RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMPD1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035615

Ensembl transcript IDs: ENSMUST00000044773.12, ENSMUST00000107804.2, ENSMUST00000134280.8

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCGGCCACTTCCCTGTaGCGGGTGGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPATSL*RVEQRL
Trigger: TAGCCGCTGCTCCACCCGGCACAGGGAAGTGGCCGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCCTGCTGGCACCACTaGGGAGGTGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPCWHH*GGAAPC
Trigger: GCAGGGAGCTGCACCTCCCCAGTGGTGCCAGCAGGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGCAGCTCTGGGCCCTaGGAGTGTGTCTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGSSGP*ECVWWR
Trigger: ACGCCACCAGACACACTCTCAGGGCCCAGAGCTGCC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCTCACTGGCGTGAGTaGCTGGGCTGGGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGPHWRE*LGWVPG
Trigger: CCCGGGAACCCAGCCCAGGCACTCACGCCAGTGAGG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCACCACTGGGGAGGTaGAGCTCCCTGCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAPLGR*SSLPGS
Trigger: GCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGTGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACTGGCGTGAGTGCCTaGGCTGGGTTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGTGVSA*AGFPGG
Trigger: GCCACCCGGGAACCCAGCCCAGGCACTCACGCCAGT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTGGTTGCCTCAGGTGTaGGGCTGTCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLWLPQV*GCRQGA
Trigger: AGCCCCCTGGCGACAGCCCCACACCTGAGGCAACCA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGGAAAAGCTTGCCGTaGGCAGAGCCGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGKSLP*AEPPAV
Trigger: CACAGCAGGCGGCTCTGCTCACGGCAAGCTTTTCCC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGGCAGCTCTGGGCCCTaGGAGTGTGTCTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRGSSGP*ECVWWR
Trigger: ACGCCACCAGACACACTCTCAGGGCCCAGAGCTGCC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGAATACAGCGGCTGTaGGGGCCGTGCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRRIQRL*GPCTGG
Trigger: CCCGCCAGTGCACGGCCCTCACAGCCGCTGTATTCT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCACCTTCACGGGGTTaGTCTTCAGCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAPSRG*SSAGPA
Trigger: AGCGGGCCCGGCTGAAGAGCAACCCCGTGAAGGTGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCTGCCGGGAAGCTGTaGTCTCTGAGCCCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPAGKL*SLSPSH
Trigger: GTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCACCCCTCCCTGCCTaGTTGGCTCTCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSPLPA*LALLPL
Trigger: CAGAGGGAGGAGAGCCAAGCAGGCAGGGAGGGGTGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGGCTGAGCTGTCCCTaGAGCGCCGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGGLSCP*SAEATL
Trigger: CAAGGTGGCTTCGGCGCTCCAGGGACAGCTCAGCCC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGTTGCCTCAGGTGTaGGGCTGTCGCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWLPQV*GCRQGA
Trigger: AGCCCCCTGGCGACAGCCCCACACCTGAGGCAACCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCTTCCAGGGCGTCCATaGACTCACTGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLLPGRP*THWTRW
Trigger: CCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCCATCCAGCCCTGCTaGCACCACTGGGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSIQPC*HHWGGA
Trigger: TGCACCTCCCCAGTGGTGCCAGCAGGGCTGGATGGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCAACCCCAAGGCCTTaGTCTCCAGGAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLATPRP*SPGGLA
Trigger: AGCCAGGCCTCCTGGAGACCAAGGCCTTGGGGTTGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGTGAGGGCCGTGCACTaGCGGGCCAAGAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLVRAVH*RAKSFT
Trigger: CGTGAAACTCTTGGCCCGCCAGTGCACGGCCCTCAC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGAAGCTGTGCTCTCTaGGCCCGAGTCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGSCAL*ARVTQV
Trigger: CACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGCAGCAGGGTGTGTCTaGGGGTCCCCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRAAGCV*GSPSSS
Trigger: GGAAGAAGACGGGGACCCTCAGACACACCCTGCTGC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCACTGTCTGTCATGCTaGTGGCCCCGCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLHCLSC*WPRRCL
Trigger: CAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCAGCACTGTCTGTCATaGTGCTGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRQHCLS*CWPRRC
Trigger: GCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCAGCACTGTCTGTCATaGTGCTGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGQHCLS*CWPRRC
Trigger: GCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGTCTAGCCTGCCCATaGTCAGTTCTGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGLACP*SVLVPS
Trigger: GCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGGGGCTGTGAGGGATaGTGGCTGAGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGGGCEG*WLRSHL
Trigger: CAGATGGCTCCTCAGCCAGCATCCCTCACAGCCCCC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGGCCCCGCAGGTGCTTaGACCTCTTCTGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRGPAGA*TSSGCL
Trigger: GAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCGTCCATGGACTCACTaGACCCGCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGRPWTH*TRWSCS
Trigger: GCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGCCCATGCTCAGTTCTaGTCCCCAGCTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRAHAQF*SPAAGL
Trigger: GAGGCCTGCAGCTGGGGACCAGAACTGAGCATGGGC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTGCCCTCATACAGCCTaGGGTCTAGCCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLCPHTA*GLACPC
Trigger: GCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCCCGAGTCACTCAGGTaGCTGCCTGGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRPESLR*LPGEML
Trigger: CAGCATCTCCCCAGGCAGCCACCTGAGTGACTCGGG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGCTCTCCTCCCTCTaGGCCCGGATGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWLSSL*ARMQAF
Trigger: GAAAGCCTGCATCCGGGCCCAGAGGGAGGAGAGCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGCTTCCTGCAGAGGGTaGGGAGGTAAGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRASCRG*GGKRGS
Trigger: GCTGCCCCTCTTACCTCCCCACCCTCTGCAGGAAGC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCAGAGGCCGGCCAGCTaGACCAGGTGCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGQRPAS*TRCWKV
Trigger: CACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCTTCCCTGTGCCGGGTaGAGCAGCGGCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRLPCAG*SSGYSL
Trigger: CAGACTGTAGCCGCTGCTCCACCCGGCACAGGGAAG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGTGAGGGCCGTGCACTaGCGGGCCAAGAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGVRAVH*RAKSFT
Trigger: CGTGAAACTCTTGGCCCGCCAGTGCACGGCCCTCAC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCACAAAGCTCACCCTaGAGAGGCAGCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAQSSP*RGSGSP
Trigger: AGGACTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGTGAGGGATGCTGGCTaGGGAGCCATCTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGVRDAG*GAICGD
Trigger: GTCACCACAGATGGCTCCTCAGCCAGCATCCCTCAC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGAAAAGGCCTGACTTaGGCAGCCTGTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGKGLT*AACGLE
Trigger: TTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCTCAGGCTCTGCAGTaGGTTCTTTGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGPQALQ*VLWGWC
Trigger: GCACCACCCCCAAAGAACTCACTGCAGAGCCTGAGG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCCAGGTGCTGGAAAGTaGCCCGCACAGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRPGAGK*PAQHLA
Trigger: TGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGCGGCTACAGTCTGTaGACTGGAAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSGYSL*TGSRGR
Trigger: CCGGCCTCTGCTTCCAGTTCACAGACTGTAGCCGCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCTGGATGTGCAGGGCTaGAAGCCGGAGGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRLDVQG*KPEGRV
Trigger: AACTCTGCCCTCCGGCTTGCAGCCCTGCACATCCAG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGACTCCTCCGAGTCACTaGAGGCCCTGGACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRTPPSH*RPWTRS
Trigger: GCTACGAGTCCAGGGCCTGCAGTGACTCGGAGGAGT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGTCTAGCCTGCCCATaGTCAGTTCTGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGGLACP*SVLVPS
Trigger: GCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGTAGTCAGTCCGGCTaGCCTCATACAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSSQSG*PHTAWG
Trigger: ACCCCAGGCTGTATGAGGGCAGCCGGACTGACTACT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGTCACTCAGGTGGCTaGCTGGGGAGATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSHSGG*LGRCWN
Trigger: GTTCCAGCATCTCCCCAGGCAGCCACCTGAGTGACT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCACCACTGGGGAGGTaGAGCTCCCTGCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAPLGR*SSLPGS
Trigger: GCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGTGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGGCCTGGCTCACCTTaGATGTCCTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRRPGSP*MSCRED
Trigger: GTCCTCCCTGCAGGACATGCAAGGTGAGCCAGGCCT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGGCCTGGCTCACCTTaGATGTCCTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGRPGSP*MSCRED
Trigger: GTCCTCCCTGCAGGACATGCAAGGTGAGCCAGGCCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTCCTCTGTCTCAGGCTaGAGGCCCCGGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSSVSG*RPRKHV
Trigger: CACATGCTTCCGGGGCCTGCAGCCTGAGACAGAGGA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGGTCACTTGGCTTCCTaGAGAGGGTGGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLGHLAS*RGWGGK
Trigger: CTTACCTCCCCACCCTCTGCAGGAAGCCAAGTGACC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGCCAGCTGGACCAGGTaGTGGAAAGTGACCCGCACA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRASWTR*WKVTRT
Trigger: TGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCCAGCTGGACCAGGTaGTGGAAAGTGACCCGCACA +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGASWTR*WKVTRT
Trigger: TGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGACTGGCGTGAGTGCCTaGGCTGGGTTCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWTGVSA*AGFPGG
Trigger: GCCACCCGGGAACCCAGCCCAGGCACTCACGCCAGT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCTGTTTCCAGACCAGTaGAAGACGGAGTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLLFPDQ*KTELAG
Trigger: CCCGGCCAACTCCGTCTTCCACTGGTCTGGAAACAG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCTGGCACTGAGGGTTaGCATTCTGGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSGTEG*HSGPGP
Trigger: TGGACCTGGGCCAGAATGCCAACCCTCAGTGCCAGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGACTCAGGTGGCTGCCTaGGGAGATGCTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLTQVAA*GDAGTQ
Trigger: CTGTGTTCCAGCATCTCCCCAGGCAGCCACCTGAGT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCAGGGATTCCAGCATaGAGCCAGACTGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPGIPA*SQTEPP
Trigger: TGGAGGCTCAGTCTGGCTCCATGCTGGAATCCCTGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGTGGAGCCTTCGGGATaGCTCTCTGGGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRVEPSG*LSGAKH
Trigger: GTGCTTTGCCCCAGAGAGCCATCCCGAAGGCTCCAC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGTGCCTCACTGGCGTaGGTGCCTGGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWCASLA*VPGLGS
Trigger: GGAACCCAGCCCAGGCACTCACGCCAGTGAGGCACA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCTCTCTGTGTTGGCTaGGTCCGATGCCTCCGATTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGALCVG*VRCLRF
Trigger: GAATCGGAGGCATCGGACTCAGCCAACACAGAGAGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCTATCTTCTGGCACTaGGGGTTGGCATTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSIFWH*GLAFWP
Trigger: GGGCCAGAATGCCAACCCTCAGTGCCAGAAGATAGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGCCTCTCTCACAGGTaGGTTTCGCAGCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSLSHR*VSQPPQ
Trigger: TTGTGGAGGCTGCGAAACTCACCTGTGAGAGAGGCT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCCGGAGGGCAGAGTTaGACTTCATCTCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAGGQS*TSSPQQ
Trigger: TTGCTGTGGAGATGAAGTGCAACTCTGCCCTCCGGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTGTCGCCAGGGGGCTaGTCCTCTCTAGCAAATGGT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLSPGG*SSLANG
Trigger: ACCATTTGCTAGAGAGGAGCAGCCCCCTGGCGACAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGACCTCTTCTGGTTaGCTCAGGTGTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRWTSSG*LRCGAV
Trigger: GACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGATTCCTCATCTGAGCTaGCACCCTCAAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLIPHLS*HPQRPA
Trigger: CGCTGGCCTTTGAGGGTGGCAGCTCAGATGAGGAAT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCTGTCCTCAGGCTCTaGAGTGAGTTCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAVLRL*SEFFGG
Trigger: ACCCCCAAAGAACTCACTGCAGAGCCTGAGGACAGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCGGTCAAGCTGCTCTaGCTTTATTGTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAVKLL*LYCLWR
Trigger: CCGCCAGAGACAATAAAGGCAGAGCAGCTTGACCGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGATCTGCAGTGTTCTATaGCAATCTCCGCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLICSVL*QSPRAP
Trigger: TGGCGCCCGCGGAGATTGGCATAGAACACTGCAGAT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCTTCTGTGAGCCCATaGATAGCCGGCTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGASVSP*IAGSGF
Trigger: AAAGCCGGAGCCGGCTATGCATGGGCTCACAGAAGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCTGCTGTTTTCCTCTTaGCTGTTGGTCTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLLLFSS*LLVSRP
Trigger: GGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTGGCACTGAGGGTTaGCATTCTGGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSGTEG*HSGPGP
Trigger: TGGACCTGGGCCAGAATGCCAACCCTCAGTGCCAGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTCCGAAGCAAGGCCCTaGGGACCGTCTATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSEARP*GPSIFW
Trigger: CCAGAAGATAGACGGTCCCCAGGGCCTTGCTTCGGA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCGAAGCAAGGCCCTaGGGACCGTCTATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSEARP*GPSIFW
Trigger: CCAGAAGATAGACGGTCCCCAGGGCCTTGCTTCGGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACTCAGGTGGCTGCCTaGGGAGATGCTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGTQVAA*GDAGTQ
Trigger: CTGTGTTCCAGCATCTCCCCAGGCAGCCACCTGAGT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGGCTGGAAGAACCTaGGTTGGAGTGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWAGRT*VGVMGA
Trigger: AGCCCCCATCACTCCAACCCAGGTTCTTCCAGCCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTCTGCTGGTGAGCCATaGCCTGAATCTGCCGAGCGA +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSAGEP*PESAER
Trigger: TCGCTCGGCAGATTCAGGCCATGGCTCACCAGCAGA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGGCTCTCTGTGAGTTaGACAAAGCCCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGRLSVS*TKPSGA
Trigger: TGCCCCCGAGGGCTTTGTCCAACTCACAGAGAGCCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGCTGGACCAGGTGCTaGAAAGTGACCCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSWTRC*KVTRTA
Trigger: TGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGCATGGAGCCAGACTaGGCCTCCATCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSMEPD*ASIQPC
Trigger: GCAGGGCTGGATGGAGGCTCAGTCTGGCTCCATGCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCACGGGTTCTAGACTaGCTCTGCAATCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPRVLD*LCNLMA
Trigger: TGCCATGAGATTGCAGAGTCAGTCTAGAACCCGTGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCTGGCTCCATCTCCATaGTCCTGGAGGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRLAPSP*SWRLDL
Trigger: CAAATCCAGCCTCCAGGATCATGGAGATGGAGCCAG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTGGCTCCATCTCCATaGTCCTGGAGGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLAPSP*SWRLDL
Trigger: CAAATCCAGCCTCCAGGATCATGGAGATGGAGCCAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCAGCAGGGTGTGTCTaGGGGTCCCCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAAGCV*GSPSSS
Trigger: GGAAGAAGACGGGGACCCTCAGACACACCCTGCTGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCGGCTCCGGCTTTCTaGAAAATGCAAGGTGCACTT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPAPAF*KMQGAL
Trigger: AAGTGCACCTTGCATTTTTCAGAAAGCCGGAGCCGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGCCTCTCTCACAGGTaGGTTTCGCAGCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSLSHR*VSQPPQ
Trigger: TTGTGGAGGCTGCGAAACTCACCTGTGAGAGAGGCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCAGGCCAGGTCTTTTaGACTGCTGGATTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAGQVF*TAGFQQ
Trigger: TTGCTGGAATCCAGCAGTGCAAAAGACCTGGCCTGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTATTCCTCATCTGAGCTaGCACCCTCAAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGIPHLS*HPQRPA
Trigger: CGCTGGCCTTTGAGGGTGGCAGCTCAGATGAGGAAT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGTTCTTTGGGGGTGGTaGCACCTGGGTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGVLWGW*HLGLDL
Trigger: CAGATCAAGACCCAGGTGGCACCACCCCCAAAGAAC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCCTTGTACCTCATCTaGAGCCAAGGCCGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSLYLI*SQGRLF
Trigger: GAAGAGACGGCCTTGGCTGCAGATGAGGTACAAGGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGATCTGCAGTGTTCTATaGCAATCTCCGCGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRICSVL*QSPRAP
Trigger: TGGCGCCCGCGGAGATTGGCATAGAACACTGCAGAT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCTTTCTACCACCTGCTaGACCAGCTCTTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLLSTTC*TSSSSC
Trigger: GCATGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGTCACTGCAGGCCCTaGACTCGTAGCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSHCRP*TRSLLQ
Trigger: CTGAAGAAGGCTACGAGTCCAGGGCCTGCAGTGACT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCGTCCATGGACTCACTaGACCCGCTGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWRPWTH*TRWSCS
Trigger: GCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCTTCCAGGGCGTCCATaGACTCACTGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWLPGRP*THWTRW
Trigger: CCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTGCTGTTTTCCTCTTaGCTGTTGGTCTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLLFSS*LLVSRP
Trigger: GGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGAAGAACCTGGGTTaGAGTGATGGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWKNLG*SDGGCE
Trigger: CTCACAGCCCCCATCACTCCAACCCAGGTTCTTCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGACTTGAGCAGCCTGTaGGCTGGAAGAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRDLSSL*AGRTWV
Trigger: AACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCTAACCTGTCACCCTTaGAATCACCCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLLTCHP*NHPGPS
Trigger: GGAAGGACCTGGGTGATTCCAAGGGTGACAGGTTAG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTCGGGATGGCTCTCTaGGGCAAAGCACAGGAACGA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRFGMAL*GKAQER
Trigger: TCGTTCCTGTGCTTTGCCCCAGAGAGCCATCCCGAA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCAGGGCAGGGTCACTTaGCTTCCTGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWQGRVT*LPAEGG
Trigger: CCCACCCTCTGCAGGAAGCCAAGTGACCCTGCCCTG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGATGTGGCTTTTCCTaGATAGGGGTGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLRCGFS*IGVWCS
Trigger: GCTGCACCACACCCCTATCCAGGAAAAGCCACATCT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCTTCCCTGTGCCGGGTaGAGCAGCGGCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWLPCAG*SSGYSL
Trigger: CAGACTGTAGCCGCTGCTCCACCCGGCACAGGGAAG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGACGCCCGGAACTTCTaGGTCAAACAGAATACAGCG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLDARNF*VKQNTA
Trigger: CGCTGTATTCTGTTTGACCCAGAAGTTCCGGGCGTC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCTCCAGGTACACCTTaGGCACGTTGGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSPGTP*ARWAYK
Trigger: TTTGTATGCCCAACGTGCTCAAGGTGTACCTGGAGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGATAGTATTCCTCATCTaGGCTGCCACCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLIVFLI*AATLKG
Trigger: GCCTTTGAGGGTGGCAGCTCAGATGAGGAATACTAT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGTGTGTCTGGTGGCGTaGGTTTGTCAGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRVCLVA*VCQLHH
Trigger: ATGATGCAGCTGACAAACTCACGCCACCAGACACAC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCCACGGGTTCTAGACTaGCTCTGCAATCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRPRVLD*LCNLMA
Trigger: TGCCATGAGATTGCAGAGTCAGTCTAGAACCCGTGG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGGAGCCATCTGTGGTaGCAGGATTCTCTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGRSHLW*QDSLCC
Trigger: GCAACACAGAGAATCCTGTCACCACAGATGGCTCCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGTTGCAGGAGGCTCTaGGCAGAGGGAGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRCCRRL*AEGAVY
Trigger: ATAAACAGCTCCCTCTGCTCAGAGCCTCCTGCAACA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTCTTCTTGACACGGTaGAAGCTTTGGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLFLTR*KLWQGW
Trigger: CCATCCCTGCCAAAGCTTTCACCGTGTCAAGAAGAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGGGATTGGTCCATTCTaGTCACGTGTTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRGIGPF*SRVDSW
Trigger: CCAGCTGTCAACACGTGATCAGAATGGACCAATCCC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGCGCCGAAGCCACCTTaGCACCATCTGTTCTATTCT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRAPKPP*HHLFYS
Trigger: AGAATAGAACAGATGGTGGCAAGGTGGCTTCGGCGC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCGCCGAAGCCACCTTaGCACCATCTGTTCTATTCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAPKPP*HHLFYS
Trigger: AGAATAGAACAGATGGTGGCAAGGTGGCTTCGGCGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCACCAGGGAAAAGCTTaGCGTGAGCAGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWHQGKA*REQSRL
Trigger: CAGGCGGCTCTGCTCACGGCAAGCTTTTCCCTGGTG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACTTCCTCAGCAAAGTaGACCTTCACGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGTSSAK*TFTGLL
Trigger: GAGCAACCCCGTGAAGGTGCACTTTGCTGAGGAAGT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCGCAAAGTACTCGATaGTTCGGATGGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAQSTR*FGWTAS
Trigger: AGAAGCTGTCCATCCGAAGCATCGAGTACTTTGCGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCACTGTCTGTCATGCTaGTGGCCCCGCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWHCLSC*WPRRCL
Trigger: CAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCACTGGTCTCGACCCTaGTGTTTTCCTCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRHWSRP*CFPLGC
Trigger: ACAGCCAAGAGGAAAACAGCAGGGTCGAGACCAGTG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCCTGGGGTCTAGCCTaGCCATGCTCAGTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAWGLA*PCSVLV
Trigger: GACCAGAACTGAGCATGGGCAGGCTAGACCCCAGGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGAGGCTGGATTTGTaGTCTTGGTCTCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWRLDL*SWSPSR
Trigger: CCTTGAGGGAGACCAAGAGCACAAATCCAGCCTCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGAGGCTGGATTTGTaGTCTTGGTCTCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRWRLDL*SWSPSR
Trigger: CCTTGAGGGAGACCAAGAGCACAAATCCAGCCTCCA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTCCTCTGTCTCAGGCTaGAGGCCCCGGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSSVSG*RPRKHV
Trigger: CACATGCTTCCGGGGCCTGCAGCCTGAGACAGAGGA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTTTCTACCACCTGCTaGACCAGCTCTTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLSTTC*TSSSSC
Trigger: GCATGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACAGCAAAGCGCTCCTaGAGTACATCACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGTAKRS*STSLQL
Trigger: GAGCTGCAGTGATGTACTCCAGGAGCGCTTTGCTGT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGTCTGTCATGCTGCTaGCCCCGCAGGTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWCLSCC*PRRCLD
Trigger: GTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGCCCTCATACAGCCTaGGGTCTAGCCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWCPHTA*GLACPC
Trigger: GCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGTCTCCAGGAGGCCTaGCTCACCTTGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGLQEA*LTLHVL
Trigger: CAGGACATGCAAGGTGAGCCAGGCCTCCTGGAGACC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGCTGTGAGGGATGCTaGCTGAGGAGCCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGCEGC*LRSHLW
Trigger: CCACAGATGGCTCCTCAGCCAGCATCCCTCACAGCC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTAACCTGTCACCCTTaGAATCACCCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGLTCHP*NHPGPS
Trigger: GGAAGGACCTGGGTGATTCCAAGGGTGACAGGTTAG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAACAACTCCTGTTCCTaGGCCTCTCTGTTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLNNSCS*ASLFSP
Trigger: AGGGGAAAACAGAGAGGCCCAGGAACAGGAGTTGTT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTGGAGCCTTCGGGATaGCTCTCTGGGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWVEPSG*LSGAKH
Trigger: GTGCTTTGCCCCAGAGAGCCATCCCGAAGGCTCCAC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGCCCCGGAAGCATGTaGCATAGGAAAACTGACATC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGGPGSM*HRKTDI
Trigger: GATGTCAGTTTTCCTATGCCACATGCTTCCGGGGCC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGATGTGGCTTTTCCTaGATAGGGGTGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRRCGFS*IGVWCS
Trigger: GCTGCACCACACCCCTATCCAGGAAAAGCCACATCT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCACGTGTTGACAGCTaGCTAGGAGCTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSRVDS*LGASVS
Trigger: GCTCACAGAAGCTCCTAGCCAGCTGTCAACACGTGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGATCTCCTCGGGGGATTaGTCCATTCTGATCACGTGT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLISSGD*SILITC
Trigger: ACACGTGATCAGAATGGACCAATCCCCCGAGGAGAT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACGCCCGGAACTTCTaGGTCAAACAGAATACAGCG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGDARNF*VKQNTA
Trigger: CGCTGTATTCTGTTTGACCCAGAAGTTCCGGGCGTC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCATCTTCAGTTTCCCTaGGAATATCAGCCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLHLQFP*EYQPLV
Trigger: AACGAGCGGCTGATATTCTCAGGGAAACTGAAGATG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCTCCAGGTACACCTTaGGCACGTTGGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSPGTP*ARWAYK
Trigger: TTTGTATGCCCAACGTGCTCAAGGTGTACCTGGAGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCTGAAGGTAGACCTTaGCCATGCTCACTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGPEGRP*PCSLSQ
Trigger: CTGAGAAAGTGAGCATGGTCAAGGTCTACCTTCAGG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGAAAAGGCCTGACTTaGGCAGCCTGTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGKGLT*AACGLE
Trigger: TTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTTCCGAGCCTATTTCTaGCCGCACCTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWFRAYF*PHLSQL
Trigger: GAGCTGGGAGAGGTGCGGTCAGAAATAGGCTCGGAA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCAAGAGTTTCACGCTaGAGTCATGGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGPRVSR*SHGSLS
Trigger: AGAGAGGCTACCATGACTTCAGCGTGAAACTCTTGG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCCTGGAGTACATCACTaGAGCTCTGAAGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLPGVHH*SSEGRD
Trigger: ATCTCTACCTTCAGAGCTGCAGTGATGTACTCCAGG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGACCTCTTCTGGTTaGCTCAGGTGTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWTSSG*LRCGAV
Trigger: GACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGTAGTCAGTCCGGCTaGCCTCATACAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSSQSG*PHTAWG
Trigger: ACCCCAGGCTGTATGAGGGCAGCCGGACTGACTACT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGTCACTTGGCTTCCTaGAGAGGGTGGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGHLAS*RGWGGK
Trigger: CTTACCTCCCCACCCTCTGCAGGAAGCCAAGTGACC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCTTCTGTGAGCCCATaGATAGCCGGCTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWASVSP*IAGSGF
Trigger: AAAGCCGGAGCCGGCTATGCATGGGCTCACAGAAGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCAAAGAGATCTTCTGTaGCTGGGCACAGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLQRDLL*LGTGID
Trigger: ATCTATGCCTGTGCCCAGCCACAGAAGATCTCTTTG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTGCCTGGGGAGATGCTaGAACACAGGTTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLCLGRC*NTGYSS
Trigger: ACTACTATAACCTGTGTTCCAGCATCTCCCCAGGCA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCATGATCCTGGAGGCTaGATTTGTGCTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGHDPGG*ICALGL
Trigger: GAGACCAAGAGCACAAATCCAGCCTCCAGGATCATG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGTTTCCATGGTCTCTaGCTCCATCTCCATGATCCT +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGGFHGL*LHLHDP
Trigger: AGGATCATGGAGATGGAGCCAGAGACCATGGAAACC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGATTCTCTGTGTTGCTaGGGTCAATTCGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGDSLCC*GQFGGE
Trigger: TTCGCCTCCGAATTGACCCCAGCAACACAGAGAATC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGGCTGGAAGAACCTaGGTTGGAGTGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWAGRT*VGVMGA
Trigger: AGCCCCCATCACTCCAACCCAGGTTCTTCCAGCCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGGGGTGGTGCCACCTaGGTCTTGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGGGAT*VLIWRY
Trigger: GTATCTCCAGATCAAGACCCAGGTGGCACCACCCCC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAACAACTCCTGTTCCTaGGCCTCTCTGTTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRNNSCS*ASLFSP
Trigger: AGGGGAAAACAGAGAGGCCCAGGAACAGGAGTTGTT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTCTGCTGGTGAGCCATaGCCTGAATCTGCCGAGCGA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSAGEP*PESAER
Trigger: TCGCTCGGCAGATTCAGGCCATGGCTCACCAGCAGA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGGCTCTCTGTGAGTTaGACAAAGCCCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWRLSVS*TKPSGA
Trigger: TGCCCCCGAGGGCTTTGTCCAACTCACAGAGAGCCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCATCTTCAGTTTCCCTaGGAATATCAGCCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRHLQFP*EYQPLV
Trigger: AACGAGCGGCTGATATTCTCAGGGAAACTGAAGATG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCGGGAATCAATGACTaGCTTGGTTTCCATGGTCTC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSGIND*LGFHGL
Trigger: GAGACCATGGAAACCAAGTCAGTCATTGATTCCCGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGACACTCGGGAATCAATaGCTGACTTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRTLGNQ*LTWFPW
Trigger: CCATGGAAACCAAGTCAGTCATTGATTCCCGAGTGT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTCTGATGTGTCTCCTTaGGAGACGTGGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSDVSP*ETWCGP
Trigger: AGGGCCACACCACGTCTCTCAAGGAGACACATCAGA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCCGGAGGGCAGAGTTaGACTTCATCTCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAGGQS*TSSPQQ
Trigger: TTGCTGTGGAGATGAAGTGCAACTCTGCCCTCCGGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCTGTCCTCAGGCTCTaGAGTGAGTTCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAVLRL*SEFFGG
Trigger: ACCCCCAAAGAACTCACTGCAGAGCCTGAGGACAGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGATCACGCGGTCAAGCTaGTCTGCCTTTATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRITRSS*SAFIVS
Trigger: AGAGACAATAAAGGCAGAGCAGCTTGACCGCGTGAT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCGGCTTTCTGAAAAATaGAAGGTGCACTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGRLSEK*KVHLSG
Trigger: CCCTGACAAGTGCACCTTGCATTTTTCAGAAAGCCG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGGCAGCGGGAGTCCTaGGATTCTTCCCTTTCTACC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWRQRES*DSSLST
Trigger: GGTAGAAAGGGAAGAATCCCAGGACTCCCGCTGCCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGTCACTGCAGGCCCTaGACTCGTAGCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSHCRP*TRSLLQ
Trigger: CTGAAGAAGGCTACGAGTCCAGGGCCTGCAGTGACT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGAAGAACCTGGGTTaGAGTGATGGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWKNLG*SDGGCE
Trigger: CTCACAGCCCCCATCACTCCAACCCAGGTTCTTCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGACCTGGGTCTTGATCTaGAGATACGATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLTWVLI*RYDWKR
Trigger: CCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGTTTATTTCACCAGCTaGAGCTCTAACGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRVYFTS*SSNVKG
Trigger: GCCCTTGACGTTAGAGCTCCAGCTGGTGAAATAAAC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTTCGGGATGGCTCTCTaGGGCAAAGCACAGGAACGA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWFGMAL*GKAQER
Trigger: TCGTTCCTGTGCTTTGCCCCAGAGAGCCATCCCGAA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGTTTGCCTCAAACTTaGAAGCTTTGGTCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRCLPQT*KLWSVR
Trigger: ACGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTGTGTCTGGTGGCGTaGGTTTGTCAGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWVCLVA*VCQLHH
Trigger: ATGATGCAGCTGACAAACTCACGCCACCAGACACAC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGTTGCAGGAGGCTCTaGGCAGAGGGAGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWCCRRL*AEGAVY
Trigger: ATAAACAGCTCCCTCTGCTCAGAGCCTCCTGCAACA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTCCCTTTCTACCACCTaGTGGACCAGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSLSTT*WTSSSS
Trigger: TGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGACCTGGGTCTTGATCTaGAGATACGATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRTWVLI*RYDWKR
Trigger: CCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGCCCCGGAAGCATGTaGCATAGGAAAACTGACATC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGPGSM*HRKTDI
Trigger: GATGTCAGTTTTCCTATGCCACATGCTTCCGGGGCC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCGGACAACTGTAATTaGAAGAGCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGADNCN*KSIFSF
Trigger: GAAACTGAAGATGCTCTTTCAATTACAGTTGTCCGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGATAGTATTCCTCATCTaGGCTGCCACCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWIVFLI*AATLKG
Trigger: GCCTTTGAGGGTGGCAGCTCAGATGAGGAATACTAT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCCAAGAGTTTCACGCTaGAGTCATGGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWPRVSR*SHGSLS
Trigger: AGAGAGGCTACCATGACTTCAGCGTGAAACTCTTGG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCGCAAAGTACTCGATaGTTCGGATGGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWAQSTR*FGWTAS
Trigger: AGAAGCTGTCCATCCGAAGCATCGAGTACTTTGCGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCGTGAGTTTGTCAGCTaGATCATAGTATTCCTCATC +
Preference number: 4 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGREFVS*IIVFLI
Trigger: GATGAGGAATACTATGATGCAGCTGACAAACTCACG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGGAAAACTGACATCTaGAGTGTTCTATGCCAATCT +
Preference number: 4 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLRKTDI*SVLCQS
Trigger: AGATTGGCATAGAACACTGCAGATGTCAGTTTTCCT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCATGATCCTGGAGGCTaGATTTGTGCTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWHDPGG*ICALGL
Trigger: GAGACCAAGAGCACAAATCCAGCCTCCAGGATCATG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGTTTCCATGGTCTCTaGCTCCATCTCCATGATCCT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGFHGL*LHLHDP
Trigger: AGGATCATGGAGATGGAGCCAGAGACCATGGAAACC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGATTCTCTGTGTTGCTaGGGTCAATTCGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWDSLCC*GQFGGE
Trigger: TTCGCCTCCGAATTGACCCCAGCAACACAGAGAATC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAACTCTGGCCAGATGTaGCTTTTCCTGGATAGGGGT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWNSGQM*LFLDRG
Trigger: ACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGTT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGATCTCCTCGGGGGATTaGTCCATTCTGATCACGTGT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWISSGD*SILITC
Trigger: ACACGTGATCAGAATGGACCAATCCCCCGAGGAGAT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGACACTCGGGAATCAATaGCTGACTTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWTLGNQ*LTWFPW
Trigger: CCATGGAAACCAAGTCAGTCATTGATTCCCGAGTGT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGTAGAGATATTCAAATaGCACAGGGTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRVEIFK*HRVFFQ
Trigger: CTGAAAGAAGACCCTGTGGCATTTGAATATCTCTAC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCCTGGAGTACATCACTaGAGCTCTGAAGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWPGVHH*SSEGRD
Trigger: ATCTCTACCTTCAGAGCTGCAGTGATGTACTCCAGG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCTCACTGGCGTGAGTaGCTGGGCTGGGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPHWRE*LGWVPG
Trigger: CCCGGGAACCCAGCCCAGGCACTCACGCCAGTGAGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCGGCCACTTCCCTGTaGCGGGTGGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPATSL*RVEQRL
Trigger: TAGCCGCTGCTCCACCCGGCACAGGGAAGTGGCCGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCCTGCTGGCACCACTaGGGAGGTGCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPCWHH*GGAAPC
Trigger: GCAGGGAGCTGCACCTCCCCAGTGGTGCCAGCAGGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGTGCCTCACTGGCGTaGGTGCCTGGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRCASLA*VPGLGS
Trigger: GGAACCCAGCCCAGGCACTCACGCCAGTGAGGCACA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTTCATTTGGAGAATCTaGTCACCAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWFIWRI*SPGKSL
Trigger: CAAGCTTTTCCCTGGTGATCAGATTCTCCAAATGAA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGCGGACAACTGTAATTaGAAGAGCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWADNCN*KSIFSF
Trigger: GAAACTGAAGATGCTCTTTCAATTACAGTTGTCCGC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGAATACAGCGGCTGTaGGGGCCGTGCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRRIQRL*GPCTGG
Trigger: CCCGCCAGTGCACGGCCCTCACAGCCGCTGTATTCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGCACCTTCACGGGGTTaGTCTTCAGCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRAPSRG*SSAGPA
Trigger: AGCGGGCCCGGCTGAAGAGCAACCCCGTGAAGGTGC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGGGCTGAGCTGTCCCTaGAGCGCCGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRGLSCP*SAEATL
Trigger: CAAGGTGGCTTCGGCGCTCCAGGGACAGCTCAGCCC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCTGCCGGGAAGCTGTaGTCTCTGAGCCCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPAGKL*SLSPSH
Trigger: GTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCACCCCTCCCTGCCTaGTTGGCTCTCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSPLPA*LALLPL
Trigger: CAGAGGGAGGAGAGCCAAGCAGGCAGGGAGGGGTGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGGCCCCGCAGGTGCTTaGACCTCTTCTGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRGPAGA*TSSGCL
Trigger: GAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCCATCCAGCCCTGCTaGCACCACTGGGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSIQPC*HHWGGA
Trigger: TGCACCTCCCCAGTGGTGCCAGCAGGGCTGGATGGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGGCTCTCCTCCCTCTaGGCCCGGATGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRWLSSL*ARMQAF
Trigger: GAAAGCCTGCATCCGGGCCCAGAGGGAGGAGAGCCA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCAGGGCAGGGTCACTTaGCTTCCTGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRQGRVT*LPAEGG
Trigger: CCCACCCTCTGCAGGAAGCCAAGTGACCCTGCCCTG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCAGAGGCCGGCCAGCTaGACCAGGTGCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRQRPAS*TRCWKV
Trigger: CACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGCACAAAGCTCACCCTaGAGAGGCAGCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRAQSSP*RGSGSP
Trigger: AGGACTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGGAAGCTGTGCTCTCTaGGCCCGAGTCACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRGSCAL*ARVTQV
Trigger: CACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGTGAGGGATGCTGGCTaGGGAGCCATCTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRVRDAG*GAICGD
Trigger: GTCACCACAGATGGCTCCTCAGCCAGCATCCCTCAC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTGGATGTGCAGGGCTaGAAGCCGGAGGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRLDVQG*KPEGRV
Trigger: AACTCTGCCCTCCGGCTTGCAGCCCTGCACATCCAG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGACTCCTCCGAGTCACTaGAGGCCCTGGACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRTPPSH*RPWTRS
Trigger: GCTACGAGTCCAGGGCCTGCAGTGACTCGGAGGAGT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGTCTGTCATGCTGCTaGCCCCGCAGGTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRCLSCC*PRRCLD
Trigger: GTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGCTCTCTGTGTTGGCTaGGTCCGATGCCTCCGATTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRALCVG*VRCLRF
Trigger: GAATCGGAGGCATCGGACTCAGCCAACACAGAGAGC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTGTTTCCAGACCAGTaGAAGACGGAGTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRLFPDQ*KTELAG
Trigger: CCCGGCCAACTCCGTCTTCCACTGGTCTGGAAACAG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCAAAGTGGAAGAAGCTaGTCCCGCTGGAGGAGCACG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRQSGRS*SRWRST
Trigger: CGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCAGGGATTCCAGCATaGAGCCAGACTGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPGIPA*SQTEPP
Trigger: TGGAGGCTCAGTCTGGCTCCATGCTGGAATCCCTGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGCTGGACCAGGTGCTaGAAAGTGACCCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSWTRC*KVTRTA
Trigger: TGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCTGATGTGTCTCCTTaGGAGACGTGGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSDVSP*ETWCGP
Trigger: AGGGCCACACCACGTCTCTCAAGGAGACACATCAGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCACCTTGCATGTCCTaGAGGGAGGACACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSPCMS*REDTVG
Trigger: CCCAACTGTGTCCTCCCTGCAGGACATGCAAGGTGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGTTCTTTGGGGGTGGTaGCACCTGGGTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRVLWGW*HLGLDL
Trigger: CAGATCAAGACCCAGGTGGCACCACCCCCAAAGAAC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGGCAGCGGGAGTCCTaGGATTCTTCCCTTTCTACC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRRQRES*DSSLST
Trigger: GGTAGAAAGGGAAGAATCCCAGGACTCCCGCTGCCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGACTTGAGCAGCCTGTaGGCTGGAAGAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRDLSSL*AGRTWV
Trigger: AACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCTTCTTGACACGGTaGAAGCTTTGGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRLFLTR*KLWQGW
Trigger: CCATCCCTGCCAAAGCTTTCACCGTGTCAAGAAGAG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGGGATTGGTCCATTCTaGTCACGTGTTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRGIGPF*SRVDSW
Trigger: CCAGCTGTCAACACGTGATCAGAATGGACCAATCCC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGACTTCCTCAGCAAAGTaGACCTTCACGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRTSSAK*TFTGLL
Trigger: GAGCAACCCCGTGAAGGTGCACTTTGCTGAGGAAGT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCCCTTTCTACCACCTaGTGGACCAGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSLSTT*WTSSSS
Trigger: TGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCCTTGTACCTCATCTaGAGCCAAGGCCGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSLYLI*SQGRLF
Trigger: GAAGAGACGGCCTTGGCTGCAGATGAGGTACAAGGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGACTCGATGCTTCGGATaGACAGCTTCTCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRTRCFG*TASPSP
Trigger: CGGTGAAGGAGAAGCTGTCCATCCGAAGCATCGAGT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCTGAAGGTAGACCTTaGCCATGCTCACTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPEGRP*PCSLSQ
Trigger: CTGAGAAAGTGAGCATGGTCAAGGTCTACCTTCAGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTCTCTAGCAAATaGTCTGCAGAGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRLLSSK*SAEAQL
Trigger: AAGCTGAGCCTCTGCAGACCATTTGCTAGAGAGGAG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAACTCTGGCCAGATGTaGCTTTTCCTGGATAGGGGT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRNSGQM*LFLDRG
Trigger: ACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGTT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCGGGAATCAATGACTaGCTTGGTTTCCATGGTCTC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSGIND*LGFHGL
Trigger: GAGACCATGGAAACCAAGTCAGTCATTGATTCCCGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCAGGTCTTTTGCACTaGTGGATTCCAGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPGLLH*WIPATK
Trigger: CTTTGTTGCTGGAATCCAGCAGTGCAAAAGACCTGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGATCACGCGGTCAAGCTaGTCTGCCTTTATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRITRSS*SAFIVS
Trigger: AGAGACAATAAAGGCAGAGCAGCTTGACCGCGTGAT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCGGCTTTCTGAAAAATaGAAGGTGCACTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRRLSEK*KVHLSG
Trigger: CCCTGACAAGTGCACCTTGCATTTTTCAGAAAGCCG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCAAAGAGATCTTCTGTaGCTGGGCACAGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRQRDLL*LGTGID
Trigger: ATCTATGCCTGTGCCCAGCCACAGAAGATCTCTTTG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGTTTATTTCACCAGCTaGAGCTCTAACGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRVYFTS*SSNVKG
Trigger: GCCCTTGACGTTAGAGCTCCAGCTGGTGAAATAAAC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR TCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTTCATTTGGAGAATCTaGTCACCAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRFIWRI*SPGKSL
Trigger: CAAGCTTTTCCCTGGTGATCAGATTCTCCAAATGAA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCGTGAGTTTGTCAGCTaGATCATAGTATTCCTCATC +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRREFVS*IIVFLI
Trigger: GATGAGGAATACTATGATGCAGCTGACAAACTCACG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGTAGAGATATTCAAATaGCACAGGGTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRVEIFK*HRVFFQ
Trigger: CTGAAAGAAGACCCTGTGGCATTTGAATATCTCTAC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR GCA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGGAAAACTGACATCTaGAGTGTTCTATGCCAATCT +
Preference number: 4 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRRKTDI*SVLCQS
Trigger: AGATTGGCATAGAACACTGCAGATGTCAGTTTTCCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CAAAGGCCAGCGGGGGCAGTGCGGGCAGGCCCAGGGATTCCAGCATaGAGCCAGACTGAGCCTCCATCCAGCCCTGCTGGCACCACTGGG +
Preference number: 5 (lower is better)
Translates to: QRPAGAVRAGPGIPA*SQTEPPSSPAGTTG
Trigger: CCCAGTGGTGCCAGCAGGGCTGGATGGAGGCTCAGTCTGGCTCCATGCTGGAATCCCTGGGCCTGCCCGCACTGCCCCCGCTGGCCTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CCTGCTGGCACCACTGGGGAGGTGCAGCTCCCTGCCGGGAAGCTGTaGTCTCTGAGCCCGAGTCACTCAGGTGGCTGCCTGGGGAGATGC +
Preference number: 5 (lower is better)
Translates to: PAGTTGEVQLPAGKL*SLSPSHSGGCLGRC
Trigger: GCATCTCCCCAGGCAGCCACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGTGCCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp GCCTCCATCCAGCCCTGCTGGCACCACTGGGGAGGTGCAGCTCCCTaGCGGGAAGCTGTGCTCTCTGAGCCCGAGTCACTCAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASIQPCWHHWGGAAP*REAVLSEPESLRWL
Trigger: CAGCCACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGTGCCAGCAGGGCTGGATGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp GCACCACTGGGGAGGTGCAGCTCCCTGCCGGGAAGCTGTGCTCTCTaGGCCCGAGTCACTCAGGTGGCTGCCTGGGGAGATGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: APLGRCSSLPGSCAL*ARVTQVAAWGDAGT
Trigger: TGTTCCAGCATCTCCCCAGGCAGCCACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTGCACCTTCACGGGGTaGCTCTTCAGCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLCTFTG*LFSRAR
Trigger: GCGGGCCCGGCTGAAGAGCAACCCCGTGAAGGTGCA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp AGTCAGTCCGGCTGCCCTCATACAGCCTGGGGTCTAGCCTGCCCATaGTCAGTTCTGGTCCCCAGCTGCAGGCCTCCGAAGCAAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SQSGCPHTAWGLACP*SVLVPSCRPPKQGP
Trigger: AGGGCCTTGCTTCGGAGGCCTGCAGCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCAGCCGGACTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CTCCGATTCAGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTGCTTaGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGTCGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LRFSTVCHAAGPAGA*TSSGCLRCGAVARG
Trigger: CCCCCTGGCGACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CGTCCTCTTCCAGGGCGTCCATGGACTCACTGGACCCGCTGGTCCTaGAGCCTCGGCTCTCTGTGTTGGCTGAGTCCGATGCCTCCGATT +
Preference number: 5 (lower is better)
Translates to: RPLPGRPWTHWTRWS*SLGSLCWLSPMPPI
Trigger: AATCGGAGGCATCGGACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CGCTGGAGGAGCACGCATCTAAGTCGTCCTCTTCCAGGGCGTCCATaGACTCACTGGACCCGCTGGTCCTGCAGCCTCGGCTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RWRSTHLSRPLPGRP*THWTRWSCSLGSLC
Trigger: ACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACGACTTAGATGCGTGCTCCTCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CCTCAAGGAAGCCAGCAACCCCAAGGCCTTGGTCTCCAGGAGGCCTaGCTCACCTTGCATGTCCTGCAGGGAGGACACAGTTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PQGSQQPQGLGLQEA*LTLHVLQGGHSWGG
Trigger: CCCTCCCCAACTGTGTCCTCCCTGCAGGACATGCAAGGTGAGCCAGGCCTCCTGGAGACCAAGGCCTTGGGGTTGCTGGCTTCCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGGTCCAGGGGGTCCTaGGGCACAAAGCTCACCCTG +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLRSRGS*GTKLTL
Trigger: CAGGGTGAGCTTTGTGCCCAAGGACCCCCTGGACCT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp GGGGCTCCAGTACACAGTCCACTTCAGAGGACTCCTCCGAGTCACTaGAGGCCCTGGACTCGTAGCCTTCTTCAGCGGATACCCGGTGCG +
Preference number: 5 (lower is better)
Translates to: GAPVHSPLQRTPPSH*RPWTRSLLQRIPGA
Trigger: CGCACCGGGTATCCGCTGAAGAAGGCTACGAGTCCAGGGCCTGCAGTGACTCGGAGGAGTCCTCTGAAGTGGACTGTGTACTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp GGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGTCGCCAGGGGGCTaGTCCTCTCTAGCAAATGGTCTGCAGAGGCTCAGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GPLLVASGVGLSPGG*SSLANGLQRLSFTR
Trigger: CCTGGTGAAGCTGAGCCTCTGCAGACCATTTGCTAGAGAGGAGCAGCCCCCTGGCGACAGCCCCACACCTGAGGCAACCAGAAGAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp ATGCCTCCGATTCAGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTaGTTGGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGTCGCCAG +
Preference number: 5 (lower is better)
Translates to: MPPIQHCLSCCWPRR*LDLFWLPQVWGCRQ
Trigger: CTGGCGACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp AGCAGAACTCTGGCCAGATGTGGCTTTTCCTGGATAGGGGTGTGGTaGAGCTGTAGGCACGGGCTGCCCTCCAGGGCAGGGTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: SRTLARCGFSWIGVW*SCRHGLPSRAGSLG
Trigger: GCCAAGTGACCCTGCCCTGGAGGGCAGCCCGTGCCTACAGCTGCACCACACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CCCGGTGCGTCGGCCGTCTGTTTCCAGACCAGTGGAAGACGGAGTTaGCCGGGTCCACAAACAGCCTGTAGTACCCAGCGATCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PGASAVCFQTSGRRS*PGPQTACSTQRSSR
Trigger: CCTGCTTGATCGCTGGGTACTACAGGCTGTTTGTGGACCCGGCCAACTCCGTCTTCCACTGGTCTGGAAACAGACGGCCGACGCACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp GTACACAGTCCACTTCAGAGGACTCCTCCGAGTCACTGCAGGCCCTaGACTCGTAGCCTTCTTCAGCGGATACCCGGTGCGTCGGCCGTC +
Preference number: 5 (lower is better)
Translates to: VHSPLQRTPPSHCRP*TRSLLQRIPGASAV
Trigger: GACGGCCGACGCACCGGGTATCCGCTGAAGAAGGCTACGAGTCCAGGGCCTGCAGTGACTCGGAGGAGTCCTCTGAAGTGGACTGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CTAAGTCGTCCTCTTCCAGGGCGTCCATGGACTCACTGGACCCGCTaGTCCTGCAGCCTCGGCTCTCTGTGTTGGCTGAGTCCGATGCCT +
Preference number: 5 (lower is better)
Translates to: LSRPLPGRPWTHWTR*SCSLGSLCWLSPMP
Trigger: AGGCATCGGACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACGACTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp GTCTCAGAGCCCTGGAGCAGAACTCTGGCCAGATGTGGCTTTTCCTaGATAGGGGTGTGGTGCAGCTGTAGGCACGGGCTGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VSEPWSRTLARCGFS*IGVWCSCRHGLPSR
Trigger: CCTGGAGGGCAGCCCGTGCCTACAGCTGCACCACACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGTTCTGCTCCAGGGCTCTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CAGTCTGTGAACTGGAAGCAGAGGCCGGCCAGCTGGACCAGGTGCTaGAAAGTGACCCGCACAGCACCTTGCATCTCCTCGGGGGATTGG +
Preference number: 5 (lower is better)
Translates to: QSVNWKQRPASWTRC*KVTRTAPCISSGDW
Trigger: CCAATCCCCCGAGGAGATGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCACAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp GAGCAGCGGCTACAGTCTGTGAACTGGAAGCAGAGGCCGGCCAGCTaGACCAGGTGCTGGAAAGTGACCCGCACAGCACCTTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: EQRLQSVNWKQRPAS*TRCWKVTRTAPCIS
Trigger: GGAGATGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCACAGACTGTAGCCGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGCCCCGCAGGTGCTaGGACCTCTTCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRWPRRC*DLFWLP
Trigger: AGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGCCCCGCAGGTGCTaGGACCTCTTCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWPRRC*DLFWLP
Trigger: AGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp GTCTGGTGGCGTGAGTTTGTCAGCTGCATCATAGTATTCCTCATCTaGGCTGCCACCCTCAAAGGCCAGCGGGGGCAGTGCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VWWREFVSCIIVFLI*AATLKGQRGQCGQA
Trigger: GGCCTGCCCGCACTGCCCCCGCTGGCCTTTGAGGGTGGCAGCTCAGATGAGGAATACTATGATGCAGCTGACAAACTCACGCCACCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CTGTGGCTGGGCACAGGCATAGATCCGCTCCTGGATGTGCAGGGCTaGAAGCCGGAGGGCAGAGTTGCACTTCATCTCCACAGCAAAGCG +
Preference number: 5 (lower is better)
Translates to: LWLGTGIDPLLDVQG*KPEGRVALHLHSKA
Trigger: CGCTTTGCTGTGGAGATGAAGTGCAACTCTGCCCTCCGGCTTGCAGCCCTGCACATCCAGGAGCGGATCTATGCCTGTGCCCAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CTACAGTCTGTGAACTGGAAGCAGAGGCCGGCCAGCTGGACCAGGTaGTGGAAAGTGACCCGCACAGCACCTTGCATCTCCTCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: LQSVNWKQRPASWTR*WKVTRTAPCISSGD
Trigger: ATCCCCCGAGGAGATGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCACAGACTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGGCTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATGCTGCTaGCCCCGCAGGTGCTTGGACCTCTTCTGGTTGCCTCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: WLSPMPPIQHCLSCC*PRRCLDLFWLPQVW
Trigger: CCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGGACTCACTGGACCCGCTGGTCCTGCAGCCTCGGCTCTCTGTGTTaGCTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: WTHWTRWSCSLGSLC*LSPMPPIQHCLSCC
Trigger: GCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp AGCACGCATCTAAGTCGTCCTCTTCCAGGGCGTCCATGGACTCACTaGACCCGCTGGTCCTGCAGCCTCGGCTCTCTGTGTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: STHLSRPLPGRPWTH*TRWSCSLGSLCWLS
Trigger: ACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACGACTTAGATGCGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGGAGCAGAACTCTGGCCAGATGTGGCTTTTCCTGGATAGGGGTGTaGTGCAGCTGTAGGCACGGGCTGCCCTCCAGGGCAGGGTCACTT +
Preference number: 5 (lower is better)
Translates to: WSRTLARCGFSWIGV*CSCRHGLPSRAGSL
Trigger: AAGTGACCCTGCCCTGGAGGGCAGCCCGTGCCTACAGCTGCACCACACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGTTCTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp TGTTGGCTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATGCTaGTGGCCCCGCAGGTGCTTGGACCTCTTCTGGTTGCCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: CWLSPMPPIQHCLSC*WPRRCLDLFWLPQV
Trigger: CACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CTGTGTTGGCTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATaGTGCTGGCCCCGCAGGTGCTTGGACCTCTTCTGGTTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LCWLSPMPPIQHCLS*CWPRRCLDLFWLPQ
Trigger: CTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAGCCAACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp TATAGTAGTCAGTCCGGCTGCCCTCATACAGCCTGGGGTCTAGCCTaGCCATGCTCAGTTCTGGTCCCCAGCTGCAGGCCTCCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: YSSQSGCPHTAWGLA*PCSVLVPSCRPPKQ
Trigger: TTGCTTCGGAGGCCTGCAGCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCAGCCGGACTGACTACTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CCTTTGAGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTGGTCCCGCTaGAGGAGCACGCATCTAAGTCGTCCTCTTCCAGGGCGTCCATGG +
Preference number: 5 (lower is better)
Translates to: PLRSLVGQSGRSWSR*RSTHLSRPLPGRPW
Trigger: CCATGGACGCCCTGGAAGAGGACGACTTAGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TCTCGAGGCCCTTTGAGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTaGTCCCGCTGGAGGAGCACGCATCTAAGTCGTCCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SRGPLRSLVGQSGRS*SRWRSTHLSRPLPG
Trigger: CCCTGGAAGAGGACGACTTAGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGGCTGTTGGTCTCGAGGCCCTTTGAGAAGCCTGGTGGGCCAAAGTaGAAGAAGCTGGTCCCGCTGGAGGAGCACGCATCTAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: WLLVSRPFEKPGGPK*KKLVPLEEHASKSS
Trigger: GGACGACTTAGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCAACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp AAACTGAAGGAGGTGACCCTGCTGAGACTGGTGGAGCCTTCGGGATaGCTCTCTGGGGCAAAGCACAGGAACGACCTCTCAGGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: KLKEVTLLRLVEPSG*LSGAKHRNDLSGGR
Trigger: CCTACCGCCTGAGAGGTCGTTCCTGTGCTTTGCCCCAGAGAGCCATCCCGAAGGCTCCACCAGTCTCAGCAGGGTCACCTCCTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGAGCGCCGAAGCCACCTaGCCACCATCTGTTCTATTC +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSAEAT*PPSVLF
Trigger: GAATAGAACAGATGGTGGCAAGGTGGCTTCGGCGCT...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGACCTCTTCTGGTaGCCTCAGGTGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRLDLFW*PQVWGC
Trigger: ACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGCAACCCCAAGGCCTaGGTCTCCAGGAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSNPKA*VSRRPG
Trigger: GCCAGGCCTCCTGGAGACCAAGGCCTTGGGGTTGCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTGGAAAAGGCCTGACTaGAGCAGCCTGTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGWKRPD*SSLWAG
Trigger: TCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCA...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCTGCTCTGCCTTTATaGTCTCTGGCGGGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAALPL*SLAGRL
Trigger: CAGCCTTCCCGCCAGAGACAATAAAGGCAGAGCAGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGCATCTCCTCGGGGGATaGGTCCATTCTGATCACGTG +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLHLLGG*VHSDHV
Trigger: CACGTGATCAGAATGGACCAATCCCCCGAGGAGATG...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp CTCGACCCTGCTGTTTTCCTCTTGGCTGTTGGTCTCGAGGCCCTTTaGGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTGGTCCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: LDPAVFLLAVGLEAL*EAWWAKVEEAGPAG
Trigger: TCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAGGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp GGAAGAACCTGGGTTGGAGTGATGGGGGCTGTGAGGGATGCTGGCTaGGGAGCCATCTGTGGTGACAGGATTCTCTGTGTTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GRTWVGVMGAVRDAG*GAICGDRILCVAGV
Trigger: GACCCCAGCAACACAGAGAATCCTGTCACCACAGATGGCTCCTCAGCCAGCATCCCTCACAGCCCCCATCACTCCAACCCAGGTTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp AGATCCGCTCCTGGATGTGCAGGGCTGCAAGCCGGAGGGCAGAGTTaGACTTCATCTCCACAGCAAAGCGCTCCTGGAGTACATCACTGC +
Preference number: 5 (lower is better)
Translates to: RSAPGCAGLQAGGQS*TSSPQQSAPGVHHC
Trigger: GCAGTGATGTACTCCAGGAGCGCTTTGCTGTGGAGATGAAGTGCAACTCTGCCCTCCGGCTTGCAGCCCTGCACATCCAGGAGCGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp GGGTCCTTGGGCACAAAGCTCACCCTGAAGAGGCAGCGGGAGTCCTaGGATTCTTCCCTTTCTACCACCTGCTGGACCAGCTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GSLGTKLTLKRQRES*DSSLSTTCWTSSSS
Trigger: TGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGAAGAATCCCAGGACTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGCCCAAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGGAACACAGGTTATAGTAGTCAGTCCGGCTGCCCTCATACAGCCTaGGGTCTAGCCTGCCCATGCTCAGTTCTGGTCCCCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WNTGYSSQSGCPHTA*GLACPCSVLVPSCR
Trigger: CCTGCAGCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCAGCCGGACTGACTACTATAACCTGTGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TGCTCTCTGAGCCCGAGTCACTCAGGTGGCTGCCTGGGGAGATGCTaGAACACAGGTTATAGTAGTCAGTCCGGCTGCCCTCATACAGCC +
Preference number: 5 (lower is better)
Translates to: CSLSPSHSGGCLGRC*NTGYSSQSGCPHTA
Trigger: GGCTGTATGAGGGCAGCCGGACTGACTACTATAACCTGTGTTCCAGCATCTCCCCAGGCAGCCACCTGAGTGACTCGGGCTCAGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGCAGGCCAGGTCTTTaGCACTGCTGGATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSRPGL*HCWIPA
Trigger: TGCTGGAATCCAGCAGTGCAAAAGACCTGGCCTGCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCCTCGGCTCTCTGTGTaGGCTGAGTCCGATGCCTCC +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWPRLSV*AESDAS
Trigger: GGAGGCATCGGACTCAGCCAACACAGAGAGCCGAGG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCTGGATTTGTGCTCTaGGTCTCCCTCAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAGFVL*VSLKEA
Trigger: GGCTTCCTTGAGGGAGACCAAGAGCACAAATCCAGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCCTGGAGGCTGGATTaGTGCTCTTGGTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSWRLD*CSWSPS
Trigger: TGAGGGAGACCAAGAGCACAAATCCAGCCTCCAGGA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp GCACCTTGCATCTCCTCGGGGGATTGGTCCATTCTGATCACGTGTTaGCAGCTGGCTAGGAGCTTCTGTGAGCCCATGCATAGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: APCISSGDWSILITC*QLARSFCEPMHSRL
Trigger: GAGCCGGCTATGCATGGGCTCACAGAAGCTCCTAGCCAGCTGTCAACACGTGATCAGAATGGACCAATCCCCCGAGGAGATGCAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CTGAAGAGGCAGCGGGAGTCCTGGGATTCTTCCCTTTCTACCACCTaGTGGACCAGCTCTTCCTCATGCAGAAGGTGTAGGCGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LKRQRESWDSSLSTT*WTSSSSCRRCRREM
Trigger: CATCTCCCGCCTACACCTTCTGCATGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGAAGAATCCCAGGACTCCCGCTGCCTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTTCTCCAGGTACACCTaGAGCACGTTGGGCATACAA +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLFSRYT*STLGIQ
Trigger: TTGTATGCCCAACGTGCTCAAGGTGTACCTGGAGAA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGCTAATCCCGTACTaGGCCCCAACCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWLIPY*APTRRA
Trigger: TGCCCTCCTGGTTGGGGCCAAGTACGGGATTAGCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGTCTCGAGGCCCTTaGAGAAGCCTGGTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWSRGP*RSLVGQ
Trigger: TTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTTTTCCTCTTGGCTGTaGGTCTCGAGGCCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRFSSWL*VSRPFE
Trigger: CTCAAAGGGCCTCGAGACCAACAGCCAAGAGGAAAA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACAGGATTCTCTGTGTaGCTGGGGTCAATTCGGAGG +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGTGFSV*LGSIRR
Trigger: CCTCCGAATTGACCCCAGCAACACAGAGAATCCTGT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp CAGGCTGCAGGCCCCGGAAGCATGTGGCATAGGAAAACTGACATCTaGAGTGTTCTATGCCAATCTCCGCGGGCGCCACTTCGTTTATGC +
Preference number: 5 (lower is better)
Translates to: QAAGPGSMWHRKTDI*SVLCQSPRAPLRLC
Trigger: GCATAAACGAAGTGGCGCCCGCGGAGATTGGCATAGAACACTGCAGATGTCAGTTTTCCTATGCCACATGCTTCCGGGGCCTGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTACACCTTGAGCACGTaGGGCATACAAAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRYTLST*GIQSRE
Trigger: CTCTCTGCTTTGTATGCCCAACGTGCTCAAGGTGTA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGTCAAACTTGAAAGCTTaGGTCTGTCCGTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLSNLKA*VCPFSR
Trigger: CCTGGAGAACGGACAGACCAAAGCTTTCAAGTTTGA...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCCTGCTGTTTTCCTCTaGGCTGTTGGTCTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWPAVFL*AVGLEA
Trigger: GGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAGG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGCTTTTCCTCAGGGACTaGGCATACTTCTTCACCCCT +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRLFLRD*AYFFTP
Trigger: AGGGGTGAAGAAGTATGCCAAGTCCCTGAGGAAAAG...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGAATCAATGACTGACTaGGTTTCCATGGTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLESMTD*VSMVSG
Trigger: GCCAGAGACCATGGAAACCAAGTCAGTCATTGATTC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGAAAAGGCCTGACTaGAGCAGCCTGTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWKRPD*SSLWAG
Trigger: TCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGGACTGTCGTCACCTTaGCTCTCTGCTGGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWGLSSP*LSAGEP
Trigger: TGGCTCACCAGCAGAGAGCAAAGGTGACGACAGTCC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp TGGGATTCTTCCCTTTCTACCACCTGCTGGACCAGCTCTTCCTCATaGAGAAGGTGTAGGCGGGAGATGCTGTACTGTTCCTCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: WDSSLSTTCWTSSSS*RRCRREMLYCSSRA
Trigger: GGCCCTTGAGGAACAGTACAGCATCTCCCGCCTACACCTTCTGCATGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGAAGAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp ATTAGGGTGATCACTAGAGAGAGGGAAGGTGCTGTCCTCAGGCTCTaGAGTGAGTTCTTTGGGGGTGGTGCCACCTGGGTCTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: IRVITREREGAVLRL*SEFFGGGATWVLIW
Trigger: CCAGATCAAGACCCAGGTGGCACCACCCCCAAAGAACTCACTGCAGAGCCTGAGGACAGCACCTTCCCTCTCTCTAGTGATCACCCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp AGGTGTGATCCGTCTGTAGGAAGGACCTTCTTTTCCTCAGGGACTTaGCATACTTCTTCACCCCTCCCTGCCTGCTTGGCTCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RCDPSVGRTFFSSGT*HTSSPLPACLALLP
Trigger: AGGGAGGAGAGCCAAGCAGGCAGGGAGGGGTGAAGAAGTATGCCAAGTCCCTGAGGAAAAGAAGGTCCTTCCTACAGACGGATCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp TTCTTTGGGGGTGGTGCCACCTGGGTCTTGATCTGGAGATACGATTaGAAAAGGCCTGACTTGAGCAGCCTGTGGGCTGGAAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: FFGGGATWVLIWRYD*KRPDLSSLWAGRTW
Trigger: CCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGCACCACCCCCAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CTCTGCAGTGAGTTCTTTGGGGGTGGTGCCACCTGGGTCTTGATCTaGAGATACGATTGGAAAAGGCCTGACTTGAGCAGCCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LCSEFFGGGATWVLI*RYDWKRPDLSSLWA
Trigger: AGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGCACCACCCCCAAAGAACTCACTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp GCTGTCCTCAGGCTCTGCAGTGAGTTCTTTGGGGGTGGTGCCACCTaGGTCTTGATCTGGAGATACGATTGGAAAAGGCCTGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: AVLRLCSEFFGGGAT*VLIWRYDWKRPDLS
Trigger: GCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGCACCACCCCCAAAGAACTCACTGCAGAGCCTGAGGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGCGCCGAAGCCACCTaGCCACCATCTGTTCTATTC +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSAEAT*PPSVLF
Trigger: GAATAGAACAGATGGTGGCAAGGTGGCTTCGGCGCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGGAGGAGGACATCTTaGTCTAGTGTTACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRWRRTS*SSVTVC
Trigger: GCACACAGTAACACTAGACAAAGATGTCCTCCTCCA...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTATGTTGAGCTTGCTGTaGATGATCTGGCTAATCCCG +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGMLSLL*MIWLIP
Trigger: CGGGATTAGCCAGATCATCAACAGCAAGCTCAACAT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGAGCAGGCCAGGTCTTTaGCACTGCTGGATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWSRPGL*HCWIPA
Trigger: TGCTGGAATCCAGCAGTGCAAAAGACCTGGCCTGCT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 90 bp TGGTGCCACCTGGGTCTTGATCTGGAGATACGATTGGAAAAGGCCTaGCTTGAGCAGCCTGTGGGCTGGAAGAACCTGGGTTGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: WCHLGLDLEIRLEKA*LEQPVGWKNLGWSD
Trigger: ATCACTCCAACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGAGCGTGGATATGATGTaGAGCTTGCTGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRSVDMM*SLLLMI
Trigger: GATCATCAACAGCAAGCTCAACATCATATCCACGCT...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTAGCGTGGATATGATGTaGAGCTTGCTGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGSVDMM*SLLLMI
Trigger: GATCATCAACAGCAAGCTCAACATCATATCCACGCT...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTCAGTTCATTGTTCATTaGGAGAATCTGATCACCAGG +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGQFIVH*ENLITR
Trigger: CCTGGTGATCAGATTCTCCAAATGAACAATGAACTG...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp GGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGACCTGGCTTTCTTGATGTCTTaGCCTTTCATATTTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GQVNKKRLLGEGPWVGDLAFLMS*PFIFRS
Trigger: ACTCCGAAATATGAAAGGCAAAGACATCAAGAAAGC...CAGGTCACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGGATATGATGTTGAGCTaGCTGTTGATGATCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LEGAGEQEEAPWRGALGRDMMLS*LLMIWL
Trigger: TAGCCAGATCATCAACAGCAAGCTCAACATCATATC...CCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGCTTTTCCTCAGGGACTaGGCATACTTCTTCACCCCT +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWLFLRD*AYFFTP
Trigger: AGGGGTGAAGAAGTATGCCAAGTCCCTGAGGAAAAG...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 90 bp CTCTATTCCCCAGTCTTTCTCTATGTACTTCAAAGAGATCTTCTGTaGCTGGGCACAGGCATAGATCCGCTCCTGGATGTGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LYSPVFLYVLQRDLL*LGTGIDPLLDVQGC
Trigger: GCAGCCCTGCACATCCAGGAGCGGATCTATGCCTGTGCCCAGCCACAGAAGATCTCTTTGAAGTACATAGAGAAAGACTGGGGAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGTGGAGGAGGACATCTTaGTCTAGTGTTACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWWRRTS*SSVTVC
Trigger: GCACACAGTAACACTAGACAAAGATGTCCTCCTCCA...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGTCGGTGCTTTCTTGATGTCTTaGCCTTTCATATTTCGGAGT +
Preference number: 5 (lower is better)
Translates to: WKGQVNKKRLLGEGPWVGAFLMS*PFIFRS
Trigger: ACTCCGAAATATGAAAGGCAAAGACATCAAGAAAGC...ACCGACCCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGATGTTGAGCTTGCTGTaGATGATCTGGCTAATCCCG +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWMLSLL*MIWLIP
Trigger: CGGGATTAGCCAGATCATCAACAGCAAGCTCAACAT...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGCACCTTCACGGGGTaGCTCTTCAGCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRCTFTG*LFSRAR
Trigger: GCGGGCCCGGCTGAAGAGCAACCCCGTGAAGGTGCA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp AAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCTCCTTGGAGAGGGGCCTTGGGATATGATGTTGAGCTaGCTGTTGATGATCTGGCTA +
Preference number: 5 (lower is better)
Translates to: KHWKGQVNKKRLLGEGPWDMMLS*LLMIWL
Trigger: TAGCCAGATCATCAACAGCAAGCTCAACATCATATC...CCAAGGCCCCTCTCCAAGGAGCCTCTTCTTGTTCACCTGCCCCTTCCAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGCAACCCCAAGGCCTaGGTCTCCAGGAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSNPKA*VSRRPG
Trigger: GCCAGGCCTCCTGGAGACCAAGGCCTTGGGGTTGCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGAGGTCCAGGGGGTCCTaGGGCACAAAGCTCACCCTG +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRRSRGS*GTKLTL
Trigger: CAGGGTGAGCTTTGTGCCCAAGGACCCCCTGGACCT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCTCGGCTCTCTGTGTaGGCTGAGTCCGATGCCTCC +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPRLSV*AESDAS
Trigger: GGAGGCATCGGACTCAGCCAACACAGAGAGCCGAGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 90 bp AGTTGCACTTCATCTCCACAGCAAAGCGCTCCTGGAGTACATCACTaGAGCTCTGAAGGTAGAGATATTCAAATGCCACAGGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCTSSPQQSAPGVHH*SSEGRDIQMPQGLL
Trigger: AAGAAGACCCTGTGGCATTTGAATATCTCTACCTTCAGAGCTGCAGTGATGTACTCCAGGAGCGCTTTGCTGTGGAGATGAAGTGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGGCTAATCCCGTACTaGGCCCCAACCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRWLIPY*APTRRA
Trigger: TGCCCTCCTGGTTGGGGCCAAGTACGGGATTAGCCA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTGGTCTCGAGGCCCTTaGAGAAGCCTGGTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRWSRGP*RSLVGQ
Trigger: TTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTTGGACCTCTTCTGGTaGCCTCAGGTGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRLDLFW*PQVWGC
Trigger: ACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGCCTGCTGTTTTCCTCTaGGCTGTTGGTCTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRPAVFL*AVGLEA
Trigger: GGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAGG...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGGCTGGATTTGTGCTCTaGGTCTCCCTCAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRAGFVL*VSLKEA
Trigger: GGCTTCCTTGAGGGAGACCAAGAGCACAAATCCAGC...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTCCTGGAGGCTGGATTaGTGCTCTTGGTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRSWRLD*CSWSPS
Trigger: TGAGGGAGACCAAGAGCACAAATCCAGCCTCCAGGA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGACAGGATTCTCTGTGTaGCTGGGGTCAATTCGGAGG +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRTGFSV*LGSIRR
Trigger: CCTCCGAATTGACCCCAGCAACACAGAGAATCCTGT...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS-3UTR CAA 90 bp TATTTGAATACTCTATGTAGTAAACATTGGAAGGGGCAGGTGAACAAGAAGAGGTTCTCCAGGTACACCTaGAGCACGTTGGGCATACAA +
Preference number: 5 (lower is better)
Translates to: YLNTLCSKHWKGQVNKKRFSRYT*STLGIQ
Trigger: TTGTATGCCCAACGTGCTCAAGGTGTACCTGGAGAA...CCTCTTCTTGTTCACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GCGGGGGCAGTGCGGGCAGGCCCAGGGATTCCAGCATaGAGCCAGACTGAGCCTCCATCCAGCCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: AGAVRAGPGIPA*SQTEPPSSPAG
Trigger: GCCAGCAGGGCTGGATGGAGGCTCAGTCTGGCTCCATGCTGGAATCCCTGGGCCTGCCCGCACTGCCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp GGGAGGTGCAGCTCCCTGCCGGGAAGCTGTGCTCTCTaGGCCCGAGTCACTCAGGTGGCTGCCTGGGGAGAT +
Preference number: 6 (lower is better)
Translates to: GRCSSLPGSCAL*ARVTQVAAWGD
Trigger: ATCTCCCCAGGCAGCCACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGGGAGCTGCACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp ACCACTGGGGAGGTGCAGCTCCCTGCCGGGAAGCTGTaGTCTCTGAGCCCGAGTCACTCAGGTGGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: TTGEVQLPAGKL*SLSPSHSGGCL
Trigger: CAGGCAGCCACCTGAGTGACTCGGGCTCAGAGAGCACAGCTTCCCGGCAGGGAGCTGCACCTCCCCAGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CTTCCCTGTGCCGGGTGGAGCAGCGGCTACAGTCTGTaGACTGGAAGCAGAGGCCGGCCAGCTGGACCAGGT +
Preference number: 6 (lower is better)
Translates to: LPCAGWSSGYSL*TGSRGRPAGPG
Trigger: ACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCACAGACTGTAGCCGCTGCTCCACCCGGCACAGGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp CCAGGGCGTCCATGGACTCACTGGACCCGCTGGTCCTaGAGCCTCGGCTCTCTGTGTTGGCTGAGTCCGATG +
Preference number: 6 (lower is better)
Translates to: PGRPWTHWTRWS*SLGSLCWLSPM
Trigger: CATCGGACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GGTCTAGCCTGCCCATGCTCAGTTCTGGTCCCCAGCTaGAGGCCTCCGAAGCAAGGCCCTGGGGACCGTCTA +
Preference number: 6 (lower is better)
Translates to: GLACPCSVLVPS*RPPKQGPGDRL
Trigger: TAGACGGTCCCCAGGGCCTTGCTTCGGAGGCCTGCAGCTGGGGACCAGAACTGAGCATGGGCAGGCTAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp CTGGCCAGATGTGGCTTTTCCTGGATAGGGGTGTGGTaGAGCTGTAGGCACGGGCTGCCCTCCAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LARCGFSWIGVW*SCRHGLPSRAG
Trigger: CCCTGCCCTGGAGGGCAGCCCGTGCCTACAGCTGCACCACACCCCTATCCAGGAAAAGCCACATCTGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp CCTCCGATTCAGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTGCTaGGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGTCGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: PPIQHCLSCCWPRRC*DLFWLPQVWGCRQG
Trigger: CCCCTGGCGACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GGGGCTGTCGCCAGGGGGCTGCTCCTCTCTAGCAAATaGTCTGCAGAGGCTCAGCTTCACCAGGCATCGGTC +
Preference number: 6 (lower is better)
Translates to: GAVARGLLLSSK*SAEAQLHQASV
Trigger: GACCGATGCCTGGTGAAGCTGAGCCTCTGCAGACCATTTGCTAGAGAGGAGCAGCCCCCTGGCGACAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CCTCTTCCAGGGCGTCCATGGACTCACTGGACCCGCTaGTCCTGCAGCCTCGGCTCTCTGTGTTGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: PLPGRPWTHWTR*SCSLGSLCWLS
Trigger: ACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp AGCACGCATCTAAGTCGTCCTCTTCCAGGGCGTCCATaGACTCACTGGACCCGCTGGTCCTGCAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: STHLSRPLPGRP*THWTRWSCSLG
Trigger: GCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACGACTTAGATGCGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GTGAACTGGAAGCAGAGGCCGGCCAGCTGGACCAGGTaGTGGAAAGTGACCCGCACAGCACCTTGCATCTCC +
Preference number: 6 (lower is better)
Translates to: VNWKQRPASWTR*WKVTRTAPCIS
Trigger: GGAGATGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp TATACCACGTCCCTCAGGTTCCCGGCCACTTCCCTGTaGCGGGTGGAGCAGCGGCTACAGTCTGTGAACTGG +
Preference number: 6 (lower is better)
Translates to: YTTSLRFPATSL*RVEQRLQSVNW
Trigger: CCAGTTCACAGACTGTAGCCGCTGCTCCACCCGGCACAGGGAAGTGGCCGGGAACCTGAGGGACGTGGTATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GATACCCGGTGCGTCGGCCGTCTGTTTCCAGACCAGTaGAAGACGGAGTTGGCCGGGTCCACAAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: DTRCVGRLFPDQ*KTELAGSTNSL
Trigger: CAGGCTGTTTGTGGACCCGGCCAACTCCGTCTTCCACTGGTCTGGAAACAGACGGCCGACGCACCGGGTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CCACTTCAGAGGACTCCTCCGAGTCACTGCAGGCCCTaGACTCGTAGCCTTCTTCAGCGGATACCCGGTGCG +
Preference number: 6 (lower is better)
Translates to: PLQRTPPSHCRP*TRSLLQRIPGA
Trigger: CGCACCGGGTATCCGCTGAAGAAGGCTACGAGTCCAGGGCCTGCAGTGACTCGGAGGAGTCCTCTGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp AGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTGCTTaGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: STVCHAAGPAGA*TSSGCLRCGAV
Trigger: GACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CTAAGTCGTCCTCTTCCAGGGCGTCCATGGACTCACTaGACCCGCTGGTCCTGCAGCCTCGGCTCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LSRPLPGRPWTH*TRWSCSLGSLC
Trigger: ACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCATGGACGCCCTGGAAGAGGACGACTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp AGGCCTGACTTGAGCAGCCTGTGGGCTGGAAGAACCTaGGTTGGAGTGATGGGGGCTGTGAGGGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: RPDLSSLWAGRT*VGVMGAVRDAG
Trigger: GCCAGCATCCCTCACAGCCCCCATCACTCCAACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp ACTCTGGCCAGATGTGGCTTTTCCTGGATAGGGGTGTaGTGCAGCTGTAGGCACGGGCTGCCCTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: TLARCGFSWIGV*CSCRHGLPSRA
Trigger: TGCCCTGGAGGGCAGCCCGTGCCTACAGCTGCACCACACCCCTATCCAGGAAAAGCCACATCTGGCCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp GCCACAGGGTCTTCTTTCAGCAGGTCCAGGGGGTCCTaGGGCACAAAGCTCACCCTGAAGAGGCAGCGGGAG +
Preference number: 6 (lower is better)
Translates to: ATGSSFSRSRGS*GTKLTLKRQRE
Trigger: CTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGCCCAAGGACCCCCTGGACCTGCTGAAAGAAGACCCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp CAGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTGCTaGGACCTCTTCTGGTTGCCTCAGGTGTGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: QHCLSCCWPRRC*DLFWLPQVWGC
Trigger: ACAGCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CCCGGAACTTCTGGGTCAAACAGAATACAGCGGCTGTaGGGGCCGTGCACTGGCGGGCCAAGAGTTTCACGC +
Preference number: 6 (lower is better)
Translates to: PGTSGSNRIQRL*GPCTGGPRVSR
Trigger: GCGTGAAACTCTTGGCCCGCCAGTGCACGGCCCTCACAGCCGCTGTATTCTGTTTGACCCAGAAGTTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GGCACAGGCATAGATCCGCTCCTGGATGTGCAGGGCTaGAAGCCGGAGGGCAGAGTTGCACTTCATCTCCAC +
Preference number: 6 (lower is better)
Translates to: GTGIDPLLDVQG*KPEGRVALHLH
Trigger: GTGGAGATGAAGTGCAACTCTGCCCTCCGGCTTGCAGCCCTGCACATCCAGGAGCGGATCTATGCCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp ATTCAGCACTGTCTGTCATGCTGCTGGCCCCGCAGGTaGTTGGACCTCTTCTGGTTGCCTCAGGTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: IQHCLSCCWPRR*LDLFWLPQVWG
Trigger: GCCCCACACCTGAGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp CTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATaGTGCTGGCCCCGCAGGTGCTTGGACCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LSPMPPIQHCLS*CWPRRCLDLFW
Trigger: CCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CCGATGCCTCCGATTCAGCACTGTCTGTCATGCTGCTaGCCCCGCAGGTGCTTGGACCTCTTCTGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: PMPPIQHCLSCC*PRRCLDLFWLP
Trigger: AGGCAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp AGCCTGGTGGGCCAAAGTGGAAGAAGCTGGTCCCGCTaGAGGAGCACGCATCTAAGTCGTCCTCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SLVGQSGRSWSR*RSTHLSRPLPG
Trigger: CCCTGGAAGAGGACGACTTAGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GTCTCGAGGCCCTTTGAGAAGCCTGGTGGGCCAAAGTaGAAGAAGCTGGTCCCGCTGGAGGAGCACGCATCT +
Preference number: 6 (lower is better)
Translates to: VSRPFEKPGGPK*KKLVPLEEHAS
Trigger: AGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GAGGTGACCCTGCTGAGACTGGTGGAGCCTTCGGGATaGCTCTCTGGGGCAAAGCACAGGAACGACCTCTCA +
Preference number: 6 (lower is better)
Translates to: EVTLLRLVEPSG*LSGAKHRNDLS
Trigger: TGAGAGGTCGTTCCTGTGCTTTGCCCCAGAGAGCCATCCCGAAGGCTCCACCAGTCTCAGCAGGGTCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CTACAGTCTGTGAACTGGAAGCAGAGGCCGGCCAGCTaGACCAGGTGCTGGAAAGTGACCCGCACAGCACCT +
Preference number: 6 (lower is better)
Translates to: LQSVNWKQRPAS*TRCWKVTRTAP
Trigger: AGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCAGCTGGCCGGCCTCTGCTTCCAGTTCACAGACTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp ATGGACTCACTGGACCCGCTGGTCCTGCAGCCTCGGCTCTCTGTGTaGGCTGAGTCCGATGCCTCCGATTCAGCACTGTCTGTCATGCTG +
Preference number: 6 (lower is better)
Translates to: MDSLDPLVLQPRLSV*AESDASDSALSVML
Trigger: CAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACTCAGCCAACACAGAGAGCCGAGGCTGCAGGACCAGCGGGTCCAGTGAGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CATCTTTGTCTAGTGTTACTGTGTGCCTCACTGGCGTaGGTGCCTGGGCTGGGTTCCCGGGTGGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: HLCLVLLCASLA*VPGLGSRVAHQ
Trigger: CTGATGGGCCACCCGGGAACCCAGCCCAGGCACTCACGCCAGTGAGGCACACAGTAACACTAGACAAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS TCA 72 bp CTTCAGCCGGGCCCGCTTCTCCTCAGTCAAGAAGGATaGCTTGGGGACTCCCGATGTGCAGCGGACAACTGT +
Preference number: 6 (lower is better)
Translates to: LQPGPLLLSQEG*LGDSRCAADNC
Trigger: ACAGTTGTCCGCTGCACATCGGGAGTCCCCAAGTCATCCTTCTTGACTGAGGAGAAGCGGGCCCGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS TCA 72 bp GAAGCAAGGCCCTGGGGACCGTCTATCTTCTGGCACTaGGGGTTGGCATTCTGGCCCAGGTCCAGCAAACAC +
Preference number: 6 (lower is better)
Translates to: EARPWGPSIFWH*GLAFWPRSSKH
Trigger: GTGTTTGCTGGACCTGGGCCAGAATGCCAACCCTCAGTGCCAGAAGATAGACGGTCCCCAGGGCCTTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp AGTCCGATGCCTCCGATTCAGCACTGTCTGTCATGCTaGTGGCCCCGCAGGTGCTTGGACCTCTTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SPMPPIQHCLSC*WPRRCLDLFWL
Trigger: CAACCAGAAGAGGTCCAAGCACCTGCGGGGCCAGCAGCATGACAGACAGTGCTGAATCGGAGGCATCGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp ACGGGGACGGAGTCTTCCCCGATCACGCGGTCAAGCTaGTCTGCCTTTATTGTCTCTGGCGGGAAGGCTGAT +
Preference number: 6 (lower is better)
Translates to: TGTESSPITRSS*SAFIVSGGKAD
Trigger: ATCAGCCTTCCCGCCAGAGACAATAAAGGCAGAGCAGCTTGACCGCGTGATCGGGGAAGACTCCGTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GGGATGGTACTGTATGGACACAGACCTGCTGAGAAGTaGTCACGGGGACGGAGTCTTCCCCGATCACGCGGT +
Preference number: 6 (lower is better)
Translates to: GMVLYGHRPAEK*SRGRSLPRSRG
Trigger: ACCGCGTGATCGGGGAAGACTCCGTCCCCGTGAGCACTTCTCAGCAGGTCTGTGTCCATACAGTACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GGCACAAAGCTCACCCTGAAGAGGCAGCGGGAGTCCTaGGATTCTTCCCTTTCTACCACCTGCTGGACCAGC +
Preference number: 6 (lower is better)
Translates to: GTKLTLKRQRES*DSSLSTTCWTS
Trigger: GCTGGTCCAGCAGGTGGTAGAAAGGGAAGAATCCCAGGACTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp TCGGCCGTCTGTTTCCAGACCAGTGGAAGACGGAGTTaGCCGGGTCCACAAACAGCCTGTAGTACCCAGCGA +
Preference number: 6 (lower is better)
Translates to: SAVCFQTSGRRS*PGPQTACSTQR
Trigger: TCGCTGGGTACTACAGGCTGTTTGTGGACCCGGCCAACTCCGTCTTCCACTGGTCTGGAAACAGACGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GGTTATAGTAGTCAGTCCGGCTGCCCTCATACAGCCTaGGGTCTAGCCTGCCCATGCTCAGTTCTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: GYSSQSGCPHTA*GLACPCSVLVP
Trigger: GGGGACCAGAACTGAGCATGGGCAGGCTAGACCCCAGGCTGTATGAGGGCAGCCGGACTGACTACTATAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp AGCCCGAGTCACTCAGGTGGCTGCCTGGGGAGATGCTaGAACACAGGTTATAGTAGTCAGTCCGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: SPSHSGGCLGRC*NTGYSSQSGCP
Trigger: AGGGCAGCCGGACTGACTACTATAACCTGTGTTCCAGCATCTCCCCAGGCAGCCACCTGAGTGACTCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp CTCGGGCTGAGCTGTCCCTGGAGCGCCGAAGCCACCTaGCCACCATCTGTTCTATTCTGTGTGCTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: LGLSCPWSAEAT*PPSVLFCVLSE
Trigger: CTCGGAAAGCACACAGAATAGAACAGATGGTGGCAAGGTGGCTTCGGCGCTCCAGGGACAGCTCAGCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS CAA 90 bp TCTCGACCCTGCTGTTTTCCTCTTGGCTGTTGGTCTCGAGGCCCTTaGAGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTGGTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: SRPCCFPLGCWSRGP*RSLVGQSGRSWSRW
Trigger: CCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAGGGTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GTCTCTGGCTCCATCTCCATGATCCTGGAGGCTGGATTTGTGCTCTaGGTCTCCCTCAAGGAAGCCAGCAACCCCAAGGCCTTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: VSGSISMILEAGFVL*VSLKEASNPKALVS
Trigger: GGAGACCAAGGCCTTGGGGTTGCTGGCTTCCTTGAGGGAGACCAAGAGCACAAATCCAGCCTCCAGGATCATGGAGATGGAGCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GGTCCAGCAAACACAGGAAGCCACTGGTCTCGACCCTaGTGTTTTCCTCTTGGCTGTTGGTCTCGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: GPANTGSHWSRP*CFPLGCWSRGP
Trigger: AGGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCAGGGTCGAGACCAGTGGCTTCCTGTGTTTGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GTTTGTCAGCTGCATCATAGTATTCCTCATCTGAGCTaGCACCCTCAAAGGCCAGCGGGGGCAGTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: VCQLHHSIPHLS*HPQRPAGAVRA
Trigger: TGCCCGCACTGCCCCCGCTGGCCTTTGAGGGTGGCAGCTCAGATGAGGAATACTATGATGCAGCTGACAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp TGGACCAGGTGCTGGAAAGTGACCCGCACAGCACCTTaGATCTCCTCGGGGGATTGGTCCATTCTGATCACG +
Preference number: 6 (lower is better)
Translates to: WTRCWKVTRTAP*ISSGDWSILIT
Trigger: CGTGATCAGAATGGACCAATCCCCCGAGGAGATGCAAGGTGCTGTGCGGGTCACTTTCCAGCACCTGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CCTTTGAGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTaGTCCCGCTGGAGGAGCACGCATCTAAGTCGTCCT +
Preference number: 6 (lower is better)
Translates to: PLRSLVGQSGRS*SRWRSTHLSRP
Trigger: AGGACGACTTAGATGCGTGCTCCTCCAGCGGGACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp TATTCAAATGCCACAGGGTCTTCTTTCAGCAGGTCCAGGGGGTCCTaGGGCACAAAGCTCACCCTGAAGAGGCAGCGGGAGTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: YSNATGSSFSRSRGS*GTKLTLKRQRESWD
Trigger: ATCCCAGGACTCCCGCTGCCTCTTCAGGGTGAGCTTTGTGCCCAAGGACCCCCTGGACCTGCTGAAAGAAGACCCTGTGGCATTTGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GCCACCTGGGTCTTGATCTGGAGATACGATTGGAAAAGGCCTGACTaGAGCAGCCTGTGGGCTGGAAGAACCTGGGTTGGAGTGATGGGG +
Preference number: 6 (lower is better)
Translates to: ATWVLIWRYDWKRPD*SSLWAGRTWVGVMG
Trigger: CCCCATCACTCCAACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GGACGGAGTCTTCCCCGATCACGCGGTCAAGCTGCTCTGCCTTTATaGTCTCTGGCGGGAAGGCTGATGGAAGTAAGAAATCAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: GRSLPRSRGQAALPL*SLAGRLMEVRNQGP
Trigger: TGGCCCCTGATTTCTTACTTCCATCAGCCTTCCCGCCAGAGACAATAAAGGCAGAGCAGCTTGACCGCGTGATCGGGGAAGACTCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CGTGAGTTTGTCAGCTGCATCATAGTATTCCTCATCTaGGCTGCCACCCTCAAAGGCCAGCGGGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: REFVSCIIVFLI*AATLKGQRGQC
Trigger: GCACTGCCCCCGCTGGCCTTTGAGGGTGGCAGCTCAGATGAGGAATACTATGATGCAGCTGACAAACTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp GGCTGTGAGGGATGCTGGCTGAGGAGCCATCTGTGGTaGCAGGATTCTCTGTGTTGCTGGGGTCAATTCGGA +
Preference number: 6 (lower is better)
Translates to: GCEGCWLRSHLW*QDSLCCWGQFG
Trigger: TCCGAATTGACCCCAGCAACACAGAGAATCCTGTCACCACAGATGGCTCCTCAGCCAGCATCCCTCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp TTTGGCAGGGATGGTACTGTATGGACACAGACCTGCTaGGAAGTGCTCACGGGGACGGAGTCTTCCCCGATC +
Preference number: 6 (lower is better)
Translates to: FGRDGTVWTQTC*EVLTGTESSPI
Trigger: GATCGGGGAAGACTCCGTCCCCGTGAGCACTTCTCAGCAGGTCTGTGTCCATACAGTACCATCCCTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp TTCTGGAGGAGGACATCTTTGTCTAGTGTTACTGTGTaGCTCACTGGCGTGAGTGCCTGGGCTGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: FWRRTSLSSVTV*LTGVSAWAGFP
Trigger: CGGGAACCCAGCCCAGGCACTCACGCCAGTGAGGCACACAGTAACACTAGACAAAGATGTCCTCCTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS GCA 72 bp CAGCGGGAGTCCTGGGATTCTTCCCTTTCTACCACCTaGTGGACCAGCTCTTCCTCATGCAGAAGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: QRESWDSSLSTT*WTSSSSCRRCR
Trigger: CCTACACCTTCTGCATGAGGAAGAGCTGGTCCAGCAGGTGGTAGAAAGGGAAGAATCCCAGGACTCCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp GGCCCCGGAAGCATGTGGCATAGGAAAACTGACATCTaGAGTGTTCTATGCCAATCTCCGCGGGCGCCACTT +
Preference number: 6 (lower is better)
Translates to: GPGSMWHRKTDI*SVLCQSPRAPL
Trigger: AAGTGGCGCCCGCGGAGATTGGCATAGAACACTGCAGATGTCAGTTTTCCTATGCCACATGCTTCCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TCCATCTCCATGATCCTGGAGGCTGGATTTGTGCTCTaGGTCTCCCTCAAGGAAGCCAGCAACCCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: SISMILEAGFVL*VSLKEASNPKA
Trigger: GGCCTTGGGGTTGCTGGCTTCCTTGAGGGAGACCAAGAGCACAAATCCAGCCTCCAGGATCATGGAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp CTCAGGCTCTGCAGTGAGTTCTTTGGGGGTGGTGCCACCTGGGTCTaGATCTGGAGATACGATTGGAAAAGGCCTGACTTGAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LRLCSEFFGGGATWV*IWRYDWKRPDLSSL
Trigger: CAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAGGTGGCACCACCCCCAAAGAACTCACTGCAGAGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GTCATGGTAGCCTCTCTCACAGGTGAGTTTCGCAGCCTCCACAAATaGGTGGTAGGTGTATACCACGTCCCTCAGGTTCCCGGCCACTTC +
Preference number: 6 (lower is better)
Translates to: VMVASLTGEFRSLHK*VVGVYHVPQVPGHF
Trigger: GAAGTGGCCGGGAACCTGAGGGACGTGGTATACACCTACCACCAATTTGTGGAGGCTGCGAAACTCACCTGTGAGAGAGGCTACCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp GCTGTTTTCCTCTTGGCTGTTGGTCTCGAGGCCCTTTaGGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: AVFLLAVGLEAL*EAWWAKVEEAG
Trigger: ACCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCAACAGCCAAGAGGAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CGGCAGCTCTGGGCCCTGAGAGTGTGTCTGGTGGCGTaGGTTTGTCAGCTGCATCATAGTATTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: RQLWALRVCLVA*VCQLHHSIPHL
Trigger: CAGATGAGGAATACTATGATGCAGCTGACAAACTCACGCCACCAGACACACTCTCAGGGCCCAGAGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp TCTGACCGCACCTCTCCCAGCTCTGATGTGTCTCCTTaGGAGACGTGGTGTGGCCCTGGGTTATCTGGATTA +
Preference number: 6 (lower is better)
Translates to: SDRTSPSSDVSP*ETWCGPGLSGL
Trigger: TAATCCAGATAACCCAGGGCCACACCACGTCTCTCAAGGAGACACATCAGAGCTGGGAGAGGTGCGGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TGCTGTTTTCCTCTTGGCTGTTGGTCTCGAGGCCCTTaGAGAAGCCTGGTGGGCCAAAGTGGAAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: CCFPLGCWSRGP*RSLVGQSGRSW
Trigger: CCAGCTTCTTCCACTTTGGCCCACCAGGCTTCTCAAAGGGCCTCGAGACCAACAGCCAAGAGGAAAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp CTGCCGAGCGAGGCTCTTCTTGACACGGTGAAAGCTTaGGCAGGGATGGTACTGTATGGACACAGACCTGCT +
Preference number: 6 (lower is better)
Translates to: LPSEALLDTVKA*AGMVLYGHRPA
Trigger: AGCAGGTCTGTGTCCATACAGTACCATCCCTGCCAAAGCTTTCACCGTGTCAAGAAGAGCCTCGCTCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TCAGGCGGTAGGCAAATGATAGGACTGTCGTCACCTTaGCTCTCTGCTGGTGAGCCATGGCCTGAATCTGCC +
Preference number: 6 (lower is better)
Translates to: SGGRQMIGLSSP*LSAGEPWPESA
Trigger: GGCAGATTCAGGCCATGGCTCACCAGCAGAGAGCAAAGGTGACGACAGTCCTATCATTTGCCTACCGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp GCCTCTCTCACAGGTGAGTTTCGCAGCCTCCACAAATaGGTGGTAGGTGTATACCACGTCCCTCAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: ASLTGEFRSLHK*VVGVYHVPQVP
Trigger: GGGAACCTGAGGGACGTGGTATACACCTACCACCAATTTGTGGAGGCTGCGAAACTCACCTGTGAGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp TTGCTCTTCAGCCGGGCCCGCTTCTCCTCAGTCAAGAAGGATGACTaGGGGACTCCCGATGTGCAGCGGACAACTGTAATTGAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: LLFSRARFSSVKKDD*GTPDVQRTTVIERA
Trigger: TGCTCTTTCAATTACAGTTGTCCGCTGCACATCGGGAGTCCCCAAGTCATCCTTCTTGACTGAGGAGAAGCGGGCCCGGCTGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS CAA 90 bp CGGCTGATGTTGGCGAACTCTGCCAGCGTGGATATGATGTTGAGCTaGCTGTTGATGATCTGGCTAATCCCGTACTTGGCCCCAACCAGG +
Preference number: 6 (lower is better)
Translates to: RLMLANSASVDMMLS*LLMIWLIPYLAPTR
Trigger: CCTGGTTGGGGCCAAGTACGGGATTAGCCAGATCATCAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTTCGCCAACATCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp TCCACGCGGCTGATGTTGGCGAACTCTGCCAGCGTGGATATGATGTaGAGCTTGCTGTTGATGATCTGGCTAATCCCGTACTTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: STRLMLANSASVDMM*SLLLMIWLIPYLAP
Trigger: TGGGGCCAAGTACGGGATTAGCCAGATCATCAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTTCGCCAACATCAGCCGCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GGGATGCTGGCTGAGGAGCCATCTGTGGTGACAGGATTCTCTGTGTaGCTGGGGTCAATTCGGAGGCGAATGGCAGAGATAGAAGACACT +
Preference number: 6 (lower is better)
Translates to: GMLAEEPSVVTGFSV*LGSIRRRMAEIEDT
Trigger: AGTGTCTTCTATCTCTGCCATTCGCCTCCGAATTGACCCCAGCAACACAGAGAATCCTGTCACCACAGATGGCTCCTCAGCCAGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp GCATACAAAGCAGAGAGTTCCCCTGACTGTGCCCACTaGCCAGTACTTCCTCAGCAAAGTGCACCTTCACGG +
Preference number: 6 (lower is better)
Translates to: AYKAESSPDCAH*PVLPQQSAPSR
Trigger: CCGTGAAGGTGCACTTTGCTGAGGAAGTACTGGTCAGTGGGCACAGTCAGGGGAACTCTCTGCTTTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS TCA 72 bp CTGGGTCTTGATCTGGAGATACGATTGGAAAAGGCCTaGCTTGAGCAGCCTGTGGGCTGGAAGAACCTGGGT +
Preference number: 6 (lower is better)
Translates to: LGLDLEIRLEKA*LEQPVGWKNLG
Trigger: ACCCAGGTTCTTCCAGCCCACAGGCTGCTCAAGTCAGGCCTTTTCCAATCGTATCTCCAGATCAAGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp ATCTCCTCGGGGGATTGGTCCATTCTGATCACGTGTTaGCAGCTGGCTAGGAGCTTCTGTGAGCCCATGCAT +
Preference number: 6 (lower is better)
Translates to: ISSGDWSILITC*QLARSFCEPMH
Trigger: ATGCATGGGCTCACAGAAGCTCCTAGCCAGCTGTCAACACGTGATCAGAATGGACCAATCCCCCGAGGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp GTCTCCTTGAGAGACGTGGTGTGGCCCTGGGTTATCTaGATTAGGGTGATCACTAGAGAGAGGGAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: VSLRDVVWPWVI*IRVITREREGA
Trigger: AGCACCTTCCCTCTCTCTAGTGATCACCCTAATCCAGATAACCCAGGGCCACACCACGTCTCTCAAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TTCTCAGACTCTTCTGTCAGCTCCACGCGGCTGATGTaGGCGAACTCTGCCAGCGTGGATATGATGTTGAGC +
Preference number: 6 (lower is better)
Translates to: FSDSSVSSTRLM*ANSASVDMMLS
Trigger: GCTCAACATCATATCCACGCTGGCAGAGTTCGCCAACATCAGCCGCGTGGAGCTGACAGAAGAGTCTGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp GCTGAGGAGCCATCTGTGGTGACAGGATTCTCTGTGTaGCTGGGGTCAATTCGGAGGCGAATGGCAGAGATA +
Preference number: 6 (lower is better)
Translates to: AEEPSVVTGFSV*LGSIRRRMAEI
Trigger: TATCTCTGCCATTCGCCTCCGAATTGACCCCAGCAACACAGAGAATCCTGTCACCACAGATGGCTCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp TTGAGCACGTTGGGCATACAAAGCAGAGAGTTCCCCTaGCTGTGCCCACTGACCAGTACTTCCTCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: LSTLGIQSREFP*LCPLTSTSSAK
Trigger: CTTTGCTGAGGAAGTACTGGTCAGTGGGCACAGTCAGGGGAACTCTCTGCTTTGTATGCCCAACGTGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS CCA 72 bp CCCTTGGAATCACCCAGGTCCTTCCCAGATCCCTTCTaGAATAGGCTAGGGCCATTTCTGTGCATAACTTCC +
Preference number: 6 (lower is better)
Translates to: PLESPRSFPDPF*NRLGPFLCITS
Trigger: GGAAGTTATGCACAGAAATGGCCCTAGCCTATTCCAGAAGGGATCTGGGAAGGACCTGGGTGATTCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CAAGGGCTTGTGGGACATTATCTAACCTGTCACCCTTaGAATCACCCAGGTCCTTCCCAGATCCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: QGLVGHYLTCHP*NHPGPSQIPSG
Trigger: TCCAGAAGGGATCTGGGAAGGACCTGGGTGATTCCAAGGGTGACAGGTTAGATAATGTCCCACAAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TCAAGGGCTTGTGGGACATTATCTAACCTGTCACCCTaGGAATCACCCAGGTCCTTCCCAGATCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SRACGTLSNLSP*ESPRSFPDPFW
Trigger: CCAGAAGGGATCTGGGAAGGACCTGGGTGATTCCAAGGGTGACAGGTTAGATAATGTCCCACAAGCCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp ATGCTCACTTTCTCAGACTCTTCTGTCAGCTCCACGCGGCTGATGTaGGCGAACTCTGCCAGCGTGGATATGATGTTGAGCTTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: MLTFSDSSVSSTRLM*ANSASVDMMLSLLL
Trigger: CAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTTCGCCAACATCAGCCGCGTGGAGCTGACAGAAGAGTCTGAGAAAGTGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp GCTCTAACGTCAAGGGCTTGTGGGACATTATCTAACCTGTCACCCTaGGAATCACCCAGGTCCTTCCCAGATCCCTTCTGGAATAGGCTA +
Preference number: 6 (lower is better)
Translates to: ALTSRACGTLSNLSP*ESPRSFPDPFWNRL
Trigger: TAGCCTATTCCAGAAGGGATCTGGGAAGGACCTGGGTGATTCCAAGGGTGACAGGTTAGATAATGTCCCACAAGCCCTTGACGTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS GCA 72 bp ATGTGGCATAGGAAAACTGACATCTGCAGTGTTCTATaGCAATCTCCGCGGGCGCCACTTCGTTTATGCCAG +
Preference number: 6 (lower is better)
Translates to: MWHRKTDICSVL*QSPRAPLRLCQ
Trigger: CTGGCATAAACGAAGTGGCGCCCGCGGAGATTGGCATAGAACACTGCAGATGTCAGTTTTCCTATGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TTGAAAGCTTTGGTCTGTCCGTTCTCCAGGTACACCTaGAGCACGTTGGGCATACAAAGCAGAGAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: LKALVCPFSRYT*STLGIQSREFP
Trigger: GGGGAACTCTCTGCTTTGTATGCCCAACGTGCTCAAGGTGTACCTGGAGAACGGACAGACCAAAGCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp AACTCTGCCAGCGTGGATATGATGTTGAGCTTGCTGTaGATGATCTGGCTAATCCCGTACTTGGCCCCAACC +
Preference number: 6 (lower is better)
Translates to: NSASVDMMLSLL*MIWLIPYLAPT
Trigger: GGTTGGGGCCAAGTACGGGATTAGCCAGATCATCAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TTGGCGAACTCTGCCAGCGTGGATATGATGTTGAGCTaGCTGTTGATGATCTGGCTAATCCCGTACTTGGCC +
Preference number: 6 (lower is better)
Translates to: LANSASVDMMLS*LLMIWLIPYLA
Trigger: GGCCAAGTACGGGATTAGCCAGATCATCAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTTCGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CCA 72 bp CCAGTCTTTCTCTATGTACTTCAAAGAGATCTTCTGTaGCTGGGCACAGGCATAGATCCGCTCCTGGATGTG +
Preference number: 6 (lower is better)
Translates to: PVFLYVLQRDLL*LGTGIDPLLDV
Trigger: CACATCCAGGAGCGGATCTATGCCTGTGCCCAGCCACAGAAGATCTCTTTGAAGTACATAGAGAAAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp CTGATGTTGGCGAACTCTGCCAGCGTGGATATGATGTaGAGCTTGCTGTTGATGATCTGGCTAATCCCGTAC +
Preference number: 6 (lower is better)
Translates to: LMLANSASVDMM*SLLLMIWLIPY
Trigger: GTACGGGATTAGCCAGATCATCAACAGCAAGCTCAACATCATATCCACGCTGGCAGAGTTCGCCAACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS TCA 72 bp CTTGGGGACTCCCGATGTGCAGCGGACAACTGTAATTaGAAGAGCATCTTCAGTTTCCCTGAGAATATCAGC +
Preference number: 6 (lower is better)
Translates to: LGDSRCAADNCN*KSIFSFPENIS
Trigger: GCTGATATTCTCAGGGAAACTGAAGATGCTCTTTCAATTACAGTTGTCCGCTGCACATCGGGAGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8
CDS GCA 72 bp TCATCTCCACAGCAAAGCGCTCCTGGAGTACATCACTaGAGCTCTGAAGGTAGAGATATTCAAATGCCACAG +
Preference number: 6 (lower is better)
Translates to: SSPQQSAPGVHH*SSEGRDIQMPQ
Trigger: CTGTGGCATTTGAATATCTCTACCTTCAGAGCTGCAGTGATGTACTCCAGGAGCGCTTTGCTGTGGAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 90 bp AGGATGATGTCCTTCACAGTTGTGTTTGCCTCAAACTTGAAAGCTTaGGTCTGTCCGTTCTCCAGGTACACCTTGAGCACGTTGGGCATA +
Preference number: 6 (lower is better)
Translates to: RMMSFTVVFASNLKA*VCPFSRYTLSTLGI
Trigger: TATGCCCAACGTGCTCAAGGTGTACCTGGAGAACGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACTGTGAAGGACATCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
CDS CAA 72 bp TTCACAGGAAAGGTCTTCAGCCAGTTCATTGTTCATTaGGAGAATCTGATCACCAGGGAAAAGCTTGCCGTG +
Preference number: 6 (lower is better)
Translates to: FTGKVFSQFIVH*ENLITREKLAV
Trigger: CACGGCAAGCTTTTCCCTGGTGATCAGATTCTCCAAATGAACAATGAACTGGCTGAAGACCTTTCCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044773.12
ENSMUST00000107804.2
ENSMUST00000134280.8