RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMPD3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042425

Ensembl transcript IDs: ENSMUST00000208130.2

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCACTaGCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: ALSPWLGAVAYRYCH*PLGAADARRSSRSW
Trigger: CCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp GAGCCCATGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTaGCTTGGCGCTGTGGCCTACCGCTACTGCCACTGCCCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: EPMVGGRIWNSALSP*LGAVAYRYCHCPLG
Trigger: CCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCATGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp TGGCTCCTGCCAGGTACAAGGGAGCCCATGGTGGGTGGGCGCATCTaGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGC +
Preference number: 1 (lower is better)
Translates to: WLLPGTREPMVGGRI*NSALSPWLGAVAYR
Trigger: GCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCATGGGCTCCCTTGTACCTGGCAGGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 90 bp AATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTaGCACTGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGG +
Preference number: 1 (lower is better)
Translates to: NSALSPWLGAVAYRY*HCPLGAADARRSSR
Trigger: CCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp GTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTaGCCTACCGCTACTGCCACTGCCCTCTTGGGGCAGCAGATGCTA +
Preference number: 1 (lower is better)
Translates to: VGASGIAPSLLGLAL*PTATATALLGQQML
Trigger: TAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp TGGCTGTATTCTGCGCATATCCAACCTGGGCACTGGCCCTTGAGGTaGCTCCTGCCAGGTACAAGGGAGCCCATGGTGGGTGGGCGCATC +
Preference number: 1 (lower is better)
Translates to: WLYSAHIQPGHWPLR*LLPGTREPMVGGRI
Trigger: GATGCGCCCACCCACCATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR TCA 90 bp AGACATGGCTGTATTCTGCGCATATCCAACCTGGGCACTGGCCCTTaGGGTGGCTCCTGCCAGGTACAAGGGAGCCCATGGTGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: RHGCILRISNLGTGP*GGSCQVQGSPWWVG
Trigger: GCCCACCCACCATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp TCCCAAGGCTGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATaGCTGTATTCTGCGCATATCCAACCTGGGCACTGGCCCTTGAGG +
Preference number: 1 (lower is better)
Translates to: SQGCHPVEPATDSQT*LYSAHIQPGHWPLR
Trigger: CCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCAGCCTTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp GACAGCCAGACATGGCTGTATTCTGCGCATATCCAACCTGGGCACTaGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGCCCATGGTG +
Preference number: 1 (lower is better)
Translates to: DSQTWLYSAHIQPGH*PLRWLLPGTREPMV
Trigger: CACCATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCATGTCTGGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp GCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCCACTaGCTGCATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGA +
Preference number: 1 (lower is better)
Translates to: ANTLRAVVVGERVPH*LHLWPIKHLGPVGG
Trigger: TCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATGCAGCCAGTGGGGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 90 bp CAGCTCCTGCACAGGGCTGGACTGAGCCGGGCAGGCTCTGATAACTaGGCTGGGTCTTCCCAGAGCAGACATTTTCACCAGGTACCTTAC +
Preference number: 1 (lower is better)
Translates to: QLLHRAGLSRAGSDN*AGSSQSRHFHQVPY
Trigger: GTAAGGTACCTGGTGAAAATGTCTGCTCTGGGAAGACCCAGCGCAGTTATCAGAGCCTGCCCGGCTCAGTCCAGCCCTGTGCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp AGGGCAGTGGTCGTGGGGGAAAGGGTTCCCCACTGGCTGCATCTCTaGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAG +
Preference number: 1 (lower is better)
Translates to: RAVVVGERVPHWLHL*PIKHLGPVGGESRK
Trigger: CTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATGCAGCCAGTGGGGAACCCTTTCCCCCACGACCACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 90 bp GCTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTaGCACTCAGGAGGCTTTATTGCGCTAGGATCACCAAGGATAGGC +
Preference number: 1 (lower is better)
Translates to: AGFCRRTPLPLAGRP*HSGGFIALGSPRIG
Trigger: GCCTATCCTTGGTGATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR TCA 90 bp CTTCCCAGAGCAGACATTTTCACCAGGTACCTTACCCAAAACAAGTaGGGTGATCTCAGAGGCTTGCTCCCTAGTGGACTGAGCTGCCCT +
Preference number: 1 (lower is better)
Translates to: LPRADIFTRYLTQNK*GDLRGLLPSGLSCP
Trigger: AGGGCAGCTCAGTCCACTAGGGAGCAAGCCTCTGAGATCACCTCACTTGTTTTGGGTAAGGTACCTGGTGAAAATGTCTGCTCTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp AGAGAGACCAACGCTGGCTGGGAGGGTGTGGGAAACAAGCAGCTATaGAGAAGTGGACGAGAAGCAATCTATACAGAAGAAACATTGGCT +
Preference number: 1 (lower is better)
Translates to: RETNAGWEGVGNKQL*RSGREAIYTEETLA
Trigger: AGCCAATGTTTCTTCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCCTCCCAGCCAGCGTTGGTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 90 bp CAACGCTGGCTGGGAGGGTGTGGGAAACAAGCAGCTATGGAGAAGTaGACGAGAAGCAATCTATACAGAAGAAACATTGGCTTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: QRWLGGCGKQAAMEK*TRSNLYRRNIGFLC
Trigger: ACAAAGAAAGCCAATGTTTCTTCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCCTCCCAGCCAGCGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 90 bp CTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCACTGCCCTCTaGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: LLGLALWPTATATAL*GQQMLGGARGPGSP
Trigger: GGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 90 bp CCATGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTaGGCGCTGTGGCCTACCGCTACTGCCACTGCCCTCTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PWWVGASGIAPSLLG*ALWPTATATALLGQ
Trigger: CTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGTCCTGGCTCCCCCGGTaGCCAACTCAGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: HIQPGHWPLRWLLPGTRESWLPR*PTQSRR
Trigger: CCTCCTGCTCTGAGTTGGGCACCGGGGGAGCCAGGA...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 90 bp GAGCTACTGAGCCTGGGGGCAAGGGCTCCCAAGGCTGCCACCCGGTaGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATA +
Preference number: 2 (lower is better)
Translates to: ELLSLGARAPKAATR*SQPLTARHGCILRI
Trigger: TATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCAGCCTTGGGAGCCCTTGCCCCCAGGCTCAGTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGAAGGGCTCCCAAGGCTaGCACCCGGTTGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKKGSQG*HPVEPA
Trigger: GGCTGGCTCAACCGGGTGGCAGCCTTGGGAGCCCTT...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCAGACTGATAGGCTCTTaGACCCTGACTGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSRLIGS*TLTGPA
Trigger: TGCTGGGCCAGTCAGGGTCCAAGAGCCTATCAGTCT...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGAGAGAGGGAGAGAGGTaGGGGACTGCACCGGGTAAG +
Preference number: 2 (lower is better)
Translates to: LASVEGHPSPLLGDLATQREGER*GTAPGK
Trigger: CTTACCCGGTGCAGTCCCGCACCTCTCTCCCTCTCT...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCACACAAAGCTCAAACTTaGGGCCGTGGATGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPHKAQT*GRGWGG
Trigger: CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTG...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGTGGACTGAGCTGCCCTaGCCCTTCACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKWTELP*PFTDGQ
Trigger: CTGCCCATCAGTGAAGGGGCAGGGCAGCTCAGTCCA...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATCACTGGCCCTTGAGGTaGCTCCTGCCAGGTACAAGG +
Preference number: 2 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHHWPLR*LLPGTR
Trigger: CCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTG...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCATGGGCAGGGCACTTTaGGGATGGCTGGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PPPCWETLPLRRLYCARIMGRAL*GWLVWS
Trigger: GCTCCACACCAGCCATCCCCAAAGTGCCCTGCCCAT...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCTACCGCTACTGCCACTaGCCTCTTGGGGCAGCAGAT +
Preference number: 2 (lower is better)
Translates to: PPPCWETLPLRRLYCARIYRYCH*PLGAAD
Trigger: ATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTA...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR GCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGCAGGCTCTGATAACTaGGCTGGGTCTTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: PPPCWETLPLRRLYCARIAGSDN*AGSSQS
Trigger: GCTCTGGGAAGACCCAGCGCAGTTATCAGAGCCTGC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCTCTTGGACCCTGACTaGCCCAGCAGAAACACACAC +
Preference number: 2 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKLLDPD*PSRNTH
Trigger: GTGTGTGTTTCTGCTGGGCCAGTCAGGGTCCAAGAG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGATCCAACCTGGGCACTaGCCCTTGAGGTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGIQPGH*PLRWLL
Trigger: CAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGAT...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR TCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCCAAAACAAGTGAGGTaGTCTCAGAGGCTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKPKQVR*SQRLAP
Trigger: GGGAGCAAGCCTCTGAGATCACCTCACTTGTTTTGG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 90 bp GCTAAGCCTGCAGCCCTTAATAGAGCCCAGTCTAGGGAGTTAGCCTaGGAGACTGATAGGCTCTTGGACCCTGACTGGCCCAGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: AKPAALNRAQSRELA*ETDRLLDPDWPSRN
Trigger: GTTTCTGCTGGGCCAGTCAGGGTCCAAGAGCCTATCAGTCTCCAAGGCTAACTCCCTAGACTGGGCTCTATTAAGGGCTGCAGGCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR TCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGAGCAGCGGCAATACATaGGTGTCAAGGAGGATGCTA +
Preference number: 2 (lower is better)
Translates to: GEEEDHANTLRAVVVGERSSGNT*VSRRML
Trigger: TAGCATCCTCCTTGACACTCATGTATTGCCGCTGCT...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAACTTGGGGCCGTGGATaGGGAGGGGACAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRTWGRG*GGDKPG
Trigger: CCCAGGCTTGTCCCCTCCCCATCCACGGCCCCAAGT...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 90 bp CATAGCTACATCAAACTCCTAAGGACAGTCTGTCTGGTAGAGATGTaGAGAGAGGAGCCCATGCCTCTGGCAACAGCTCCTGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: HSYIKLLRTVCLVEM*REEPMPLATAPAQG
Trigger: GCCCTGTGCAGGAGCTGTTGCCAGAGGCATGGGCTCCTCTCTCAACATCTCTACCAGACAGACTGTCCTTAGGAGTTTGATGTAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGCAGCTATGGAGAAGTaGACGAGAAGCAATCTATAC +
Preference number: 2 (lower is better)
Translates to: GEEEDHANTLRAVVVGERAAMEK*TRSNLY
Trigger: GTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGC...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGAGTACAAGGGAGCCCATaGTGGGTGGGCGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: HIRTRDFTQASHTVMKERVQGSP*WVGASG
Trigger: TCCAGATGCGCCCACCCACCATGGGCTCCCTTGTAC...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGAATTCCCTTCCAGATaGTTCCAGAGAGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYREFPSR*FQRGRE
Trigger: CTCTCTCCCTCTCTGGAACCATCTGGAAGGGAATTC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp GGAGCTACTGAGCCTGGGGGCAAGGGCTCCCAAGGCTaGCACCCGGTTGAGCCAGCCACTGACAGCCAGACA +
Preference number: 3 (lower is better)
Translates to: GATEPGGKGSQG*HPVEPATDSQT
Trigger: TGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCAGCCTTGGGAGCCCTTGCCCCCAGGCTCAGTAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp CCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCACTaGCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCG +
Preference number: 3 (lower is better)
Translates to: PWLGAVAYRYCH*PLGAADARRSS
Trigger: CGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp GTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTaGCTTGGCGCTGTGGCCTACCGCTACTGCCACTGC +
Preference number: 3 (lower is better)
Translates to: VGGRIWNSALSP*LGAVAYRYCHC
Trigger: GCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp CTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTaGCACTGCCCTCTTGGGGCAGCAGATGCTAGGAGG +
Preference number: 3 (lower is better)
Translates to: LSPWLGAVAYRY*HCPLGAADARR
Trigger: CCTCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp TCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTaGCCTACCGCTACTGCCACTGCCCTCTTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SGIAPSLLGLAL*PTATATALLGQ
Trigger: CTGCCCCAAGAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp CCAGGTACAAGGGAGCCCATGGTGGGTGGGCGCATCTaGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTG +
Preference number: 3 (lower is better)
Translates to: PGTREPMVGGRI*NSALSPWLGAV
Trigger: CACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCATGGGCTCCCTTGTACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp TCTGCGCATATCCAACCTGGGCACTGGCCCTTGAGGTaGCTCCTGCCAGGTACAAGGGAGCCCATGGTGGGT +
Preference number: 3 (lower is better)
Translates to: SAHIQPGHWPLR*LLPGTREPMVG
Trigger: ACCCACCATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp TACAGCTCTGTGGTGGGCGTAATGGCAAGGGACCTTTaGCCTCACAGTGACGCCCAGAGGCCAGGAAGGGGT +
Preference number: 3 (lower is better)
Translates to: YSSVVGVMARDL*PHSDAQRPGRG
Trigger: ACCCCTTCCTGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCACAGAGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp GGGCAGTGGTCGTGGGGGAAAGGGTTCCCCACTGGCTaGATCTCTGGCCCATTAAGCATCTTGGTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: GQWSWGKGFPTG*ISGPLSILVLW
Trigger: CCACAGGACCAAGATGCTTAATGGGCCAGAGATGCAGCCAGTGGGGAACCCTTTCCCCCACGACCACTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR TCA 72 bp TGTATTCTGCGCATATCCAACCTGGGCACTGGCCCTTaGGGTGGCTCCTGCCAGGTACAAGGGAGCCCATGG +
Preference number: 3 (lower is better)
Translates to: CILRISNLGTGP*GGSCQVQGSPW
Trigger: CCATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATaGCTGTATTCTGCGCATATCCAACCTGGGCACTGG +
Preference number: 3 (lower is better)
Translates to: CHPVEPATDSQT*LYSAHIQPGHW
Trigger: CCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp CTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCCACTaGCTGCATCTCTGGCCCATTAAGCATCTTGGTCCT +
Preference number: 3 (lower is better)
Translates to: LRAVVVGERVPH*LHLWPIKHLGP
Trigger: AGGACCAAGATGCTTAATGGGCCAGAGATGCAGCCAGTGGGGAACCCTTTCCCCCACGACCACTGCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CAA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCCTTGCTGGGAGACCTaGCCACTCAGGAGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKPCWET*PLRRLY
Trigger: ATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp ACATGGCTGTATTCTGCGCATATCCAACCTGGGCACTaGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAG +
Preference number: 3 (lower is better)
Translates to: TWLYSAHIQPGH*PLRWLLPGTRE
Trigger: CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR GCA 72 bp TGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTaGCACTCAGGAGGCTTTATTGCGCTAGGATCACCA +
Preference number: 3 (lower is better)
Translates to: CRRTPLPLAGRP*HSGGFIALGSP
Trigger: TGGTGATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CAA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGGAGCAGGAGGTGAACTaGATGTCACCTATCAGCCCC +
Preference number: 3 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGEQEVN*MSPISP
Trigger: GGGGCTGATAGGTGACATCAAGTTCACCTCCTGCTC...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CAA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGACTGCCACTGCCCTCTaGGGGCAGCAGATGCTAGGA +
Preference number: 3 (lower is better)
Translates to: RRMLNSVNSLPDGSREGETATAL*GQQMLG
Trigger: TCCTAGCATCTGCTGCCCCAAGAGGGCAGTGGCAGT...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR-3UTR CAA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGTGTCTGGTAGAGATGTaGAGAGAGGAGCCCATGCCT +
Preference number: 3 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGCLVEM*REEPMP
Trigger: AGGCATGGGCTCCTCTCTCAACATCTCTACCAGACA...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR TCA 72 bp GCAGACATTTTCACCAGGTACCTTACCCAAAACAAGTaGGGTGATCTCAGAGGCTTGCTCCCTAGTGGACTG +
Preference number: 3 (lower is better)
Translates to: ADIFTRYLTQNK*GDLRGLLPSGL
Trigger: CAGTCCACTAGGGAGCAAGCCTCTGAGATCACCTCACTTGTTTTGGGTAAGGTACCTGGTGAAAATGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp AACGCTGGCTGGGAGGGTGTGGGAAACAAGCAGCTATaGAGAAGTGGACGAGAAGCAATCTATACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: NAGWEGVGNKQL*RSGREAIYTEE
Trigger: TTCTTCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCCTCCCAGCCAGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CCA 72 bp CTGGGAGGGTGTGGGAAACAAGCAGCTATGGAGAAGTaGACGAGAAGCAATCTATACAGAAGAAACATTGGC +
Preference number: 3 (lower is better)
Translates to: LGGCGKQAAMEK*TRSNLYRRNIG
Trigger: GCCAATGTTTCTTCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCCCGGAGGCCAGGCGCTaGGGTCTGGGCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSPEARR*GLGSLW
Trigger: CCACAGGCTGCCCAGACCCCAGCGCCTGGCCTCCGG...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGGGGAGTCTGGTGGGTaGTGCCCTGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRGESGG*CPVAAG
Trigger: GCCAGCAGCCACAGGGCACCACCCACCAGACTCCCC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTCGATCTCCTGGGTGTaGGGGACCTCGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRSISWV*GTSGLL
Trigger: CAGCAGCCCCGAGGTCCCCCACACCCAGGAGATCGA...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTGCGGAGCTGGCAGCTaGAGCGGCCAGGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWCGAGS*SGQVLE
Trigger: CTCCAGCACCTGGCCGCTGCAGCTGCCAGCTCCGCA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCAGGCCGGCCCTACTGTaGCCTGGCCCTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSRPALL*PGPLSS
Trigger: TGAGGACAGAGGGCCAGGCCACAGTAGGGCCGGCCT...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCTGGCCTGCTCATGGTaGCCTCAGGCCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWLACSW*PQASPC
Trigger: GCATGGGGAGGCCTGAGGTCACCATGAGCAGGCCAG...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp GTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTaGGCGCTGTGGCCTACCGCTACTGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGASGIAPSLLG*ALWPTATATAL
Trigger: GAGGGCAGTGGCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCCAGGTGGCCCCCAGTaGCAGGGCGGTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSPGGPQ*QGGGHC
Trigger: ACAGTGCCCACCGCCCTGTCACTGGGGGCCACCTGG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGGCTGGTGCCCACGCTaGCCACATAACTACTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRGWCPR*PHNYSP
Trigger: AGGAGAGTAGTTATGTGGGCAGCGTGGGCACCAGCC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGGACCTGCAGGGTTCTaGTTACCACAGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRGPAGF*LPQAPP
Trigger: AGGTGGTGCCTGTGGTAAGCAGAACCCTGCAGGTCC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCGGCTCTGCAGAGCCATaGGATAGCCAGCTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSGSAEP*DSQLGE
Trigger: TTCCCCGAGCTGGCTATCCCATGGCTCTGCAGAGCC...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGGTCTGGGCAGCCTGTaGCCGTCCCCCTCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQGLGSL*PSPSAD
Trigger: ATCTGCCGAGGGGGACGGCCACAGGCTGCCCAGACC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCCACGGGACTCCAGACTaGTGGAGCGGATGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSHGTPD*WSGCVG
Trigger: TCCAACGCATCCGCTCCACCAGTCTGGAGTCCCGTG...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp AGCCTGGGGGCAAGGGCTCCCAAGGCTGCCACCCGGTaGAGCCAGCCACTGACAGCCAGACATGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: SLGARAPKAATR*SQPLTARHGCI
Trigger: AATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCAGCCTTGGGAGCCCTTGCCCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCGGCATGGTGCTAACCTaGCGGCTGGTGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCGMVLT*RLVARG
Trigger: GCCTCTGGCCACCAGCCGGCAGGTTAGCACCATGCC...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGCTTGGCCCACGGGGCTaGCAGCTAGGGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQLGPRG*QLGLWL
Trigger: AAGCCACAGCCCTAGCTGCCAGCCCCGTGGGCCAAG...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATTGGCAGCGGTGGCGGTaGCAGCGGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHWQRWR*QRLLLL
Trigger: CAGCAGCAGCAACCGCTGCCACCGCCACCGCTGCCA...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCGGGGCCTTCAGAGGCTaGGTGGGCTCCATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSGAFRG*VGSIQG
Trigger: ACCCTGGATGGAGCCCACTCAGCCTCTGAAGGCCCC...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGGTGTGGGTAGACATCTaGGGTCAGCGAGACCGTGTC +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWVWVDI*GQRDRV
Trigger: GACACGGTCTCGCTGACCTCAGATGTCTACCCACAC...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTGGAAGCTGCCTGTaGTGGCTGCCAGCATATGAG +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWPGSCL*WLPAYE
Trigger: CTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGG...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGCCTCAGAGCGCACGATaGACACCAGCCGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREPQSAR*TPAARR
Trigger: CCTTCGTGCGGCTGGTGTTCATCGTGCGCTCTGAGG...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCACCACAGGCCTCTCACTaGCAGCCACGAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPPQASH*QPRSQS
Trigger: GCTTTGGCTTCGTGGCTGGCAGTGAGAGGCCTGTGG...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGGATAAGCTCTCCAGCTaGCCTTTGTCCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWDKLSS*PLSPWP
Trigger: TGGCCAGGGGGACAAAGGGCAGCTGGAGAGCTTATC...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCGCTGCACAGGGCTACTaGGGAGCTGGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSAAQGY*GAGSCS
Trigger: GCTGCAGCTGCCAGCTCCGCAGTAGCCCTGTGCAGC...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCTGCTGTTGCAGCTaGTGCTGCTGGTTAAGGTTC +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRCCCCS*CCWLRF
Trigger: GAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCA...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGAGTCTGGTGGGTGGTaGCCTGTGGCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIESGGW*PVAAGS
Trigger: GCTGCCAGCAGCCACAGGGCACCACCCACCAGACTC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGGGGGTGGGGCGGCAATaGCAGGCAACAGAGACGTTG +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREGVGRQ*QATETL
Trigger: CAACGTCTCTGTTGCCTGCCATTGCCGCCCCACCCC...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGTGGATGCTCGGGGGCTaGCAGAGACCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGWMLGG*QRPRGP
Trigger: TGGGCCCCGAGGTCTCTGCCAGCCCCCGAGCATCCA...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGTTTTCCCTAAGCTCTaGGACCTGCTCTTCACTGAG +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRVFPKL*DLLFTE
Trigger: CTCAGTGAAGAGCAGGTCTCAGAGCTTAGGGAAAAC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGATAAGTTGCGTAGTCTaGAAGGCCCTCGGGATGACT +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRISCVV*KALGMT
Trigger: AGTCATCCCGAGGGCCTTTCAGACTACGCAACTTAT...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGGGTTGTCAGCCCTGCTaGCCGTGGATGCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGGCQPC*PWMLGG
Trigger: GCCCCCGAGCATCCACGGGCAGCAGGGCTGACAACC...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGATGCCAGGTCCCTGCTaGACAGGGCTACTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKMPGPC*TGLLRS
Trigger: GCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCAT...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGACATGCCAGGTCCCTaGTGCACAGGGCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKDMPGP*CTGLLR
Trigger: CCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGTC...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGGGGGACCTCGGGGCTaGTGCTGCAAGTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGGGPRG*CCKWQH
Trigger: ATGCTGCCACTTGCAGCAGCAGCCCCGAGGTCCCCC...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
61% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCTCGGAAACCAGGGGGTaGGGCGGCAATGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARISETRG*GGNGRQ
Trigger: TTGCCTGCCATTGCCGCCCCACCCCCTGGTTTCCGA...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGCCAGTGACAGCTGGCTaGGGGGATGGGTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREPVTAG*GDGLGS
Trigger: AGATCCCAACCCATCCCCCCAGCCAGCTGTCACTGG...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGGCCCTACTGTGGCCTaGCCCTCTGTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIGPTVA*PSVLRN
Trigger: GTTCCTGAGGACAGAGGGCCAGGCCACAGTAGGGCC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGCTGAGAATTCCGTGTaGTCTCTGGAGCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQAENSV*SLEHPG
Trigger: GCCCGGGTGCTCCAGAGACCACACGGAATTCTCAGC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCCATCTTTGCCATCGCTaGCATCATCTGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSHLCHR*HHLPCR
Trigger: GCGACATGGCAGATGATGCCAGCGATGGCAAAGATG...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCCACGAGCCTCAGGGCTaGCCACACACTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIHEPQG*PHTAAR
Trigger: TCTTGCGGCAGTGTGTGGCCAGCCCTGAGGCTCGTG...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGGACTCTTGTCCACATTaGCTACCCGGCGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREDSCPH*LPGGRR
Trigger: CCTCCTGCCGCCGGGTAGCCAATGTGGACAAGAGTC...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCATGCAGCTGCTGCTGCTaGTTAAGGTTCCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPCSCCC*LRFRAV
Trigger: CACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCA...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCATCAGGACGTTGGGGATaGGGAGGAGAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPSGRWG*GGELPS
Trigger: AGAAGGAAGCTCTCCTCCTCATCCCCAACGTCCTGA...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGCCCGAGTCCAGCGATaGCTCAGGAGTGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGERARVQR*LRSDCG
Trigger: GCCACAATCACTCCTGAGTCATCGCTGGACTCGGGC...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGGAGGCTGTCCTTGTTaGGGTGCTGGGCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIGGCPC*GAGPGS
Trigger: ACTTCCTGGCCCAGCACCTCAACAAGGACAGCCTCC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGGCGGTGAGGACAGCCTaGGCGGCACAGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGAVRTA*AAQLWI
Trigger: GATCCAGAGCTGTGCCGCTCAGGCTGTCCTCACCGC...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCGGGCCCAGCTGCTGCTaGGAATTCCGTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSGPSCC*EFRVVS
Trigger: AGAGACCACACGGAATTCTCAGCAGCAGCTGGGCCC...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGCACGAAGGTCTCAATaGGGCTGCTCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQARRSQ*GCSAPG
Trigger: TCCAGGTGCTGAGCAGCCTCATTGAGACCTTCGTGC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGGACCTCGGGGCTGCTaGTGCAAGTGGCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGGPRGC*CKWQHP
Trigger: TGGATGCTGCCACTTGCAGCAGCAGCCCCGAGGTCC...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCATGCTGTTGCAGCTGCTaGTGCTGGTTAAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPCCCSC*CWLRFR
Trigger: CCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCA...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGGGCAGCGGTTGCTGCTaGTGCTGCTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREGSGCC*CCCCCC
Trigger: ACAGCAACAACAGCAGCAGCAGCAGCAACCGCTGCC...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGGTCCCACCAGCAGAGTaGTGGCTGAGTGCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREVPPAE*WLSASR
Trigger: ACGAGAAGCACTCAGCCACCACTCTGCTGGTGGGAC...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGAGGACCTGGCCCTGCTaGCACAAGGCTCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQRTWPC*HKAHGL
Trigger: TAGACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCT...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCTGCTCGCTAAGCTGTaGGGACAGCGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKLLAKL*GQRWVY
Trigger: GTACACCCAGCGCTGTCCCCACAGCTTAGCGAGCAG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCATCACGCTCACCTCTaGCCTGCTCATGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCHHAHL*PAHGDL
Trigger: GAGGTCACCATGAGCAGGCCAGAGGTGAGCGTGATG...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATTCCGGTGGGGAAAGGTaGAGGTTGTCAGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHSGGER*RLSALL
Trigger: CAGCAGGGCTGACAACCTCCACCTTTCCCCACCGGA...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATAGGTTTAGCACCCTCTaGCCCACCCTTGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHRFSTL*PTLACH
Trigger: GTGGCAGGCAAGGGTGGGCCAGAGGGTGCTAAACCT...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGCCCTCGGGATGACTTaGGCTTTGTGGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHALGMT*ALWGLQ
Trigger: CTGAAGGCCCCACAAAGCCCAAGTCATCCCGAGGGC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGCGAAGGTCGATCTCCTaGGTGTGGGGGACCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGRRSIS*VWGTSG
Trigger: CCCCGAGGTCCCCCACACCCAGGAGATCGACCTTCG...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGGGAGGCCATATGCATaGGCCCGCAGGGCATTGATC +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHGRPYA*ARRALI
Trigger: GATCAATGCCCTGCGGGCCCATGCATATGGCCTCCC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp CTGTATTCTGCGCATATCCAACCTGGGCACTGGCCCTaGAGGTGGCTCCTGCCAGGTACAAGGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: LYSAHIQPGHWP*RWLLPGTREPM
Trigger: CATGGGCTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATGCGCAGAATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCTATATAGGGTCTCGGTaGATGGTCACTTGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSYIGSR*MVTCRS
Trigger: ACTGCGACAAGTGACCATTCACCGAGACCCTATATA...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCACAGCTCTGGATCCTaGAAGGCAGGTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKHSSGS*KAGPFG
Trigger: CCCGAAAGGACCTGCCTTTCAGGATCCAGAGCTGTG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCAGACCTGCTCTTCACTaGGGGATGGTGTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSRPALH*GMVWLT
Trigger: GGTCAGCCACACCATCCCTCAGTGAAGAGCAGGTCT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTTTCGAGGCCCCATCTaGTCCTGGAGTTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWFRGPI*SWSLTL
Trigger: CAAAGTCAAACTCCAGGAGCAGATGGGGCCTCGAAA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCACTGCCATGTCGCACTTaGGGTAGTAGAAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPLPCRT*GSRSSS
Trigger: GCTACTGCTTCTACTACCGCAAGTGCGACATGGCAG...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCATCAGGGAGGCCATATaGATGGGCCCGCAGGGCATT +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIIREAI*MGPQGI
Trigger: AATGCCCTGCGGGCCCATGCATATGGCCTCCCTGAT...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGGTGGCAGCGGTTGCTaGTGCTGCTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGGGSGC*CCCCCC
Trigger: GCAACAACAGCAGCAGCAGCAGCAACCGCTGCCACC...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGACTCGGGCCACTCCTTaGTTCTCCCGGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGTRATP*FSRNSW
Trigger: CCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGT...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCTGGCACAAGGCTCATaGTCTAGGCTGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKLAQGS*SRLAAS
Trigger: TGACGCAGCCAGCCTAGACCATGAGCCTTGTGCCAG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTACTGCCAAGGAGTATaGTCTGTCTCCCTGTACCTG +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWYCQGV*SVSLYL
Trigger: CAGGTACAGGGAGACAGACCATACTCCTTGGCAGTA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCTCGGGGAACCAAGCTaGTCTCTTCAAGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCLGEPS*SLQACC
Trigger: GCAGCAAGCTTGAAGAGACCAGCTTGGTTCCCCGAG...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGCTCTGGCCTCTGGATTaGCTGCTGGGGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRLWPLD*LLGLGP
Trigger: TGGGCCAAGCCCCAGCAGCCAATCCAGAGGCCAGAG...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGCCCCTGAGGCACACGTaGTCAGGCACGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRPLRHT*SGTKPH
Trigger: GTGGGGTTTCGTGCCTGACCACGTGTGCCTCAGGGG...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTCAGTTTCCTGTAGTTaGGATCTCCCAAACACTCAC +
Preference number: 4 (lower is better)
Translates to: CPLGAADARRSSRSWLPRSVSCS*DLPNTH
Trigger: GTGAGTGTTTGGGAGATCCCAACTACAGGAAACTGA...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGGTGGTGCCCTGTaGCTGCTGGCAGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAVGGAL*LLAAVA
Trigger: CGCCACCGCTGCCAGCAGCCACAGGGCACCACCCAC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTGGGCACTGTGCATGTaGTCTGCCTTTATCATTGGA +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWWALCM*SAFIIG
Trigger: TCCAATGATAAAGGCAGATCACATGCACAGTGCCCA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGTCCAGCTCCTGGGCGTaGTCTCGTACTGTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGSSSWA*SRTVRV
Trigger: GACTCGGACAGTACGAGATCACGCCCAGGAGCTGGA...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGTATAGGACCTGGCCCTaGTGGCACAAGGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGERYRTWP*WHKAHG
Trigger: ACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCTATA...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGTTGAAGATACTCTGTaGCTGGAAGTTCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQVEDTL*LEVPPG
Trigger: GCCAGGGGGAACTTCCAGGCACAGAGTATCTTCAAC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCTCGGCAGATACGCTTaGAGTCACAGCTGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSLGRYA*SHSCVS
Trigger: AGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCATCGCTGGCATCATCTaGCATGTCGCACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCIAGII*HVALAV
Trigger: TACCGCAAGTGCGACATGGCAGATGATGCCAGCGAT...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGTGGTGCCCTGTGGCTaGTGGCAGCGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRVVPCG*WQRWRW
Trigger: CCACCGCCACCGCTGCCAGCAGCCACAGGGCACCAC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGCTCAGAGGGGCCTCCTaGCCTCACAGATCGAACCAC +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGLRGAS*PHRSNH
Trigger: GTGGTTCGATCTGTGAGGCCAGGAGGCCCCTCTGAG...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTTAATAGCCACAATCTaGTCACCAGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: WWVGASGIAPSLLGLALWLIATI*SPARSL
Trigger: CAAGCTCCTGGCTGGTGACCAGATTGTGGCTATTAA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGGACCTTCACGGGATTaGACCTCAGCTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHGPSRD*TSAWPS
Trigger: AGAAGGCCAAGCTGAGGTCCAATCCCGTGAAGGTCC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCAGCTCCACTGGGTCCTTaGGAAAGAAGCTTATTCGGA +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPAPLGP*ERSLFG
Trigger: TCCGAATAAGCTTCTTTCCCAAGGACCCAGTGGAGC...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCCAAAGTATAGGACCTaGCCCTGCTGGCACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKPKYRT*PCWHKA
Trigger: AGCCTTGTGCCAGCAGGGCCAGGTCCTATACTTTGG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGGCCCCATCTGCTCCTaGAGTTTGACTTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQGPICS*SLTLQE
Trigger: CTCTTGCAAAGTCAAACTCCAGGAGCAGATGGGGCC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCGGGCAGCTGAGATTATaGCTGGGGTCACGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSGQLRL*LGSRCL
Trigger: AAGGCAACGTGACCCCAGCCATAATCTCAGCTGCCC...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGAAGGTTCTTCTCTTTaGTGCCCTGCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGEREGSSL*CPAEGR
Trigger: CCTCCCTTCTGCAGGGCATCAAAGAGAAGAACCTTC...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCACCTGGACTTCTGACTaGGGTATCTTTCTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSTWTSD*GIFLRA
Trigger: CGCTCGGAGAAAGATACCTCAGTCAGAAGTCCAGGT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCAGCACAAGAGCAAAGTaGTCAATGGACCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCSTRAK*SMDLRE
Trigger: CTCCCTGAGGTCCATTGAGCACTTTGCTCTTGTGCT...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGACCTCCCCAGTAGCTTaGTTTCCCATGGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKTSPVA*FPMESR
Trigger: TCGAGACTCCATGGGAAAGCAAGCTACTGGGGAGGT...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGGAAAACACAGCCATTTaGCTGGGGCCTTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREENTAI*LGPLLS
Trigger: TGAGAGCAAAGGCCCCAGGCAAATGGCTGTGTTTTC...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGACCACAGGCACCACCTaGTCATCCAACTTCATGCCA +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKTTGTT*SSNFMP
Trigger: TGGCATGAAGTTGGATGAGCAGGTGGTGCCTGTGGT...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGAGCAAAGTGCTCAATaGACCTCAGGGAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARIEQSAQ*TSGRVG
Trigger: ACCGACTCTCCCTGAGGTCCATTGAGCACTTTGCTC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCTTCTCCCGGAACAGCTaGATCTTGCTGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCFSRNS*ILLILL
Trigger: CAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAA...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGCTCATGGTCTAGGCTaGCTGCGTCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGAHGLG*LRQSHR
Trigger: CCGATGACTTTGACGCAGCCAGCCTAGACCATGAGC...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGACCAGGCGCTGGGGTCTaGGCAGCCTGTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERPGAGV*AACGRP
Trigger: GGGACGGCCACAGGCTGCCCAGACCCCAGCGCCTGG...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp GCAGCCCTTAATAGAGCCCAGTCTAGGGAGTTAGCCTaGGAGACTGATAGGCTCTTGGACCCTGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: AALNRAQSRELA*ETDRLLDPDWP
Trigger: GGGCCAGTCAGGGTCCAAGAGCCTATCAGTCTCCAAGGCTAACTCCCTAGACTGGGCTCTATTAAGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCACTAGGCCGAGTGGCTaGGACAGTGATATAGATGTG +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSTRPSG*DSDIDV
Trigger: CACATCTATATCACTGTCTCAGCCACTCGGCCTAGT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGCGATGACTCAGGAGTaGTTGTGGCCAGCACAATCA +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGAMTQE*LWPAQS
Trigger: TGATTGTGCTGGCCACAATCACTCCTGAGTCATCGC...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGTTAGGAGGGAAGCTTTaGACAGGAAACCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGERLGGKL*TGNLSS
Trigger: GGAGGACAGGTTTCCTGTTCAAAGCTTCCCTCCTAA...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCTACCTCCTCTGGCAGTaGAAACACAGCCATTTGCCT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSYLLWQ*KHSHLP
Trigger: AGGCAAATGGCTGTGTTTTCACTGCCAGAGGAGGTA...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATAAGGTACTGGAGCTTTaGTTGAATGGCGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHKVLEL*LNGGAL
Trigger: AAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTT...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGTGGTGTTTTGGTGCTaGTTCATGGCCGACATCATC +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHVVFWC*FMADII
Trigger: GATGATGTCGGCCATGAAGCAGCACCAAAACACCAC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCAGGCTTAGATTCTTCTaGTCGCTAAGCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSRLRFF*SLSCGD
Trigger: GTCCCCACAGCTTAGCGAGCAGAAGAATCTAAGCCT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCTAAGCTCTGAGACCTaGTCTTCACTGAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSLSSET*SSLRDG
Trigger: ACCATCCCTCAGTGAAGAGCAGGTCTCAGAGCTTAG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGTTACTGTGTACCACCTaGTGCAGGGCAGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGERLLCTT*CRAAEI
Trigger: AATCTCAGCTGCCCTGCAGCAGGTGGTACACAGTAA...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGTACTGCTTTACCTTCTaGAGCTGGGCTTGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKYCFTF*SWACRS
Trigger: TGAGCGACAAGCCCAGCTGCAGAAGGTAAAGCAGTA...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATAGGAGAGCTCATCTTTaGCATCGCTGGCATCATCTG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHRRAHL*HRWHHL
Trigger: CAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCT...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCCCTCGGGGCTGCTGCTaGAAGTGGCAGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAPRGCC*KWQHPG
Trigger: TCCTGGATGCTGCCACTTGCAGCAGCAGCCCCGAGG...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGTGTTGCAGCTGCTGCTaGTGGTTAAGGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRCCSCC*WLRFRA
Trigger: AGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACA...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGGCAGGCAAAGTTGGTaGCTTCAGGCCACTCCATCA +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRGRQSW*LQATPS
Trigger: TGATGGAGTGGCCTGAAGCCACCAACTTTGCCTGCC...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGAGAAGACCATTTTCCTaGAATCCAGCAGAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQRRPFS*NPAEVG
Trigger: GCCGACTTCTGCTGGATTCCAGGAAAATGGTCTTCT...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGTCGGGGCAGGACTCTaGCCAGTGACAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRVGAGL*PVTAGW
Trigger: CCAGCCAGCTGTCACTGGCCAGAGTCCTGCCCCGAC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGGCCTCAGGGGGCTCTaGCTTCTAGGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAGLRGL*LLGWQL
Trigger: CAGCTGCCAACCTAGAAGCCAGAGCCCCCTGAGGCC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCAAGAAGCAGTAGCGAATaGAACAGCACTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPRSSSE*NSTCCF
Trigger: AAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCT...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp GCTCCCCCGGTGCCCAACTCAGAGCAGGAGGTGAACTaGATGTCACCTATCAGCCCCAGAGAAGAGATAGAT +
Preference number: 4 (lower is better)
Translates to: APPVPNSEQEVN*MSPISPREEID
Trigger: ATCTATCTCTTCTCTGGGGCTGATAGGTGACATCAAGTTCACCTCCTGCTCTGAGTTGGGCACCGGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGTTGAGTGTGATCTTCTaGCTAGGCCGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGLSVIF*LGRVAE
Trigger: CTCAGCCACTCGGCCTAGTCAGAAGATCACACTCAA...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGAGGCTTGGCATCCATaGTGCTGGTCTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAEAWHP*CWSPLG
Trigger: CCCGAGTGGAGACCAGCATCATGGATGCCAAGCCTC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGTCTGCTCCTGGAGTTTaGCTTTGCAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKSAPGV*LCKSHS
Trigger: ACTGTGACTCTTGCAAAGTCAAACTCCAGGAGCAGA...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGTGGGGTCCATCCTCTaGAGCAGCCAGCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRVGSIL*SSQRFQ
Trigger: CTGGAAGCGCTGGCTGCTTCAGAGGATGGACCCCAC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGCATATCTGTGAGCTCTaGAGAGTTGGTTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GEEEDHANTLRAVVVGERHICEL*RVGFMA
Trigger: GGCCATGAAACCAACTCTTCAGAGCTCACAGATATG...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp ACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGCAGCTTGGCCTTCTTTaGAGCACTGATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TTRCKDHKAQTWGRGWGGQLGLL*STDEGR
Trigger: TCTGCCTTCATCAGTGCTGCAAAGAAGGCCAAGCTG...CCCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGTGGAACAGCACTTGCTaGTTTCGCTATCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LASVEGHPSPLLGDLATQWNSTC*FRYLHP
Trigger: TGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCA...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGCTCATCCAACTTCATaGCAGGCAGAATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHAHPTS*QAESSW
Trigger: CCATGAAGATTCTGCCTGGCATGAAGTTGGATGAGC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGAAGAGTTGGTTTCATaGCCCGAGTCCAGCGATGAC +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGREELVS*PESSDD
Trigger: GTCATCGCTGGACTCGGGCCATGAAACCAACTCTTC...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGTCTGTCTCTTTCTTCTaGCGGGTAGGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGSVSFF*RVGKVA
Trigger: TGCCACCTTCCCTACCCGCCAGAAGAAAGAGACAGA...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
3UTR CAA 72 bp GCAGGGTCTGAGTGGCGAAGGTGTAGGATCAAGAAGTaGGGAGAAGAGGAAGACCATGCCAACACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGSEWRRCRIKK*GEEEDHANTLR
Trigger: CCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCCAACTTCTTGATCCTACACCTTCGCCACTCAGACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCAGAATCAGGAACTTGTaGTTCTGTTCTGGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSRIRNL*FCSGPV
Trigger: TACTGGGCCAGAACAGAATCACAAGTTCCTGATTCT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGACAAACACTCACCCCCTaGGGCACACGTGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRQTLTP*GTRGQA
Trigger: TGCCTGACCACGTGTGCCTCAGGGGGTGAGTGTTTG...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGATGGCTGCCAGCATATaGGTTGGACTCTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGMAASI*VGLLST
Trigger: TGTGGACAAGAGTCCAACTCATATGCTGGCAGCCAT...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGGCTCATAACAGTCGATaGCGGGGAGTCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RRMLNSVNSLPDGSREGEAHNSR*RGVWWV
Trigger: CACCCACCAGACTCCCCGTCATCGACTGTTATGAGC...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGGGCTGGCCACACACTaGCGCAAGACTGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRGLATH*RKTVSS
Trigger: GCTGCTAACAGTCTTGCGGCAGTGTGTGGCCAGCCC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGCAAGCTTGCTGCTTTTaGATAAGCTCTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRQACCF*ISSPAA
Trigger: GGCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTG...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGTTTACCTTCTGCAGCTaGGCTTGTCGCTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRFTFCS*ACRSSV
Trigger: GACAGATGAGCGACAAGCCCAGCTGCAGAAGGTAAA...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCTCTCTGACATATCTGTaGGCTCTGAAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PPPCWETLPLRRLYCARISLTYL*ALKSWF
Trigger: AAACCAACTCTTCAGAGCTCACAGATATGTCAGAGA...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGCAGTTCATTCAAAATaGGAAGGTACTGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHAVHSK*EGTGAL
Trigger: CAAAGCTCCAGTACCTTCGCATTTTGAATGAACTGC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCAGCGCTTCCAGAGCCTaGAGAGTAGACACAAGAGCG +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGASASRA*RVDTRA
Trigger: CGCTCTTGTGTCTACTCTGCAGGCTCTGGAAGCGCT...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGGCTTGCAGTCACAGCTaGGTCTCTGTTCGCGAGACA +
Preference number: 4 (lower is better)
Translates to: RRMLNSVNSLPDGSREGEACSHS*VSVRET
Trigger: TGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGC...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGATGCAGTCTGTGGGGGTaGTGGGTGGGGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERCSLWG*WVGSIL
Trigger: GAGGATGGACCCCACCCACCACCCCCACAGACTGCA...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGACTGTGGCTTCGGGGCTaGCAGCTTGGGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERLWLRG*QLGLCR
Trigger: TCTGCAGAGCCCAAGCTGCCAGCCCCGAAGCCACAG...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAACACAGCCATTTGCCTaGGGCCTTTGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRTQPFA*GLCSQG
Trigger: CCCCTGAGAGCAAAGGCCCCAGGCAAATGGCTGTGT...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGAGATTAGGTTCTCGTTaGCATCCGTCCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRRLGSR*HPSCFL
Trigger: AAGAAAGCAGGACGGATGTCAACGAGAACCTAATCT...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCAATCTTCATGGGGATTaGATAGGAGAGCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSNLHGD*IGELIF
Trigger: AAAGATGAGCTCTCCTATTCAATCCCCATGAAGATT...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATCAGCACAATCAGACCTaGAGTCTGTGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PISPREEIDKIQLCGGRNQHNQT*SLWGWW
Trigger: CCACCACCCCCACAGACTGCAGGTCTGATTGTGCTG...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGACAGCGCTGGGTGTACTaGCAAGGAGTATGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRQRWVY*QGVWSV
Trigger: GACAGACCATACTCCTTGGCAGTACACCCAGCGCTG...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGGGCCAGGAAGTAGGTaGTGTTTTGGTGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAGPGSR*CFGAAS
Trigger: TGAAGCAGCACCAAAACACCACCTACTTCCTGGCCC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGACTTCAGATTCTTGCTaGCACTGCTGCTCATCACGC +
Preference number: 4 (lower is better)
Translates to: RRMLNSVNSLPDGSREGETSDSC*HCCSSR
Trigger: GCGTGATGAGCAGCAGTGTCAGCAAGAATCTGAAGT...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGTCTCTTCAAGCTTGCTaGTTTTGGATAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRSLQAC*FWISSP
Trigger: TGGAGAGCTTATCCAAAAGCAGCAAGCTTGAAGAGA...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGATTTGCCTGGGGCCTTTaGTCTCAGGGGCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERFAWGL*SQGPLG
Trigger: TCCAAGTGGCCCCTGAGAGCAAAGGCCCCAGGCAAA...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCATGTGGGGTCAGATTTaGTCCGGGGTCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAMWGQI*SGVWFL
Trigger: AAGAAACCAGACCCCGGACCAAATCTGACCCCACAT...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCCTTGGCCAGAGCTTTTaGATGTGGGGTCAGATTTGG +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGALGQSF*MWGQIW
Trigger: CCAAATCTGACCCCACATCCAAAAGCTCTGGCCAAG...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATCCTTCAGAGGCTGAGTaGGCTCCATCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PISPREEIDKIQLCGGRNPSEAE*APSRVV
Trigger: AACAACCCTGGATGGAGCCCACTCAGCCTCTGAAGG...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGACCTGGAAGTTCCCCCTaGCTTGGTGGCTTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRPGSSP*LGGFRS
Trigger: ACTTCTAAAGCCACCAAGCCAGGGGGAACTTCCAGG...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATGAGACCGTGTCACCCTaGTCCAGCTCACTGATACTG +
Preference number: 4 (lower is better)
Translates to: PISPREEIDKIQLCGGRNETVSP*SSSLIL
Trigger: CAGTATCAGTGAGCTGGACCAGGGTGACACGGTCTC...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGACTACCTCTTCCACTTTaGCCAGCAGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERLPLPL*PAAPGA
Trigger: AGCGCCAGGAGCTGCTGGCCAAAGTGGAAGAGGTAG...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGACCTGGTCCAGCTCACTaGTACTGTAGTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERPGPAH*YCSGAS
Trigger: TGATGCGCCACTACAGTATCAGTGAGCTGGACCAGG...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGTGAATGACTTGATCTaGCCATTTTCTAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRVNDLI*PFSRKT
Trigger: GGTTTTCCTAGAAAATGGGCAGATCAAGTCATTCAC...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGATCTGCCTTTATCATTaGAGGTGGAAGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RRMLNSVNSLPDGSREGEICLYH*RWKRLA
Trigger: AGCCAGCCTCTTCCACCTCCAATGATAAAGGCAGAT...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCTTTGGTGCTGCTTCATaGCCGACATCATCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAFGAAS*PTSSLT
Trigger: TGTCAGAGATGATGTCGGCCATGAAGCAGCACCAAA...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCTGCCAGCATATGAGTTaGACTCTTGTCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGACQHMS*TLVHIG
Trigger: GCCAATGTGGACAAGAGTCCAACTCATATGCTGGCA...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGACTTTGAACAGCTCTaGGCTTGGGATCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGADFEQL*AWDHLH
Trigger: ATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCCTTGTGATTCTGTTCTaGCCCAGTATACTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGALVILF*PSILKH
Trigger: GTGCTTGAGTATACTGGGCCAGAACAGAATCACAAG...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATCTTTATCATTGGAGGTaGAAGAGGCTGGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PISPREEIDKIQLCGGRNLYHWR*KRLASR
Trigger: CCTGCTAGCCAGCCTCTTCCACCTCCAATGATAAAG...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGAATGACTTGGGCTTTGTaGGGCCTTCAGAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERMTWAL*GLQRLS
Trigger: ACTCAGCCTCTGAAGGCCCCACAAAGCCCAAGTCAT...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGTCTGTACACTGTCAATaGGTGTTACCGGAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RRMLNSVNSLPDGSREGESVHCQ*VLPESH
Trigger: ATGAGATTCCGGTAACACTCATTGACAGTGTACAGA...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CCA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGCCCAAAAGCATCTCTaGCTTAGGTTCCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRAQKHL*LRFHSK
Trigger: TTTGGAATGGAACCTAAGCCAGAGATGCTTTTGGGC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR GCA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATGAATGGAACAGCACTTaGTGCTTTCGCTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PISPREEIDKIQLCGGRNEWNST*CFRYLH
Trigger: ATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTC...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR TCA 90 bp CACATAAGAACGAGAGATTTCACACAGGCCTCTCACACAGTGATGAAAGAGAGAGCCATCAAATGTGAATaGCTTGATCTGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: HIRTRDFTQASHTVMKERAIKCE*LDLPIF
Trigger: GAAAATGGGCAGATCAAGTCATTCACATTTGATGGC...TCTCTCTTTCATCACTGTGTGAGAGGCCTGTGTGAAATCTCTCGTTCTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GGAGTCTGGTGGGTGGTGCCCTGTGGCTGCTGGCAGCGGTGGCGGTaGCAGCGGTTGCTGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GVWWVVPCGCWQRWR*QRLLLLLLLLLLLL
Trigger: CAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACCGCTGCCACCGCCACCGCTGCCAGCAGCCACAGGGCACCACCCACCAGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCGCCAGGAGGCTGTCCTaGTTGAGGTGCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSARRLS*LRCWAR
Trigger: CCTGGCCCAGCACCTCAACAAGGACAGCCTCCTGGC...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGGCTCTGGCCTCTGGATaGGCTGCTGGGGCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWALASG*AAGAWP
Trigger: GGGCCAAGCCCCAGCAGCCAATCCAGAGGCCAGAGC...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGGACTCTTGTCCACATaGGCTACCCGGCGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CPLGAADARRSSRSWLPRGLLST*ATRRQE
Trigger: CTCCTGCCGCCGGGTAGCCAATGTGGACAAGAGTCC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CAGCCTGTGGCCGTCCCCCTCGGCAGATACGCTTGCAGTCACAGCTaGGTCTCTGTTCGCGAGACATGCCAGGTCCCTGCTGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: QPVAVPLGRYACSHS*VSVRETCQVPAAQG
Trigger: GCCCTGTGCAGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGCCACAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CTGGGGTCTGGGCAGCCTGTGGCCGTCCCCCTCGGCAGATACGCTTaGAGTCACAGCTGCGTCTCTGTTCGCGAGACATGCCAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LGSGQPVAVPLGRYA*SHSCVSVRETCQVP
Trigger: AGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGCCACAGGCTGCCCAGACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGGCTCTCAGGGGCCACTaGGACGTAGGAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWALRGH*DVGGLS
Trigger: GGAGAGCCCTCCTACGTCCAAGTGGCCCCTGAGAGC...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TTGCAGTCACAGCTGCGTCTCTGTTCGCGAGACATGCCAGGTCCCTaGTGCACAGGGCTACTGCGGAGCTGGCAGCTGCAGCGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LQSQLRLCSRDMPGP*CTGLLRSWQLQRPG
Trigger: ACCTGGCCGCTGCAGCTGCCAGCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCGGGATGACTTGGGCTTaGTGGGGCCTTCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSGMTWA*WGLQRL
Trigger: CAGCCTCTGAAGGCCCCACAAAGCCCAAGTCATCCC...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGGAAGGTACTGGAGCTTaGCTTGAATGGCGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CPLGAADARRSSRSWLPREGTGA*LEWRSP
Trigger: AGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTC...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGACGCAGGTGACGTCCTaGCTCCTGACTTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: CPLGAADARRSSRSWLPRTQVTS*LLTLNS
Trigger: GCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGT...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCAGGCCCTCGGGATGACTaGGGCTTTGTGGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPGPRDD*GFVGPS
Trigger: TGAAGGCCCCACAAAGCCCAAGTCATCCCGAGGGCC...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCTGGGCCCGCAGGGCATaGATCTTAGCCAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCWARRA*ILARLP
Trigger: GGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCA...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp ACATGCCAGGTCCCTGCTGCACAGGGCTACTGCGGAGCTGGCAGCTaGAGCGGCCAGGTGCTGGAGGTTGAAGATACTCTGTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: TCQVPAAQGYCGAGS*SGQVLEVEDTLCLE
Trigger: TTCCAGGCACAGAGTATCTTCAACCTCCAGCACCTGGCCGCTGCAGCTGCCAGCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp ATACCCGAAGGTCGATCTCCTGGGTGTGGGGGACCTCGGGGCTGCTaGTGCAAGTGGCAGCATCCAGGACCTGCAGGGTTCTGCTTACCA +
Preference number: 5 (lower is better)
Translates to: IPEGRSPGCGGPRGC*CKWQHPGPAGFCLP
Trigger: TGGTAAGCAGAACCCTGCAGGTCCTGGATGCTGCCACTTGCAGCAGCAGCCCCGAGGTCCCCCACACCCAGGAGATCGACCTTCGGGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGGATACCCGAAGGTCGATCTCCTGGGTGTGGGGGACCTCGGGGCTaGTGCTGCAAGTGGCAGCATCCAGGACCTGCAGGGTTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: WIPEGRSPGCGGPRG*CCKWQHPGPAGFCL
Trigger: TAAGCAGAACCCTGCAGGTCCTGGATGCTGCCACTTGCAGCAGCAGCCCCGAGGTCCCCCACACCCAGGAGATCGACCTTCGGGTATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTGCTaGTGGTTAAGGTTCCGGGCTGTGGACTCCTCAGCGGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCSCC*WLRFRAVDSSAARS
Trigger: GCTGCGCGCCGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTaGTGCTGGTTAAGGTTCCGGGCTGTGGACTCCTCAGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCSC*CWLRFRAVDSSAAR
Trigger: GCGCGCCGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CAGCTGCCCTTTGTCCCCCTGGCCAGAAACTACGCTCTGCTTGTTTaGGGGAGGTTTAGCACCCTCTGGCCCACCCTTGCCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: QLPFVPLARNYALLV*GRFSTLWPTLACHL
Trigger: GAGGTGGCAGGCAAGGGTGGGCCAGAGGGTGCTAAACCTCCCCCAAACAAGCAGAGCGTAGTTTCTGGCCAGGGGGACAAAGGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GTGTCCAGACGGGCAGCCAGGAAGCCATCAGGGAGGCCATATGCATaGGCCCGCAGGGCATTGATCTTAGCCAGGCTCCCCTCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VSRRAARKPSGRPYA*ARRALILARLPSKV
Trigger: CACCTTTGAGGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGGCTTCCTGGCTGCCCGTCTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTGCTGCTaGTTAAGGTTCCGGGCTGTGGACTCCTCAGCGGCGCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCSCCC*LRFRAVDSSAARSR
Trigger: CCTGCTGCGCGCCGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCCTCTTGGGGCAGCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGAGCTCCACTGGGTCCTaGGGAAAGAAGCTTATTCGG +
Preference number: 5 (lower is better)
Translates to: CPLGAADARRSSRSWLPRSSTGS*GKKLIR
Trigger: CCGAATAAGCTTCTTTCCCAAGGACCCAGTGGAGCT...CCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGCTGCCCCAAGAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp AGGCTGCTCAGCACCTGGAAGCTGCCTGTGATGGCTGCCAGCATATaGGTTGGACTCTTGTCCACATTGGCTACCCGGCGGCAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RLLSTWKLPVMAASI*VGLLSTLATRRQEA
Trigger: GGCCTCCTGCCGCCGGGTAGCCAATGTGGACAAGAGTCCAACTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGGTGCTGAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CCATCCAGGGTTGTTTCGAGCTTTCTAGAGGGCATGGTGCTAACCTaGCGGCTGGTGGCCAGAGGCCTCAGGGGGCTCTGGCTTCTAGGT +
Preference number: 5 (lower is better)
Translates to: PSRVVSSFLEGMVLT*RLVARGLRGLWLLG
Trigger: ACCTAGAAGCCAGAGCCCCCTGAGGCCTCTGGCCACCAGCCGGCAGGTTAGCACCATGCCCTCTAGAAAGCTCGAAACAACCCTGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GGTTGCTGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTaGTGCTGCTGGTTAAGGTTCCGGGCTGTGGACTCCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GCCCCCCCCCCCCCS*CCWLRFRAVDSSAA
Trigger: CGCCGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CCTCAGGGCTGGCCACACACTGCCGCAAGACTGTTAGCAGCTCATTaGTGTCCAGACGGGCAGCCAGGAAGCCATCAGGGAGGCCATATG +
Preference number: 5 (lower is better)
Translates to: PQGWPHTAARLLAAH*CPDGQPGSHQGGHM
Trigger: CATATGGCCTCCCTGATGGCTTCCTGGCTGCCCGTCTGGACACCAATGAGCTGCTAACAGTCTTGCGGCAGTGTGTGGCCAGCCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GCTCAGCACCTGGAAGCTGCCTGTGATGGCTGCCAGCATATGAGTTaGACTCTTGTCCACATTGGCTACCCGGCGGCAGGAGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: AQHLEAACDGCQHMS*TLVHIGYPAAGGPK
Trigger: CTTCGGGCCTCCTGCCGCCGGGTAGCCAATGTGGACAAGAGTCCAACTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGGTGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCACTCGGGCCACTCCTaGGTTCTCCCGGAACAGCTG +
Preference number: 5 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSHSGHS*VLPEQL
Trigger: CAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGAACAGCACCAGAGGCTaGGCATCCATGATGCTGGTC +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWNSTRG*ASMMLV
Trigger: GACCAGCATCATGGATGCCAAGCCTCTGGTGCTGTT...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCTCTCCAGCTGCCCTTaGTCCCCCTGGCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCLSSCP*SPWPET
Trigger: AGTTTCTGGCCAGGGGGACAAAGGGCAGCTGGAGAG...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CTGCTTGTTTGGGGGAGGTTTAGCACCCTCTGGCCCACCCTTGCCTaGCACCTCCCCAGTAGCTTGCTTTCCCATGGAGTCTCGACTCAC +
Preference number: 5 (lower is better)
Translates to: LLVWGRFSTLWPTLA*HLPSSLLSHGVSTH
Trigger: GTGAGTCGAGACTCCATGGGAAAGCAAGCTACTGGGGAGGTGGCAGGCAAGGGTGGGCCAGAGGGTGCTAAACCTCCCCCAAACAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AAGCTCTCCAGCTGCCCTTTGTCCCCCTGGCCAGAAACTACGCTCTaGTTGTTTGGGGGAGGTTTAGCACCCTCTGGCCCACCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: KLSSCPLSPWPETTL*LFGGGLAPSGPPLP
Trigger: AGGCAAGGGTGGGCCAGAGGGTGCTAAACCTCCCCCAAACAAGCAGAGCGTAGTTTCTGGCCAGGGGGACAAAGGGCAGCTGGAGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp ATTGGTGTCCAGACGGGCAGCCAGGAAGCCATCAGGGAGGCCATATaGATGGGCCCGCAGGGCATTGATCTTAGCCAGGCTCCCCTCAAA +
Preference number: 5 (lower is better)
Translates to: IGVQTGSQEAIREAI*MGPQGIDLSQAPLK
Trigger: TTTGAGGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGGCTTCCTGGCTGCCCGTCTGGACACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GGCAGCGGTTGCTGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTaGAGCTGCTGCTGCTGGTTAAGGTTCCGGGCTGTGGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: GSGCCCCCCCCCCCC*SCCCWLRFRAVDSS
Trigger: TGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACCGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GGCCCTCGGGATGACTTGGGCTTTGTGGGGCCTTCAGAGGCTGAGTaGGCTCCATCCAGGGTTGTTTCGAGCTTTCTAGAGGGCATGGTG +
Preference number: 5 (lower is better)
Translates to: GPRDDLGFVGPSEAE*APSRVVSSFLEGMV
Trigger: CACCATGCCCTCTAGAAAGCTCGAAACAACCCTGGATGGAGCCCACTCAGCCTCTGAAGGCCCCACAAAGCCCAAGTCATCCCGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TCTGACCGGCACTCACGGGACTCCAGACTGGTGGAGCGGATGCGTTaGACATTGATGGGACTATTAAGGCTCAAGCCTGGGCCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: SDRHSRDSRLVERMR*TLMGLLRLKPGPAS
Trigger: CGAGGCTGGCCCAGGCTTGAGCCTTAATAGTCCCATCAATGTCCAACGCATCCGCTCCACCAGTCTGGAGTCCCGTGAGTGCCGGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GCCTCCGGTATACCTCCTCTGGCAGTGAAAACACAGCCATTTGCCTaGGGCCTTTGCTCTCAGGGGCCACTTGGACGTAGGAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: ASGIPPLAVKTQPFA*GLCSQGPLGRRRAL
Trigger: GAGAGCCCTCCTACGTCCAAGTGGCCCCTGAGAGCAAAGGCCCCAGGCAAATGGCTGTGTTTTCACTGCCAGAGGAGGTATACCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCGGAACAGCTGGATCTaGCTGATCTTGCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWRNSWI*LILLNS
Trigger: CGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCG...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGGATCTGCCTTTATCATaGGAGGTGGAAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWDLPLS*EVEEAG
Trigger: GCCAGCCTCTTCCACCTCCAATGATAAAGGCAGATC...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTTGGCCAGAGCTTTaGGATGTGGGGTCAGATTTG +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWPWPEL*DVGSDL
Trigger: CAAATCTGACCCCACATCCAAAAGCTCTGGCCAAGG...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CATATCCAACCTGGGCACTGGCCCTTGAGGTGGCTCCTGCCAGGTACAAGGGAGCACCTCCCCAGTAGCTaGCTTTCCCATGGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: HIQPGHWPLRWLLPGTREHLPSS*LSHGVS
Trigger: CGAGACTCCATGGGAAAGCAAGCTACTGGGGAGGTG...CTCCCTTGTACCTGGCAGGAGCCACCTCAAGGGCCAGTGCCCAGGTTGGATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCTTCTGCAGCTGGGCTaGTCGCTCATCTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWLLQLG*SLICLF
Trigger: AAAGAGACAGATGAGCGACAAGCCCAGCTGCAGAAG...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCCTCGGCAGATACGCTaGCAGTCACAGCTGCGTCTC +
Preference number: 5 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSPRQIR*QSQLRL
Trigger: GAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GGCCCTCTGTCCTCAGGAACTGGAGGAAGCAGGCTTAGATTCTTCTaGTCGCTAAGCTGTGGGGACAGCGCTGGGTGTACTGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: GPLSSGTGGSRLRFF*SLSCGDSAGCTAKE
Trigger: CTCCTTGGCAGTACACCCAGCGCTGTCCCCACAGCTTAGCGAGCAGAAGAATCTAAGCCTGCTTCCTCCAGTTCCTGAGGACAGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CCAGCAGAAGTCGGCAGTACCCCGCAATCAGGCAGGCAAAGTTGGTaGCTTCAGGCCACTCCATCAACAGCACCAGAGGCTTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: PAEVGSTPQSGRQSW*LQATPSTAPEAWHP
Trigger: TGGATGCCAAGCCTCTGGTGCTGTTGATGGAGTGGCCTGAAGCCACCAACTTTGCCTGCCTGATTGCGGGGTACTGCCGACTTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TCCTGTAGTTGGGATCTCCCAAACACTCACCCCCTGAGGCACACGTaGTCAGGCACGAAACCCCACTTTCAGGGTCTGACCGGCACTCAC +
Preference number: 5 (lower is better)
Translates to: SCSWDLPNTHPLRHT*SGTKPHFQGLTGTH
Trigger: GTGAGTGCCGGTCAGACCCTGAAAGTGGGGTTTCGTGCCTGACCACGTGTGCCTCAGGGGGTGAGTGTTTGGGAGATCCCAACTACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGGATTGGACCTCAGCTaGGCCTTCTTTGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: LASVEGHPSPLLGDLATQGLDLS*AFFAAL
Trigger: CAGTGCTGCAAAGAAGGCCAAGCTGAGGTCCAATCC...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGGTGGGTGGGCGCATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGTTCTTGCTCCTTCCTTaGTTCCCGCATGTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: WWVGASGIAPSLLGLALWFLLLP*FPHVEV
Trigger: TACCTCCACATGCGGGAACAAAGGAAGGAGCAAGAA...CCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGATGCGCCCACCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGCCCTGTTGGACGGTGTaGCCAAGGCTGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGPCWTV*PRLCQE
Trigger: CTCCTGGCACAGCCTTGGCAACACCGTCCAACAGGG...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCAGAAGTTCCCCCTGGCTaGGTGGCTTTAGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPEVPPG*VALEVP
Trigger: AGGAACTTCTAAAGCCACCAAGCCAGGGGGAACTTC...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCACTGCACACTTGCTTTTaGGACCCAAGCCTACTGGGA +
Preference number: 5 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPLHTCF*DPSLLG
Trigger: TCCCAGTAGGCTTGGGTCCAAAAAGCAAGTGTGCAG...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp TTTCTTGCTCCTTCCTTTGTTCCCGCATGTGGAGGTAGCAGAAGCTaGCAAGCTCAGAGTCGGCAGGCGGGGTCGTGCATCGGCTCGACT +
Preference number: 5 (lower is better)
Translates to: FLAPSFVPACGGSRS*QAQSRQAGSCIGST
Trigger: AGTCGAGCCGATGCACGACCCCGCCTGCCGACTCTGAGCTTGTCAGCTTCTGCTACCTCCACATGCGGGAACAAAGGAAGGAGCAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp ACTGCCAAGGAGTATGGTCTGTCTCCCTGTACCTGGACTTCTGACTaGGGTATCTTTCTCCGAGCGCCAGTCGGGGCAGGACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: TAKEYGLSPCTWTSD*GIFLRAPVGAGLWP
Trigger: TGGCCAGAGTCCTGCCCCGACTGGCGCTCGGAGAAAGATACCTCAGTCAGAAGTCCAGGTACAGGGAGACAGACCATACTCCTTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp GACCTCTCTAGGCAACATTCCCAGGGGTGGGTGTGGGTAGACATCTaGGGTCAGCGAGACCGTGTCACCCTGGTCCAGCTCACTGATACT +
Preference number: 5 (lower is better)
Translates to: DLSRQHSQGWVWVDI*GQRDRVTLVQLTDT
Trigger: AGTATCAGTGAGCTGGACCAGGGTGACACGGTCTCGCTGACCTCAGATGTCTACCCACACCCACCCCTGGGAATGTTGCCTAGAGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GGTCTCAATGAGGCTGCTCAGCACCTGGAAGCTGCCTGTGATGGCTaGCAGCATATGAGTTGGACTCTTGTCCACATTGGCTACCCGGCG +
Preference number: 5 (lower is better)
Translates to: GLNEAAQHLEAACDG*QHMSWTLVHIGYPA
Trigger: CGCCGGGTAGCCAATGTGGACAAGAGTCCAACTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGGTGCTGAGCAGCCTCATTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp ATGCTGGTCTCCACTCGGGCCACTCCTTGGTTCTCCCGGAACAGCTaGATCTTGCTGATCTTGCTGAACTCGGACAGCACAGTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: MLVSTRATPWFSRNS*ILLILLNSDSTVVR
Trigger: CCTCACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGACCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp ATAGCTCTTAGGAGGGAAGCTTTGAACAGGAAACCTGTCCTCCGGTaGGGAAAGGTGGAGGTTGTCAGCCCTGCTGCCCGTGGATGCTCG +
Preference number: 5 (lower is better)
Translates to: IALRREALNRKPVLR*GKVEVVSPAARGCS
Trigger: CGAGCATCCACGGGCAGCAGGGCTGACAACCTCCACCTTTCCCCACCGGAGGACAGGTTTCCTGTTCAAAGCTTCCCTCCTAAGAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GAGCTAGCTCAAGCTTGTACTCAGAAATCTGAGAGACGTAGGGCTTaGGAGCACGAGCCTCAGGGCTGGCCACACACTGCCGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: ELAQACTQKSERRRA*EHEPQGWPHTAARL
Trigger: CAGTCTTGCGGCAGTGTGTGGCCAGCCCTGAGGCTCGTGCTCCCAAGCCCTACGTCTCTCAGATTTCTGAGTACAAGCTTGAGCTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCATGGATCTTGCTGATCTaGCTGAACTCGGACAGCACA +
Preference number: 5 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPWILLI*LNSDST
Trigger: TGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCA...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CTGGCTTCTGTAGAAGGACACCCCTCCCCCTTGCTGGGAGACCTTGCCACTCAGATCCGTCCTGCTTTCTaGCTCCTTCCTTTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LASVEGHPSPLLGDLATQIRPAF*LLPLFP
Trigger: CGGGAACAAAGGAAGGAGCAAGAAAGCAGGACGGAT...CTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGGGGTGTCCTTCTACAGAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGCTCAGCCTGACTTCCTaGGGCAGGTTTTCCCTAAGC +
Preference number: 5 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKLSLTS*GRFSLS
Trigger: GCTTAGGGAAAACCTGCCCAAGGAAGTCAGGCTGAG...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GTGGTGGGCGTAATGGCAAGGGACCTTTGCCCTCACAGTGACGCCCAGAGGCCACTTAGGAGGGAAGCTTaGAACAGGAAACCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VVGVMARDLCPHSDAQRPLRREA*NRKPVL
Trigger: GAGGACAGGTTTCCTGTTCAAAGCTTCCCTCCTAAG...TGGCCTCTGGGCGTCACTGTGAGGGCAAAGGTCCCTTGCCATTACGCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATGAGGCCCGAAGCTCCTaGAACTTGAGAGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHEARSS*NLRASS
Trigger: TGAGCTAGCTCTCAAGTTCAAGGAGCTTCGGGCCTC...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp CTGAAGAGTTGGTTTCATGGCCCGAGTCCAGCGATGACTCAGGAGTaGTTGTGGCCAGCACAATCAGACCTGCAGTCTGTGGGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LKSWFHGPSPAMTQE*LWPAQSDLQSVGVV
Trigger: CACCACCCCCACAGACTGCAGGTCTGATTGTGCTGGCCACAATCACTCCTGAGTCATCGCTGGACTCGGGCCATGAAACCAACTCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp GTGTACTGCCAAGGAGTATGGTCTGTCTCCCTGTACCTGGACTTCTaGCTGAGGTATCTTTCTCCGAGCGCCAGTCGGGGCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: VYCQGVWSVSLYLDF*LRYLSPSASRGRTL
Trigger: CAGAGTCCTGCCCCGACTGGCGCTCGGAGAAAGATACCTCAGTCAGAAGTCCAGGTACAGGGAGACAGACCATACTCCTTGGCAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AAGGCTGTGCCAGGAGTGGCTAGACTCTTACTGTGTACCACCTGCTaGAGGGCAGCTGAGATTATGGCTGGGGTCACGTTGCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: KAVPGVARLLLCTTC*RAAEIMAGVTLPFG
Trigger: CCCAAAAGGCAACGTGACCCCAGCCATAATCTCAGCTGCCCTGCAGCAGGTGGTACACAGTAAGAGTCTAGCCACTCCTGGCACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GCCAAGGCTGTGCCAGGAGTGGCTAGACTCTTACTGTGTACCACCTaGTGCAGGGCAGCTGAGATTATGGCTGGGGTCACGTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: AKAVPGVARLLLCTT*CRAAEIMAGVTLPF
Trigger: AAAAGGCAACGTGACCCCAGCCATAATCTCAGCTGCCCTGCAGCAGGTGGTACACAGTAAGAGTCTAGCCACTCCTGGCACAGCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp AGAGGCTTGGCATCCATGATGCTGGTCTCCACTCGGGCCACTCCTTaGTTCTCCCGGAACAGCTGGATCTTGCTGATCTTGCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: RGLASMMLVSTRATP*FSRNSWILLILLNS
Trigger: CGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGACCAGCATCATGGATGCCAAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CTTCAGCCCCAAGGGAATTGTCCAAAGTATAGGACCTGGCCCTGCTaGCACAAGGCTCATGGTCTAGGCTGGCTGCGTCAAAGTCATCGG +
Preference number: 5 (lower is better)
Translates to: LQPQGNCPKYRTWPC*HKAHGLGWLRQSHR
Trigger: CCGATGACTTTGACGCAGCCAGCCTAGACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCTATACTTTGGACAATTCCCTTGGGGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TTGGGCTCTGCAGAGCCATGGGATAGCCAGCTCGGGGAACCAAGCTaGTCTCTTCAAGCTTGCTGCTTTTGGATAAGCTCTCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGSAEPWDSQLGEPS*SLQACCFWISSPAA
Trigger: GGCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTGAAGAGACCAGCTTGGTTCCCCGAGCTGGCTATCCCATGGCTCTGCAGAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGTCTTCATCAGAGCTGTaGTCTCGGAAACCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: GEEEDHANTLRAVVVGERSSSEL*SRKPGG
Trigger: ACCCCCTGGTTTCCGAGACAACAGCTCTGATGAAGA...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGAAGTAGGTGGTGTTTaGGTGCTGCTTCATGGCCGA +
Preference number: 5 (lower is better)
Translates to: GEEEDHANTLRAVVVGEREVGGV*VLLHGR
Trigger: TCGGCCATGAAGCAGCACCAAAACACCACCTACTTC...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCTCAAGCTTGCTGCTTTaGGATAAGCTCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCSSLLL*DKLSSC
Trigger: GCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTGA...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGGCCAGGTGCTGGAGGTaGAAGATACTCTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRARCWR*KILCAW
Trigger: CCAGGCACAGAGTATCTTCAACCTCCAGCACCTGGC...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GGAGCCCACGCAGGTGACGTCCTTGCTCCTGACTTTGAACAGCTCTaGGCTTGGGATCATCTTCATCAGAGCTGTTGTCTCGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: GAHAGDVLAPDFEQL*AWDHLHQSCCLGNQ
Trigger: CTGGTTTCCGAGACAACAGCTCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp AATTCAGGGCTTCAGCCCCAAGGGAATTGTCCAAAGTATAGGACCTaGCCCTGCTGGCACAAGGCTCATGGTCTAGGCTGGCTGCGTCAA +
Preference number: 5 (lower is better)
Translates to: NSGLQPQGNCPKYRT*PCWHKAHGLGWLRQ
Trigger: TTGACGCAGCCAGCCTAGACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCTATACTTTGGACAATTCCCTTGGGGCTGAAGCCCTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CACGCAGGTGACGTCCTTGCTCCTGACTTTGAACAGCTCTGCGCTTaGGATCATCTTCATCAGAGCTGTTGTCTCGGAAACCAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: HAGDVLAPDFEQLCA*DHLHQSCCLGNQGV
Trigger: CACCCCCTGGTTTCCGAGACAACAGCTCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGTGGTGAGGTTGGTTTaGAGGTCAATGACATGGCTG +
Preference number: 5 (lower is better)
Translates to: PPPCWETLPLRRLYCARIVVRLV*RSMTWL
Trigger: CAGCCATGTCATTGACCTCAAAACCAACCTCACCAC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CCTCCCCCTTGCTGGGAGACCTTGCCACTCAGGAGGCTTTATTGCGCTAGGATCGATCACCTCGTAACCTaGGCCAGAGCTTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: PPPCWETLPLRRLYCARIDHLVT*ARAFGC
Trigger: ACATCCAAAAGCTCTGGCCAAGGTTACGAGGTGATC...GATCCTAGCGCAATAAAGCCTCCTGAGTGGCAAGGTCTCCCAGCAAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAGGGGAAAGGTGGAGGTaGTCAGCCCTGCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRGERWR*SALLPV
Trigger: CACGGGCAGCAGGGCTGACAACCTCCACCTTTCCCC...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCCCTGACTCTATCTCCTaGACCTCTCTAGGCAACATT +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCPDSIS*TSLGNI
Trigger: AATGTTGCCTAGAGAGGTCAAGGAGATAGAGTCAGG...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCGAAGCTCCTTGAACTaGAGAGCTAGCTCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSRSSLN*RASSSL
Trigger: CAAGCTTGAGCTAGCTCTCAAGTTCAAGGAGCTTCG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp GCTCCTGGGCGTGATCTCGTACTGTCCGAGTCTGTACACTGTCAATaGGTGTTACCGGAATCTCATCATACAGGAGCCCACGCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: APGRDLVLSESVHCQ*VLPESHHTGAHAGD
Trigger: GTCACCTGCGTGGGCTCCTGTATGATGAGATTCCGGTAACACTCATTGACAGTGTACAGACTCGGACAGTACGAGATCACGCCCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp AGACATCTGAGGTCAGCGAGACCGTGTCACCCTGGTCCAGCTCACTaGTACTGTAGTGGCGCATCAGTTTCCTGTAGTTGGGATCTCCCA +
Preference number: 5 (lower is better)
Translates to: RHLRSARPCHPGPAH*YCSGASVSCSWDLP
Trigger: TGGGAGATCCCAACTACAGGAAACTGATGCGCCACTACAGTATCAGTGAGCTGGACCAGGGTGACACGGTCTCGCTGACCTCAGATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GCAGCATCCAGGACCTGCAGGGTTCTGCTTACCACAGGCACCACCTaGTCATCCAACTTCATGCCAGGCAGAATCTTCATGGGGATTGAA +
Preference number: 5 (lower is better)
Translates to: AASRTCRVLLTTGTT*SSNFMPGRIFMGIE
Trigger: TTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGATGAGCAGGTGGTGCCTGTGGTAAGCAGAACCCTGCAGGTCCTGGATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp AGAGACCTCGGGGCCCAGCTGCTGCTGAGAATTCCGTGTGGTCTCTaGAGCACCCGGGCTCATTTTAAACTTCAGATTCTTGCTGACACT +
Preference number: 5 (lower is better)
Translates to: RDLGAQLLLRIPCGL*STRAHFKLQILADT
Trigger: AGTGTCAGCAAGAATCTGAAGTTTAAAATGAGCCCGGGTGCTCCAGAGACCACACGGAATTCTCAGCAGCAGCTGGGCCCCGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GCAGATGCTAGGAGGAGCTCGAGGTCCTGGCTCCCCCGGTGCCCAACTCAGAGCCCTTCTTCATCATTTTaGCATCTGTTTCTCCAATTG +
Preference number: 5 (lower is better)
Translates to: ADARRSSRSWLPRCPTQSPSSSF*HLFLQL
Trigger: CAATTGGAGAAACAGATGCAAAAATGATGAAGAAGG...GCTCTGAGTTGGGCACCGGGGGAGCCAGGACCTCGAGCTCCTCCTAGCATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGAGCACAGTGGTGAGGTaGGTTTTGAGGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: GEEEDHANTLRAVVVGERSTVVR*VLRSMT
Trigger: TGTCATTGACCTCAAAACCAACCTCACCACTGTGCT...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCAAGATTAGGTTCTCGTaGACATCCGTCCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCKIRFS*TSVLLS
Trigger: AGAAAGCAGGACGGATGTCAACGAGAACCTAATCTT...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGCTGGTCTCTTCAAGCTaGCTGCTTTTGGATAAGCTC +
Preference number: 5 (lower is better)
Translates to: GEEEDHANTLRAVVVGERLVSSS*LLLDKL
Trigger: GAGCTTATCCAAAAGCAGCAAGCTTGAAGAGACCAG...CCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp TGCCACCCGGTTGAGCCAGCCACTGACAGCCAGACATGGCTGTATTCTGCGCATCGAATGGAACAGCACTaGCTGCTTTCGCTATCTTCA +
Preference number: 5 (lower is better)
Translates to: CHPVEPATDSQTWLYSAHRMEQH*LLSLSS
Trigger: TGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCG...ATGCGCAGAATACAGCCATGTCTGGCTGTCAGTGGCTGGCTCAACCGGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp CTCTCACTGCCAGCCACGAAGCCAAAGCCATATATAGGGTCTCGGTaGATGGTCACTTGTCGCAGTGTCTCTGCTGGCAGCTGTACACAT +
Preference number: 5 (lower is better)
Translates to: LSLPATKPKPYIGSR*MVTCRSVSAGSCTH
Trigger: ATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATATGGCTTTGGCTTCGTGGCTGGCAGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp CCCTTGGTGCTGCTAGAAGGATGCATTTGGTGGGCCTTCAGCTGTTaGGAGAGCGACTTCCGAAGGTTCTTCTCTTTGATGCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PLVLLEGCIWWAFSC*ESDFRRFFSLMPCR
Trigger: TCTGCAGGGCATCAAAGAGAAGAACCTTCGGAAGTCGCTCTCTCAACAGCTGAAGGCCCACCAAATGCATCCTTCTAGCAGCACCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp AGAGCCTGCAGAGTAGACACAAGAGCGTCATCCAGCTCCTGGGCGTaGTCTCGTACTGTCCGAGTCTGTACACTGTCAATGAGTGTTACC +
Preference number: 5 (lower is better)
Translates to: RACRVDTRASSSSWA*SRTVRVCTLSMSVT
Trigger: GGTAACACTCATTGACAGTGTACAGACTCGGACAGTACGAGATCACGCCCAGGAGCTGGATGACGCTCTTGTGTCTACTCTGCAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AAGCTGGTCTCTTCAAGCTTGCTGCTTTTGGATAAGCTCTCCAGCTaGCCTTTGTCCCCCTGGCCAGAAACTACGCTCTGCTTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: KLVSSSLLLLDKLSS*PLSPWPETTLCLFG
Trigger: CCCAAACAAGCAGAGCGTAGTTTCTGGCCAGGGGGACAAAGGGCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTGAAGAGACCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CTTGGACGTAGGAGGGCTCTCCTAGAGTTGGTGACTCTGCACACTTaGTTTTTGGACCCAAGCCTACTGGGAAGCCTGACTCTATCTCCT +
Preference number: 5 (lower is better)
Translates to: LGRRRALLELVTLHT*FLDPSLLGSLTLSP
Trigger: AGGAGATAGAGTCAGGCTTCCCAGTAGGCTTGGGTCCAAAAAGCAAGTGTGCAGAGTCACCAACTCTAGGAGAGCCCTCCTACGTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGGTTCCCATCTGTTTCTCCAATaGTCACCTGCTCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: RGRPCQHSEGSGRGGKGSHLFLQ*SPAQRI
Trigger: GATTCTCTGAGCAGGTGACAATTGGAGAAACAGATG...GGAACCCTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGGCCTTCAGCTGTaGAGAGAGCGACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAVGLQL*RERLPK
Trigger: CTTCGGAAGTCGCTCTCTCAACAGCTGAAGGCCCAC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGTCCAGGCCTACAGTGTaGAATAAAACACCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKSRPTV*NKTPVK
Trigger: CTTCACTGGTGTTTTATTCAACACTGTAGGCCTGGA...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AGGAGGATGCTAAACAGTGTGAATTCCCTTCCAGATGGTTCCAGAGAGGGAGAGATCAGGCAGGCAAAGTaGGTGGCTTCAGGCCACTCC +
Preference number: 5 (lower is better)
Translates to: RRMLNSVNSLPDGSREGEIRQAK*VASGHS
Trigger: GGAGTGGCCTGAAGCCACCAACTTTGCCTGCCTGAT...CTCTCCCTCTCTGGAACCATCTGGAAGGGAATTCACACTGTTTAGCATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGAACTACCTCTTCCACTTaGGCCAGCAGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRTTSST*ASSSWR
Trigger: GCGCCAGGAGCTGCTGGCCAAAGTGGAAGAGGTAGT...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AGAGAATCGGACCTTCACGGGATTGGACCTCAGCTTGGCCTTCTTTaGAGCACTGATGAAGGCAGATTTAGGGGACTGATGAGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: RESDLHGIGPQLGLL*STDEGRFRGLMSVQ
Trigger: CTGCACACTCATCAGTCCCCTAAATCTGCCTTCATCAGTGCTGCAAAGAAGGCCAAGCTGAGGTCCAATCCCGTGAAGGTCCGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp CGCACTTGCGGTAGTAGAAGCAGTAGCGAATGGAACAGCACTTGCTaGTTTCGCTATCTTCATCCAGATCAGCTGGCCTCCGGTATACCT +
Preference number: 5 (lower is better)
Translates to: RTCGSRSSSEWNSTC*FRYLHPDQLASGIP
Trigger: AGGTATACCGGAGGCCAGCTGATCTGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TCTGTTCTGGCCCAGTATACTCAAGCACAAGAGCAAAGTGCTCAATaGACCTCAGGGAGAGTCGGTCCTGTAGAGTCGCCATCACATCCT +
Preference number: 5 (lower is better)
Translates to: SVLAQYTQAQEQSAQ*TSGRVGPVESPSHP
Trigger: AGGATGTGATGGCGACTCTACAGGACCGACTCTCCCTGAGGTCCATTGAGCACTTTGCTCTTGTGCTTGAGTATACTGGGCCAGAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp ATCTGGAATAGCGCCCTCTCTCCTTGGCTTGGCGCTGTGGCCTACCGCTACTGCTCAAATGTGAATGACTaGATCTGCCCATTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: IWNSALSPWLGAVAYRYCSNVND*ICPFSR
Trigger: CCTAGAAAATGGGCAGATCAAGTCATTCACATTTGA...GCAGTAGCGGTAGGCCACAGCGCCAAGCCAAGGAGAGAGGGCGCTATTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GAAACACACACTCAACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTACTGGAGCTTTGCTaGAATGGCGGAGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: ETHTQPRDAKTTKLKLGAVLELC*NGGALG
Trigger: ACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTAC...GGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTTGAGTGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CATCTCTGGCCCATTAAGCATCTTGGTCCTGTGGGAGGAGAGTCAAGGAAGGGGATCTGCTCCTGGAGTTaGACTTTGCAAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: HLWPIKHLGPVGGESRKGICSWS*TLQESQ
Trigger: CTGTGACTCTTGCAAAGTCAAACTCCAGGAGCAGAT...CCCCTTCCTTGACTCTCCTCCCACAGGACCAAGATGCTTAATGGGCCAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATATTTGCCTGGGGCCTTaGCTCTCAGGGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PISPREEIDKIQLCGGRNICLGP*LSGATW
Trigger: CCAAGTGGCCCCTGAGAGCAAAGGCCCCAGGCAAAT...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGAGAAGAGGAAGACCATGCCAACACTCTGAGGGCAGTGGTCGTGGGGGAAAGGAATCTTCATGGGGATaGAATAGGAGAGCTCATCTT +
Preference number: 5 (lower is better)
Translates to: GRRGRPCQHSEGSGRGGKESSWG*NRRAHL
Trigger: AAGATGAGCTCTCCTATTCAATCCCCATGAAGATTC...CTTTCCCCCACGACCACTGCCCTCAGAGTGTTGGCATGGTCTTCCTCTTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp AAGGTCGGCAGTTCATTCAAAATGCGAAGGTACTGGAGCTTTGCTTaGATGGCGGAGCCCTTGGTGCTGCTAGAAGGATGCATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: KVGSSFKMRRYWSFA*MAEPLVLLEGCIWW
Trigger: CCACCAAATGCATCCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACTGCCGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGTCGCACTTGCGGTAGTAGAAGCAGTAGCGAATGGAACAGCACTTaGTGCTTTCGCTATCTTCATCCAGATCAGCTGGCCTCCGGTATA +
Preference number: 5 (lower is better)
Translates to: CRTCGSRSSSEWNST*CFRYLHPDQLASGI
Trigger: TATACCGGAGGCCAGCTGATCTGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AGAGCTCATCTTTGCCATCGCTGGCATCATCTGCCATGTCGCACTTaGGGTAGTAGAAGCAGTAGCGAATGGAACAGCACTTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RAHLCHRWHHLPCRT*GSRSSSEWNSTCCF
Trigger: AAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGCCAGGCAGAATCTTCATGGGGATTGAATAGGAGAGCTCATCTTTaGCATCGCTGGCATCATCTGCCATGTCGCACTTGCGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: CQAESSWGLNRRAHL*HRWHHLPCRTCGSR
Trigger: TCTACTACCGCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GACATCATCTCTGACATATCTGTGAGCTCTGAAGAGTTGGTTTCATaGCCCGAGTCCAGCGATGACTCAGGAGTGATTGTGGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: DIISDISVSSEELVS*PESSDDSGVIVAST
Trigger: TGTGCTGGCCACAATCACTCCTGAGTCATCGCTGGACTCGGGCCATGAAACCAACTCTTCAGAGCTCACAGATATGTCAGAGATGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CAGGCACCACCTGCTCATCCAACTTCATGCCAGGCAGAATCTTCATaGGGATTGAATAGGAGAGCTCATCTTTGCCATCGCTGGCATCAT +
Preference number: 5 (lower is better)
Translates to: QAPPAHPTSCQAESS*GLNRRAHLCHRWHH
Trigger: ATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGATGAGCAGGTGGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp CACCTGCTCATCCAACTTCATGCCAGGCAGAATCTTCATGGGGATTaGATAGGAGAGCTCATCTTTGCCATCGCTGGCATCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: HLLIQLHARQNLHGD*IGELIFAIAGIICH
Trigger: ATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGATGAGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GCCATATATAGGGTCTCGGTGAATGGTCACTTGTCGCAGTGTCTCTaGTGGCAGCTGTACACATTCCATATCATTTGCGCTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AIYRVSVNGHLSQCL*WQLYTFHIICALFL
Trigger: CAGGAAGAGAGCGCAAATGATATGGAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp AGTGAAGGTCGGCAGTTCATTCAAAATGCGAAGGTACTGGAGCTTTaGTTGAATGGCGGAGCCCTTGGTGCTGCTAGAAGGATGCATTTG +
Preference number: 5 (lower is better)
Translates to: SEGRQFIQNAKVLEL*LNGGALGAARRMHL
Trigger: CAAATGCATCCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACTGCCGACCTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CAGGGGCTGCTTGTCCTGGAGAATCAGGAACTTGTGATTCTGTTCTaGCCCAGTATACTCAAGCACAAGAGCAAAGTGCTCAATGGACCT +
Preference number: 5 (lower is better)
Translates to: QGLLVLENQELVILF*PSILKHKSKVLNGP
Trigger: AGGTCCATTGAGCACTTTGCTCTTGTGCTTGAGTATACTGGGCCAGAACAGAATCACAAGTTCCTGATTCTCCAGGACAAGCAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp CATCATCTGCCATGTCGCACTTGCGGTAGTAGAAGCAGTAGCGAATaGAACAGCACTTGCTGCTTTCGCTATCTTCATCCAGATCAGCTG +
Preference number: 5 (lower is better)
Translates to: HHLPCRTCGSRSSSE*NSTCCFRYLHPDQL
Trigger: CAGCTGATCTGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCGACATGGCAGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GAATCTTCATGGGGATTGAATAGGAGAGCTCATCTTTGCCATCGCTaGCATCATCTGCCATGTCGCACTTGCGGTAGTAGAAGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: ESSWGLNRRAHLCHR*HHLPCRTCGSRSSS
Trigger: GCTACTGCTTCTACTACCGCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATGATGTGGGGTCAGATTaGGTCCGGGGTCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: PISPREEIDKIQLCGGRNDVGSD*VRGLVS
Trigger: AGAAACCAGACCCCGGACCAAATCTGACCCCACATC...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp CCTATCAGCCCCAGAGAAGAGATAGATAAAATACAGCTCTGTGGTGGGCGTAATGTGAGCTCTGAAGAGTaGGTTTCATGGCCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PISPREEIDKIQLCGGRNVSSEE*VSWPES
Trigger: GGACTCGGGCCATGAAACCAACTCTTCAGAGCTCAC...ATTACGCCCACCACAGAGCTGTATTTTATCTATCTCTTCTCTGGGGCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp AACCACGAGATGCAAAGACCACAAAGCTCAAACTTGGGGCCGTGGATGGGGAGGTTAAACTTCAGATTCTaGCTGACACTGCTGCTCATC +
Preference number: 5 (lower is better)
Translates to: NHEMQRPQSSNLGPWMGRLNFRF*LTLLLI
Trigger: GATGAGCAGCAGTGTCAGCAAGAATCTGAAGTTTAA...CCTCCCCATCCACGGCCCCAAGTTTGAGCTTTGTGGTCTTTGCATCTCGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp CTTCTCCACATTCTTGAGTGTGATCTTCTGACTAGGCCGAGTGGCTaGGACAGTGATATAGATGTGAAGGGCAGCAAGGCCCAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: LLHILECDLLTRPSG*DSDIDVKGSKAQKH
Trigger: ATGCTTTTGGGCCTTGCTGCCCTTCACATCTATATCACTGTCTCAGCCACTCGGCCTAGTCAGAAGATCACACTCAAGAATGTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 90 bp ATTTGGTCCGGGGTCTGGTTTCTTCGAAGAAGATTAGGTTCTCGTTaGCATCCGTCCTGCTTTCTTGCTCCTTCCTTTGTTCCCGCATGT +
Preference number: 5 (lower is better)
Translates to: IWSGVWFLRRRLGSR*HPSCFLAPSFVPAC
Trigger: ACATGCGGGAACAAAGGAAGGAGCAAGAAAGCAGGACGGATGTCAACGAGAACCTAATCTTCTTCGAAGAAACCAGACCCCGGACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp GCTTCCTTCTTCATCATTTTTGCATCTGTTTCTCCAATTGTCACCTaGTCAGAGAATCGGACCTTCACGGGATTGGACCTCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ASFFIIFASVSPIVT*SENRTFTGLDLSLA
Trigger: GGCCAAGCTGAGGTCCAATCCCGTGAAGGTCCGATTCTCTGAGCAGGTGACAATTGGAGAAACAGATGCAAAAATGATGAAGAAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 90 bp TGGCTTGGTGGCTTTAGAAGTTCCTCAAGGAACTCCAGTTCATACTaGTTTACCTTCTGCAGCTGGGCTTGTCGCTCATCTGTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: WLGGFRSSSRNSSSY*FTFCSWACRSSVSF
Trigger: GAAAGAGACAGATGAGCGACAAGCCCAGCTGCAGAAGGTAAAGCAGTATGAACTGGAGTTCCTTGAGGAACTTCTAAAGCCACCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp TTTACCTTCTGCAGCTGGGCTTGTCGCTCATCTGTCTCTTTCTTCTaGCGGGTAGGGAAGGTGGCAGAAAATAAGTTGCGTAGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: FTFCSWACRSSVSFF*RVGKVAENKLRSLK
Trigger: TTTCAGACTACGCAACTTATTTTCTGCCACCTTCCCTACCCGCCAGAAGAAAGAGACAGATGAGCGACAAGCCCAGCTGCAGAAGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS-3UTR CAA 90 bp GGGTGTGGGAAACAAGCAGCTATGGAGAAGTGGACGAGAAGCAATCTATACAGACTGCCAGCATATGAGTaGGACTCTTGTCCACATTGG +
Preference number: 5 (lower is better)
Translates to: GCGKQAAMEKWTRSNLYRLPAYE*DSCPHW
Trigger: CCAATGTGGACAAGAGTCCAACTCATATGCTGGCAG...TCTGTATAGATTGCTTCTCGTCCACTTCTCCATAGCTGCTTGTTTCCCACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp ATATATAGGGTCTCGGTGAATGGTCACTTGTCGCAGTGTCTCTGCTaGCAGCTGTACACATTCCATATCATTTGCGCTCTCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: IYRVSVNGHLSQCLC*QLYTFHIICALFLH
Trigger: ATGCAGGAAGAGAGCGCAAATGATATGGAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 90 bp GACAGTGATATAGATGTGAAGGGCAGCAAGGCCCAAAAGCATCTCTaGCTTAGGTTCCATTCCAAAGCGTTCTCGGATAACATCATTACG +
Preference number: 5 (lower is better)
Translates to: DSDIDVKGSKAQKHL*LRFHSKAFSDNIIT
Trigger: CGTAATGATGTTATCCGAGAACGCTTTGGAATGGAACCTAAGCCAGAGATGCTTTTGGGCCTTGCTGCCCTTCACATCTATATCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp ACCCTCTCCCTCTCCCGGAGGCCAGGCGCTGGGGTCTaGGCAGCCTGTGGCCGTCCCCCTCGGCAGATACGC +
Preference number: 6 (lower is better)
Translates to: TLSLSRRPGAGV*AACGRPPRQIR
Trigger: GCGTATCTGCCGAGGGGGACGGCCACAGGCTGCCCAGACCCCAGCGCCTGGCCTCCGGGAGAGGGAGAGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CCTCCGGTGGGGAAAGGTGGAGGTTGTCAGCCCTGCTaGCCGTGGATGCTCGGGGGCTGGCAGAGACCTCGG +
Preference number: 6 (lower is better)
Translates to: PPVGKGGGCQPC*PWMLGGWQRPR
Trigger: CCGAGGTCTCTGCCAGCCCCCGAGCATCCACGGGCAGCAGGGCTGACAACCTCCACCTTTCCCCACCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GCTGGGGTCTGGGCAGCCTGTGGCCGTCCCCCTCGGCAGATACGCTaGCAGTCACAGCTGCGTCTCTGTTCGCGAGACATGCCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: AGVWAACGRPPRQIR*QSQLRLCSRDMPGP
Trigger: GGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGCCACAGGCTGCCCAGACCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CTGCGTCTCTGTTCGCGAGACATGCCAGGTCCCTGCTaGACAGGGCTACTGCGGAGCTGGCAGCTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LRLCSRDMPGPC*TGLLRSWQLQR
Trigger: CCGCTGCAGCTGCCAGCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CTCATAACAGTCGATGACGGGGAGTCTGGTGGGTGGTaGCCTGTGGCTGCTGGCAGCGGTGGCGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LITVDDGESGGW*PVAAGSGGGGS
Trigger: GCTGCCACCGCCACCGCTGCCAGCAGCCACAGGGCACCACCCACCAGACTCCCCGTCATCGACTGTTATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CAGCTGCGTCTCTGTTCGCGAGACATGCCAGGTCCCTaGTGCACAGGGCTACTGCGGAGCTGGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLRLCSRDMPGP*CTGLLRSWQLQ
Trigger: CTGCAGCTGCCAGCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GGGCAGCCTGTGGCCGTCCCCCTCGGCAGATACGCTTaGAGTCACAGCTGCGTCTCTGTTCGCGAGACATGC +
Preference number: 6 (lower is better)
Translates to: GQPVAVPLGRYA*SHSCVSVRETC
Trigger: GCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGCCACAGGCTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GCTGGCAGCGGTGGCGGTGGCAGCGGTTGCTGCTGCTaGTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: AGSGGGGSGCCC*CCCCCCCCCSC
Trigger: GCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACCGCTGCCACCGCCACCGCTGCCAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CGGGCAGCCAGGAAGCCATCAGGGAGGCCATATGCATaGGCCCGCAGGGCATTGATCTTAGCCAGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: RAARKPSGRPYA*ARRALILARLP
Trigger: GGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGGCTTCCTGGCTGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp ACAGGAAACCTGTCCTCCGGTGGGGAAAGGTGGAGGTaGTCAGCCCTGCTGCCCGTGGATGCTCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: TGNLSSGGERWR*SALLPVDARGL
Trigger: CAGCCCCCGAGCATCCACGGGCAGCAGGGCTGACAACCTCCACCTTTCCCCACCGGAGGACAGGTTTCCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GCCGTCCCCCTCGGCAGATACGCTTGCAGTCACAGCTaGGTCTCTGTTCGCGAGACATGCCAGGTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AVPLGRYACSHS*VSVRETCQVPA
Trigger: AGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp TGGGCAGCCTGTGGCCGTCCCCCTCGGCAGATACGCTaGCAGTCACAGCTGCGTCTCTGTTCGCGAGACATG +
Preference number: 6 (lower is better)
Translates to: WAACGRPPRQIR*QSQLRLCSRDM
Trigger: CATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGCGTATCTGCCGAGGGGGACGGCCACAGGCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CTCTCCAGCTGCCCTTTGTCCCCCTGGCCAGAAACTACGCTCTGCTaGTTTGGGGGAGGTTTAGCACCCTCTGGCCCACCCTTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LSSCPLSPWPETTLC*FGGGLAPSGPPLPA
Trigger: GGCAGGCAAGGGTGGGCCAGAGGGTGCTAAACCTCCCCCAAACAAGCAGAGCGTAGTTTCTGGCCAGGGGGACAAAGGGCAGCTGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CGGCACTCACGGGACTCCAGACTGGTGGAGCGGATGCGTTGGACATaGATGGGACTATTAAGGCTCAAGCCTGGGCCAGCCTCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RHSRDSRLVERMRWT*MGLLRLKPGPASGC
Trigger: GCAGCCCGAGGCTGGCCCAGGCTTGAGCCTTAATAGTCCCATCAATGTCCAACGCATCCGCTCCACCAGTCTGGAGTCCCGTGAGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp ACACGTGGTCAGGCACGAAACCCCACTTTCAGGGTCTaGCCGGCACTCACGGGACTCCAGACTGGTGGAGCG +
Preference number: 6 (lower is better)
Translates to: TRGQARNPTFRV*PALTGLQTGGA
Trigger: CGCTCCACCAGTCTGGAGTCCCGTGAGTGCCGGTCAGACCCTGAAAGTGGGGTTTCGTGCCTGACCACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GTTGTTTCGAGCTTTCTAGAGGGCATGGTGCTAACCTaGCGGCTGGTGGCCAGAGGCCTCAGGGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VVSSFLEGMVLT*RLVARGLRGLW
Trigger: CCAGAGCCCCCTGAGGCCTCTGGCCACCAGCCGGCAGGTTAGCACCATGCCCTCTAGAAAGCTCGAAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GCTTGCAGTCACAGCTGCGTCTCTGTTCGCGAGACATaGCAGGTCCCTGCTGCACAGGGCTACTGCGGAGCT +
Preference number: 6 (lower is better)
Translates to: ACSHSCVSVRET*QVPAAQGYCGA
Trigger: AGCTCCGCAGTAGCCCTGTGCAGCAGGGACCTGGCATGTCTCGCGAACAGAGACGCAGCTGTGACTGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CAGACGGGCAGCCAGGAAGCCATCAGGGAGGCCATATaGATGGGCCCGCAGGGCATTGATCTTAGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QTGSQEAIREAI*MGPQGIDLSQA
Trigger: AGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGGCTTCCTGGCTGCCCGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GCTACTGCGGAGCTGGCAGCTGCAGCGGCCAGGTGCTaGAGGTTGAAGATACTCTGTGCCTGGAAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: ATAELAAAAARC*RLKILCAWKFP
Trigger: GGGGAACTTCCAGGCACAGAGTATCTTCAACCTCCAGCACCTGGCCGCTGCAGCTGCCAGCTCCGCAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GCCAGGAAGCCATCAGGGAGGCCATATGCATGGGCCCGCAGGGCATaGATCTTAGCCAGGCTCCCCTCAAAGGTGGATACCCGAAGGTCG +
Preference number: 6 (lower is better)
Translates to: ARKPSGRPYAWARRA*ILARLPSKVDTRRS
Trigger: CGACCTTCGGGTATCCACCTTTGAGGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGGCTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GCCTCAGGGCTGGCCACACACTGCCGCAAGACTGTTAGCAGCTCATaGGTGTCCAGACGGGCAGCCAGGAAGCCATCAGGGAGGCCATAT +
Preference number: 6 (lower is better)
Translates to: ASGLATHCRKTVSSS*VSRRAARKPSGRPY
Trigger: ATATGGCCTCCCTGATGGCTTCCTGGCTGCCCGTCTGGACACCAATGAGCTGCTAACAGTCTTGCGGCAGTGTGTGGCCAGCCCTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AGGCAACATTCCCAGGGGTGGGTGTGGGTAGACATCTaGGGTCAGCGAGACCGTGTCACCCTGGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: RQHSQGWVWVDI*GQRDRVTLVQL
Trigger: GAGCTGGACCAGGGTGACACGGTCTCGCTGACCTCAGATGTCTACCCACACCCACCCCTGGGAATGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp AGGGCTACTGCGGAGCTGGCAGCTGCAGCGGCCAGGTaGTGGAGGTTGAAGATACTCTGTGCCTGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: RATAELAAAAAR*WRLKILCAWKF
Trigger: GAACTTCCAGGCACAGAGTATCTTCAACCTCCAGCACCTGGCCGCTGCAGCTGCCAGCTCCGCAGTAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp AGCACAATCAGACCTGCAGTCTGTGGGGGTGGTGGGTaGGGTCCATCCTCTGAAGCAGCCAGCGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: STIRPAVCGGGG*GPSSEAASASR
Trigger: TCTGGAAGCGCTGGCTGCTTCAGAGGATGGACCCCACCCACCACCCCCACAGACTGCAGGTCTGATTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CTGGCCACACACTGCCGCAAGACTGTTAGCAGCTCATaGGTGTCCAGACGGGCAGCCAGGAAGCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: LATHCRKTVSSS*VSRRAARKPSG
Trigger: CCCTGATGGCTTCCTGGCTGCCCGTCTGGACACCAATGAGCTGCTAACAGTCTTGCGGCAGTGTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp ACGCTCTGCTTGTTTGGGGGAGGTTTAGCACCCTCTGGCCCACCCTaGCCTGCCACCTCCCCAGTAGCTTGCTTTCCCATGGAGTCTCGA +
Preference number: 6 (lower is better)
Translates to: TLCLFGGGLAPSGPP*PATSPVACFPMESR
Trigger: TCGAGACTCCATGGGAAAGCAAGCTACTGGGGAGGTGGCAGGCAAGGGTGGGCCAGAGGGTGCTAAACCTCCCCCAAACAAGCAGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TGGCAGCGGTTGCTGCTGCTGCTGCTGTTGTTGCTGTTGCTGCTGTaGCAGCTGCTGCTGCTGGTTAAGGTTCCGGGCTGTGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: WQRLLLLLLLLLLLL*QLLLLVKVPGCGLL
Trigger: GAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACCGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GGTCCATCCTCTGAAGCAGCCAGCGCTTCCAGAGCCTaGAGAGTAGACACAAGAGCGTCATCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GPSSEAASASRA*RVDTRASSSSW
Trigger: CCAGGAGCTGGATGACGCTCTTGTGTCTACTCTGCAGGCTCTGGAAGCGCTGGCTGCTTCAGAGGATGGACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GTCGGCAGTACCCCGCAATCAGGCAGGCAAAGTTGGTaGCTTCAGGCCACTCCATCAACAGCACCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VGSTPQSGRQSW*LQATPSTAPEA
Trigger: AGCCTCTGGTGCTGTTGATGGAGTGGCCTGAAGCCACCAACTTTGCCTGCCTGATTGCGGGGTACTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CCCTGTTGGACGGTGTTGCCAAGGCTGTGCCAGGAGTaGCTAGACTCTTACTGTGTACCACCTGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PCWTVLPRLCQE*LDSYCVPPAAG
Trigger: CCCTGCAGCAGGTGGTACACAGTAAGAGTCTAGCCACTCCTGGCACAGCCTTGGCAACACCGTCCAACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp AGGAGGGAAGCTTTGAACAGGAAACCTGTCCTCCGGTaGGGAAAGGTGGAGGTTGTCAGCCCTGCTGCCCGT +
Preference number: 6 (lower is better)
Translates to: RREALNRKPVLR*GKVEVVSPAAR
Trigger: ACGGGCAGCAGGGCTGACAACCTCCACCTTTCCCCACCGGAGGACAGGTTTCCTGTTCAAAGCTTCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TGGGATCTCCCAAACACTCACCCCCTGAGGCACACGTaGTCAGGCACGAAACCCCACTTTCAGGGTCTGACC +
Preference number: 6 (lower is better)
Translates to: WDLPNTHPLRHT*SGTKPHFQGLT
Trigger: GGTCAGACCCTGAAAGTGGGGTTTCGTGCCTGACCACGTGTGCCTCAGGGGGTGAGTGTTTGGGAGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTGCTGCTaGTTAAGGTTCCGGGCTGTGGACTCCTCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCSCCC*LRFRAVDSSAA
Trigger: CGCCGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CGGGACTCCAGACTGGTGGAGCGGATGCGTTGGACATaGATGGGACTATTAAGGCTCAAGCCTGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: RDSRLVERMRWT*MGLLRLKPGPA
Trigger: GGCTGGCCCAGGCTTGAGCCTTAATAGTCCCATCAATGTCCAACGCATCCGCTCCACCAGTCTGGAGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CCATCAGGGAGGCCATATGCATGGGCCCGCAGGGCATaGATCTTAGCCAGGCTCCCCTCAAAGGTGGATACC +
Preference number: 6 (lower is better)
Translates to: PSGRPYAWARRA*ILARLPSKVDT
Trigger: GGTATCCACCTTTGAGGGGAGCCTGGCTAAGATCAATGCCCTGCGGGCCCATGCATATGGCCTCCCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GAATCCAGCAGAAGTCGGCAGTACCCCGCAATCAGGCAGGCAAAGTaGGTGGCTTCAGGCCACTCCATCAACAGCACCAGAGGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ESSRSRQYPAIRQAK*VASGHSINSTRGLA
Trigger: TGCCAAGCCTCTGGTGCTGTTGATGGAGTGGCCTGAAGCCACCAACTTTGCCTGCCTGATTGCGGGGTACTGCCGACTTCTGCTGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AAGGCAGGTCCTTTCGGGCCAGGAGGCTGTCCTTGTTaGGGTGCTGGGCCAGGAAGTAGGTGGTGTTTTGGT +
Preference number: 6 (lower is better)
Translates to: KAGPFGPGGCPC*GAGPGSRWCFG
Trigger: ACCAAAACACCACCTACTTCCTGGCCCAGCACCTCAACAAGGACAGCCTCCTGGCCCGAAAGGACCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AGCACCTGGAAGCTGCCTGTGATGGCTGCCAGCATATaGGTTGGACTCTTGTCCACATTGGCTACCCGGCGG +
Preference number: 6 (lower is better)
Translates to: STWKLPVMAASI*VGLLSTLATRR
Trigger: CCGCCGGGTAGCCAATGTGGACAAGAGTCCAACTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTGCTaGTGGTTAAGGTTCCGGGCTGTGGACTCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCSCC*WLRFRAVDSSA
Trigger: CGCTGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TGCTGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTaGTGCTGCTGGTTAAGGTTCCGGGCTGTGGACTCC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCS*CCWLRFRAVDS
Trigger: GGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CAAGCTTGTACTCAGAAATCTGAGAGACGTAGGGCTTaGGAGCACGAGCCTCAGGGCTGGCCACACACTGCC +
Preference number: 6 (lower is better)
Translates to: QACTQKSERRRA*EHEPQGWPHTA
Trigger: GGCAGTGTGTGGCCAGCCCTGAGGCTCGTGCTCCCAAGCCCTACGTCTCTCAGATTTCTGAGTACAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CGGGCCACTCCTTGGTTCTCCCGGAACAGCTGGATCTaGCTGATCTTGCTGAACTCGGACAGCACAGTGGTG +
Preference number: 6 (lower is better)
Translates to: RATPWFSRNSWI*LILLNSDSTVV
Trigger: CACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GTCTCCACTCGGGCCACTCCTTGGTTCTCCCGGAACAGCTGGATCTaGCTGATCTTGCTGAACTCGGACAGCACAGTGGTGAGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: VSTRATPWFSRNSWI*LILLNSDSTVVRLV
Trigger: AACCAACCTCACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CAGAGGCTTGGCATCCATGATGCTGGTCTCCACTCGGGCCACTCCTaGGTTCTCCCGGAACAGCTGGATCTTGCTGATCTTGCTGAACTC +
Preference number: 6 (lower is better)
Translates to: QRLGIHDAGLHSGHS*VLPEQLDLADLAEL
Trigger: GAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGACCAGCATCATGGATGCCAAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TCTTCCTCACTTCCCGGTGGTGGGAGGGACATTAAGTCTACCATATaGTCCCGAGAGGAACCAGGCCTCCCACCTTTTCGAGGCCCCATC +
Preference number: 6 (lower is better)
Translates to: SSSLPGGGRDIKSTI*SREEPGLPPFRGPI
Trigger: GATGGGGCCTCGAAAAGGTGGGAGGCCTGGTTCCTCTCGGGACAATATGGTAGACTTAATGTCCCTCCCACCACCGGGAAGTGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp GAGTATGGTCTGTCTCCCTGTACCTGGACTTCTGACTaGGGTATCTTTCTCCGAGCGCCAGTCGGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EYGLSPCTWTSD*GIFLRAPVGAG
Trigger: TCCTGCCCCGACTGGCGCTCGGAGAAAGATACCTCAGTCAGAAGTCCAGGTACAGGGAGACAGACCATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CCAGGAGTGGCTAGACTCTTACTGTGTACCACCTGCTaGAGGGCAGCTGAGATTATGGCTGGGGTCACGTTG +
Preference number: 6 (lower is better)
Translates to: PGVARLLLCTTC*RAAEIMAGVTL
Trigger: CAACGTGACCCCAGCCATAATCTCAGCTGCCCTGCAGCAGGTGGTACACAGTAAGAGTCTAGCCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GAGGCTGCTCAGCACCTGGAAGCTGCCTGTGATGGCTaGCAGCATATGAGTTGGACTCTTGTCCACATTGGC +
Preference number: 6 (lower is better)
Translates to: EAAQHLEAACDG*QHMSWTLVHIG
Trigger: GCCAATGTGGACAAGAGTCCAACTCATATGCTGGCAGCCATCACAGGCAGCTTCCAGGTGCTGAGCAGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TGCTGCTGTTGTTGCTGTTGCTGCTGTTGCAGCTGCTaGTGCTGGTTAAGGTTCCGGGCTGTGGACTCCTCA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCSC*CWLRFRAVDSS
Trigger: TGAGGAGTCCACAGCCCGGAACCTTAACCAGCAGCAGCAGCTGCAACAGCAGCAACAGCAACAACAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TCCACTCGGGCCACTCCTTGGTTCTCCCGGAACAGCTaGATCTTGCTGATCTTGCTGAACTCGGACAGCACA +
Preference number: 6 (lower is better)
Translates to: STRATPWFSRNS*ILLILLNSDST
Trigger: TGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GCATCCATGATGCTGGTCTCCACTCGGGCCACTCCTTaGTTCTCCCGGAACAGCTGGATCTTGCTGATCTTG +
Preference number: 6 (lower is better)
Translates to: ASMMLVSTRATP*FSRNSWILLIL
Trigger: CAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGACCAGCATCATGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GCGGTGGGCACTGTGCATGTGATCTGCCTTTATCATTaGAGGTGGAAGAGGCTGGCTAGCAGGCCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: AVGTVHVICLYH*RWKRLASRPGE
Trigger: TTCTCCAGGCCTGCTAGCCAGCCTCTTCCACCTCCAATGATAAAGGCAGATCACATGCACAGTGCCCACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CTTCAGCCCCAAGGGAATTGTCCAAAGTATAGGACCTaGCCCTGCTGGCACAAGGCTCATGGTCTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LQPQGNCPKYRT*PCWHKAHGLGW
Trigger: CCAGCCTAGACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCTATACTTTGGACAATTCCCTTGGGGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CACTCACGGGACTCCAGACTGGTGGAGCGGATGCGTTaGACATTGATGGGACTATTAAGGCTCAAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: HSRDSRLVERMR*TLMGLLRLKPG
Trigger: CCCAGGCTTGAGCCTTAATAGTCCCATCAATGTCCAACGCATCCGCTCCACCAGTCTGGAGTCCCGTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp ATACCTCCTCTGGCAGTGAAAACACAGCCATTTGCCTaGGGCCTTTGCTCTCAGGGGCCACTTGGACGTAGG +
Preference number: 6 (lower is better)
Translates to: IPPLAVKTQPFA*GLCSQGPLGRR
Trigger: CCTACGTCCAAGTGGCCCCTGAGAGCAAAGGCCCCAGGCAAATGGCTGTGTTTTCACTGCCAGAGGAGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GGCATCCATGATGCTGGTCTCCACTCGGGCCACTCCTaGGTTCTCCCGGAACAGCTGGATCTTGCTGATCTT +
Preference number: 6 (lower is better)
Translates to: GIHDAGLHSGHS*VLPEQLDLADL
Trigger: AAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCGAGTGGAGACCAGCATCATGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp AGAAGTCGGCAGTACCCCGCAATCAGGCAGGCAAAGTaGGTGGCTTCAGGCCACTCCATCAACAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: RSRQYPAIRQAK*VASGHSINSTR
Trigger: TCTGGTGCTGTTGATGGAGTGGCCTGAAGCCACCAACTTTGCCTGCCTGATTGCGGGGTACTGCCGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GCACTCACGGGACTCCAGACTGGTGGAGCGGATGCGTaGGACATTGATGGGACTATTAAGGCTCAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: ALTGLQTGGADA*DIDGTIKAQAW
Trigger: CCAGGCTTGAGCCTTAATAGTCCCATCAATGTCCAACGCATCCGCTCCACCAGTCTGGAGTCCCGTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GGACCCAAGCCTACTGGGAAGCCTGACTCTATCTCCTaGACCTCTCTAGGCAACATTCCCAGGGGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: GPKPTGKPDSIS*TSLGNIPRGGC
Trigger: ACACCCACCCCTGGGAATGTTGCCTAGAGAGGTCAAGGAGATAGAGTCAGGCTTCCCAGTAGGCTTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CAGGGGCCACTTGGACGTAGGAGGGCTCTCCTAGAGTaGGTGACTCTGCACACTTGCTTTTTGGACCCAAGC +
Preference number: 6 (lower is better)
Translates to: QGPLGRRRALLE*VTLHTCFLDPS
Trigger: GCTTGGGTCCAAAAAGCAAGTGTGCAGAGTCACCAACTCTAGGAGAGCCCTCCTACGTCCAAGTGGCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CGGGCCACTCCTTGGTTCTCCCGGAACAGCTGGATCTTGCTGATCTaGCTGAACTCGGACAGCACAGTGGTGAGGTTGGTTTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: RATPWFSRNSWILLI*LNSDSTVVRLVLRS
Trigger: TGACCTCAAAACCAACCTCACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGGAGTGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CTTTGCTCTCAGGGGCCACTTGGACGTAGGAGGGCTCTCCTAGAGTaGGTGACTCTGCACACTTGCTTTTTGGACCCAAGCCTACTGGGA +
Preference number: 6 (lower is better)
Translates to: LCSQGPLGRRRALLE*VTLHTCFLDPSLLG
Trigger: TCCCAGTAGGCTTGGGTCCAAAAAGCAAGTGTGCAGAGTCACCAACTCTAGGAGAGCCCTCCTACGTCCAAGTGGCCCCTGAGAGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp CCAGCCACGAAGCCAAAGCCATATATAGGGTCTCGGTaGATGGTCACTTGTCGCAGTGTCTCTGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PATKPKPYIGSR*MVTCRSVSAGS
Trigger: GCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATATGGCTTTGGCTTCGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp TGGTTTCATGGCCCGAGTCCAGCGATGACTCAGGAGTaGTTGTGGCCAGCACAATCAGACCTGCAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: WFHGPSPAMTQE*LWPAQSDLQSV
Trigger: CACAGACTGCAGGTCTGATTGTGCTGGCCACAATCACTCCTGAGTCATCGCTGGACTCGGGCCATGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp TTTCCTGTAGTTGGGATCTCCCAAACACTCACCCCCTaGGGCACACGTGGTCAGGCACGAAACCCCACTTTC +
Preference number: 6 (lower is better)
Translates to: FPVVGISQTLTP*GTRGQARNPTF
Trigger: GAAAGTGGGGTTTCGTGCCTGACCACGTGTGCCTCAGGGGGTGAGTGTTTGGGAGATCCCAACTACAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AGGTCAGCGAGACCGTGTCACCCTGGTCCAGCTCACTaGTACTGTAGTGGCGCATCAGTTTCCTGTAGTTGG +
Preference number: 6 (lower is better)
Translates to: RSARPCHPGPAH*YCSGASVSCSW
Trigger: CCAACTACAGGAAACTGATGCGCCACTACAGTATCAGTGAGCTGGACCAGGGTGACACGGTCTCGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GCTTCACTCACGTCCTCCTCATTAATAGCCACAATCTaGTCACCAGCCAGGAGCTTGTCCTCAGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: ASLTSSSLIATI*SPARSLSSEGP
Trigger: AGGCCCCTCTGAGGACAAGCTCCTGGCTGGTGACCAGATTGTGGCTATTAATGAGGAGGACGTGAGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CAAGGGAATTGTCCAAAGTATAGGACCTGGCCCTGCTaGCACAAGGCTCATGGTCTAGGCTGGCTGCGTCAA +
Preference number: 6 (lower is better)
Translates to: QGNCPKYRTWPC*HKAHGLGWLRQ
Trigger: TTGACGCAGCCAGCCTAGACCATGAGCCTTGTGCCAGCAGGGCCAGGTCCTATACTTTGGACAATTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CTTCCCGGTGGTGGGAGGGACATTAAGTCTACCATATaGTCCCGAGAGGAACCAGGCCTCCCACCTTTTCGA +
Preference number: 6 (lower is better)
Translates to: LPGGGRDIKSTI*SREEPGLPPFR
Trigger: TCGAAAAGGTGGGAGGCCTGGTTCCTCTCGGGACAATATGGTAGACTTAATGTCCCTCCCACCACCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CAGGAGCCCACGCAGGTGACGTCCTTGCTCCTGACTTaGAACAGCTCTGCGCTTGGGATCATCTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: QEPTQVTSLLLT*NSSALGIIFIR
Trigger: TCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTGGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GGGTCCAGGATAAGCTTAGGGCTCAGCCTGACTTCCTaGGGCAGGTTTTCCCTAAGCTCTGAGACCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GSRISLGLSLTS*GRFSLSSETCS
Trigger: AGAGCAGGTCTCAGAGCTTAGGGAAAACCTGCCCAAGGAAGTCAGGCTGAGCCCTAAGCTTATCCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp ACATTGGCTACCCGGCGGCAGGAGGCCCGAAGCTCCTaGAACTTGAGAGCTAGCTCAAGCTTGTACTCAGAA +
Preference number: 6 (lower is better)
Translates to: TLATRRQEARSS*NLRASSSLYSE
Trigger: TTCTGAGTACAAGCTTGAGCTAGCTCTCAAGTTCAAGGAGCTTCGGGCCTCCTGCCGCCGGGTAGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GCCCTTGGTGCTGCTAGAAGGATGCATTTGGTGGGCCTTCAGCTGTaGAGAGAGCGACTTCCGAAGGTTCTTCTCTTTGATGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: ALGAARRMHLVGLQL*RERLPKVLLFDALQ
Trigger: CTGCAGGGCATCAAAGAGAAGAACCTTCGGAAGTCGCTCTCTCAACAGCTGAAGGCCCACCAAATGCATCCTTCTAGCAGCACCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CGTGTGGTCTCTGGAGCACCCGGGCTCATTTTAAACTTCAGATTCTaGCTGACACTGCTGCTCATCACGCTCACCTCTGGCCTGCTCATG +
Preference number: 6 (lower is better)
Translates to: RVVSGAPGLILNFRF*LTLLLITLTSGLLM
Trigger: CATGAGCAGGCCAGAGGTGAGCGTGATGAGCAGCAGTGTCAGCAAGAATCTGAAGTTTAAAATGAGCCCGGGTGCTCCAGAGACCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TCTTCAAGCTTGCTGCTTTTGGATAAGCTCTCCAGCTaGCCTTTGTCCCCCTGGCCAGAAACTACGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SSSLLLLDKLSS*PLSPWPETTLC
Trigger: GCAGAGCGTAGTTTCTGGCCAGGGGGACAAAGGGCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp AGCCAGCTCGGGGAACCAAGCTGGTCTCTTCAAGCTTaGTGCTTTTGGATAAGCTCTCCAGCTGCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: SQLGEPSWSLQA*CFWISSPAALC
Trigger: ACAAAGGGCAGCTGGAGAGCTTATCCAAAAGCAGCAAGCTTGAAGAGACCAGCTTGGTTCCCCGAGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GGCACTGTGCATGTGATCTGCCTTTATCATTGGAGGTaGAAGAGGCTGGCTAGCAGGCCTGGAGAAGACCAT +
Preference number: 6 (lower is better)
Translates to: GTVHVICLYHWR*KRLASRPGEDH
Trigger: ATGGTCTTCTCCAGGCCTGCTAGCCAGCCTCTTCCACCTCCAATGATAAAGGCAGATCACATGCACAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GGATCACCTCGTAACCTTGGCCAGAGCTTTTGGATGTaGGGTCAGATTTGGTCCGGGGTCTGGTTTCTTCGA +
Preference number: 6 (lower is better)
Translates to: GSPRNLGQSFWM*GQIWSGVWFLR
Trigger: TCGAAGAAACCAGACCCCGGACCAAATCTGACCCCACATCCAAAAGCTCTGGCCAAGGTTACGAGGTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GGGGCCCAGCTGCTGCTGAGAATTCCGTGTGGTCTCTaGAGCACCCGGGCTCATTTTAAACTTCAGATTCTT +
Preference number: 6 (lower is better)
Translates to: GAQLLLRIPCGL*STRAHFKLQIL
Trigger: AAGAATCTGAAGTTTAAAATGAGCCCGGGTGCTCCAGAGACCACACGGAATTCTCAGCAGCAGCTGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GCAGAGCCATGGGATAGCCAGCTCGGGGAACCAAGCTaGTCTCTTCAAGCTTGCTGCTTTTGGATAAGCTCT +
Preference number: 6 (lower is better)
Translates to: AEPWDSQLGEPS*SLQACCFWISS
Trigger: AGAGCTTATCCAAAAGCAGCAAGCTTGAAGAGACCAGCTTGGTTCCCCGAGCTGGCTATCCCATGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CCTTGGTTCTCCCGGAACAGCTGGATCTTGCTGATCTaGCTGAACTCGGACAGCACAGTGGTGAGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: PWFSRNSWILLI*LNSDSTVVRLV
Trigger: AACCAACCTCACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp AATCTCATCATACAGGAGCCCACGCAGGTGACGTCCTaGCTCCTGACTTTGAACAGCTCTGCGCTTGGGATC +
Preference number: 6 (lower is better)
Translates to: NLIIQEPTQVTS*LLTLNSSALGI
Trigger: GATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTGGGCTCCTGTATGATGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp TTCTTCTGGCGGGTAGGGAAGGTGGCAGAAAATAAGTaGCGTAGTCTGAAAGGCCCTCGGGATGACTTGGGC +
Preference number: 6 (lower is better)
Translates to: FFWRVGKVAENK*RSLKGPRDDLG
Trigger: GCCCAAGTCATCCCGAGGGCCTTTCAGACTACGCAACTTATTTTCTGCCACCTTCCCTACCCGCCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CTCATCATACAGGAGCCCACGCAGGTGACGTCCTTGCTCCTGACTTaGAACAGCTCTGCGCTTGGGATCATCTTCATCAGAGCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: LIIQEPTQVTSLLLT*NSSALGIIFIRAVV
Trigger: GACAACAGCTCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTGGGCTCCTGTATGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TTGCCTTTTGGGTCCAGGATAAGCTTAGGGCTCAGCCTGACTTCCTaGGGCAGGTTTTCCCTAAGCTCTGAGACCTGCTCTTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: LPFGSRISLGLSLTS*GRFSLSSETCSSLR
Trigger: CCTCAGTGAAGAGCAGGTCTCAGAGCTTAGGGAAAACCTGCCCAAGGAAGTCAGGCTGAGCCCTAAGCTTATCCTGGACCCAAAAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TCTGTCTCTTTCTTCTGGCGGGTAGGGAAGGTGGCAGAAAATAAGTaGCGTAGTCTGAAAGGCCCTCGGGATGACTTGGGCTTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: SVSFFWRVGKVAENK*RSLKGPRDDLGFVG
Trigger: CCCCACAAAGCCCAAGTCATCCCGAGGGCCTTTCAGACTACGCAACTTATTTTCTGCCACCTTCCCTACCCGCCAGAAGAAAGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AGAGTAGACACAAGAGCGTCATCCAGCTCCTGGGCGTaGTCTCGTACTGTCCGAGTCTGTACACTGTCAATG +
Preference number: 6 (lower is better)
Translates to: RVDTRASSSSWA*SRTVRVCTLSM
Trigger: CATTGACAGTGTACAGACTCGGACAGTACGAGATCACGCCCAGGAGCTGGATGACGCTCTTGTGTCTACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GACCTTCACGGGATTGGACCTCAGCTTGGCCTTCTTTaGAGCACTGATGAAGGCAGATTTAGGGGACTGATG +
Preference number: 6 (lower is better)
Translates to: DLHGIGPQLGLL*STDEGRFRGLM
Trigger: CATCAGTCCCCTAAATCTGCCTTCATCAGTGCTGCAAAGAAGGCCAAGCTGAGGTCCAATCCCGTGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CGGCAGTTCATTCAAAATGCGAAGGTACTGGAGCTTTaGTTGAATGGCGGAGCCCTTGGTGCTGCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: RQFIQNAKVLEL*LNGGALGAARR
Trigger: CCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GCAGGTGACGTCCTTGCTCCTGACTTTGAACAGCTCTaGGCTTGGGATCATCTTCATCAGAGCTGTTGTCTC +
Preference number: 6 (lower is better)
Translates to: AGDVLAPDFEQL*AWDHLHQSCCL
Trigger: GAGACAACAGCTCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp CTTTGCCATCGCTGGCATCATCTGCCATGTCGCACTTaGGGTAGTAGAAGCAGTAGCGAATGGAACAGCACT +
Preference number: 6 (lower is better)
Translates to: LCHRWHHLPCRT*GSRSSSEWNST
Trigger: AGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CAGCAGGATCCCGACGTAGCAGCTCCACTGGGTCCTTaGGAAAGAAGCTTATTCGGAAGAGGCATTTCATTC +
Preference number: 6 (lower is better)
Translates to: QQDPDVAAPLGP*ERSLFGRGISF
Trigger: GAATGAAATGCCTCTTCCGAATAAGCTTCTTTCCCAAGGACCCAGTGGAGCTGCTACGTCGGGATCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TGCAGCTGGGCTTGTCGCTCATCTGTCTCTTTCTTCTaGCGGGTAGGGAAGGTGGCAGAAAATAAGTTGCGT +
Preference number: 6 (lower is better)
Translates to: CSWACRSSVSFF*RVGKVAENKLR
Trigger: ACGCAACTTATTTTCTGCCACCTTCCCTACCCGCCAGAAGAAAGAGACAGATGAGCGACAAGCCCAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GCAGCAGGATCCCGACGTAGCAGCTCCACTGGGTCCTaGGGAAAGAAGCTTATTCGGAAGAGGCATTTCATT +
Preference number: 6 (lower is better)
Translates to: AAGSRRSSSTGS*GKKLIRKRHFI
Trigger: AATGAAATGCCTCTTCCGAATAAGCTTCTTTCCCAAGGACCCAGTGGAGCTGCTACGTCGGGATCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TGTTACCGGAATCTCATCATACAGGAGCCCACGCAGGTGACGTCCTaGCTCCTGACTTTGAACAGCTCTGCGCTTGGGATCATCTTCATC +
Preference number: 6 (lower is better)
Translates to: CYRNLIIQEPTQVTS*LLTLNSSALGIIFI
Trigger: GATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTCACCTGCGTGGGCTCCTGTATGATGAGATTCCGGTAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GAAGGTCGGCAGTTCATTCAAAATGCGAAGGTACTGGAGCTTTGCTaGAATGGCGGAGCCCTTGGTGCTGCTAGAAGGATGCATTTGGTG +
Preference number: 6 (lower is better)
Translates to: EGRQFIQNAKVLELC*NGGALGAARRMHLV
Trigger: CACCAAATGCATCCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACTGCCGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GTGCTGGAGGTTGAAGATACTCTGTGCCTGGAAGTTCCCCCTGGCTaGGTGGCTTTAGAAGTTCCTCAAGGAACTCCAGTTCATACTGCT +
Preference number: 6 (lower is better)
Translates to: VLEVEDTLCLEVPPG*VALEVPQGTPVHTA
Trigger: AGCAGTATGAACTGGAGTTCCTTGAGGAACTTCTAAAGCCACCAAGCCAGGGGGAACTTCCAGGCACAGAGTATCTTCAACCTCCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp CCACCTGCTCATCCAACTTCATGCCAGGCAGAATCTTCATGGGGATaGAATAGGAGAGCTCATCTTTGCCATCGCTGGCATCATCTGCCA +
Preference number: 6 (lower is better)
Translates to: PPAHPTSCQAESSWG*NRRAHLCHRWHHLP
Trigger: TGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGATGAGCAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp AGGGTCTCGGTGAATGGTCACTTGTCGCAGTGTCTCTaGTGGCAGCTGTACACATTCCATATCATTTGCGCT +
Preference number: 6 (lower is better)
Translates to: RVSVNGHLSQCL*WQLYTFHIICA
Trigger: AGCGCAAATGATATGGAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TGTTCTGGCCCAGTATACTCAAGCACAAGAGCAAAGTaGTCAATGGACCTCAGGGAGAGTCGGTCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: CSGPVYSSTRAK*SMDLRESRSCR
Trigger: TCTACAGGACCGACTCTCCCTGAGGTCCATTGAGCACTTTGCTCTTGTGCTTGAGTATACTGGGCCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GGTAGTAGAAGCAGTAGCGAATGGAACAGCACTTGCTaGTTTCGCTATCTTCATCCAGATCAGCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GSRSSSEWNSTC*FRYLHPDQLAS
Trigger: GGAGGCCAGCTGATCTGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GTCTCGGTGAATGGTCACTTGTCGCAGTGTCTCTGCTaGCAGCTGTACACATTCCATATCATTTGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: VSVNGHLSQCLC*QLYTFHIICAL
Trigger: GAGAGCGCAAATGATATGGAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp GACGTCCTTGCTCCTGACTTTGAACAGCTCTGCGCTTaGGATCATCTTCATCAGAGCTGTTGTCTCGGAAAC +
Preference number: 6 (lower is better)
Translates to: DVLAPDFEQLCA*DHLHQSCCLGN
Trigger: GTTTCCGAGACAACAGCTCTGATGAAGATGATCCCAAGCGCAGAGCTGTTCAAAGTCAGGAGCAAGGACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TGGGGATTGAATAGGAGAGCTCATCTTTGCCATCGCTaGCATCATCTGCCATGTCGCACTTGCGGTAGTAGA +
Preference number: 6 (lower is better)
Translates to: WGLNRRAHLCHR*HHLPCRTCGSR
Trigger: TCTACTACCGCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GCCAAAGCCATATATAGGGTCTCGGTGAATGGTCACTaGTCGCAGTGTCTCTGCTGGCAGCTGTACACATTC +
Preference number: 6 (lower is better)
Translates to: AKAIYRVSVNGH*SQCLCWQLYTF
Trigger: GAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATATGGCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GTGGTGGCTGAGTGCTTCTCGTCCAGGCCTACAGTGTaGAATAAAACACCAGTGAAGGTCGGCAGTTCATTC +
Preference number: 6 (lower is better)
Translates to: VVAECFSSRPTV*NKTPVKVGSSF
Trigger: GAATGAACTGCCGACCTTCACTGGTGTTTTATTCAACACTGTAGGCCTGGACGAGAAGCACTCAGCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GCTCTCCTAGAGTTGGTGACTCTGCACACTTGCTTTTaGGACCCAAGCCTACTGGGAAGCCTGACTCTATCT +
Preference number: 6 (lower is better)
Translates to: ALLELVTLHTCF*DPSLLGSLTLS
Trigger: AGATAGAGTCAGGCTTCCCAGTAGGCTTGGGTCCAAAAAGCAAGTGTGCAGAGTCACCAACTCTAGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp ACCAGCAGAGTGGTGGCTGAGTGCTTCTCGTCCAGGCCTACAGTGTaGAATAAAACACCAGTGAAGGTCGGCAGTTCATTCAAAATGCGA +
Preference number: 6 (lower is better)
Translates to: TSRVVAECFSSRPTV*NKTPVKVGSSFKMR
Trigger: TCGCATTTTGAATGAACTGCCGACCTTCACTGGTGTTTTATTCAACACTGTAGGCCTGGACGAGAAGCACTCAGCCACCACTCTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp GATTTGGTCCGGGGTCTGGTTTCTTCGAAGAAGATTAGGTTCTCGTaGACATCCGTCCTGCTTTCTTGCTCCTTCCTTTGTTCCCGCATG +
Preference number: 6 (lower is better)
Translates to: DLVRGLVSSKKIRFS*TSVLLSCSFLCSRM
Trigger: CATGCGGGAACAAAGGAAGGAGCAAGAAAGCAGGACGGATGTCAACGAGAACCTAATCTTCTTCGAAGAAACCAGACCCCGGACCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp TTCATGGCCGACATCATCTCTGACATATCTGTGAGCTCTGAAGAGTaGGTTTCATGGCCCGAGTCCAGCGATGACTCAGGAGTGATTGTG +
Preference number: 6 (lower is better)
Translates to: FMADIISDISVSSEE*VSWPESSDDSGVIV
Trigger: CACAATCACTCCTGAGTCATCGCTGGACTCGGGCCATGAAACCAACTCTTCAGAGCTCACAGATATGTCAGAGATGATGTCGGCCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp CTGCTAGAAGGATGCATTTGGTGGGCCTTCAGCTGTTaGGAGAGCGACTTCCGAAGGTTCTTCTCTTTGATG +
Preference number: 6 (lower is better)
Translates to: LLEGCIWWAFSC*ESDFRRFFSLM
Trigger: CATCAAAGAGAAGAACCTTCGGAAGTCGCTCTCTCAACAGCTGAAGGCCCACCAAATGCATCCTTCTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp AGTTCATTCAAAATGCGAAGGTACTGGAGCTTTGCTTaGATGGCGGAGCCCTTGGTGCTGCTAGAAGGATGC +
Preference number: 6 (lower is better)
Translates to: SSFKMRRYWSFA*MAEPLVLLEGC
Trigger: GCATCCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp TCCCACCTTTTCGAGGCCCCATCTGCTCCTGGAGTTTaGCTTTGCAAGAGTCACAGTAGAAATTCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: SHLFEAPSAPGV*LCKSHSRNSGL
Trigger: AAGCCCTGAATTTCTACTGTGACTCTTGCAAAGTCAAACTCCAGGAGCAGATGGGGCCTCGAAAAGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp CGTGATCTCGTACTGTCCGAGTCTGTACACTGTCAATaGGTGTTACCGGAATCTCATCATACAGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: RDLVLSESVHCQ*VLPESHHTGAH
Trigger: GTGGGCTCCTGTATGATGAGATTCCGGTAACACTCATTGACAGTGTACAGACTCGGACAGTACGAGATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp ACACTTGCTTTTTGGACCCAAGCCTACTGGGAAGCCTaGCTCTATCTCCTTGACCTCTCTAGGCAACATTCC +
Preference number: 6 (lower is better)
Translates to: TLAFWTQAYWEA*LYLLDLSRQHS
Trigger: GGAATGTTGCCTAGAGAGGTCAAGGAGATAGAGTCAGGCTTCCCAGTAGGCTTGGGTCCAAAAAGCAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp GAATCTTCATGGGGATTGAATAGGAGAGCTCATCTTTaGCATCGCTGGCATCATCTGCCATGTCGCACTTGC +
Preference number: 6 (lower is better)
Translates to: ESSWGLNRRAHL*HRWHHLPCRTC
Trigger: GCAAGTGCGACATGGCAGATGATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp TCTGACATATCTGTGAGCTCTGAAGAGTTGGTTTCATaGCCCGAGTCCAGCGATGACTCAGGAGTGATTGTG +
Preference number: 6 (lower is better)
Translates to: SDISVSSEELVS*PESSDDSGVIV
Trigger: CACAATCACTCCTGAGTCATCGCTGGACTCGGGCCATGAAACCAACTCTTCAGAGCTCACAGATATGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CCATGTCGCACTTGCGGTAGTAGAAGCAGTAGCGAATaGAACAGCACTTGCTGCTTTCGCTATCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: PCRTCGSRSSSE*NSTCCFRYLHP
Trigger: TGGATGAAGATAGCGAAAGCAGCAAGTGCTGTTCCATTCGCTACTGCTTCTACTACCGCAAGTGCGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GCTGCTAGAAGGATGCATTTGGTGGGCCTTCAGCTGTaGAGAGAGCGACTTCCGAAGGTTCTTCTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: AARRMHLVGLQL*RERLPKVLLFD
Trigger: ATCAAAGAGAAGAACCTTCGGAAGTCGCTCTCTCAACAGCTGAAGGCCCACCAAATGCATCCTTCTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CAGTTCATTCAAAATGCGAAGGTACTGGAGCTTTGCTaGAATGGCGGAGCCCTTGGTGCTGCTAGAAGGATG +
Preference number: 6 (lower is better)
Translates to: QFIQNAKVLELC*NGGALGAARRM
Trigger: CATCCTTCTAGCAGCACCAAGGGCTCCGCCATTCAAGCAAAGCTCCAGTACCTTCGCATTTTGAATGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GACATCATCTCTGACATATCTGTGAGCTCTGAAGAGTaGGTTTCATGGCCCGAGTCCAGCGATGACTCAGGA +
Preference number: 6 (lower is better)
Translates to: DIISDISVSSEE*VSWPESSDDSG
Trigger: TCCTGAGTCATCGCTGGACTCGGGCCATGAAACCAACTCTTCAGAGCTCACAGATATGTCAGAGATGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp GTTGAAGATACTCTGTGCCTGGAAGTTCCCCCTGGCTaGGTGGCTTTAGAAGTTCCTCAAGGAACTCCAGTT +
Preference number: 6 (lower is better)
Translates to: VEDTLCLEVPPG*VALEVPQGTPV
Trigger: AACTGGAGTTCCTTGAGGAACTTCTAAAGCCACCAAGCCAGGGGGAACTTCCAGGCACAGAGTATCTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 90 bp AGCCACGAAGCCAAAGCCATATATAGGGTCTCGGTGAATGGTCACTaGTCGCAGTGTCTCTGCTGGCAGCTGTACACATTCCATATCATT +
Preference number: 6 (lower is better)
Translates to: SHEAKAIYRVSVNGH*SQCLCWQLYTFHII
Trigger: AATGATATGGAATGTGTACAGCTGCCAGCAGAGACACTGCGACAAGTGACCATTCACCGAGACCCTATATATGGCTTTGGCTTCGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp ATCCAACTTCATGCCAGGCAGAATCTTCATGGGGATTaGATAGGAGAGCTCATCTTTGCCATCGCTGGCATC +
Preference number: 6 (lower is better)
Translates to: IQLHARQNLHGD*IGELIFAIAGI
Trigger: GATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp ACAGTGGTCCGGCCATCAAATGTGAATGACTTGATCTaGCCATTTTCTAGGAAAACCTTCAGGACGTTGGGG +
Preference number: 6 (lower is better)
Translates to: TVVRPSNVNDLI*PFSRKTFRTLG
Trigger: CCCCAACGTCCTGAAGGTTTTCCTAGAAAATGGGCAGATCAAGTCATTCACATTTGATGGCCGGACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp ATAGATGTGAAGGGCAGCAAGGCCCAAAAGCATCTCTaGCTTAGGTTCCATTCCAAAGCGTTCTCGGATAAC +
Preference number: 6 (lower is better)
Translates to: IDVKGSKAQKHL*LRFHSKAFSDN
Trigger: GTTATCCGAGAACGCTTTGGAATGGAACCTAAGCCAGAGATGCTTTTGGGCCTTGCTGCCCTTCACATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CATCCAACTTCATGCCAGGCAGAATCTTCATGGGGATaGAATAGGAGAGCTCATCTTTGCCATCGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: HPTSCQAESSWG*NRRAHLCHRWH
Trigger: ATGCCAGCGATGGCAAAGATGAGCTCTCCTATTCAATCCCCATGAAGATTCTGCCTGGCATGAAGTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS TCA 72 bp GGGGTCTGGTTTCTTCGAAGAAGATTAGGTTCTCGTTaGCATCCGTCCTGCTTTCTTGCTCCTTCCTTTGTT +
Preference number: 6 (lower is better)
Translates to: GVWFLRRRLGSR*HPSCFLAPSFV
Trigger: AACAAAGGAAGGAGCAAGAAAGCAGGACGGATGTCAACGAGAACCTAATCTTCTTCGAAGAAACCAGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CCA 72 bp CTTGTCCTGGAGAATCAGGAACTTGTGATTCTGTTCTaGCCCAGTATACTCAAGCACAAGAGCAAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: LVLENQELVILF*PSILKHKSKVL
Trigger: GAGCACTTTGCTCTTGTGCTTGAGTATACTGGGCCAGAACAGAATCACAAGTTCCTGATTCTCCAGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS GCA 72 bp TTCATCATTTTTGCATCTGTTTCTCCAATTGTCACCTaGTCAGAGAATCGGACCTTCACGGGATTGGACCTC +
Preference number: 6 (lower is better)
Translates to: FIIFASVSPIVT*SENRTFTGLDL
Trigger: GAGGTCCAATCCCGTGAAGGTCCGATTCTCTGAGCAGGTGACAATTGGAGAAACAGATGCAAAAATGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp TCCTTAACAGTGGTCCGGCCATCAAATGTGAATGACTaGATCTGCCCATTTTCTAGGAAAACCTTCAGGACG +
Preference number: 6 (lower is better)
Translates to: SLTVVRPSNVND*ICPFSRKTFRT
Trigger: CGTCCTGAAGGTTTTCCTAGAAAATGGGCAGATCAAGTCATTCACATTTGATGGCCGGACCACTGTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2
CDS CAA 72 bp CTTCCTTCTTCATCATTTTTGCATCTGTTTCTCCAATaGTCACCTGCTCAGAGAATCGGACCTTCACGGGAT +
Preference number: 6 (lower is better)
Translates to: LPSSSFLHLFLQ*SPAQRIGPSRD
Trigger: ATCCCGTGAAGGTCCGATTCTCTGAGCAGGTGACAATTGGAGAAACAGATGCAAAAATGATGAAGAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208130.2