATATAACTCATTTAATAAAACAATGTGTGGGAGCCAGCATACCAAGTCACATGCTGAGGTGACTGTAGTTGACTGCTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR TCA 90 bp | AGCTCTTTGAAACTTAATAGACCCTTTTGGTATCTGCCAAGTATATaGAGCTCGAATTTCAGTTGTTTTACTAAAGCACAGCCATGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SSLKLNRPFWYLPSI*SSNFSCFTKAQPCL Trigger: CAAGCATGGCTGTGCTTTAGTAAAACAACTGAAATTCGAGCTTCATATACTTGGCAGATACCAAAAGGGTCTATTAAGTTTCAAAGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTCGGCCACATGCAAGGTaGCCCTCTTGTTCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: RAFQMRASSTGGRTSRPLRPHAR*PSCSGL Trigger: CAGTCCTGAACAAGAGGGTCACCTTGCATGTGGCCG...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGAGCCAGACTGCTCCAGCATGTCGATGCATCAGTGGGGGTAAGGCGCAGGAGTCAGGAGGCTaGAGGAGGAGGATTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TLWSQTAPACRCISGGKAQESGG*RRRIVR Trigger: CCTCACAATCCTCCTCCTCCAGCCTCCTGACTCCTG...CGCCTTACCCCCACTGATGCATCGACATGCTGGAGCAGTCTGGCTCCACAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTAGGTCAGGGCGACAATaGGAAGCAGACAAAATGGCG | + |
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Preference number: 2 (lower is better) Translates to: RAFQMRASSTGGRTSRPLRSGRQ*EADKMA Trigger: CGCCATTTTGTCTGCTTCTCATTGTCGCCCTGACCT...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGAGCCAGACTGCTCCAGCATGTCGATGCATCAGTGGGGGTAAGGCGCTTGGATGGAGAAGATaGATGGACGGACGGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: TLWSQTAPACRCISGGKALGWRR*MDGRMD Trigger: GTCCATCCGTCCGTCCATCCATCTTCTCCATCCAAG...CGCCTTACCCCCACTGATGCATCGACATGCTGGAGCAGTCTGGCTCCACAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTCTGCCATTGTCATCATaGACGCAGGCCATGACATCG | + |
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Preference number: 2 (lower is better) Translates to: RAFQMRASSTGGRTSRPLLPLSS*TQAMTS Trigger: CGATGTCATGGCCTGCGTCCATGATGACAATGGCAG...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCTGTGGCTGGCAGCGGTaGTTAAGGGGTTCCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: ETPLALLLLITEVCLYWLCGWQR*LRGSHQ Trigger: CTGATGGGAACCCCTTAACCACCGCTGCCAGCCACA...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATGCTGAGGAAGCCCAGTaGGCTTCGGGAGCACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: REDRRLVGSLACYCKDKDAEEAQ*ASGALE Trigger: CTCAAGTGCTCCCGAAGCCCACTGGGCTTCCTCAGC...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATCGGCCACATGCAAGGTaGCCCTCTTGTTCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: REDRRLVGSLACYCKDKDRPHAR*PSCSGL Trigger: CAGTCCTGAACAAGAGGGTCACCTTGCATGTGGCCG...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCCTTCTGCTTGAACTTTaGGTTGGAAACCGGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ETPLALLLLITEVCLYWLLLLEL*VGNRVW Trigger: CCACACCCGGTTTCCAACTCAAAGTTCAAGCAGAAG...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAGCTGAGGAAGCCCAGTaGGCTTCGGGAGCACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IGVSLRTNIILERKTHCPAEEAQ*ASGALE Trigger: CTCAAGTGCTCCCGAAGCCCACTGGGCTTCCTCAGC...TGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGAGCCAGACTGCTCCAGCATGTCGATGCATCAGTGGGGGTAAGGCGTGTCCTAAAATGAACTaGGGATGTAGCTCAGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: TLWSQTAPACRCISGGKACPKMN*GCSSVY Trigger: GTACACTGAGCTACATCCCCAGTTCATTTTAGGACA...CGCCTTACCCCCACTGATGCATCGACATGCTGGAGCAGTCTGGCTCCACAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR CAA 90 bp | CGAAAACTCCTTCTTCATCTCGGGCAGGATTTCTCTGAACCTCCTTaGCCCACTGACCCACATTATAGAAGTGCTGTATGCGGACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RKLLLHLGQDFSEPP*PTDPHYRSAVCGLC Trigger: GCAGAGTCCGCATACAGCACTTCTATAATGTGGGTCAGTGGGCAAAGGAGGTTCAGAGAAATCCTGCCCGAGATGAAGAAGGAGTTTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAATCAATATGATGGCCCTCACAGTTTTACCAAGCCAATGCATAGACATCGAGTGATGGCGCCCTaGATGGCCGGACCCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GLNQYDGPHSFTKPMHRHRVMAP*MAGPQA Trigger: TGCTTGGGGTCCGGCCATTCAGGGCGCCATCACTCG...ATGTCTATGCATTGGCTTGGTAAAACTGTGAGGGCCATCATATTGATTTAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATCAGGAGTCAGGAGGCTaGAGGAGGAGGATTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNQESGG*RRRIVR Trigger: CCTCACAATCCTCCTCCTCCAGCCTCCTGACTCCTG...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR CAA 90 bp | AACCGGGTGTGGGTGGTGTCACAAAATAGCAATACTTACTTTGTTTaGGCGCCAGCCCAGAAGAATCTGAACACTTTCCCACACGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: NRVWVVSQNSNTYFV*APAQKNLNTFPHAD Trigger: GTCTGCGTGTGGGAAAGTGTTCAGATTCTTCTGGGCTGGCGCCAAAACAAAGTAAGTATTGCTATTTTGTGACACCACCCACACCCGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCGAAACCGGGTGTGGGTaGTGTCACAAAATAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: ETPLALLLLITEVCLYWLETGCG*CHKIAI Trigger: TATTGCTATTTTGTGACACCACCCACACCCGGTTTC...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATCAGCCCAGAAGAATCTaGACACTTTCCCACACGCAG | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNQPRRI*TLSHTQ Trigger: CTGCGTGTGGGAAAGTGTTCAGATTCTTCTGGGCTG...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATGCTGTATGCGGACTCTaGCATTGTCATCATGGACGC | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNAVCGL*HCHHGR Trigger: GCGTCCATGATGACAATGGCAGAGTCCGCATACAGC...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTGGAGCCAGACTGCTCCAGCATGTCGATGCATCAGTGGGGGTAAGGCGCAAATATTTACAGCCTaGACCCTTAGAAGAAAATTG | + |
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Preference number: 2 (lower is better) Translates to: TLWSQTAPACRCISGGKAQIFTA*TLRRKL Trigger: CAATTTTCTTCTAAGGGTCCAGGCTGTAAATATTTG...CGCCTTACCCCCACTGATGCATCGACATGCTGGAGCAGTCTGGCTCCACAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATCGATCGTTTCATCCCTaGGAACATTCACGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNRSFHP*EHSRDA Trigger: AGCGTCCCGTGAATGTTCCCAGGGATGAAACGATCG...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTCTTGACAATCCTGCCTaGCCAGGAGAGAGGCTTGCG | + |
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Preference number: 2 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVLDNPA*PGERLA Trigger: CGCAAGCCTCTCTCCTGGTCAGGCAGGATTGTCAAG...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAGAAGTGTCGCACTATATGGAGTTCCATGTTGTAAGACAGACCACGTCGCTCCTACTCATAACTaGAGTCTGTCTCTATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GTRSVALYGVPCCKTDHVAPTHN*SLSLLA Trigger: AGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGC...GACGTGGTCTGTCTTACAACATGGAACTCCATATAGTGCGACACTTCTTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAATCAATATGATGGCCCTCACAGTTTTACCAAGCCAATGCATAGACATCATGGACGCAGGCCATaGCATCGTCACCACCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GLNQYDGPHSFTKPMHRHHGRRP*HRHHPS Trigger: AGATGGGTGGTGACGATGTCATGGCCTGCGTCCATG...ATGTCTATGCATTGGCTTGGTAAAACTGTGAGGGCCATCATATTGATTTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATCATCACTCAGATAGCAGTTAGGAGTGTTGCTACAATGACTTTACATAAACTTGACAATCCTGCCTaGCCAGGAGAGAGGCTTGCG | + |
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Preference number: 2 (lower is better) Translates to: RIITQIAVRSVATMTLHKLDNPA*PGERLA Trigger: CGCAAGCCTCTCTCCTGGTCAGGCAGGATTGTCAAG...TTTATGTAAAGTCATTGTAGCAACACTCCTAACTGCTATCTGAGTGATGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATTGCTGGAGCCAAGCCTaGATAAGATCAGAGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNCWSQA*IRSEGL Trigger: TAAACCCTCTGATCTTATTCAGGCTTGGCTCCAGCA...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATAAGAAGTTCTCTGCTTaGTGTGAAGTACCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RRLPQDKHHIRKENALSNKKFSA*CEVPGG Trigger: GCCTCCTGGTACTTCACATCAAGCAGAGAACTTCTT...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAGAGAAGCAGACAAAATaGCGAGGAGAAGGTCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: IGVSLRTNIILERKTHCPEKQTK*RGEGLV Trigger: TACCAGACCTTCTCCTCGCCATTTTGTCTGCTTCTC...TGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGTCTGTGGTGTGTGCTTaGGATAGCAGCAGCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ITRRGHKNITRRVDYIKESVVCA*DSSSQE Trigger: CTCCTGGCTGCTGCTATCTCAAGCACACACCACAGA...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGCTCTTCCAGAGGTCCTaGGTTCAAATCCCAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: HTCARMPLCYSVISANQLLFQRS*VQIPAS Trigger: GCTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAG...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCATTGGAAGACATGATGTaGTCACAAGGAGAGGACATA | + |
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Preference number: 2 (lower is better) Translates to: IGVSLRTNIILERKTHCPLEDMM*SQGEDI Trigger: TATGTCCTCTCCTTGTGATCACATCATGTCTTCCAA...TGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGCTAGCATAGGTATTTGGACTAAAAGAGTATCTGGCTCTTTTGACAAAACCCATCTTTTTGTCTaGAGAGAATCCAACCGCGAC | + |
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Preference number: 2 (lower is better) Translates to: QAASIGIWTKRVSGSFDKTHLFV*RESNRD Trigger: GTCGCGGTTGGATTCTCTTCAGACAAAAAGATGGGT...TTTGTCAAAAGAGCCAGATACTCTTTTAGTCCAAATACCTATGCTAGCAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTCGTACTTGTAAATACTaGCAACGCGCTCTGAAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVRTCKY*QRALKP Trigger: CGGCTTCAGAGCGCGTTGTCAGTATTTACAAGTACG...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGAGGCAGCCGACGGCATaGAAATGTCTTCGTACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ITRRGHKNITRRVDYIKERQPTA*KCLRTC Trigger: ACAAGTACGAAGACATTTTCATGCCGTCGGCTGCCT...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGATCATCACTCAGATAGCAGTTAGGAGTGTTGCTACAATGACTTTACATAAAAGACACGTTAATGGCTaGCAGACCTCAGGCAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RIITQIAVRSVATMTLHKRHVNG*QTSGKT Trigger: TGTTTTGCCTGAGGTCTGGCAGCCATTAACGTGTCT...TTTATGTAAAGTCATTGTAGCAACACTCCTAACTGCTATCTGAGTGATGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCCCAACCATCTGTGTCTaGACTCAGCTCAAACTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSPTICV*TQLKLH Trigger: GTGGAGTTTGAGCTGAGTGCAGACACAGATGGTTGG...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTGCTAGCATAGGTATTTGGACTAAAAGAGTATCTGGCTCTTTTGACAAATATAGAAGTGCTGTATaGGGACTCTGCCATTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QAASIGIWTKRVSGSFDKYRSAV*GLCHCH Trigger: ATGACAATGGCAGAGTCCGCATACAGCACTTCTATA...TTTGTCAAAAGAGCCAGATACTCTTTTAGTCCAAATACCTATGCTAGCAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGATCATCACTCAGATAGCAGTTAGGAGTGTTGCTACAATGACTTTACATAAATGTATTGGTACTTTGTaGAGCCAGACTGCTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RIITQIAVRSVATMTLHKCIGTL*SQTAPA Trigger: TGCTGGAGCAGTCTGGCTCCACAAAGTACCAATACA...TTTATGTAAAGTCATTGTAGCAACACTCCTAACTGCTATCTGAGTGATGATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CAA 90 bp | CGAATTTCAGTTGTTTTACTAAAGCACAGCCATGCTTGTTTGTTTTaGAGCAGGGTAGCACAGCTGCAACACAAGTTCAAAGTTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: RISVVLLKHSHACLF*SRVAQLQHKFKVQI Trigger: TATTTGAACTTTGAACTTGTGTTGCAGCTGTGCTACCCTGCTCAAAAACAAACAAGCATGGCTGTGCTTTAGTAAAACAACTGAAATTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR TCA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGAGACCCAGTGAAACTTaGTTTGAAACGTATGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HTCARMPLCYSVISANQLRPSET*FETYVE Trigger: TTCCACATACGTTTCAAATCAAGTTTCACTGGGTCT...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR TCA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGTGTTTTTGGAAGACATaGTGTGATCACAAGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ITRRGHKNITRRVDYIKECFWKT*CDHKER Trigger: CCTCTCCTTGTGATCACATCATGTCTTCCAAAAACA...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGAGACCCAGTGAAACTTaGTTTGAAACGTATGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITRRGHKNITRRVDYIKERPSET*FETYVE Trigger: TTCCACATACGTTTCAAATCAAGTTTCACTGGGTCT...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR GCA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGACTGAAAGTAAAGACTaGTCAAAGCAAAGACTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HTCARMPLCYSVISANQLTESKD*SKQRLF Trigger: GAACAGTCTTTGCTTTGAGCAGTCTTTACTTTCAGT...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTACTGAAAGTAAAGACTaGTCAAAGCAAAGACTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVTESKD*SKQRLF Trigger: GAACAGTCTTTGCTTTGAGCAGTCTTTACTTTCAGT...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CCA 72 bp | GTAGAAGGTCAGGGCGACAATGAGAAGCAGACAAAATaGCGAGGAGAAGGTCTGGTAGGCAGCCGACGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VEGQGDNEKQTK*RGEGLVGSRRH Trigger: ATGCCGTCGGCTGCCTACCAGACCTTCTCCTCGCCATTTTGTCTGCTTCTCATTGTCGCCCTGACCTTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGTGGAGCCAGACTGCTCCAGCATGTCGATGCATCAGTGGGGGTAAGGCGGGCAAAACAAAGCTGTaGCTTACCGAGACTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLWSQTAPACRCISGGKAGKTKL*LTETGS Trigger: GGAACCAGTCTCGGTAAGCAACAGCTTTGTTTTGCC...CGCCTTACCCCCACTGATGCATCGACATGCTGGAGCAGTCTGGCTCCACAAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCATGCGGACTCTGCCATaGTCATCATGGACGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ETPLALLLLITEVCLYWLMRTLP*SSWTQA Trigger: GGCCTGCGTCCATGATGACAATGGCAGAGTCCGCAT...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | GCAGGCCATGACATCGTCACCACCCATCTTTTTGTCTaGAGAGAATCCAACCGCGACCCAACCATCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AGHDIVTTHLFV*RESNRDPTICV Trigger: GACACAGATGGTTGGGTCGCGGTTGGATTCTCTTCAGACAAAAAGATGGGTGGTGACGATGTCATGGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR CCA 72 bp | AGCGGTGTAAGCGCCCACAGCTACACTCTCGCCTCTTaGCAGGCTGCTAGCATAGGTATTTGGACTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGVSAHSYTLAS*QAASIGIWTKR Trigger: TCTTTTAGTCCAAATACCTATGCTAGCAGCCTGCCAAGAGGCGAGAGTGTAGCTGTGGGCGCTTACACCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CCA 72 bp | GATACTGAAGGGTTTTCACTCCATCTAGTCTGTGGCTaGCAGCGGTGGTTAAGGGGTTCCCATCAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DTEGFSLHLVCG*QRWLRGSHQQV Trigger: TACCTGCTGATGGGAACCCCTTAACCACCGCTGCCAGCCACAGACTAGATGGAGTGAAAACCCTTCAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCGAAAGTAGCGTTGCCTaGACAATCCTGCCTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ETPLALLLLITEVCLYWLESSVA*TILPDQ Trigger: CTGGTCAGGCAGGATTGTCAAGGCAACGCTACTTTC...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCTGCTTGAACTTTGAGTaGGAAACCGGGTGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ETPLALLLLITEVCLYWLCLNFE*ETGCGW Trigger: CCACCCACACCCGGTTTCCAACTCAAAGTTCAAGCA...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTTCACCACCCATCTTTTaGTCTGAAGAGAATCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: RAFQMRASSTGGRTSRPLSPPIF*SEENPT Trigger: GGTTGGATTCTCTTCAGACAAAAAGATGGGTGGTGA...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | CCTGAGGACGAGATAATTAAGTTAGAGCCTTTCAGATaGGAGCATCGTCCACAGGAGGGAGGACCTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PEDEIIKLEPFR*EHRPQEGGPQG Trigger: GCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCTAACTTAATTATCTCGTCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | GCTCAGTGTACAATGCCTTGGGTATGTCCCCAGCACTaGAAAGAAAGCGGGGAGGAGAGAGAAAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AQCTMPWVCPQH*KESGEERERER Trigger: TCTCTCTCTTTCTCTCTCCTCCCCGCTTTCTTTTCAGTGCTGGGGACATACCCAAGGCATTGTACACTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR TCA 72 bp | TGCGGACTCTGCCATTGTCATCATGGACGCAGGCCATaGCATCGTCACCACCCATCTTTTTGTCTGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGLCHCHHGRRP*HRHHPSFCLKR Trigger: TCTCTTCAGACAAAAAGATGGGTGGTGACGATGTCATGGCCTGCGTCCATGATGACAATGGCAGAGTCCGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR CCA 72 bp | CACCTGCTCACTAACTATGCACTTGGATGGAGAAGATaGATGGACGGACGGATGGACAGCAGTCAACTACAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLTNYALGWRR*MDGRMDSSQLQ Trigger: CTGTAGTTGACTGCTGTCCATCCGTCCGTCCATCCATCTTCTCCATCCAAGTGCATAGTTAGTGAGCAGGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTAGCAAAAGGCACCCTTaGTCTGGGTTTAAATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RAFQMRASSTGGRTSRPLSKRHP*SGFKSI Trigger: TATTGATTTAAACCCAGACAAAGGGTGCCTTTTGCT...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | GACAAAAATCCCGAATGTAGGCAGTGCGAGAAAGTGTaGTTCTGCTGGGATGGAAACCCATCCTCAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: DKNPECRQCEKV*FCWDGNPSSGV Trigger: GACACCTGAGGATGGGTTTCCATCCCAGCAGAATCACACTTTCTCGCACTGCCTACATTCGGGATTTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CCA 72 bp | GACCTCAGGCAAAACAAAGCTGTTGCTTACCGAGACTaGTTCCTCACTGTTACCTCTTTTGTGCCGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLRQNKAVAYRD*FLTVTSFVPTP Trigger: TGGAGTCGGCACAAAAGAGGTAACAGTGAGGAACCAGTCTCGGTAAGCAACAGCTTTGTTTTGCCTGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATGAAAGTAGCGTTGCCTaGACAATCCTGCCTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: REDRRLVGSLACYCKDKDESSVA*TILPDQ Trigger: CTGGTCAGGCAGGATTGTCAAGGCAACGCTACTTTC...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | ATACTTACTTTGTTTTGGCGCCAGCCCAGAAGAATCTaGACACTTTCCCACACGCAGACCTTCACCTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ILTLFWRQPRRI*TLSHTQTFTSD Trigger: GTCAGAGGTGAAGGTCTGCGTGTGGGAAAGTGTTCAGATTCTTCTGGGCTGGCGCCAAAACAAAGTAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | AAGGGAGACACCGCTCGCTCTGCTCCTACTCATAACTaGAGTCTGTCTCTATTGGCTCTGCTAGTTGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KGDTARSAPTHN*SLSLLALLVVD Trigger: ATCTACAACTAGCAGAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATCTGCAGGTGACGCGGTaGTTCTCGAAAACTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RRLPQDKHHIRKENALSNLQVTR*FSKTPS Trigger: AGAAGGAGTTTTCGAGAACAACCGCGTCACCTGCAG...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | AGCACATGGTGGATTGTAACTATCTACAGTATGATCTaGAGCCCTCTTCTGGCACGCAGGTGTACATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: STWWIVTIYSMI*SPLLARRCTCR Trigger: TCTGCATGTACACCTGCGTGCCAGAAGAGGGCTTCAGATCATACTGTAGATAGTTACAATCCACCATGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR TCA 72 bp | AATGTCTTCGTACTTGTAAATACTGACAACGCGCTCTaGAGCCGGTGGAGAGTCTATGTCGTGACGAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: NVFVLVNTDNAL*SRWRVYVVTSD Trigger: ATCACTCGTCACGACATAGACTCTCCACCGGCTTCAGAGCGCGTTGTCAGTATTTACAAGTACGAAGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR GCA 72 bp | TTAATGGCTGCCAGACCTCAGGCAAAACAAAGCTGTTaGTTACCGAGACTGGTTCCTCACTGTTACCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LMAARPQAKQSC*LPRLVPHCYLF Trigger: AAAGAGGTAACAGTGAGGAACCAGTCTCGGTAAGCAACAGCTTTGTTTTGCCTGAGGTCTGGCAGCCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR GCA 72 bp | CTGGTCATTGGTATATTCTTCAACAGAACACGCCCCTaGCCCAGGCTAGATTTACATATGGTTTTCCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVIGIFFNRTRP*PRLDLHMVFHG Trigger: GCCATGGAAAACCATATGTAAATCTAGCCTGGGGCAGGGGCGTGTTCTGTTGAAGAATATACCAATGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CCA 72 bp | CATCATATTAGAAAGGAAAACGCACTGTCCAATCTGTaGTGTGTGCTTGAGATAGCAGCAGCCAGGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HHIRKENALSNL*CVLEIAAARSQ Trigger: CTGACTCCTGGCTGCTGCTATCTCAAGCACACACCACAGATTGGACAGTGCGTTTTCCTTTCTAATATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATTTCTCTGAACCTCCTTaGCCCACTGACCCACATTAT | + |
|
Preference number: 3 (lower is better) Translates to: RRLPQDKHHIRKENALSNFSEPP*PTDPHY Trigger: ATAATGTGGGTCAGTGGGCAAAGGAGGTTCAGAGAA...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | TCTTTCCTCAAATACAGCTGTAAGAAGTTCTCTGCTTaGTGTGAAGTACCAGGAGGCAGGCAAAGGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SFLKYSCKKFSA*CEVPGGRQRQP Trigger: TGGTTGCCTTTGCCTGCCTCCTGGTACTTCACATCAAGCAGAGAACTTCTTACAGCTGTATTTGAGGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR GCA 72 bp | CAGCCTGGACCCTTAGAAGAAAATTGTAAGAACTCCTaGGCTAGAACAAAGAATGGCATTCAACCTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QPGPLEENCKNS*ARTKNGIQPQC Trigger: GCACTGAGGTTGAATGCCATTCTTTGTTCTAGCGCAGGAGTTCTTACAATTTTCTTCTAAGGGTCCAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR TCA 72 bp | AAACTAGTCACCAAAGTCAAAAGACCCAGTGAAACTTaGTTTGAAACGTATGTGGAAGGGAGACACCGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KLVTKVKRPSET*FETYVEGRHRS Trigger: CGAGCGGTGTCTCCCTTCCACATACGTTTCAAATCAAGTTTCACTGGGTCTTTTGACTTTGGTGACTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | GACAGAAACCAACCCAAGGTAACTGAATGTAGCTTCTaGATGTTCTCCAAATGCGTGTTTGACTATCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DRNQPKVTECSF*MFSKCVFDYRG Trigger: CCCACGATAGTCAAACACGCATTTGGAGAACATTCAGAAGCTACATTCAGTTACCTTGGGTTGGTTTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATAGCAAAAGGCACCCTTaGTCTGGGTTTAAATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: REDRRLVGSLACYCKDKDSKRHP*SGFKSI Trigger: TATTGATTTAAACCCAGACAAAGGGTGCCTTTTGCT...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGGGTGAGGCCTTCTGCTaGAACTTTGAGTTGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: HTCARMPLCYSVISANQLGEAFC*NFELET Trigger: GGTTTCCAACTCAAAGTTCAAGCAGAAGGCCTCACC...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR TCA 72 bp | TCCCTAGAATCTCTCCCATATTCCCTATCAACCGTGTaGCTATCTAAAAGCATTTATGCGCCACAGAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLESLPYSLSTV*LSKSIYAPQKS Trigger: ACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAATATGGGAGAGATTCTAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR TCA 72 bp | TCTAACTTGAAAAACACCATTGGCTACAGTCACCCATaGACACCTTACTTGGTAGAATACAGTGGCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNLKNTIGYSHP*TPYLVEYSGRR Trigger: TCTTCTGCCACTGTATTCTACCAAGTAAGGTGTTCATGGGTGACTGTAGCCAATGGTGTTTTTCAAGTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR GCA 72 bp | CAGTCAACTACAGTCACCTCAGCATGTGACTTGGTATaGTGGCTCCCACACATTGTTTTATTAAATGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QSTTVTSACDLV*WLPHIVLLNEL Trigger: TAACTCATTTAATAAAACAATGTGTGGGAGCCAGCATACCAAGTCACATGCTGAGGTGACTGTAGTTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CCA 72 bp | TTCTGCTTGAACTTTGAGTTGGAAACCGGGTGTGGGTaGTGTCACAAAATAGCAATACTTACTTTGTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FCLNFELETGCG*CHKIAILTLFW Trigger: CCAAAACAAAGTAAGTATTGCTATTTTGTGACACCACCCACACCCGGTTTCCAACTCAAAGTTCAAGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCGGTGAGGCCTTCTGCTaGAACTTTGAGTTGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSGEAFC*NFELET Trigger: GGTTTCCAACTCAAAGTTCAAGCAGAAGGCCTCACC...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGTGCAAGGTGACCCTCTaGTTCAGGACTGAAAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ITRRGHKNITRRVDYIKECKVTL*FRTESK Trigger: TTTACTTTCAGTCCTGAACAAGAGGGTCACCTTGCA...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR GCA 72 bp | CTCCAGGAGACACATTATAGCATACATGTGCAAGGATaGCACTATGTTATTCAGTTATATCAGCAAACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LQETHYSIHVQG*HYVIQLYQQTN Trigger: GTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATGCTATAATGTGTCTCCTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCATCACTCAGATAGCAGTTAGGAGTGTTGCTACAATGACTTTACATAAAAATACTTACTTTGTTTaGGCGCCAGCCCAGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RIITQIAVRSVATMTLHKNTYFV*APAQKN Trigger: ATTCTTCTGGGCTGGCGCCAAAACAAAGTAAGTATT...TTTATGTAAAGTCATTGTAGCAACACTCCTAACTGCTATCTGAGTGATGATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCATAGCAATACTTACTTaGTTTTGGCGCCAGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSIAILT*FWRQPR Trigger: TCTGGGCTGGCGCCAAAACAAAGTAAGTATTGCTAT...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCATCACTCAGATAGCAGTTAGGAGTGTTGCTACAATGACTTTACATAAAACAAGGAAATCCAACTaGAAACTACACAGGTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RIITQIAVRSVATMTLHKTRKSN*KLHRLL Trigger: GAGCAACCTGTGTAGTTTCAAGTTGGATTTCCTTGT...TTTATGTAAAGTCATTGTAGCAACACTCCTAACTGCTATCTGAGTGATGATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR TCA 72 bp | GGTCTTTCTCTTACGGTAGGTAAGAATGAACTAGTTTaGGTTTATCTGCTTTTAACTCCAGCAGGTCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSLTVGKNELV*VYLLLTPAGLS Trigger: TGATAGACCTGCTGGAGTTAAAAGCAGATAAACTCAAACTAGTTCATTCTTACCTACCGTAAGAGAAAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CCA 72 bp | ATTAGTTTGAAAATCATTAGCTGTCCTAAAATGAACTaGGGATGTAGCTCAGTGTACAATGCCTTGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: ISLKIISCPKMN*GCSSVYNALGM Trigger: CATACCCAAGGCATTGTACACTGAGCTACATCCCCAGTTCATTTTAGGACAGCTAATGATTTTCAAACTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CCA 72 bp | TCAACTACAGTCACCTCAGCATGTGACTTGGTATGCTaGCTCCCACACATTGTTTTATTAAATGAGTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: STTVTSACDLVC*LPHIVLLNELY Trigger: ATATAACTCATTTAATAAAACAATGTGTGGGAGCCAGCATACCAAGTCACATGCTGAGGTGACTGTAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCGAGTATCTGGCTCTTTaGACAAAAGGAAACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSEYLAL*TKGNKE Trigger: TTCTTTGTTTCCTTTTGTCAAAAGAGCCAGATACTC...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCTTTCAGATGAGAGCATCGTCCACAGGAGGGAGGACCTCAAGGCCCCTTGGTCGTAGAACTCGCTaGCGAAGGTGCCGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAFQMRASSTGGRTSRPLGRRTR*RRCRRR Trigger: CCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACC...AAGGGGCCTTGAGGTCCTCCCTCCTGTGGACGATGCTCTCATCTGAAAGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CAA 72 bp | CGTCCACAGGAGGGAGGACCTCAAGGCCCCTTCGACTaGCTGGCACAAGTAGTGGTCCTGAAGCAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQEGGPQGPFD*LAQVVVLKQRR Trigger: TCTTCTCTGCTTCAGGACCACTACTTGTGCCAGCAAGTCGAAGGGGCCTTGAGGTCCTCCCTCCTGTGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR GCA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCACTCGCTGGCGAAGGTaGCGTAGGAGGAGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETPLALLLLITEVCLYWLTRWRR*RRRSRG Trigger: GCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGT...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR GCA 90 bp | TACCAACTCAGGTGCAGATCCACGATCGTTTCATCCCTGGGAACATTCACGGGAACTCGCTGGCGAAGGTaGCGTAGGAGGAGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YQLRCRSTIVSSLGTFTGTRWRR*RRRSRG Trigger: GCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGT...TCCCGTGAATGTTCCCAGGGATGAAACGATCGTGGATCTGCACCTGAGTTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATCGAGTGATGGCGCCCTaGATGGCCGGACCCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: REDRRLVGSLACYCKDKDRVMAP*MAGPQA Trigger: TGCTTGGGGTCCGGCCATTCAGGGCGCCATCACTCG...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CCA 90 bp | AGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAATTGTCGTCCGCGGGGCTaGCATCGCAGGCAGCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLPQDKHHIRKENALSNCRPRG*HRRQRS Trigger: GGATCGCTGCCTGCGATGCCAGCCCCGCGGACGACA...ATTGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CAA 72 bp | ACATTCACGGGACGCTTAAACCTGCAGGTGACGCGGTaGTTCTCGAAAACTCCTTCTTCATCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFTGRLNLQVTR*FSKTPSSSRAG Trigger: TCCTGCCCGAGATGAAGAAGGAGTTTTCGAGAACAACCGCGTCACCTGCAGGTTTAAGCGTCCCGTGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAAGAAGTGTCGCACTATATGGAGTTCCATGTTGTAAGACAGACCACGTCCATGGACGCAGGCCATaGCATCGTCACCACCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GTRSVALYGVPCCKTDHVHGRRP*HRHHPS Trigger: AGATGGGTGGTGACGATGTCATGGCCTGCGTCCATG...GACGTGGTCTGTCTTACAACATGGAACTCCATATAGTGCGACACTTCTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR GCA 90 bp | GGGACAAGAAGTGTCGCACTATATGGAGTTCCATGTTGTAAGACAGACCACGTCGCTGTATGCGGACTCTaGCATTGTCATCATGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRSVALYGVPCCKTDHVAVCGL*HCHHGR Trigger: GCGTCCATGATGACAATGGCAGAGTCCGCATACAGC...GACGTGGTCTGTCTTACAACATGGAACTCCATATAGTGCGACACTTCTTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CCA 90 bp | GGGACAAGAAGTGTCGCACTATATGGAGTTCCATGTTGTAAGACAGACCACGTCCTGCCATTGTCATCATaGACGCAGGCCATGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: GTRSVALYGVPCCKTDHVLPLSS*TQAMTS Trigger: CGATGTCATGGCCTGCGTCCATGATGACAATGGCAG...GACGTGGTCTGTCTTACAACATGGAACTCCATATAGTGCGACACTTCTTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CCA 90 bp | GAGACACCGCTCGCTCTGCTCCTACTCATAACTGAAGTCTGTCTCTATTGGCTCGAGAAGCAGACAAAATaGCGAGGAGAAGGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETPLALLLLITEVCLYWLEKQTK*RGEGLV Trigger: TACCAGACCTTCTCCTCGCCATTTTGTCTGCTTCTC...GAGCCAATAGAGACAGACTTCAGTTATGAGTAGGAGCAGAGCGAGCGGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATCGATCGTTTCATCCCTaGGAACATTCACGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: REDRRLVGSLACYCKDKDRSFHP*EHSRDA Trigger: AGCGTCCCGTGAATGTTCCCAGGGATGAAACGATCG...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CAA 72 bp | GTTAATGGCTGCCAGACCTCAGGCAAAACAAAGCTGTaGCTTACCGAGACTGGTTCCTCACTGTTACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNGCQTSGKTKL*LTETGSSLLPL Trigger: AAGAGGTAACAGTGAGGAACCAGTCTCGGTAAGCAACAGCTTTGTTTTGCCTGAGGTCTGGCAGCCATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGACCGACGCTTAGTAGGGTCACTTGCATGTTACTGTAAGGACAAGGATCCAACCATCTGTGTCTaGACTCAGCTCAAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: REDRRLVGSLACYCKDKDPTICV*TQLKLH Trigger: GTGGAGTTTGAGCTGAGTGCAGACACAGATGGTTGG...ATCCTTGTCCTTACAGTAACATGCAAGTGACCCTACTAAGCGTCGGTCTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR TCA 90 bp | ATAGGCGTCTCCCTCAGGACAAACATCATATTAGAAAGGAAAACGCACTGTCCAAGGCAGCCGACGGCATaGAAATGTCTTCGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGVSLRTNIILERKTHCPRQPTA*KCLRTC Trigger: ACAAGTACGAAGACATTTTCATGCCGTCGGCTGCCT...TGGACAGTGCGTTTTCCTTTCTAATATGATGTTTGTCCTGAGGGAGACGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR TCA 90 bp | GGTTTAAATCAATATGATGGCCCTCACAGTTTTACCAAGCCAATGCATAGACATTCCCGTATCCTCCTCTaGCAGGTAGCGCAGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLNQYDGPHSFTKPMHRHSRILL*QVAQVV Trigger: TACGACCTGCGCTACCTGTCAGAGGAGGATACGGGA...ATGTCTATGCATTGGCTTGGTAAAACTGTGAGGGCCATCATATTGATTTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| CDS-3UTR GCA 90 bp | GGGACAAGAAGTGTCGCACTATATGGAGTTCCATGTTGTAAGACAGACCACGTCTATAGAAGTGCTGTATaGGGACTCTGCCATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRSVALYGVPCCKTDHVYRSAV*GLCHCH Trigger: ATGACAATGGCAGAGTCCGCATACAGCACTTCTATA...GACGTGGTCTGTCTTACAACATGGAACTCCATATAGTGCGACACTTCTTGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CCA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCGGTCGTAGAACTCGCTaGCGAAGGTGCCGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSGRRTR*RRCRRR Trigger: CCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACC...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CAA 72 bp | ATAAAGATCTCCACGGCCACATGCAAGGTGACCCTCTaGTTCAGGACTGAAAGTAAAGACTGCTCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKISTATCKVTL*FRTESKDCSKQ Trigger: TTGCTTTGAGCAGTCTTTACTTTCAGTCCTGAACAAGAGGGTCACCTTGCATGTGGCCGTGGAGATCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR CCA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCCCACAGGAGGAGCAGTaGGGAAAGGGTAACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSPQEEQ*GKGNPP Trigger: AGGAGGGTTACCCTTTCCCCACTGCTCCTCCTGTGG...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CAA 72 bp | TGGGTGGTGTCACAAAATAGCAATACTTACTTTGTTTaGGCGCCAGCCCAGAAGAATCTGAACACTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVVSQNSNTYFV*APAQKNLNTFP Trigger: TGGGAAAGTGTTCAGATTCTTCTGGGCTGGCGCCAAAACAAAGTAAGTATTGCTATTTTGTGACACCACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTGTAGTCACAGGTTTCTaGATTACAGCCTGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVVVTGF*ITAWLP Trigger: GGGAAGCCAGGCTGTAATGCAGAAACCTGTGACTAC...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR CCA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTCTTGATTTTGGCGAATaGGTCCACAGGAGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVLDFGE*VHRRSS Trigger: ACTGCTCCTCCTGTGGACCCATTCGCCAAAATCAAG...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR TCA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCAGGTCAGGGCGACAATaGGAAGCAGACAAAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSRSGRQ*EADKMA Trigger: CGCCATTTTGTCTGCTTCTCATTGTCGCCCTGACCT...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR GCA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGGTAGTCACAGGTTTCTaGATTACAGCCTGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITRRGHKNITRRVDYIKEVVTGF*ITAWLP Trigger: GGGAAGCCAGGCTGTAATGCAGAAACCTGTGACTAC...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| CDS-3UTR CCA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGTTCTGCATTACAGCCTaGCTTCCCGTATCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTCARMPLCYSVISANQLFCITA*LPVSEA Trigger: TGCTTCAGATACGGGAAGCCAGGCTGTAATGCAGAA...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| 3UTR CAA 72 bp | GAAAGTCATGTTGCCTCCCTTAGCCTAGGCTGTCTCTaGCAAGATAAGTGCATTAAACTAGTGTACGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESHVASLSLGCL*QDKCIKLVYVF Trigger: AAAAACGTACACTAGTTTAATGCACTTATCTTGCAAGAGACAGCCTAGGCTAAGGGAGGCAACATGACTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
||
| 3UTR CAA 72 bp | TCGAATTTCAGTTGTTTTACTAAAGCACAGCCATGCTaGTTTGTTTTTGAGCAGGGTAGCACAGCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNFSCFTKAQPC*FVFEQGSTAAT Trigger: TGTTGCAGCTGTGCTACCCTGCTCAAAAACAAACAAGCATGGCTGTGCTTTAGTAAAACAACTGAAATTCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR TCA 90 bp | GGTTATAAAAATATCAGGCTTCTTATTTACAACAAGGGTGTCTCTATCTACTCCACCCATCTTTTTGTCTaGAGAGAATCCAACCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GYKNIRLLIYNKGVSIYSTHLFV*RESNRD Trigger: GTCGCGGTTGGATTCTCTTCAGACAAAAAGATGGGT...GGAGTAGATAGAGACACCCTTGTTGTAAATAAGAAGCCTGATATTTTTATAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS CCA 90 bp | AAGGGTAACCCTCCTCTGACAGGTAGCGCAGGTCGTAGAACTCGCTaGCGAAGGTGCCGTAGGAGGAGTCGTGGCGCGGCACTGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KGNPPLTGSAGRRTR*RRCRRRSRGAALPR Trigger: ACGAGGCAGTGCCGCGCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACCTGCGCTACCTGTCAGAGGAGGGTTACCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS CCA 90 bp | TTCCCGTATCCTCCTCTGACAGGTAGCGCAGGTCGTAGAACTCGCTaGCGAAGGTGCCGTAGGAGGAGTCGTGGCGCGGCACTGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FPYPPLTGSAGRRTR*RRCRRRSRGAALPR Trigger: ACGAGGCAGTGCCGCGCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACCTGCGCTACCTGTCAGAGGAGGATACGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128276.2 |
||
| CDS GCA 90 bp | GTCAGCGCCTATCATCCGGTAGCTAAGGAAGTAGTCACAGGTTTCTaGATTACAGCCTGGCTTCCCGTATCTGAAGCATCCCTTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSAYHPVAKEVVTGF*ITAWLPVSEASLSS Trigger: AGAACTAAGGGATGCTTCAGATACGGGAAGCCAGGCTGTAATGCAGAAACCTGTGACTACTTCCTTAGCTACCGGATGATAGGCGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CAA 90 bp | ATTCCCTATCAACCGTGTGACTATCTAAAAGCATTTATGCGCCACAGAAAAGTTCTGCAGGTGACGCGGTaGTTCTCGAAAACTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPYQPCDYLKAFMRHRKVLQVTR*FSKTPS Trigger: AGAAGGAGTTTTCGAGAACAACCGCGTCACCTGCAG...AACTTTTCTGTGGCGCATAAATGCTTTTAGATAGTCACACGGTTGATAGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CAA 90 bp | CATACATGTGCAAGGATGCCACTATGTTATTCAGTTATATCAGCAAACCAACTGTTCTCTGAACCTCCTTaGCCCACTGACCCACATTAT | + |
|
Preference number: 5 (lower is better) Translates to: HTCARMPLCYSVISANQLFSEPP*PTDPHY Trigger: ATAATGTGGGTCAGTGGGCAAAGGAGGTTCAGAGAA...CAGTTGGTTTGCTGATATAACTGAATAACATAGTGGCATCCTTGCACATGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS-3UTR CAA 90 bp | ATCACAAGGAGAGGACATAAAAACATTACTCGTCGGGTAGACTATATAAAAGAGTCACCACCCATCTTTTaGTCTGAAGAGAATCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: ITRRGHKNITRRVDYIKESPPIF*SEENPT Trigger: GGTTGGATTCTCTTCAGACAAAAAGATGGGTGGTGA...CTCTTTTATATAGTCTACCCGACGAGTAATGTTTTTATGTCCTCTCCTTGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
||
| CDS GCA 72 bp | GGCGAAGGTGCCGTAGGAGGAGTCGTGGCGCGGCACTaGCTCGTCCGCGCCCGCGTCCCCTCGCGCGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GEGAVGGVVARH*LVRARVPSRAS Trigger: GGACGCGCGCGAGGGGACGCGGGCGCGGACGAGGCAGTGCCGCGCCACGACTCCTCCTACGGCACCTTCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| CDS GCA 72 bp | ACAGGTAGCGCAGGTCGTAGAACTCGCTGGCGAAGGTaGCGTAGGAGGAGTCGTGGCGCGGCACTGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: TGSAGRRTRWRR*RRRSRGAALPR Trigger: ACGAGGCAGTGCCGCGCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACCTGCGCTACCTGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| CDS CCA 72 bp | CCTCCTCTGACAGGTAGCGCAGGTCGTAGAACTCGCTaGCGAAGGTGCCGTAGGAGGAGTCGTGGCGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: PPLTGSAGRRTR*RRCRRRSRGAA Trigger: TGCCGCGCCACGACTCCTCCTACGGCACCTTCGCCAGCGAGTTCTACGACCTGCGCTACCTGTCAGAGGAGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053681.6 ENSMUST00000128276.2 |
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| CDS CCA 72 bp | AGTTCTTCCACAGTCTTCCACCTTGATTTTGGCGAATaGGTCCACAGGAGGAGCAGTGGGGAAAGGGTAACC | + |
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Preference number: 6 (lower is better) Translates to: SSSTVFHLDFGE*VHRRSSGERVT Trigger: GGTTACCCTTTCCCCACTGCTCCTCCTGTGGACCCATTCGCCAAAATCAAGGTGGAAGACTGTGGAAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| CDS CAA 90 bp | TTCCCGTATCTGAAGCATCCCTTAGTTCTTCCACAGTCTTCCACCTaGATTTTGGCGAATGGGTCCACAGGAGGAGCAGTGGGGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: FPYLKHPLVLPQSST*ILANGSTGGAVGKG Trigger: CCCTTTCCCCACTGCTCCTCCTGTGGACCCATTCGCCAAAATCAAGGTGGAAGACTGTGGAAGAACTAAGGGATGCTTCAGATACGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| CDS CAA 72 bp | CATCCCTTAGTTCTTCCACAGTCTTCCACCTTGATTTaGGCGAATGGGTCCACAGGAGGAGCAGTGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: HPLVLPQSSTLI*ANGSTGGAVGK Trigger: TTTCCCCACTGCTCCTCCTGTGGACCCATTCGCCAAAATCAAGGTGGAAGACTGTGGAAGAACTAAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| CDS CAA 72 bp | CTGAAGCATCCCTTAGTTCTTCCACAGTCTTCCACCTaGATTTTGGCGAATGGGTCCACAGGAGGAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LKHPLVLPQSST*ILANGSTGGAV Trigger: CACTGCTCCTCCTGTGGACCCATTCGCCAAAATCAAGGTGGAAGACTGTGGAAGAACTAAGGGATGCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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| CDS GCA 72 bp | TATCATCCGGTAGCTAAGGAAGTAGTCACAGGTTTCTaGATTACAGCCTGGCTTCCCGTATCTGAAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: YHPVAKEVVTGF*ITAWLPVSEAS Trigger: GGATGCTTCAGATACGGGAAGCCAGGCTGTAATGCAGAAACCTGTGACTACTTCCTTAGCTACCGGATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053681.6 |
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