Pregenerated sensors for FRRS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033386Ensembl transcript IDs: ENSMUST00000040260.11, ENSMUST00000195905.5, ENSMUST00000199030.2, ENSMUST00000199626.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCGCGTCAGAGGAGACGCAGAGCCTGTAAGAGCGCCAGAGGCTaGAAAGAAAGGCACAGGGTGGAAACTGTTTCGGGAGCTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GPRQRRRRACKSARG*KERHRVETVSGAGR Trigger: CCTGCCAGCTCCCGAAACAGTTTCCACCCTGTGCCTTTCTTTCCAGCCTCTGGCGCTCTTACAGGCTCTGCGTCTCCTCTGACGCGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | CACAGGGTGGAAACTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTaGGCTCACAGCCACTGTGGCTGCCTGCGTAACGCCTGGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: HRVETVSGAGRISSL*AHSHCGCLRNAWAR Trigger: CCTTGCCCAGGCGTTACGCAGGCAGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAGTTTCCACCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | GGCTTCCCAGTTGGCATCTGCTGCGCTGTCCTTCCCACAGCCTCCTaGGCTGGTGCCGGATCCGGGAAGGATGAGTTATCATCTAACCTA | + |
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Preference number: 1 (lower is better) Translates to: GFPVGICCAVLPTAS*AGAGSGKDELSSNL Trigger: TAGGTTAGATGATAACTCATCCTTCCCGGATCCGGCACCAGCCCAGGAGGCTGTGGGAAGGACAGCGCAGCAGATGCCAACTGGGAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | GCAGAGCCTGTAAGAGCGCCAGAGGCTGGAAAGAAAGGCACAGGGTaGAAACTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: AEPVRAPEAGKKGTG*KLFRELAGSLHCEL Trigger: GAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAGTTTCCACCCTGTGCCTTTCTTTCCAGCCTCTGGCGCTCTTACAGGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | AAACGACACATAGCCGTCACTGGGTCCGCTCATTTCAACCATCACTaGCTGGTTGTCTCTGGTGAAGGACAGGAAGACGCATGCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: KRHIAVTGSAHFNHH*LVVSGEGQEDACRL Trigger: GAGCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGTCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
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| 3UTR GCA 90 bp | TGTCATTTCTCCAGTGTGAGGATGGAGGCATGGCTTCACACACTCTaGTCAAGCACGGTGCCACTGAGCCACATCTCCAGACCTTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: CHFSSVRMEAWLHTL*SSTVPLSHISRPFS Trigger: AGAAAAAGGTCTGGAGATGTGGCTCAGTGGCACCGTGCTTGAGCAGAGTGTGTGAAGCCATGCCTCCATCCTCACACTGGAGAAATGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | GTTAAGAAACAACTCCCACCCCCTAGCTACCCAGGCTCCACTCAATaGCCTGAATTCTCCACACAGTTGATCCTGCTGGATCCCACACAT | + |
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Preference number: 1 (lower is better) Translates to: VKKQLPPPSYPGSTQ*PEFSTQLILLDPTH Trigger: ATGTGTGGGATCCAGCAGGATCAACTGTGTGGAGAATTCAGGTCATTGAGTGGAGCCTGGGTAGCTAGGGGGTGGGAGTTGTTTCTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR GCA 90 bp | GCACAAGTAAGCATCATCGTCACCCATCCACTGGTCGTGAGAAAATaGAAACGACACATAGCCGTCACTGGGTCCGCTCATTTCAACCAT | + |
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Preference number: 1 (lower is better) Translates to: AQVSIIVTHPLVVRK*KRHIAVTGSAHFNH Trigger: ATGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGTCGTTTGCATTTTCTCACGACCAGTGGATGGGTGACGATGATGCTTACTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
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| 3UTR CCA 90 bp | GAGGCAGGCAGATCAGAGGTTCAGGGTTATCTTTGGTTATACAACTaGTTAAAGGCCAGCCTGGGCTACACCAAACCTGTCTCATTCCCA | + |
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Preference number: 1 (lower is better) Translates to: EAGRSEVQGYLWLYN*LKASLGYTKPVSFP Trigger: TGGGAATGAGACAGGTTTGGTGTAGCCCAGGCTGGCCTTTAACCAGTTGTATAACCAAAGATAACCCTGAACCTCTGATCTGCCTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | TTTAAATTGTTGCTGTGTCATTTCTCCAGTGTGAGGATGGAGGCATaGCTTCACACACTCTGCTCAAGCACGGTGCCACTGAGCCACATC | + |
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Preference number: 1 (lower is better) Translates to: FKLLLCHFSSVRMEA*LHTLCSSTVPLSHI Trigger: GATGTGGCTCAGTGGCACCGTGCTTGAGCAGAGTGTGTGAAGCCATGCCTCCATCCTCACACTGGAGAAATGACACAGCAACAATTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | CTTACAGTAGTATCTGCCTCCCTTCCCATCACCCACTTACAAAGATaGATCAGTGCCGGGAACAGGACAAGGAGGAACCAGGAAGATGAA | + |
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Preference number: 1 (lower is better) Translates to: LTVVSASLPITHLQR*ISAGNRTRRNQEDE Trigger: TTCATCTTCCTGGTTCCTCCTTGTCCTGTTCCCGGCACTGATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGATACTACTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | AGCAGACAACCTCCATCGCTGGCTTCTTTCACTTCGCATAGTATTTaGAAGGTTCATTCTACATCCACAGCGGCTATCAGTGCCTCGTTG | + |
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Preference number: 1 (lower is better) Translates to: SRQPPSLASFTSHSI*KVHSTSTAAISASL Trigger: CAACGAGGCACTGATAGCCGCTGTGGATGTAGAATGAACCTTCCAAATACTATGCGAAGTGAAAGAAGCCAGCGATGGAGGTTGTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | TGGTTTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTaGATACGTTCAGAACGCTGTACGATCGTCACTTCCCCGACACAA | + |
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Preference number: 1 (lower is better) Translates to: WFIPMSIISPCRTVR*IRSERCTIVTSPTQ Trigger: TTGTGTCGGGGAAGTGACGATCGTACAGCGTTCTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR GCA 90 bp | TGCACCACCCATCACTTGATAGGAACAGTGCTACAAGGAACGTTTTaGTCAGCTTTTATTGGTTTATTCCCATGTCAATCATCTCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: CTTHHLIGTVLQGTF*SAFIGLFPCQSSLR Trigger: ACGGAGAGATGATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTCCTATCAAGTGATGGGTGGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | CATCTTGTGCATCTACCAAGTTCCAAGACTCAATTTTTGTCAGGTTaGAATAAAAATGCACACCCACTAAGAAGTCACCTCCCACTCCCT | + |
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Preference number: 1 (lower is better) Translates to: HLVHLPSSKTQFLSG*NKNAHPLRSHLPLP Trigger: AGGGAGTGGGAGGTGACTTCTTAGTGGGTGTGCATTTTTATTTCAACCTGACAAAAATTGAGTCTTGGAACTTGGTAGATGCACAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | CTTGATAGGAACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATTaGTTTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGT | + |
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Preference number: 1 (lower is better) Translates to: LDRNSATRNVLLSFY*FIPMSIISPCRTVR Trigger: ACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTCCTATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 90 bp | AAATGCCCACTGAATAAATCAACAGCTACCTTTAGACAGAAATACTaGACACAAAGGAGAAAATCTCCTAACTGCTGGTCGGAAAACGTG | + |
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Preference number: 1 (lower is better) Translates to: KCPLNKSTATFRQKY*TQRRKSPNCWSENV Trigger: CACGTTTTCCGACCAGCAGTTAGGAGATTTTCTCCTTTGTGTTCAGTATTTCTGTCTAAAGGTAGCTGTTGATTTATTCAGTGGGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 90 bp | TTATGTGAATACACTGTCCTATGGAAAGACAAAACCATCTTAAAATaGACCATCCTTGTCACTCATCTTGTGCATCTACCAAGTTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LCEYTVLWKDKTILK*TILVTHLVHLPSSK Trigger: CTTGGAACTTGGTAGATGCACAAGATGAGTGACAAGGATGGTCCATTTTAAGATGGTTTTGTCTTTCCATAGGACAGTGTATTCACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTAGAGACAAGAACACTTaGTGGATCCGTTCACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFRELAGSLHCELTATVARDKNT*WIRSQG Trigger: CCCTTGTGAACGGATCCAGCAAGTGTTCTTGTCTCT...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR TCA 90 bp | CCACTCCCTGGCTCCACCCAGCCCCTAAGAAGCCTCAGTACCCTCTCAGTTCCTTTCCTTGTCTGTTATTaGACAGGACTGGTTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PLPGSTQPLRSLSTLSVPFLVCY*TGLVKT Trigger: TGTCTTAACCAGTCCTGTTCAATAACAGACAAGGAA...AGGAACTGAGAGGGTACTGAGGCTTCTTAGGGGCTGGGTGGAGCCAGGGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR TCA 90 bp | CATCATCGTCACCCATCCACTGGTCGTGAGAAAATGCAAACGACACATAGCCGTACTGGTTGTCTCTGGTaGAGGACAGGAAGACGCATG | + |
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Preference number: 2 (lower is better) Translates to: HHRHPSTGREKMQTTHSRTGCLW*RTGRRM Trigger: CATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGT...ACGGCTATGTGTCGTTTGCATTTTCTCACGACCAGTGGATGGGTGACGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTCCCTGGCTCCACCCAGCCCCTAAGAAGCCTCAGTACCCTCTCAGTTCCTCTACAAGGAACGTTTTaGTCAGCTTTTATTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: PLPGSTQPLRSLSTLSVPLQGTF*SAFIGL Trigger: TAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAG...AGGAACTGAGAGGGTACTGAGGCTTCTTAGGGGCTGGGTGGAGCCAGGGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTTGTCTTTTTCCAAGACAGGGCTTCTGTGTGTAACAGCCCTGGCTGTCCTGGGGGCCAAGCAGAAATaGTATCATCAGCTGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WLSFSKTGLLCVTALAVLGAKQK*YHQLKK Trigger: CTTTTTCAGCTGATGATATCATTTCTGCTTGGCCCC...CAGGACAGCCAGGGCTGTTACACACAGAAGCCCTGTCTTGGAAAAAGACAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGAAGGTTCATTCTACATCCACAGCGGCTATCAGTGCCTCGTTGCTTTGTAGACCAGATTGGCCTTaGACACACAGAGATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IWKVHSTSTAAISASLLCRPDWP*THRDPP Trigger: AGGAGGATCTCTGTGTGTTCAAGGCCAATCTGGTCT...ACAAAGCAACGAGGCACTGATAGCCGCTGTGGATGTAGAATGAACCTTCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CAA 90 bp | TTGGTTTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTaGAATACGTTCAGAACGCTGTACGATCGTCACTTCCCCGACACA | + |
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Preference number: 2 (lower is better) Translates to: LVYSHVNHLSVQNCS*NTFRTLYDRHFPDT Trigger: TGTGTCGGGGAAGTGACGATCGTACAGCGTTCTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CAA 90 bp | TGGCATTCCTCTGTCAACAGACATGTGGGCTGCACCACCCATCACTaGATAGGAACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: WHSSVNRHVGCTTHH*IGTVLQGTFCSAFI Trigger: AATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTCCTATCAAGTGATGGGTGGTGCAGCCCACATGTCTGTTGACAGAGGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGACTGTATATCTACTGTCTGGTCCTCACGGATGCACAAGTAAGCATCATACACATAGCCGTCACTaGGTCCGCTCATTTCAACCA | + |
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Preference number: 2 (lower is better) Translates to: RKTVYLLSGPHGCTSKHHTHSRH*VRSFQP Trigger: TGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGT...ATGATGCTTACTTGTGCATCCGTGAGGACCAGACAGTAGATATACAGTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTGAATACGTTCAGAATTCTCCACACAGTTaGTCCTGCTGGATCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LFPCQSSLRAELFVEYVQNSPHS*SCWIPH Trigger: GTGTGGGATCCAGCAGGATCAACTGTGTGGAGAATT...CTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATTGGTTTATTCCCATGTCAGGACTTAGTAGGTGCTaGAGGTGGTCGGCACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: NSATRNVLLSFYWFIPMSGLSRC*RWSAQA Trigger: AGCTTGTGCCGACCACCTGCAGCACCTACTAAGTCC...TGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATTGGTTTATTCCCATGTCAAAGAGCGCCAGAGGCTaGAAAGAAAGGCACAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: NSATRNVLLSFYWFIPMSKSARG*KERHRV Trigger: CACCCTGTGCCTTTCTTTCCAGCCTCTGGCGCTCTT...TGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CAA 90 bp | ATGAGTATGGCCGGGGTTAGACAAGGAAGGAAGGACATGGGAGCTTaGAGAAGGCTGATCCAGTTCATAAAGAACATAAAAGAACCGTTT | + |
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Preference number: 2 (lower is better) Translates to: MSMAGVRQGRKDMGA*RRLIQFIKNIKEPF Trigger: AAACGGTTCTTTTATGTTCTTTATGAACTGGATCAGCCTTCTCAAAGCTCCCATGTCCTTCCTTCCTTGTCTAACCCCGGCCATACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CAA 90 bp | CTGCACCACCCATCACTTGATAGGAACAGTGCTACAAGGAACGTTTaGCTCAGCTTTTATTGGTTTATTCCCATGTCAATCATCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: LHHPSLDRNSATRNV*LSFYWFIPMSIISP Trigger: CGGAGAGATGATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTCCTATCAAGTGATGGGTGGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCTAACAAAACCAAAACAGACTCAGTTTCTGCATGCTAACTTAACCATGATTAGGATCTCTTCACTGTaGGCTCACAGCCACTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLTKPKQTQFLHANLTMIRISSL*AHSHCG Trigger: GCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCT...AATCATGGTTAAGTTAGCATGCAGAAACTGAGTCTGTTTTGGTTTTGTTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR GCA 90 bp | TTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTGAATACGTTCAGGGAGACAGATGCCATTaGCACAAACATGGAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFPCQSSLRAELFVEYVQGDRCH*HKHGIQ Trigger: CTGAATTCCATGTTTGTGGCAATGGCATCTGTCTCC...CTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATTGGTTTATTCCCATGTCACACTTGAATGTGAGCTaGGAAACCCAGACTTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: NSATRNVLLSFYWFIPMSHLNVS*ETQTSA Trigger: CGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTG...TGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR CCA 90 bp | TTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTGAATACGTTCAGATGAAGATGGGGTTCTaGGGCCAAGCAGAAATGATA | + |
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Preference number: 2 (lower is better) Translates to: LFPCQSSLRAELFVEYVQMKMGF*GQAEMI Trigger: TATCATTTCTGCTTGGCCCCAGAACCCCATCTTCAT...CTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGCCTAAGAAAATTATCTTCATTTGCAGCAGGGTCAGAAGGATACAAAAGGTTCAGGGTTATCTTTaGTTATACAACTGGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLPKKIIFICSRVRRIQKVQGYL*LYNWLK Trigger: CTTTAACCAGTTGTATAACCAAAGATAACCCTGAAC...CTTTTGTATCCTTCTGACCCTGCTGCAAATGAAGATAATTTTCTTAGGCAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | GAGCCAAGAGCCACACGGCCCCCACGGCTTCCCAGTTaGCATCTGCTGCGCTGTCCTTCCCACAGCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EPRATRPPRLPS*HLLRCPSHSLL Trigger: CAGGAGGCTGTGGGAAGGACAGCGCAGCAGATGCCAACTGGGAAGCCGTGGGGGCCGTGTGGCTCTTGGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 72 bp | GAAACTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTaGGCTCACAGCCACTGTGGCTGCCTGCGTAACGCC | + |
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Preference number: 3 (lower is better) Translates to: ETVSGAGRISSL*AHSHCGCLRNA Trigger: GGCGTTACGCAGGCAGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR TCA 72 bp | CACAGCGGCTATCAGTGCCTCGTTGCTTTGTATGGCTaGGCAATGTCCCACTGCACACACACTCCACGTGGC | + |
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Preference number: 3 (lower is better) Translates to: HSGYQCLVALYG*AMSHCTHTPRG Trigger: GCCACGTGGAGTGTGTGTGCAGTGGGACATTGCTCAGCCATACAAAGCAACGAGGCACTGATAGCCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR GCA 72 bp | TCCAGTGTGAGGATGGAGGCATGGCTTCACACACTCTaGTCAAGCACGGTGCCACTGAGCCACATCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SSVRMEAWLHTL*SSTVPLSHISR Trigger: TCTGGAGATGTGGCTCAGTGGCACCGTGCTTGAGCAGAGTGTGTGAAGCCATGCCTCCATCCTCACACTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR GCA 72 bp | TCTCTTCACTGTGAGCTCACAGCCACTGTGGCTGCCTaGGTAACGCCTGGGCAAGGCCAAGCTAATCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SLHCELTATVAA*VTPGQGQANPH Trigger: ATGTGGATTAGCTTGGCCTTGCCCAGGCGTTACGCAGGCAGCCACAGTGGCTGTGAGCTCACAGTGAAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | CAGAGGAGACGCAGAGCCTGTAAGAGCGCCAGAGGCTaGAAAGAAAGGCACAGGGTGGAAACTGTTTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: QRRRRACKSARG*KERHRVETVSG Trigger: TCCCGAAACAGTTTCCACCCTGTGCCTTTCTTTCCAGCCTCTGGCGCTCTTACAGGCTCTGCGTCTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | TGGCTGAGCAATGTCCCACTGCACACACACTCCACGTaGCATTCCTCTGTCAACAGACATGTGGGCTGCACC | + |
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Preference number: 3 (lower is better) Translates to: WLSNVPLHTHST*HSSVNRHVGCT Trigger: GGTGCAGCCCACATGTCTGTTGACAGAGGAATGCCACGTGGAGTGTGTGTGCAGTGGGACATTGCTCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | AAATGCACACCCACTAAGAAGTCACCTCCCACTCCCTaGCTCCACCCAGCCCCTAAGAAGCCTCAGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: KCTPTKKSPPTP*LHPAPKKPQYP Trigger: AGGGTACTGAGGCTTCTTAGGGGCTGGGTGGAGCCAGGGAGTGGGAGGTGACTTCTTAGTGGGTGTGCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | GTAAGAGCGCCAGAGGCTGGAAAGAAAGGCACAGGGTaGAAACTGTTTCGGGAGCTGGCAGGATCTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: VRAPEAGKKGTG*KLFRELAGSLH Trigger: GTGAAGAGATCCTGCCAGCTCCCGAAACAGTTTCCACCCTGTGCCTTTCTTTCCAGCCTCTGGCGCTCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | CATCCACAGCGGCTATCAGTGCCTCGTTGCTTTGTATaGCTGAGCAATGTCCCACTGCACACACACTCCACG | + |
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Preference number: 3 (lower is better) Translates to: HPQRLSVPRCFV*LSNVPLHTHST Trigger: CGTGGAGTGTGTGTGCAGTGGGACATTGCTCAGCCATACAAAGCAACGAGGCACTGATAGCCGCTGTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
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| 3UTR CCA 72 bp | TTGCTGTGTCATTTCTCCAGTGTGAGGATGGAGGCATaGCTTCACACACTCTGCTCAAGCACGGTGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LLCHFSSVRMEA*LHTLCSSTVPL Trigger: CAGTGGCACCGTGCTTGAGCAGAGTGTGTGAAGCCATGCCTCCATCCTCACACTGGAGAAATGACACAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | GAAAGAAAGGCACAGGGTGGAAACTGTTTCGGGAGCTaGCAGGATCTCTTCACTGTGAGCTCACAGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ERKAQGGNCFGS*QDLFTVSSQPL Trigger: CAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAGTTTCCACCCTGTGCCTTTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | GTATCTGCCTCCCTTCCCATCACCCACTTACAAAGATaGATCAGTGCCGGGAACAGGACAAGGAGGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSASLPITHLQR*ISAGNRTRRNQ Trigger: CTGGTTCCTCCTTGTCCTGTTCCCGGCACTGATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | CCGTCACTGGGTCCGCTCATTTCAACCATCACTGACTaGTTGTCTCTGGTGAAGGACAGGAAGACGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLGPLISTITD*LSLVKDRKTHA Trigger: TGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTGGTTATTTAGCCCACTaGAATGTGAGCTGGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LFRELAGSLHCELTATVAGYLAH*NVSWET Trigger: GGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACC...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR TCA 72 bp | CGCTCATTTCAACCATCACTGACTGGTTGTCTCTGGTaGAGGACAGGAAGACGCATGCAGGCTCCTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSFQPSLTGCLW*RTGRRMQAPSL Trigger: CAGAGAAGGAGCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| 3UTR TCA 72 bp | ATAGCCGTCACTGGGTCCGCTCATTTCAACCATCACTaGCTGGTTGTCTCTGGTGAAGGACAGGAAGACGCA | + |
|
Preference number: 3 (lower is better) Translates to: IAVTGSAHFNHH*LVVSGEGQEDA Trigger: TGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTGACGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTAAGCATCATCGTCACCCATCCACTGGTCGTGAGAAAATGCAAACGACACACCATCACTGACTGGTaGTCTCTGGTGAAGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QVSIIVTHPLVVRKCKRHTITDW*SLVKDR Trigger: CCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGT...GTGTCGTTTGCATTTTCTCACGACCAGTGGATGGGTGACGATGATGCTTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| 3UTR TCA 72 bp | GAGGACCTAAGGACAGTTGATGGCTTCTCATGGGAGTaGGTCCATTTTCTTTGGGAGGGTGTGGCTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EDLRTVDGFSWE*VHFLWEGVAWK Trigger: TTTCCAAGCCACACCCTCCCAAAGAAAATGGACTCACTCCCATGAGAAGCCATCAACTGTCCTTAGGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR GCA 72 bp | CCCAGCTCCTGGGCCTTTCTAACTTACAGTAGTATCTaGCTCCCTTCCCATCACCCACTTACAAAGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSSWAFLTYSSI*LPSHHPLTKMD Trigger: ATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGATACTACTGTAAGTTAGAAAGGCCCAGGAGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | AAAGGCCCAGGTTATTTAGCCCACTTGAATGTGAGCTaGGAAACCCAGACTTCAGCGTTCCTCGATAGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: KGPGYLAHLNVS*ETQTSAFLDSD Trigger: ATCGCTATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACCTGGGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | ACAGAGGCAGGCAGATCAGAGGTTCAGGGTTATCTTTaGTTATACAACTGGTTAAAGGCCAGCCTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TEAGRSEVQGYL*LYNWLKASLGY Trigger: GTAGCCCAGGCTGGCCTTTAACCAGTTGTATAACCAAAGATAACCCTGAACCTCTGATCTGCCTGCCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | AGGACTCTTAGGAGACAGATGCCATTGCCACAAACATaGAATTCAGAAGTAACTGTGGCTACTCGGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTLRRQMPLPQT*NSEVTVATRAS Trigger: GGAGGCCCGAGTAGCCACAGTTACTTCTGAATTCCATGTTTGTGGCAATGGCATCTGTCTCCTAAGAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | GGTCGTGAGAAAATGCAAACGACACATAGCCGTCACTaGGTCCGCTCATTTCAACCATCACTGACTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GREKMQTTHSRH*VRSFQPSLTGC Trigger: ACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGTCGTTTGCATTTTCTCACGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCTCCCTTCCCATCACCCACTTACAAAGATGGATCAGTGCCGGGAACAGGGAAAATTATCTTCATTaGCAGCAGGGTCAGAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SASLPITHLQRWISAGNRENYLH*QQGQKD Trigger: ATCCTTCTGACCCTGCTGCAAATGAAGATAATTTTC...CCTGTTCCCGGCACTGATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCTCCCTTCCCATCACCCACTTACAAAGATGGATCAGTGCCGGGAACAGGGAAAAATGCATTATATaGCCCTTGGCATCAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SASLPITHLQRWISAGNREKCII*PLASEV Trigger: GACTTCTGATGCCAAGGGCAATATAATGCATTTTTC...CCTGTTCCCGGCACTGATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGTCTTTTTCCAAGACAGGGCTTCTGTGTGTAACAGCCCTGGCTGTCCTGTCTTGTAGGTTTTACTaGTTTGGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WLSFSKTGLLCVTALAVLSCRFY*FGVCVC Trigger: ACACACACACACACCAAACAAGTAAAACCTACAAGA...CAGGACAGCCAGGGCTGTTACACACAGAAGCCCTGTCTTGGAAAAAGACAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR TCA 72 bp | AGAGACAAGAACACTTGCTGGATCCGTTCACAAGGGTaGGGTTTAGCAACTGAGAGATTCGCAGCTTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RDKNTCWIRSQG*GLATERFAALF Trigger: GAACAAAGCTGCGAATCTCTCAGTTGCTAAACCTCACCCTTGTGAACGGATCCAGCAAGTGTTCTTGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | AGATCAGAGGTTCAGGGTTATCTTTGGTTATACAACTaGTTAAAGGCCAGCCTGGGCTACACCAAACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RSEVQGYLWLYN*LKASLGYTKPV Trigger: GACAGGTTTGGTGTAGCCCAGGCTGGCCTTTAACCAGTTGTATAACCAAAGATAACCCTGAACCTCTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | CCTCCATCGCTGGCTTCTTTCACTTCGCATAGTATTTaGAAGGTTCATTCTACATCCACAGCGGCTATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPSLASFTSHSI*KVHSTSTAAIS Trigger: ACTGATAGCCGCTGTGGATGTAGAATGAACCTTCCAAATACTATGCGAAGTGAAAGAAGCCAGCGATGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR TCA 72 bp | ATTCTCCACACAGTTGATCCTGCTGGATCCCACACATaGGAATCATATAAGAACTGTCCTGTGTGTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ILHTVDPAGSHT*ESYKNCPVCLD Trigger: GTCCAGACACACAGGACAGTTCTTATATGATTCTCATGTGTGGGATCCAGCAGGATCAACTGTGTGGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | AGCTGGGGTCATTACTCAGAGATGAAGATGGGGTTCTaGGGCCAAGCAGAAATGATATCATCAGCTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SWGHYSEMKMGF*GQAEMISSAEK Trigger: TTTTTCAGCTGATGATATCATTTCTGCTTGGCCCCAGAACCCCATCTTCATCTCTGAGTAATGACCCCAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTCATCTGCTATCCATTCCAGTTTACAGTTTTAAATCTGGCATGAGATGCGGTTATTTAGCCCACTaGAATGTGAGCTGGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: CLHLLSIPVYSFKSGMRCGYLAH*NVSWET Trigger: GGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACC...GCATCTCATGCCAGATTTAAAACTGTAAACTGGAATGGATAGCAGATGAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | AACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATTaGTTTATTCCCATGTCAATCATCTCTCCGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSATRNVLLSFY*FIPMSIISPCR Trigger: TCTGCACGGAGAGATGATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | TACACTGTCCTATGGAAAGACAAAACCATCTTAAAATaGACCATCCTTGTCACTCATCTTGTGCATCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: YTVLWKDKTILK*TILVTHLVHLP Trigger: TGGTAGATGCACAAGATGAGTGACAAGGATGGTCCATTTTAAGATGGTTTTGTCTTTCCATAGGACAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR TCA 72 bp | ATTCCAGTTTACAGTTTTAAATCTGGCATGAGATGCTaGGAGTCATGTCATCTCAGGTACAATGTTCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IPVYSFKSGMRC*ESCHLRYNVPL Trigger: TAAGGGAACATTGTACCTGAGATGACATGACTCTCAGCATCTCATGCCAGATTTAAAACTGTAAACTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR TCA 72 bp | CATCTACCAAGTTCCAAGACTCAATTTTTGTCAGGTTaGAATAAAAATGCACACCCACTAAGAAGTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: HLPSSKTQFLSG*NKNAHPLRSHL Trigger: GAGGTGACTTCTTAGTGGGTGTGCATTTTTATTTCAACCTGACAAAAATTGAGTCTTGGAACTTGGTAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTAACAAAACCAAAACAGACTCAGTTTCTGCATGCTAACTTAACCATGATTGAAAAGAACTTTTCCTaGTCTGTTATTGAACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KLTKPKQTQFLHANLTMIEKNFS*SVIEQD Trigger: GTCCTGTTCAATAACAGACAAGGAAAAGTTCTTTTC...AATCATGGTTAAGTTAGCATGCAGAAACTGAGTCTGTTTTGGTTTTGTTAGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CCA 72 bp | ACACATGAGAATCATATAAGAACTGTCCTGTGTGTCTaGACAATTTCATCTAGCACAATATTTAAGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: THENHIRTVLCV*TISSSTIFKIS Trigger: GCTTATCTTAAATATTGTGCTAGATGAAATTGTCCAGACACACAGGACAGTTCTTATATGATTCTCATGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | AGAGCCAAGAGCCACACGGCCCCCACGGCTTCCCAGTaGGCATCTGCTGCGCTGTCCTTCCCACAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAKSHTAPTASQ*ASAALSFPQPP Trigger: AGGAGGCTGTGGGAAGGACAGCGCAGCAGATGCCAACTGGGAAGCCGTGGGGGCCGTGTGGCTCTTGGCTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTTCCCACAGCCTCCTGGGCTGGTGCCGGATCCGGGAAGGATGAGTTATGTACGGGTGGTAGCCTaGGCGCCAACTCCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFPQPPGLVPDPGRMSYVRVVA*APTPAS Trigger: GGAGGCTGGAGTTGGCGCGCAGGCTACCACCCGTAC...ATAACTCATCCTTCCCGGATCCGGCACCAGCCCAGGAGGCTGTGGGAAGGACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | CCACTCCCTGGCTCCACCCAGCCCCTAAGAAGCCTCAGTACCCTCTCAGTTCCTGTCCCCACACTCCAGTaGGTCCAGTTAAACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPGSTQPLRSLSTLSVPVPTLQ*VQLNTC Trigger: GCAAGTGTTTAACTGGACTCACTGGAGTGTGGGGAC...AGGAACTGAGAGGGTACTGAGGCTTCTTAGGGGCTGGGTGGAGCCAGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | CTGTCCTTCCCACAGCCTCCTGGGCTGGTGCCGGATCCGGGAAGGATGAGTTATCATGTATCTCCAGAATaGCCTCAGTCCCGATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFPQPPGLVPDPGRMSYHVSPE*PQSRCA Trigger: GGCACATCGGGACTGAGGTCATTCTGGAGATACATG...ATAACTCATCCTTCCCGGATCCGGCACCAGCCCAGGAGGCTGTGGGAAGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CCACTCCCTGGCTCCACCCAGCCCCTAAGAAGCCTCAGTACCCTCTCAGTTCCTATCTGGGGCAGGGCTTaGAGCATCCCAGTAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPGSTQPLRSLSTLSVPIWGRA*SIPVDF Trigger: AAAGTCTACTGGGATGCTCCAAGCCCTGCCCCAGAT...AGGAACTGAGAGGGTACTGAGGCTTCTTAGGGGCTGGGTGGAGCCAGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | ACATGGAATTCAGAAGTAACTGTGGCTACTCGGGCCTCCCAGCTCCTGGGCCTTCCAGGACTCCAATGCTaGCCGTGGTCATCCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWNSEVTVATRASQLLGLPGLQC*PWSSMP Trigger: TGGCATGGATGACCACGGTCAGCATTGGAGTCCTGG...AAGGCCCAGGAGCTGGGAGGCCCGAGTAGCCACAGTTACTTCTGAATTCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTAGCATCCGATGCACCTaGAACCAAGCTGCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRELAGSLHCELTATVASIRCT*NQAASL Trigger: CAGGGAAGCAGCTTGGTTTCAGGTGCATCGGATGCT...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTTCCCACAGCCTCCTGGGCTGGTGCCGGATCCGGGAAGGATGAGTTATTCAGACTGTGGGCTGTaGTTATGTTGGGGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSFPQPPGLVPDPGRMSYSDCGL*LCWGII Trigger: GATGATCCCCCAACATAACCACAGCCCACAGTCTGA...ATAACTCATCCTTCCCGGATCCGGCACCAGCCCAGGAGGCTGTGGGAAGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGTACGGGTGGTAGCCTaGGCGCCAACTCCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHVRVVA*APTPAS Trigger: GGAGGCTGGAGTTGGCGCGCAGGCTACCACCCGTAC...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | AATGAGTCCTCCGGTATTACAGCGCCACCCACTGGCTGTAAGTCCTCACAGCAGGCTAGAAATCGTATGTaGTCTGGGGCAGGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NESSGITAPPTGCKSSQQARNRM*SGAGLG Trigger: TCCAAGCCCTGCCCCAGATCACATACGATTTCTAGC...CTGCTGTGAGGACTTACAGCCAGTGGGTGGCGCTGTAATACCGGAGGACTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTACACATAGCCGTCACTaGGTCCGCTCATTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRELAGSLHCELTATVATHSRH*VRSFQP Trigger: TGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGT...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTAGGTCTTCTGTGGACTaGGAAGATTCAGTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRELAGSLHCELTATVARSSVD*EDSVLA Trigger: TGCCAGGACTGAATCTTCCCAGTCCACAGAAGACCT...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | TCACTGGGTCCGCTCATTTCAACCATCACTGACTGGTaGTCTCTGGTGAAGGACAGGAAGACGCATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPLISTITDW*SLVKDRKTHAG Trigger: GCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTCTTTTTCCAAGACAGGGCTTCTGTGTGTAACAGCCCTGGCTGTCCTGCGTGTAAAGGTGGTCTaGAGGTTGCCAGCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSFSKTGLLCVTALAVLRVKVV*RLPAEA Trigger: AGCCTCTGCTGGCAACCTTCAGACCACCTTTACACG...CAGGACAGCCAGGGCTGTTACACACAGAAGCCCTGTCTTGGAAAAAGACAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TCGGACTTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATAATAGGCTCAGACTGTaGGCTGTGGTTATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLVGAAGGRHKLQVSPHNRLRL*AVVMLG Trigger: CCCCAACATAACCACAGCCCACAGTCTGAGCCTATT...ATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAAGTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TCGGACTTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATAACATTAAGGCACCATaGGCCTTCAAAAGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDLVGAAGGRHKLQVSPHNIKAP*AFKRGE Trigger: CTCACCCCTTTTGAAGGCTCATGGTGCCTTAATGTT...ATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAAGTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | CTGTTTCGGGAGCTGGCAGGATCTCTTCACTGTGAGCTCACAGCCACTGTGGCTACCTTCTTAAAAACATaGCCCTCTGCTTCTGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LFRELAGSLHCELTATVATFLKT*PSASAT Trigger: TGTCGCAGAAGCAGAGGGTCATGTTTTTAAGAAGGT...AGCCACAGTGGCTGTGAGCTCACAGTGAAGAGATCCTGCCAGCTCCCGAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATAGGTGGTCTGAAGGTTaGCAGCAGAGGCTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDRWSEG*QQRLKD Trigger: GTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCT...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | TCGGACTTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATCACAAAGCCCATCATTaGGTAGGTCTTCTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SDLVGAAGGRHKLQVSPHHKAHH*VGLLWT Trigger: AGTCCACAGAAGACCTACGCAATGATGGGCTTTGTG...ATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAAGTCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | GGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACCCAGGCACCTCAGTCCCGATGTaGCAGACCACAAAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GRHKLQVSPHFNDHHDPGTSVPM*QTTKPI Trigger: GATGGGCTTTGTGGTCTGGCACATCGGGACTGAGGT...GCCTGGGTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCCTTCCCATCACCCACTTACAAAGATGGATCAGTGCCGGGAACAGGTGCAGGCTCCTTCTCTaGATCACAGTTCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SASLPITHLQRWISAGNRCRLLL*ITVQRT Trigger: AGTCCTTTGAACTGTGATCCAGAGAAGGAGCCTGCA...CCTGTTCCCGGCACTGATCCATCTTTGTAAGTGGGTGATGGGAAGGGAGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAGCGATGCCTGCGTAGGTCTTCTGTaGACTGGGAAGATTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSWETQTSAFLDSDACVGLL*TGKIQS Trigger: GGACTGAATCTTCCCAGTCCACAGAAGACCTACGCA...GGCATCGCTATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATACCAAGCTGCTTCCCTaGGGAAGAAAGCTTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDTKLLP*GRKLST Trigger: GGTCGAAAGCTTTCTTCCTCAGGGAAGCAGCTTGGT...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATAGCATCCGATGCACCTaGAACCAAGCTGCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHSIRCT*NQAASL Trigger: CAGGGAAGCAGCTTGGTTTCAGGTGCATCGGATGCT...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTGTTGCCAGCAGAGGCTaGAGGACAGCTAAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RLFSPLECELGNPDFSVPVASRG*RTAKVI Trigger: GATGACCTTAGCTGTCCTTCAGCCTCTGCTGGCAAC...AGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACCGTGTAAAGGTGGTCTaGAGGTTGCCAGCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRHKLQVSPHFNDHHDRVKVV*RLPAEA Trigger: AGCCTCTGCTGGCAACCTTCAGACCACCTTTACACG...GTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATAGGTGGTCTGAAGGTTaGCAGCAGAGGCTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVGAAGGRHKLQVSPHFNRWSEG*QQRLKD Trigger: GTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCT...ATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | CACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAGCGATGCCCACAAAGCCCATCATTaGGTAGGTCTTCTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSWETQTSAFLDSDAHKAHH*VGLLWT Trigger: AGTCCACAGAAGACCTACGCAATGATGGGCTTTGTG...GGCATCGCTATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATCCTCCAGAGTCCCCCTaGAGTCCATCACAGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHPPESP*SPSQDN Trigger: GTTATCCTGTGATGGACTCCAGGGGGACTCTGGAGG...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGCTAGAAATCGTATGTaGTCTGGGGCAGGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHARNRM*SGAGLG Trigger: TCCAAGCCCTGCCCCAGATCACATACGATTTCTAGC...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | CACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAGCGATGCCAGTTCAAAGGACTCCTaGCACAGAACTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSWETQTSAFLDSDASSKDS*HRTSCS Trigger: GGAACAAGAAGTTCTGTGTCAGGAGTCCTTTGAACT...GGCATCGCTATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATACTGGTTGTCTCTGGTaGAGGACAGGAAGACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHTGCLW*RTGRRM Trigger: CATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGT...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACACCAAGCTGCTTCCCTaGGGAAGAAAGCTTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRHKLQVSPHFNDHHDTKLLP*GRKLST Trigger: GGTCGAAAGCTTTCTTCCTCAGGGAAGCAGCTTGGT...GTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGTCCCCACACTCCAGTaGGTCCAGTTAAACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHVPTLQ*VQLNTC Trigger: GCAAGTGTTTAACTGGACTCACTGGAGTGTGGGGAC...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATCATGTATCTCCAGAATaGCCTCAGTCCCGATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHHVSPE*PQSRCA Trigger: GGCACATCGGGACTGAGGTCATTCTGGAGATACATG...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAAGGTTCATTCTACATCCACAGCGGCTATCAGTGCCTCGTTGCTTTGTACCTCAGTCCCGATGTaGCAGACCACAAAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IWKVHSTSTAAISASLLCTSVPM*QTTKPI Trigger: GATGGGCTTTGTGGTCTGGCACATCGGGACTGAGGT...ACAAAGCAACGAGGCACTGATAGCCGCTGTGGATGTAGAATGAACCTTCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATTCAGACTGTGGGCTGTaGTTATGTTGGGGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDSDCGL*LCWGII Trigger: GATGATCCCCCAACATAACCACAGCCCACAGTCTGA...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CATCATCGTCACCCATCCACTGGTCGTGAGAAAATGCAAACGACACATAGCCGTTCAGACTGTGGGCTGTaGTTATGTTGGGGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: HHRHPSTGREKMQTTHSRSDCGL*LCWGII Trigger: GATGATCCCCCAACATAACCACAGCCCACAGTCTGA...ACGGCTATGTGTCGTTTGCATTTTCTCACGACCAGTGGATGGGTGACGATGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATAATAGGCTCAGACTGTaGGCTGTGGTTATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDNRLRL*AVVMLG Trigger: CCCCAACATAACCACAGCCCACAGTCTGAGCCTATT...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACATCTGGGGCAGGGCTTaGAGCATCCCAGTAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRHKLQVSPHFNDHHDIWGRA*SIPVDF Trigger: AAAGTCTACTGGGATGCTCCAAGCCCTGCCCCAGAT...GTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATAGGTCTTCTGTGGACTaGGAAGATTCAGTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDRSSVD*EDSVLA Trigger: TGCCAGGACTGAATCTTCCCAGTCCACAGAAGACCT...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | ACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACCCAGGCCCACAAAGTTGCCAGCAGAGGCTaGAGGACAGCTAAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSFRSLLILMIIMTQAHKVASRG*RTAKVI Trigger: GATGACCTTAGCTGTCCTTCAGCCTCTGCTGGCAAC...TTTGTGGGCCTGGGTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATGGAGGAGCATTTGGTTaGGAAATTACGGGACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLAHLNVSWETQTSAFLDGGAFG*EITGLG Trigger: TCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCC...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGGAGGAGCATTTGGTTaGGAAATTACGGGACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGAAGGRHKLQVSPHFNGGAFG*EITGLG Trigger: TCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCC...ATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATACACATAGCCGTCACTaGGTCCGCTCATTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHTHSRH*VRSFQP Trigger: TGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGT...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAACATTAAGGCACCATaGGCCTTCAAAAGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLAHLNVSWETQTSAFLDNIKAP*AFKRGE Trigger: CTCACCCCTTTTGAAGGCTCATGGTGCCTTAATGTT...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATTTCTGCGACAGTCAGTaGCTGAAGGATTTGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDFCDSQ*LKDLNP Trigger: AGGATTCAAATCCTTCAGTCACTGACTGTCGCAGAA...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR GCA 90 bp | GTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATGAACATTGCTGCCACTaGTATTATTCTAGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGAAGGRHKLQVSPHFNDEHCCH*YYSSGC Trigger: ACAGCCGCTAGAATAATAGCAGTGGCAGCAATGTTC...ATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGGCGTTGTCAAAGGTTaGGTTGTAGCTTTAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHGVVKG*VVALGV Trigger: GACACCTAAAGCTACAACCCAACCTTTGACAACGCC...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATTGCAGGCTCCTTCTCTaGATCACAGTTCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHCRLLL*ITVQRT Trigger: AGTCCTTTGAACTGTGATCCAGAGAAGGAGCCTGCA...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTTTCTGTCTTCTTGGATaGCCTTGTATGACTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFSPLECELGNPDFSVPFCLLG*PCMTHS Trigger: GCTGTGAGTCATACAAGGTCATCCAAGAAGACAGAA...AGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTGAATACGTTCAGACTGGTTGTCTCTGGTaGAGGACAGGAAGACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LFPCQSSLRAELFVEYVQTGCLW*RTGRRM Trigger: CATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGT...CTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCATCTGCTATCCATTCCAGTTTACAGTTTTAAATCTGGCATGAGATGCCCAGGACTCCAATGCTaGCCGTGGTCATCCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHLLSIPVYSFKSGMRCPGLQC*PWSSMP Trigger: TGGCATGGATGACCACGGTCAGCATTGGAGTCCTGG...GCATCTCATGCCAGATTTAAAACTGTAAACTGGAATGGATAGCAGATGAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATTTCTGCGACAGTCAGTaGCTGAAGGATTTGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHFCDSQ*LKDLNP Trigger: AGGATTCAAATCCTTCAGTCACTGACTGTCGCAGAA...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATACCTTCTTAAAAACATaGCCCTCTGCTTCTGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: YLAHLNVSWETQTSAFLDTFLKT*PSASAT Trigger: TGTCGCAGAAGCAGAGGGTCATGTTTTTAAGAAGGT...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAAAGGGAGGAGCATTTaGTTGGGAAATTACGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YLAHLNVSWETQTSAFLDKGRSI*LGNYGT Trigger: AGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTT...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | TCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTaGAATACGTTCAGAACGCTGTACGATCGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHVNHLSVQNCS*NTFRTLYDRHF Trigger: GAAGTGACGATCGTACAGCGTTCTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATGTTTCTTCTGAATaGACACTGTATGACGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVGAAGGRHKLQVSPHFNDVSSE*TLYDAV Trigger: GACAGCGTCATACAGTGTTCATTCAGAAGAAACATC...ATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACCCAGGCCCACAAAGGCGTTGTCAAAGGTTaGGTTGTAGCTTTAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSFRSLLILMIIMTQAHKGVVKG*VVALGV Trigger: GACACCTAAAGCTACAACCCAACCTTTGACAACGCC...TTTGTGGGCCTGGGTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | AGAATTACACATAAAGGCCCAGGTTATTTAGCCCACTaGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RITHKGPGYLAH*NVSWETQTSAF Trigger: GAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATAACCTGGGCCTTTATGTGTAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | AAGACCTTACCAGCAACATGTACAAAGCGAGCACCTTaGGCTGGTATCATTTCACTCAGAAGTTTAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTLPATCTKRAP*AGIISLRSLVG Trigger: TCCCACTAAACTTCTGAGTGAAATGATACCAGCCAAAGGTGCTCGCTTTGTACATGTTGCTGGTAAGGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTAACAAAACCAAAACAGACTCAGTTTCTGCATGCTAACTTAACCATGATTCCTCCAGAGTCCCCCTaGAGTCCATCACAGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLTKPKQTQFLHANLTMIPPESP*SPSQDN Trigger: GTTATCCTGTGATGGACTCCAGGGGGACTCTGGAGG...AATCATGGTTAAGTTAGCATGCAGAAACTGAGTCTGTTTTGGTTTTGTTAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCCTAAGAAAATTATCTTCATTTGCAGCAGGGTCAGAAGGATACAAAAGTGCGTAGGTCTTCTGTaGACTGGGAAGATTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPKKIIFICSRVRRIQKCVGLL*TGKIQS Trigger: GGACTGAATCTTCCCAGTCCACAGAAGACCTACGCA...CTTTTGTATCCTTCTGACCCTGCTGCAAATGAAGATAATTTTCTTAGGCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | AAGATGACAAAGAGGACTCTTAGGAGACAGATGCCATaGCCACAAACATGGAATTCAGAAGTAACTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMTKRTLRRQMP*PQTWNSEVTVA Trigger: AGCCACAGTTACTTCTGAATTCCATGTTTGTGGCAATGGCATCTGTCTCCTAAGAGTCCTCTTTGTCATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | GAACAGTGCTACAAGGAACGTTTTGCTCAGCTTTTATaGGTTTATTCCCATGTCAATCATCTCTCCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQCYKERFAQLL*VYSHVNHLSVQ Trigger: CTGCACGGAGAGATGATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | TATCATCTAACCTACAGCCCCAGATCCTCACACAAATaGAGTAGTACTAACAAGAGTGTGATTCACGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YHLTYSPRSSHK*SSTNKSVIHVV Trigger: GACTACGTGAATCACACTCTTGTTAGTACTACTCAATTTGTGTGAGGATCTGGGGCTGTAGGTTAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTCAGAGCATATGATGTAAGGAAAGATGTTTCTTCTGAATaGACACTGTATGACGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REREREREREFRAYDVRKDVSSE*TLYDAV Trigger: GACAGCGTCATACAGTGTTCATTCAGAAGAAACATC...TTTCCTTACATCATATGCTCTGAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCATCTGCTATCCATTCCAGTTTACAGTTTTAAATCTGGCATGAGATGCAAAGGGAGGAGCATTTaGTTGGGAAATTACGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLHLLSIPVYSFKSGMRCKGRSI*LGNYGT Trigger: AGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTT...GCATCTCATGCCAGATTTAAAACTGTAAACTGGAATGGATAGCAGATGAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| 3UTR CAA 72 bp | CCATCACTTGATAGGAACAGTGCTACAAGGAACGTTTaGCTCAGCTTTTATTGGTTTATTCCCATGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSLDRNSATRNV*LSFYWFIPMSI Trigger: GATTGACATGGGAATAAACCAATAAAAGCTGAGCAAAACGTTCCTTGTAGCACTGTTCCTATCAAGTGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTAACAAAACCAAAACAGACTCAGTTTCTGCATGCTAACTTAACCATGATTAGTTCAAAGGACTCCTaGCACAGAACTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTKPKQTQFLHANLTMISSKDS*HRTSCS Trigger: GGAACAAGAAGTTCTGTGTCAGGAGTCCTTTGAACT...AATCATGGTTAAGTTAGCATGCAGAAACTGAGTCTGTTTTGGTTTTGTTAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | CTGTCCTTCCCACAGCCTCCTGGGCTGGTGCCGGATCCGGGAAGGATGAGTTATACCATCACTGACTGGTaGTCTCTGGTGAAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFPQPPGLVPDPGRMSYTITDW*SLVKDR Trigger: CCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGT...ATAACTCATCCTTCCCGGATCCGGCACCAGCCCAGGAGGCTGTGGGAAGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TCGGACTTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATGATCTGGGGCAGGGCTaGGAGCATCCCAGTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SDLVGAAGGRHKLQVSPHDLGQG*EHPSRL Trigger: AAGTCTACTGGGATGCTCCAAGCCCTGCCCCAGATC...ATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAAGTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGTCCTCCGGTATTACAGCGCCACCCACTGGCTGTAAGTCCTCACAGCAGGATCTGGGGCAGGGCTaGGAGCATCCCAGTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: NESSGITAPPTGCKSSQQDLGQG*EHPSRL Trigger: AAGTCTACTGGGATGCTCCAAGCCCTGCCCCAGATC...CTGCTGTGAGGACTTACAGCCAGTGGGTGGCGCTGTAATACCGGAGGACTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS TCA 90 bp | CTCCTTGGGTCGTGTAAAGGTGGTCTGAAGGTTGCCAGCAGAGGCTaGAGGACAGCTAAGGTCATCACTGTACAACCGAGGTACGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGSCKGGLKVASRG*RTAKVITVQPRYGW Trigger: CCACCCGTACCTCGGTTGTACAGTGATGACCTTAGCTGTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCTTTACACGACCCAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS TCA 90 bp | CCACTTGGGTCGTGTAAAGGTGGTCTGAAGGTTGCCAGCAGAGGCTaGAGGACAGCTAAGGTCATCACTGTACAACCGAGGTACGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGSCKGGLKVASRG*RTAKVITVQPRYGW Trigger: CCACCCGTACCTCGGTTGTACAGTGATGACCTTAGCTGTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCTTTACACGACCCAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199030.2 |
||
| CDS TCA 90 bp | CACTGGGTCCGCTCATTTCAACCATCACTGACTGGTTGTCTCTGGTaGAGGACAGGAAGACGCATGCAGGCTCCTTCTCTGGATCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: HWVRSFQPSLTGCLW*RTGRRMQAPSLDHS Trigger: ACTGTGATCCAGAGAAGGAGCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGTTGAAATGAGCGGACCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGTCCTCCGGTATTACAGCGCCACCCACTGGCTGTAAGTCCTCACAGCAGCTGACACAGAACTTCTaGTTCCCACACTCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NESSGITAPPTGCKSSQQLTQNF*FPHSKA Trigger: TGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAG...CTGCTGTGAGGACTTACAGCCAGTGGGTGGCGCTGTAATACCGGAGGACTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | ACTGACTGGTTGTCTCTGGTGAAGGACAGGAAGACGCATGCAGGCTCCTTCTCTCTGACACAGAACTTCTaGTTCCCACACTCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TDWLSLVKDRKTHAGSFSLTQNF*FPHSKA Trigger: TGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAG...AGAGAAGGAGCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAACCAGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| CDS TCA 90 bp | ATTGCTGCCACTGCTATTATTCTAGCGGCTGTCCCCACACTCCAGTaGGTCCAGTTAAACACTTGCCTCCTTGGGTCGTGTAAAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IAATAIILAAVPTLQ*VQLNTCLLGSCKGG Trigger: ACCACCTTTACACGACCCAAGGAGGCAAGTGTTTAACTGGACTCACTGGAGTGTGGGGACAGCCGCTAGAATAATAGCAGTGGCAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CCA 90 bp | CTGTGGGCTGTGGTTATGTTGGGGGATCATCCCACCACAGGACATTaGTACTTTGCCATTGGGATAAGCAGTCACAGAGCAAGTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWAVVMLGDHPTTGH*YFAIGISSHRASEQ Trigger: TTGCTCACTTGCTCTGTGACTGCTTATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGATGATCCCCCAACATAACCACAGCCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199626.2 |
||
| CDS CCA 90 bp | GTTGTCTCTGGTGAAGGACAGGAAGACGCATGCAGGCTCCTTCTCTaGATCACAGTTCAAAGGACTCCTGACACAGAACTTCTTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSGEGQEDACRLLL*ITVQRTPDTELLVP Trigger: GGGAACAAGAAGTTCTGTGTCAGGAGTCCTTTGAACTGTGATCCAGAGAAGGAGCCTGCATGCGTCTTCCTGTCCTTCACCAGAGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGTCCTCCGGTATTACAGCGCCACCCACTGGCTGTAAGTCCTCACAGCAGCCATTCCTAGGAACATaGCTGCCACTGCTATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: NESSGITAPPTGCKSSQQPFLGT*LPLLLF Trigger: GAATAATAGCAGTGGCAGCAATGTTCCTAGGAATGG...CTGCTGTGAGGACTTACAGCCAGTGGGTGGCGCTGTAATACCGGAGGACTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS CCA 90 bp | TGTGCCAGACCACAAAGCCCATCATTGCGTAGGTCTTCTGTGGACTaGGAAGATTCAGTCCTGGCAAATCCATTCCTAGGAACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CARPQSPSLRRSSVD*EDSVLANPFLGTLL Trigger: CAGCAATGTTCCTAGGAATGGATTTGCCAGGACTGAATCTTCCCAGTCCACAGAAGACCTACGCAATGATGGGCTTTGTGGTCTGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199030.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAAACGACACATAGCCGTCACTGGGTCCGCTCATTTCAACCATCACTGACTTCCCACCACAGGACATaGGTACTTTGCCATTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MQTTHSRHWVRSFQPSLTSHHRT*VLCHWD Trigger: ATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGA...AGTCAGTGATGGTTGAAATGAGCGGACCCAGTGACGGCTATGTGTCGTTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199626.2 |
||
| CDS-3UTR CAA 90 bp | ATTTGGAAGGTTCATTCTACATCCACAGCGGCTATCAGTGCCTCGTTGCTTTGTTGGGCTGTGGTTATGTaGGGGGATCATCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: IWKVHSTSTAAISASLLCWAVVM*GDHPTT Trigger: TGTGGTGGGATGATCCCCCAACATAACCACAGCCCA...ACAAAGCAACGAGGCACTGATAGCCGCTGTGGATGTAGAATGAACCTTCCAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATACCATCACTGACTGGTaGTCTCTGGTGAAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHTITDW*SLVKDR Trigger: CCTGTCCTTCACCAGAGACAACCAGTCAGTGATGGT...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATTCCCACCACAGGACATaGGTACTTTGCCATTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAGGRHKLQVSPHFNDHHSHHRT*VLCHWD Trigger: ATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGA...ATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTTCAGGTCTCTCCTCATTTTAATGATCATCATGACCCAGGCCCACAAATGGGCTGTGGTTATGTaGGGGGATCATCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSFRSLLILMIIMTQAHKWAVVM*GDHPTT Trigger: TGTGGTGGGATGATCCCCCAACATAACCACAGCCCA...TTTGTGGGCCTGGGTCATGATGATCATTAAAATGAGGAGAGACCTGAAGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATCTGACACAGAACTTCTaGTTCCCACACTCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVGAAGGRHKLQVSPHFNLTQNF*FPHSKA Trigger: TGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAG...ATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS GCA 90 bp | CTGTCAAGTAGGAAGACTGTATATCTACTGTCTGGTCCTCACGGATaGACAAGTAAGCATCATCGTCACCCATCCACTGGTCGTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSRKTVYLLSGPHG*TSKHHRHPSTGREK Trigger: TTTCTCACGACCAGTGGATGGGTGACGATGATGCTTACTTGTGCATCCGTGAGGACCAGACAGTAGATATACAGTCTTCCTACTTGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TGGTTGTCTTTTTCCAAGACAGGGCTTCTGTGTGTAACAGCCCTGGCTGTCCTGAAGGCACTGAATGGTTaGGTTAAGTGTGAGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WLSFSKTGLLCVTALAVLKALNG*VKCETE Trigger: TTCTGTCTCACACTTAACCAAACCATTCAGTGCCTT...CAGGACAGCCAGGGCTGTTACACACAGAAGCCCTGTCTTGGAAAAAGACAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATACCCTCCTACACTCTTaGGAGTGTCTGTTACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YLAHLNVSWETQTSAFLDTLLHS*ECLLRC Trigger: ACAACGTAACAGACACTCCAAAGAGTGTAGGAGGGT...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTAGGTGCTGCAGGTGGTCGGCACAAGCTTCAGGTCTCTCCTCATTTTAATCCATTCCTAGGAACATaGCTGCCACTGCTATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGAAGGRHKLQVSPHFNPFLGT*LPLLLF Trigger: GAATAATAGCAGTGGCAGCAATGTTCCTAGGAATGG...ATTAAAATGAGGAGAGACCTGAAGCTTGTGCCGACCACCTGCAGCACCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CCA 90 bp | CAAAGGTTGGGTTGTAGCTTTAGGTGTCGTAAAGGGAGGAGCATTTaGTTGGGAAATTACGGGACTCGGAATCTTCACCCAGTAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRLGCSFRCRKGRSI*LGNYGTRNLHPVDF Trigger: AAAATCTACTGGGTGAAGATTCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTTACGACACCTAAAGCTACAACCCAACCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TATTTAGCCCACTTGAATGTGAGCTGGGAAACCCAGACTTCAGCGTTCCTCGATAAGGCACTGAATGGTTaGGTTAAGTGTGAGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YLAHLNVSWETQTSAFLDKALNG*VKCETE Trigger: TTCTGTCTCACACTTAACCAAACCATTCAGTGCCTT...ATCGAGGAACGCTGAAGTCTGGGTTTCCCAGCTCACATTCAAGTGGGCTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TTATTCCCATGTCAATCATCTCTCCGTGCAGAACTGTTCGTTGAATACGTTCAGACCCTCCTACACTCTTaGGAGTGTCTGTTACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPCQSSLRAELFVEYVQTLLHS*ECLLRC Trigger: ACAACGTAACAGACACTCCAAAGAGTGTAGGAGGGT...CTGAACGTATTCAACGAACAGTTCTGCACGGAGAGATGATTGACATGGGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195905.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCATCTGCTATCCATTCCAGTTTACAGTTTTAAATCTGGCATGAGATGCTCCCACCACAGGACATaGGTACTTTGCCATTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLHLLSIPVYSFKSGMRCSHHRT*VLCHWD Trigger: ATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGA...GCATCTCATGCCAGATTTAAAACTGTAAACTGGAATGGATAGCAGATGAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS TCA 72 bp | GAACATTGCTGCCACTTGGGTCGTGTAAAGGTGGTCTaGAGGTTGCCAGCAGAGGCTGAAGGACAGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EHCCHLGRVKVV*RLPAEAEGQLR Trigger: CCTTAGCTGTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCTTTACACGACCCAAGTGGCAGCAATGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199030.2 |
||
| CDS TCA 72 bp | TCGTGTAAAGGTGGTCTGAAGGTTGCCAGCAGAGGCTaGAGGACAGCTAAGGTCATCACTGTACAACCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCKGGLKVASRG*RTAKVITVQPR Trigger: CCTCGGTTGTACAGTGATGACCTTAGCTGTCCTTCAGCCTCTGCTGGCAACCTTCAGACCACCTTTACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199030.2 |
||
| CDS TCA 72 bp | ACTGCTATTATTCTAGCGGCTGTCCCCACACTCCAGTaGGTCCAGTTAAACACTTGCCTCCTTGGGTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TAIILAAVPTLQ*VQLNTCLLGSC Trigger: ACACGACCCAAGGAGGCAAGTGTTTAACTGGACTCACTGGAGTGTGGGGACAGCCGCTAGAATAATAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CCA 72 bp | CTGACTCACTGTGATTTGGTGAATAGGCTCAGACTGTaGGCTGTGGTTATGTTGGGGGATCATCCCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: LTHCDLVNRLRL*AVVMLGDHPTT Trigger: TGTGGTGGGATGATCCCCCAACATAACCACAGCCCACAGTCTGAGCCTATTCACCAAATCACAGTGAGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199626.2 |
||
| CDS CCA 72 bp | GTGGTTATGTTGGGGGATCATCCCACCACAGGACATTaGTACTTTGCCATTGGGATAAGCAGTCACAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVMLGDHPTTGH*YFAIGISSHRA Trigger: TGCTCTGTGACTGCTTATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGATGATCCCCCAACATAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199626.2 |
||
| CDS CCA 72 bp | CCACAAAGCCCATCATTGCGTAGGTCTTCTGTGGACTaGGAAGATTCAGTCCTGGCAAATCCATTCCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQSPSLRRSSVD*EDSVLANPFLG Trigger: TCCTAGGAATGGATTTGCCAGGACTGAATCTTCCCAGTCCACAGAAGACCTACGCAATGATGGGCTTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199030.2 |
||
| CDS CAA 72 bp | TGTGGTTATGTTGGGGGATCATCCCACCACAGGACATaGGTACTTTGCCATTGGGATAAGCAGTCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CGYVGGSSHHRT*VLCHWDKQSQS Trigger: GCTCTGTGACTGCTTATCCCAATGGCAAAGTACCAATGTCCTGTGGTGGGATGATCCCCCAACATAACCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199626.2 |
||
| CDS CAA 72 bp | TTGGTGAATAGGCTCAGACTGTGGGCTGTGGTTATGTaGGGGGATCATCCCACCACAGGACATTGGTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVNRLRLWAVVM*GDHPTTGHWYF Trigger: AAAGTACCAATGTCCTGTGGTGGGATGATCCCCCAACATAACCACAGCCCACAGTCTGAGCCTATTCACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 ENSMUST00000199626.2 |
||
| CDS CCA 72 bp | GGTTGTAGCTTTAGGTGTCGTAAAGGGAGGAGCATTTaGTTGGGAAATTACGGGACTCGGAATCTTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GCSFRCRKGRSI*LGNYGTRNLHP Trigger: TGGGTGAAGATTCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTTACGACACCTAAAGCTACAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CAA 90 bp | CTGACACAGAACTTCTTGTTCCCACACTCGAAGGCACTGAATGGTTaGGTTAAGTGTGAGACAGAAGGTGGCGTTGTCAAAGGTTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LTQNFLFPHSKALNG*VKCETEGGVVKGWV Trigger: AACCCAACCTTTGACAACGCCACCTTCTGTCTCACACTTAACCAAACCATTCAGTGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CAA 90 bp | TCCTTCTCTGGATCACAGTTCAAAGGACTCCTGACACAGAACTTCTaGTTCCCACACTCGAAGGCACTGAATGGTTTGGTTAAGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSGSQFKGLLTQNF*FPHSKALNGLVKCE Trigger: CTCACACTTAACCAAACCATTCAGTGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAGGAGTCCTTTGAACTGTGATCCAGAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CAA 72 bp | TGTAGCTTTAGGTGTCGTAAAGGGAGGAGCATTTGGTaGGGAAATTACGGGACTCGGAATCTTCACCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: CSFRCRKGRSIW*GNYGTRNLHPV Trigger: TACTGGGTGAAGATTCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTTACGACACCTAAAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
||
| CDS CAA 72 bp | GGATCACAGTTCAAAGGACTCCTGACACAGAACTTCTaGTTCCCACACTCGAAGGCACTGAATGGTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: GSQFKGLLTQNF*FPHSKALNGLV Trigger: AACCAAACCATTCAGTGCCTTCGAGTGTGGGAACAAGAAGTTCTGTGTCAGGAGTCCTTTGAACTGTGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
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| CDS CAA 72 bp | AACTTCTTGTTCCCACACTCGAAGGCACTGAATGGTTaGGTTAAGTGTGAGACAGAAGGTGGCGTTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: NFLFPHSKALNG*VKCETEGGVVK Trigger: TTTGACAACGCCACCTTCTGTCTCACACTTAACCAAACCATTCAGTGCCTTCGAGTGTGGGAACAAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
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| CDS CAA 90 bp | AGGTTGGGTTGTAGCTTTAGGTGTCGTAAAGGGAGGAGCATTTGGTaGGGAAATTACGGGACTCGGAATCTTCACCCAGTAGATTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RLGCSFRCRKGRSIW*GNYGTRNLHPVDFK Trigger: TTTAAAATCTACTGGGTGAAGATTCCGAGTCCCGTAATTTCCCAACCAAATGCTCCTCCCTTTACGACACCTAAAGCTACAACCCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040260.11 ENSMUST00000195905.5 |
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