Pregenerated sensors for FRMD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024816Ensembl transcript IDs: ENSMUST00000025728.13
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGCACCCCACCCAGGCCCACAGCATCTGAGACGAGTGTGGCCTaGCCCTGCCTAGGGCTGTGCCTGGTTGTGTCTAGGGCACCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: HSTPPRPTASETSVA*PCLGLCLVVSRAPR Trigger: TCTGGGTGCCCTAGACACAACCAGGCACAGCCCTAGGCAGGGCCAGGCCACACTCGTCTCAGATGCTGTGGGCCTGGGTGGGGTGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 90 bp | CCCACAGCATCTGAGACGAGTGTGGCCTGGCCCTGCCTAGGGCTGTaGCTGGTTGTGTCTAGGGCACCCAGATGTCCTCCTGCTGCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: PTASETSVAWPCLGL*LVVSRAPRCPPAAG Trigger: GCCAGCAGCAGGAGGACATCTGGGTGCCCTAGACACAACCAGGCACAGCCCTAGGCAGGGCCAGGCCACACTCGTCTCAGATGCTGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 90 bp | TTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTaGCTCACGATGCCTGCAGCCCAACAGAAAGAGAGGGCTCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: FRSRRHNWAGPGLKC*LTMPAAQQKERAQL Trigger: CAGCTGAGCCCTCTCTTTCTGTTGGGCTGCAGGCATCGTGAGTCAGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 90 bp | ACCTGCCATCGGAACCGCCAGCAGTCCCTCCAGAGGGAAGACCAGTaGACTTGGGGAAGAGCAGGAGGGCAGCAGGGTTTGTCAGCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TCHRNRQQSLQREDQ*TWGRAGGQQGLSAA Trigger: GGCAGCTGACAAACCCTGCTGCCCTCCTGCTCTTCCCCAAGTGCACTGGTCTTCCCTCTGGAGGGACTGCTGGCGGTTCCGATGGCAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 90 bp | CCAGGGGCTGAGACAGCAGCTTCCGTGGGAACCGGGTGGAACACATaGGGTGACTGTCCTCAAGCCCTGCCCACCTCTGGATTTCCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: PGAETAASVGTGWNT*GDCPQALPTSGFPQ Trigger: TTGGGGAAATCCAGAGGTGGGCAGGGCTTGAGGACAGTCACCTCATGTGTTCCACCCGGTTCCCACGGAAGCTGCTGTCTCAGCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | AGCTGCCAGCCTGGAGCAGAGGAAGAGGCAGGCTGTAGAAAGGGCTaGAGCACAGCTCTACCCACACCAGGCTCAGGGAAGGCTTGGATG | + |
|
Preference number: 1 (lower is better) Translates to: SCQPGAEEEAGCRKG*STALPTPGSGKAWM Trigger: CATCCAAGCCTTCCCTGAGCCTGGTGTGGGTAGAGCTGTGCTCCAGCCCTTTCTACAGCCTGCCTCTTCCTCTGCTCCAGGCTGGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 90 bp | CCACACCAGGCTCAGGGAAGGCTTGGATGTCAGTTTTCCATGGTCTaGAACTCCAGCAGACCCTGCACAGCACCCCACCCAGGCCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: PHQAQGRLGCQFSMV*NSSRPCTAPHPGPQ Trigger: CTGTGGGCCTGGGTGGGGTGCTGTGCAGGGTCTGCTGGAGTTTCAGACCATGGAAAACTGACATCCAAGCCTTCCCTGAGCCTGGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 90 bp | TGGCTTGAGCCGCTGTGGCTGGCCTCAGGGAATCCCACAGTGCAGTaGAATTCGGAGTTGCCACGCCCCAGGCTTTATCAGCTCAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: WLEPLWLASGNPTVQ*NSELPRPRLYQLRA Trigger: TGCTCTGAGCTGATAAAGCCTGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCCACAGCGGCTCAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 90 bp | AGAGGTGGCTTGAGCCGCTGTGGCTGGCCTCAGGGAATCCCACAGTaGAGTGCAATTCGGAGTTGCCACGCCCCAGGCTTTATCAGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: RGGLSRCGWPQGIPQ*SAIRSCHAPGFISS Trigger: TGAGCTGATAAAGCCTGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCCACAGCGGCTCAAGCCACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | ACTAGCTCTTCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGAGCTaGGGACAGATAGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: TSSSQEQSRLPGVQS*GQIGLCDVLRREVA Trigger: AGCCACCTCTCTCCGAAGGACATCGCAAAGGCCTATCTGTCCCCAGCTCTGCACCCCTGGCAGCCTTGACTGCTCCTGGGAAGAGCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | TCTACCCACACCAGGCTCAGGGAAGGCTTGGATGTCAGTTTTCCATaGTCTGAAACTCCAGCAGACCCTGCACAGCACCCCACCCAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: STHTRLREGLDVSFP*SETPADPAQHPTQA Trigger: GGCCTGGGTGGGGTGCTGTGCAGGGTCTGCTGGAGTTTCAGACCATGGAAAACTGACATCCAAGCCTTCCCTGAGCCTGGTGTGGGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 90 bp | CCACAGCTTGCAGTGGGGGAAGTACAGGTTCCTCCCAGACAGAAGTaGGCCCAAGTCTTCCCAGACCTGGTTCCTATGGAGACCTGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PQLAVGEVQVPPRQK*AQVFPDLVPMETWR Trigger: TCTCCAGGTCTCCATAGGAACCAGGTCTGGGAAGACTTGGGCTCACTTCTGTCTGGGAGGAACCTGTACTTCCCCCACTGCAAGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | AAGGGCTGGAGCACAGCTCTACCCACACCAGGCTCAGGGAAGGCTTaGATGTCAGTTTTCCATGGTCTGAAACTCCAGCAGACCCTGCAC | + |
|
Preference number: 1 (lower is better) Translates to: KGWSTALPTPGSGKA*MSVFHGLKLQQTLH Trigger: GTGCAGGGTCTGCTGGAGTTTCAGACCATGGAAAACTGACATCCAAGCCTTCCCTGAGCCTGGTGTGGGTAGAGCTGTGCTCCAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | ATCTCAAAAGTAAGGGACAGGAGCTGGAGAGATGGCTCAGTGCACTaGCTGCTCTTCCAGAGGTCCTGGATTCAATTCCCAGCAACCTCA | + |
|
Preference number: 1 (lower is better) Translates to: ISKVRDRSWRDGSVH*LLFQRSWIQFPATS Trigger: TGAGGTTGCTGGGAATTGAATCCAGGACCTCTGGAAGAGCAGCCAGTGCACTGAGCCATCTCTCCAGCTCCTGTCCCTTACTTTTGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 90 bp | ATTTCTGTGGCTTTCCACCAAGAAGACAAAGCTAAGCTATGTCTCTaGGATCCAGTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: ISVAFHQEDKAKLCL*DPVGIPREYKGLKG Trigger: GCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAGCTTAGCTTTGTCTTCTTGGTGGAAAGCCACAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 90 bp | TCGGTTCCAGTTACCTTAAAGCTATCACCCCAGAACTCAGGAGGCTaGCAGAACCAAGGGTTTAAGGCGAGTATTGGTAACTTATCGAGA | + |
|
Preference number: 1 (lower is better) Translates to: SVPVTLKLSPQNSGG*QNQGFKASIGNLSR Trigger: TCTCGATAAGTTACCAATACTCGCCTTAAACCCTTGGTTCTGTCAGCCTCCTGAGTTCTGGGGTGATAGCTTTAAGGTAACTGGAACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTGAGACGAGTGTGGCCTaGCCCTGCCTAGGGCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RPLRCPSERGGLSRCGWPETSVA*PCLGLC Trigger: GCACAGCCCTAGGCAGGGCCAGGCCACACTCGTCTC...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CAA 90 bp | GCAGTCAAGGCTGCCAGGGGTGCAGAGCTGGGGACAGATAGGCCTTaGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AVKAARGAELGTDRP*RCPSERGGLSRCGW Trigger: CCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCTATCTGTCCCCAGCTCTGCACCCCTGGCAGCCTTGACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGGCCTCAGGGAATCCCACAGTGCAGTGCAATTCGGAGTTGCCACGCCCCACCCTGCCTAGGGCTGTaGCTGGTTGTGTCTAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GWPQGIPQCSAIRSCHAPPCLGL*LVVSRA Trigger: TGCCCTAGACACAACCAGGCACAGCCCTAGGCAGGG...TGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCCAGGACAGCTCCACTCCCAGTGTGGCCTGGCCCTaGCTAGGGCTGTGCCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VGIPREYKGLKGQDSSTPSVAWP*LGLCLV Trigger: AACCAGGCACAGCCCTAGGCAGGGCCAGGCCACACT...GGGAGTGGAGCTGTCCTGGCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTGCTCAGTGCACTGGCTaGTCTTCCAGAGGTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: EVHSVPGATTGLGRASSAAQCTG*SSRGPG Trigger: TCCAGGACCTCTGGAAGAGCAGCCAGTGCACTGAGC...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTCCTGAGGCTATACCATaGGCACACAGGACACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EVHSVPGATTGLGRASSAPEAIP*AHRTRV Trigger: CACACGTGTCCTGTGTGCCCATGGTATAGCCTCAGG...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTCCCAGAACTAGCTCTTCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGGAAGACCAGTGCACTTaGGGAAGAGCAGGAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: STPRTSSSQEQSRLPGVQEDQCT*GRAGGQ Trigger: CTGCCCTCCTGCTCTTCCCCAAGTGCACTGGTCTTC...CTGCACCCCTGGCAGCCTTGACTGCTCCTGGGAAGAGCTAGTTCTGGGAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTCAGTTTTCCATGGTCTaGAACTCCAGCAGACCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RPLRCPSERGGLSRCGWPQFSMV*NSSRPC Trigger: GCAGGGTCTGCTGGAGTTTCAGACCATGGAAAACTG...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCCAGGACAGCTCCACTCCCAGAAAGGGGTTAGCCTaGAGAGGTGCCCTCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VGIPREYKGLKGQDSSTPRKGLA*RGALQF Trigger: GAACTGGAGGGCACCTCTGCAGGCTAACCCCTTTCT...GGGAGTGGAGCTGTCCTGGCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTGCAAGGCTCCATCCAGGTCAAACTCAGGCTTTCCTCATGGCCTCTCGGTAGGAGCAGTCAAGGCTaGCAGGGGTGCAGAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLQGSIQVKLRLSSWPLGRSSQG*QGCRAG Trigger: CCCAGCTCTGCACCCCTGGCAGCCTTGACTGCTCCT...ACCGAGAGGCCATGAGGAAAGCCTGAGTTTGACCTGGATGGAGCCTTGCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | CTATGTCTCTGGGATCCAGTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCCCAGGGGTGCAGAGCTaGGGACAGATAGGCCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LCLWDPVGIPREYKGLKGPGVQS*GQIGLC Trigger: GCAAAGGCCTATCTGTCCCCAGCTCTGCACCCCTGG...GCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCCTCCCAGACAGAAGTGAGCCCAAGTCTTCCCAGACCTGGTTCCTATGGGGCCGGCCAGCATGGTaGAATGTCAGCAGAAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: RFLPDRSEPKSSQTWFLWGRPAW*NVSRRN Trigger: ATTCCTTCTGCTGACATTCCACCATGCTGGCCGGCC...CCATAGGAACCAGGTCTGGGAAGACTTGGGCTCACTTCTGTCTGGGAGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR TCA 90 bp | AAAAAGACATGTGGCTCCCTTCCTCTGAAAACAGTGAGACTGAACCTGCAACCTCAGGCCCACAGCATCTaGGACGAGTGTGGCCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KKTCGSLPLKTVRLNLQPQAHSI*DECGLA Trigger: GGCCAGGCCACACTCGTCTCAGATGCTGTGGGCCTG...AGGTTGCAGGTTCAGTCTCACTGTTTTCAGAGGAAGGGAGCCACATGTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTCCCAGAACTAGCTCTTCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGGATGTCAGTTTTCCATaGTCTGAAACTCCAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: STPRTSSSQEQSRLPGVQDVSFP*SETPAD Trigger: GTCTGCTGGAGTTTCAGACCATGGAAAACTGACATC...CTGCACCCCTGGCAGCCTTGACTGCTCCTGGGAAGAGCTAGTTCTGGGAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GGCCATCAAGAGTGCATGTTCTTGAGTAGGGCTTCTGTCCCTGGAGGTACATTCGATGGCTCAGTGCACTaGCTGCTCTTCCAGAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GHQECMFLSRASVPGGTFDGSVH*LLFQRS Trigger: GGACCTCTGGAAGAGCAGCCAGTGCACTGAGCCATC...GAATGTACCTCCAGGGACAGAAGCCCTACTCAAGAACATGCACTCTTGATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGGCAAATCTCTGTGAGTTTGAAGCCAGCCTGGTCTGCAGAACAAGTTCTAGCAGGGTTTGTCAGCTaGCAGCCTGGAGCAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GRQISVSLKPAWSAEQVLAGFVS*QPGAEE Trigger: TTCCTCTGCTCCAGGCTGGCAGCTGACAAACCCTGC...TAGAACTTGTTCTGCAGACCAGGCTGGCTTCAAACTCACAGAGATTTGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | CTATGTCTCTGGGATCCAGTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCAGGGCTTTTCCTATGTaGAGCATGGAACCGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LCLWDPVGIPREYKGLKGRAFPM*SMEPVP Trigger: AGGAACCGGTTCCATGCTGCACATAGGAAAAGCCCT...GCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GGCCATCAAGAGTGCATGTTCTTGAGTAGGGCTTCTGTCCCTGGAGGTACATTCGTCTCTGGGATCCAGTaGGGATTCCCAGGGAGTACA | + |
|
Preference number: 2 (lower is better) Translates to: GHQECMFLSRASVPGGTFVSGIQ*GFPGST Trigger: TGTACTCCCTGGGAATCCCCACTGGATCCCAGAGAC...GAATGTACCTCCAGGGACAGAAGCCCTACTCAAGAACATGCACTCTTGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTAGTGATAGGAAAGACTaGGAACACTCAAGACATTTA | + |
|
Preference number: 2 (lower is better) Translates to: EVHSVPGATTGLGRASSASDRKD*EHSRHL Trigger: TAAATGTCTTGAGTGTTCCCAGTCTTTCCTATCACT...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGGCAAATCTCTGTGAGTTTGAAGCCAGCCTGGTCTGCAGAACAAGTTCTAAGCCCTGCCCACCTCTaGATTTCCCCAAACAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRQISVSLKPAWSAEQVLSPAHL*ISPNSP Trigger: AGGACTGTTTGGGGAAATCCAGAGGTGGGCAGGGCT...TAGAACTTGTTCTGCAGACCAGGCTGGCTTCAAACTCACAGAGATTTGCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGGCAAATCTCTGTGAGTTTGAAGCCAGCCTGGTCTGCAGAACAAGTTCTAAGTGCTGACTCACGATaGCTGCAGCCCAACAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRQISVSLKPAWSAEQVLSADSR*LQPNRK Trigger: CTTTCTGTTGGGCTGCAGGCATCGTGAGTCAGCACT...TAGAACTTGTTCTGCAGACCAGGCTGGCTTCAAACTCACAGAGATTTGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTCCTCCCAGACAGAAGTGAGCCCAAGTCTTCCCAGACCTGGTTCCTATGGTGTCAGCAGAAGGAATaGAAGATAAAGTCACCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RFLPDRSEPKSSQTWFLWCQQKE*KIKSPR Trigger: CCTTGGTGACTTTATCTTGCATTCCTTCTGCTGACA...CCATAGGAACCAGGTCTGGGAAGACTTGGGCTCACTTCTGTCTGGGAGGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGACATGTGGCTCCCTTCCTCTGAAAACAGTGAGACTGAACCTGCAACCTGGCTCAGGGAAGGCTTaGATGTCAGTTTTCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: KKTCGSLPLKTVRLNLQPGSGKA*MSVFHG Trigger: ACCATGGAAAACTGACATCCAAGCCTTCCCTGAGCC...AGGTTGCAGGTTCAGTCTCACTGTTTTCAGAGGAAGGGAGCCACATGTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCTGCCCTGAGATTTACTCTTCCCTCGGGTCCAGGCTGCTCTGGTTTGCAAATGAAAAAGACATGTaGCTCCCTTCCTCTGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RICPEIYSSLGSRLLWFANEKDM*LPSSEN Trigger: GTTTTCAGAGGAAGGGAGCCACATGTCTTTTTCATT...TGCAAACCAGAGCAGCCTGGACCCGAGGGAAGAGTAAATCTCAGGGCAGATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GATAGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTTGTCAGCTGCCAGCCTaGAGCAGAGGAAGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DRKDWEHSRHLFSKTVLCCQLPA*SRGRGR Trigger: CCTGCCTCTTCCTCTGCTCCAGGCTGGCAGCTGACA...ACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTGCAAGGCTCCATCCAGGTCAAACTCAGGCTTTCCTCATGGCCTCTCGGTACTCAAAGGCTCAAATaGAAATGTAGAGTTTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GLQGSIQVKLRLSSWPLGTQRLK*KCRVCV Trigger: TACACAAACTCTACATTTCCATTTGAGCCTTTGAGT...ACCGAGAGGCCATGAGGAAAGCCTGAGTTTGACCTGGATGGAGCCTTGCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTCCTGGCTGTAGAAAGGGCTaGAGCACAGCTCTACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RKDWEHSRHLFSKTVLCPGCRKG*STALPT Trigger: TGTGGGTAGAGCTGTGCTCCAGCCCTTTCTACAGCC...AGGACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGACATGTGGCTCCCTTCCTCTGAAAACAGTGAGACTGAACCTGCAACCTGGAAAACAAAGGAACTaGTTGGTATGGGACAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KKTCGSLPLKTVRLNLQPGKQRN*LVWDSQ Trigger: TTGGCTGTCCCATACCAACCAGTTCCTTTGTTTTCC...AGGTTGCAGGTTCAGTCTCACTGTTTTCAGAGGAAGGGAGCCACATGTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | AGGCCCACAGCATCTGAGACGAGTGTGGCCTGGCCCTaGCTAGGGCTGTGCCTGGTTGTGTCTAGGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: RPTASETSVAWP*LGLCLVVSRAP Trigger: GGGTGCCCTAGACACAACCAGGCACAGCCCTAGGCAGGGCCAGGCCACACTCGTCTCAGATGCTGTGGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | AGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTaGCTCACGATGCCTGCAGCCCAACAGAAAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRHNWAGPGLKC*LTMPAAQQKER Trigger: CCTCTCTTTCTGTTGGGCTGCAGGCATCGTGAGTCAGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | TGGGAAGAGGAAGGTGCGCAGTGCAAGGCCAGGGGCTaGGACAGCAGCTTCCGTGGGAACCGGGTGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: WEEEGAQCKARG*DSSFRGNRVEH Trigger: GTGTTCCACCCGGTTCCCACGGAAGCTGCTGTCTCAGCCCCTGGCCTTGCACTGCGCACCTTCCTCTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | ACTGGGCTGGGCCGGGCCTCAAGTGCTGACTCACGATaGCTGCAGCCCAACAGAAAGAGAGGGCTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGLGRASSADSR*LQPNRKRGLSC Trigger: GCAGCTGAGCCCTCTCTTTCTGTTGGGCTGCAGGCATCGTGAGTCAGCACTTGAGGCCCGGCCCAGCCCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTGGAAGACCAGTGCACTaGGGGAAGAGCAGGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EVHSVPGATTGLGRASSAGRPVH*GKSRRA Trigger: TGCCCTCCTGCTCTTCCCCAAGTGCACTGGTCTTCC...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | TCTGAGACGAGTGTGGCCTGGCCCTGCCTAGGGCTGTaGCTGGTTGTGTCTAGGGCACCCAGATGTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SETSVAWPCLGL*LVVSRAPRCPP Trigger: AGGAGGACATCTGGGTGCCCTAGACACAACCAGGCACAGCCCTAGGCAGGGCCAGGCCACACTCGTCTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | GCAGTGCAAGGCCAGGGGCTGAGACAGCAGCTTCCGTaGGAACCGGGTGGAACACATGAGGTGACTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AVQGQGLRQQLP*EPGGTHEVTVL Trigger: GAGGACAGTCACCTCATGTGTTCCACCCGGTTCCCACGGAAGCTGCTGTCTCAGCCCCTGGCCTTGCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | GAGACAGCAGCTTCCGTGGGAACCGGGTGGAACACATaGGGTGACTGTCCTCAAGCCCTGCCCACCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETAASVGTGWNT*GDCPQALPTSG Trigger: TCCAGAGGTGGGCAGGGCTTGAGGACAGTCACCTCATGTGTTCCACCCGGTTCCCACGGAAGCTGCTGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | CCGCTGTGGCTGGCCTCAGGGAATCCCACAGTGCAGTaGAATTCGGAGTTGCCACGCCCCAGGCTTTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLWLASGNPTVQ*NSELPRPRLYQ Trigger: CTGATAAAGCCTGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCCACAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CCTGGAGCAGAGGAAGAGGCAGGCTGTAGAAAGGGCTaGAGCACAGCTCTACCCACACCAGGCTCAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGAEEEAGCRKG*STALPTPGSGK Trigger: CTTCCCTGAGCCTGGTGTGGGTAGAGCTGTGCTCCAGCCCTTTCTACAGCCTGCCTCTTCCTCTGCTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | GCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTaGCTGGCCTCAGGGAATCCCACAGTGCAGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: AMSFGERWLEPL*LASGNPTVQCN Trigger: ATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | TCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGAGCTaGGGACAGATAGGCCTTTGCGATGTCCTTCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQEQSRLPGVQS*GQIGLCDVLRR Trigger: TCTCCGAAGGACATCGCAAAGGCCTATCTGTCCCCAGCTCTGCACCCCTGGCAGCCTTGACTGCTCCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTAAACAAAGGAACTGGTaGGTATGGGACAGCCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: EVHSVPGATTGLGRASSAKQRNW*VWDSQS Trigger: GGATTGGCTGTCCCATACCAACCAGTTCCTTTGTTT...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | CCGAAGGCAAACACTGAACTTGCAGGTCCCAAGCTCTaGCTTCAGTCACCTGCCATCGGAACCGCCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PKANTELAGPKL*LQSPAIGTASS Trigger: ACTGCTGGCGGTTCCGATGGCAGGTGACTGAAGGCAGAGCTTGGGACCTGCAAGTTCAGTGTTTGCCTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | CCTCAGGGAATCCCACAGTGCAGTGCAATTCGGAGTTaGCACGCCCCAGGCTTTATCAGCTCAGAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PQGIPQCSAIRS*HAPGFISSEHR Trigger: CCTGTGCTCTGAGCTGATAAAGCCTGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | GCAGTGGGGGAAGTACAGGTTCCTCCCAGACAGAAGTaGGCCCAAGTCTTCCCAGACCTGGTTCCTATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVGEVQVPPRQK*AQVFPDLVPME Trigger: CTCCATAGGAACCAGGTCTGGGAAGACTTGGGCTCACTTCTGTCTGGGAGGAACCTGTACTTCCCCCACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | CAGTCAGGGACAAGGACGGGTAGTGAGAATCTGCCCTaGGATTTACTCTTCCCTCGGGTCCAGGCTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QSGTRTGSENLP*DLLFPRVQAAL Trigger: CAGAGCAGCCTGGACCCGAGGGAAGAGTAAATCTCAGGGCAGATTCTCACTACCCGTCCTTGTCCCTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | AGGGCCAAAGCTCCAAACATCGCTGCTGCCACAGCTTaGAGTGGGGGAAGTACAGGTTCCTCCCAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RAKAPNIAAATA*SGGSTGSSQTE Trigger: TTCTGTCTGGGAGGAACCTGTACTTCCCCCACTGCAAGCTGTGGCAGCAGCGATGTTTGGAGCTTTGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR GCA 72 bp | CTTCCCAGTCAGGGACAAGGACGGGTAGTGAGAATCTaGCCTGAGATTTACTCTTCCCTCGGGTCCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSQGQGRVVRI*PEIYSSLGSRL Trigger: CAGCCTGGACCCGAGGGAAGAGTAAATCTCAGGGCAGATTCTCACTACCCGTCCTTGTCCCTGACTGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CCCCATCTCAAAAGTAAGGGACAGGAGCTGGAGAGATaGCTCAGTGCACTGGCTGCTCTTCCAGAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHLKSKGQELER*LSALAALPEVL Trigger: CAGGACCTCTGGAAGAGCAGCCAGTGCACTGAGCCATCTCTCCAGCTCCTGTCCCTTACTTTTGAGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCAAATCTCTGTGAGTTTGAAGCCAGCCTGGTCTGCAGAACAAGTTCTACACGGGGCCCTGGGCTaGCTCCCAGGCATTAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRQISVSLKPAWSAEQVLHGALG*LPGIKR Trigger: CCTTTTAATGCCTGGGAGCAAGCCCAGGGCCCCGTG...TAGAACTTGTTCTGCAGACCAGGCTGGCTTCAAACTCACAGAGATTTGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CAAAGCTCCAAACATCGCTGCTGCCACAGCTTGCAGTaGGGGAAGTACAGGTTCCTCCCAGACAGAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSSKHRCCHSLQ*GKYRFLPDRSE Trigger: CTCACTTCTGTCTGGGAGGAACCTGTACTTCCCCCACTGCAAGCTGTGGCAGCAGCGATGTTTGGAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | GATGGCTCAGTGCACTGGCTGCTCTTCCAGAGGTCCTaGATTCAATTCCCAGCAACCTCATGGTGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: DGSVHWLLFQRS*IQFPATSWWLT Trigger: TGTGAGCCACCATGAGGTTGCTGGGAATTGAATCCAGGACCTCTGGAAGAGCAGCCAGTGCACTGAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | ATCGAGACCCCCATCTCAAAAGTAAGGGACAGGAGCTaGAGAGATGGCTCAGTGCACTGGCTGCTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IETPISKVRDRS*RDGSVHWLLFQ Trigger: CTGGAAGAGCAGCCAGTGCACTGAGCCATCTCTCCAGCTCCTGTCCCTTACTTTTGAGATGGGGGTCTCGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CAGTTCCAACATAACTTAGGGGAAAAGGTGGCAGCCTaGCCGGCCAGCATGGTGGAATGTCAGCAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QFQHNLGEKVAA*PASMVECQQKE Trigger: TTCCTTCTGCTGACATTCCACCATGCTGGCCGGCCAGGCTGCCACCTTTTCCCCTAAGTTATGTTGGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | ACGGGGAAGGTTCTGGCCATCAAGAGTGCATGTTCTTaGGTAGGGCTTCTGTCCCTGGAGGTACATTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: TGKVLAIKSACS*VGLLSLEVHSV Trigger: AACGGAATGTACCTCCAGGGACAGAAGCCCTACTCAAGAACATGCACTCTTGATGGCCAGAACCTTCCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | ACCCAGATCACAGGAAAACAAAGGAACTGGTTGGTATaGGACAGCCAATCCAGCCCAGGGACATGTAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQITGKQRNWLV*DSQSSPGTCKG Trigger: GCCCTTACATGTCCCTGGGCTGGATTGGCTGTCCCATACCAACCAGTTCCTTTGTTTTCCTGTGATCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCAAATCTCTGTGAGTTTGAAGCCAGCCTGGTCTGCAGAACAAGTTCTAAGGCTCAGGGAAGGCTaGGATGTCAGTTTTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GRQISVSLKPAWSAEQVLRLREG*DVSFPW Trigger: CCATGGAAAACTGACATCCAAGCCTTCCCTGAGCCT...TAGAACTTGTTCTGCAGACCAGGCTGGCTTCAAACTCACAGAGATTTGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | AAGAAGACAAAGCTAAGCTATGTCTCTGGGATCCAGTaGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KKTKLSYVSGIQ*GFPGSTKGLRA Trigger: GGCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAGCTTAGCTTTGTCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | GCTTTCCACCAAGAAGACAAAGCTAAGCTATGTCTCTaGGATCCAGTGGGGATTCCCAGGGAGTACAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFHQEDKAKLCL*DPVGIPREYKG Trigger: CCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAGCTTAGCTTTGTCTTCTTGGTGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CAGAGGTCCTGGATTCAATTCCCAGCAACCTCATGGTaGCTCACAACCATCTGTAATAGAACCGATGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRSWIQFPATSW*LTTICNRTDAL Trigger: GAGGGCATCGGTTCTATTACAGATGGTTGTGAGCCACCATGAGGTTGCTGGGAATTGAATCCAGGACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | TTCCAGAGGTCCTGGATTCAATTCCCAGCAACCTCATaGTGGCTCACAACCATCTGTAATAGAACCGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: FQRSWIQFPATS*WLTTICNRTDA Trigger: GGCATCGGTTCTATTACAGATGGTTGTGAGCCACCATGAGGTTGCTGGGAATTGAATCCAGGACCTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR-3UTR CAA 90 bp | GATAGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTGGAGGGCAGCAGGGTTaGTCAGCTGCCAGCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DRKDWEHSRHLFSKTVLCGGQQG*SAASLE Trigger: CTCCAGGCTGGCAGCTGACAAACCCTGCTGCCCTCC...ACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CTTAAACCCAGATCACAGGAAAACAAAGGAACTGGTTaGTATGGGACAGCCAATCCAGCCCAGGGACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LKPRSQENKGTG*YGTANPAQGHV Trigger: TACATGTCCCTGGGCTGGATTGGCTGTCCCATACCAACCAGTTCCTTTGTTTTCCTGTGATCTGGGTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR TCA 72 bp | GTTACCTTAAAGCTATCACCCCAGAACTCAGGAGGCTaGCAGAACCAAGGGTTTAAGGCGAGTATTGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VTLKLSPQNSGG*QNQGFKASIGN Trigger: GTTACCAATACTCGCCTTAAACCCTTGGTTCTGTCAGCCTCCTGAGTTCTGGGGTGATAGCTTTAAGGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CCA 72 bp | CCATGGGCACACAGGACACGTGTGGTTACCATACTCTaGCTATTCCATATTATAACCATTCCAAAGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PWAHRTRVVTIL*LFHIITIPKCA Trigger: AGCACACTTTGGAATGGTTATAATATGGAATAGCCAGAGTATGGTAACCACACGTGTCCTGTGTGCCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | GAGGTACATTCCGTTCCAGGCGCCACAACTGGGCTGGGCCGGGCCTCAAGTGCTCAGGCCTTGCTCACCTaGCCCAGTCTTGGCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EVHSVPGATTGLGRASSAQALLT*PSLGPT Trigger: CGTGGGGCCAAGACTGGGCCAGGTGAGCAAGGCCTG...AGCACTTGAGGCCCGGCCCAGCCCAGTTGTGGCGCCTGGAACGGAATGTACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | TCCACTCCCAGAACTAGCTCTTCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGGAGGTGGAGAGGGGCTaGGAGCTTCGTGAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STPRTSSSQEQSRLPGVQEVERG*ELREGR Trigger: CCGGCCCTCACGAAGCTCCCAGCCCCTCTCCACCTC...CTGCACCCCTGGCAGCCTTGACTGCTCCTGGGAAGAGCTAGTTCTGGGAGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTGCACACCCTCCAGACTaGTGGCCACAGTCACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLRCPSERGGLSRCGWPAHPPD*WPQSLV Trigger: AACCAGTGACTGTGGCCATCAGTCTGGAGGGTGTGC...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTGGAGACGAGCCAGAGTaGAAAGGCCTCCAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLRCPSERGGLSRCGWPGDEPE*KGLQSH Trigger: GTGGCTTTGGAGGCCTTTGCACTCTGGCTCGTCTCC...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCCTCAGGGAATCCCACAGTGCAGTGCAATTCGGAGTTGCCACGCCCCAGCATTCAGCAGGCCTTaGTCACCTGGCCCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWPQGIPQCSAIRSCHAPAFSRP*SPGPVL Trigger: CAAGACTGGGCCAGGTGAGCAAGGCCTGCTGAATGC...TGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTCTCCAAAGCCACGTCTaGGAGCTGCAGGACTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRCPSERGGLSRCGWPLQSHV*ELQDFT Trigger: CGTGAAGTCCTGCAGCTCCCAGACGTGGCTTTGGAG...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | CTATGTCTCTGGGATCCAGTGGGGATTCCCAGGGAGTACAAAGGGCTTAAGGGCCCTGCCTTCGCAGCTTaGGGCGCTGGGTGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLWDPVGIPREYKGLKGPAFAA*GAGWEV Trigger: CACCTCCCACCCAGCGCCCCAAGCTGCGAAGGCAGG...GCCCTTAAGCCCTTTGTACTCCCTGGGAATCCCCACTGGATCCCAGAGACATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTAGGCCCAGCAGCACATaGTTCTCCCTGTTGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRCPSERGGLSRCGWPRPSST*FSLLSM Trigger: CATCGACAACAGGGAGAAGCATGTGCTGCTGGGCCT...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTTGCGATGTCCTTCGGAGAGAGGTGGCTTGAGCCGCTGTGGCTGGCCTCTCATGGGCACTGATTaGGGACAAATTCTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLRCPSERGGLSRCGWPLMGTD*GQILHG Trigger: GCCGTGGAGAATTTGTCCTCAATCAGTGCCCATGAG...AGGCCAGCCACAGCGGCTCAAGCCACCTCTCTCCGAAGGACATCGCAAAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | GGTTTGCAAGGCTCCATCCAGGTCAAACTCAGGCTTTCCTCATGGCCTCTCGGTTTGCGCCCACCTCGATaGAAGAAGCCCTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQGSIQVKLRLSSWPLGLRPPR*KKPWAG Trigger: GCCAGCCCAGGGCTTCTTGCATCGAGGTGGGCGCAA...ACCGAGAGGCCATGAGGAAAGCCTGAGTTTGACCTGGATGGAGCCTTGCAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CAA 72 bp | GCCTCAGGGAATCCCACAGTGCAGTGCAATTCGGAGTaGCCACGCCCCAGGCTTTATCAGCTCAGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNPTVQCNSE*PRPRLYQLRAQ Trigger: CTGTGCTCTGAGCTGATAAAGCCTGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | TCCACTCCCAGAACTAGCTCTTCCCAGGAGCAGTCAAGGCTGCCAGGGGTGCAGGCAGCTCATGGGCACTaGTTGAGGACAAATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STPRTSSSQEQSRLPGVQAAHGH*LRTNSP Trigger: TGGAGAATTTGTCCTCAATCAGTGCCCATGAGCTGC...CTGCACCCCTGGCAGCCTTGACTGCTCCTGGGAAGAGCTAGTTCTGGGAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | GAGCCACCATTCAGCACAGAGACATCAGTAAAGGCCAACAAGAAAGGGGTTAGCCATCGGAGGCGTTGGTaGAGCGCAGCAGCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPPFSTETSVKANKKGVSHRRRW*SAAAAP Trigger: CGGAGCTGCTGCTGCGCTTCACCAACGCCTCCGATG...GCTAACCCCTTTCTTGTTGGCCTTTACTGATGTCTCTGTGCTGAATGGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | GGCTGTAGAAAGGGCTGGAGCACAGCTCTACCCACACCAGGCTCAGGGAAGGCTTATAGGGCTGGTGCTTaGGTTTCAATTGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRKGWSTALPTPGSGKAYRAGA*VSIAPP Trigger: TGGAGGTGCAATTGAAACCCAAGCACCAGCCCTATA...AGCCTTCCCTGAGCCTGGTGTGGGTAGAGCTGTGCTCCAGCCCTTTCTACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | CAGACAATGCCTTATAGTGAGGTCAGCCTTTTCTTTCTCTCTGCTGCCAAAACTCACCTGGCCCAGTCTTaGCCCCACGGCCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTMPYSEVSLFFLSAAKTHLAQS*PHGPGR Trigger: CCTTCCGGGGCCGTGGGGCCAAGACTGGGCCAGGTG...AGTTTTGGCAGCAGAGAGAAAGAAAAGGCTGACCTCACTATAAGGCATTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CAA 72 bp | CACGGGGAAGGTTCTGGCCATCAAGAGTGCATGTTCTaGAGTAGGGCTTCTGTCCCTGGAGGTACATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HGEGSGHQECMF*SRASVPGGTFR Trigger: ACGGAATGTACCTCCAGGGACAGAAGCCCTACTCAAGAACATGCACTCTTGATGGCCAGAACCTTCCCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | AGAATCTGCCCTGAGATTTACTCTTCCCTCGGGTCCAGGCTGCTCTGGTTTGCACTGTTGTCGATGACGTaGACACCCTCCAGACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RICPEIYSSLGSRLLWFALLSMT*TPSRLM Trigger: CATCAGTCTGGAGGGTGTGCACGTCATCGACAACAG...TGCAAACCAGAGCAGCCTGGACCCGAGGGAAGAGTAAATCTCAGGGCAGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CCA 90 bp | ACAAGAAAGGGGTTAGCCTGCAGAGGTGCCCTCCAGTTCCAACATAACTTAGGGAGTGGGAGCCCAAGGTaGCCTCACGTTCACTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKGLACRGALQFQHNLGSGSPR*PHVHCC Trigger: ACAACAGTGAACGTGAGGCCACCTTGGGCTCCCACT...CCCTAAGTTATGTTGGAACTGGAGGGCACCTCTGCAGGCTAACCCCTTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | GGCCATCAAGAGTGCATGTTCTTGAGTAGGGCTTCTGTCCCTGGAGGTACATTCTGCTTGGGTTTCAATTaGACCTCCAAGAGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHQECMFLSRASVPGGTFCLGFN*TSKRGE Trigger: CTCCCCTCTCTTGGAGGTGCAATTGAAACCCAAGCA...GAATGTACCTCCAGGGACAGAAGCCCTACTCAAGAACATGCACTCTTGATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR GCA 90 bp | AAAAAGACATGTGGCTCCCTTCCTCTGAAAACAGTGAGACTGAACCTGCAACCTGAGCGGTCAGCACATTaGCCTTGGCTTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKTCGSLPLKTVRLNLQPERSAH*PWLPHR Trigger: TCTATGAGGAAGCCAAGGGCAATGTGCTGACCGCTC...AGGTTGCAGGTTCAGTCTCACTGTTTTCAGAGGAAGGGAGCCACATGTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | GATAGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTGCAGCTCGTGGCACTTaGGGAGGTATGCGCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRKDWEHSRHLFSKTVLCAARGT*GGMRGS Trigger: ACTACCGCGCATACCTCCTCAAGTGCCACGAGCTGC...ACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTCCTTCTCCCTGTTGTCGATaGCGTGCACACCCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDWEHSRHLFSKTVLCPSPCCR*RAHPPD Trigger: GTCTGGAGGGTGTGCACGTCATCGACAACAGGGAGA...AGGACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| 3UTR CAA 72 bp | CCCACCTCTGGATTTCCCCAAACAGTCCTCCTGGCTTaGAACATTGGGACTGAGTTGACATTTTACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTSGFPQTVLLA*NIGTELTFYRK Trigger: TTTTCTGTAAAATGTCAACTCAGTCCCAATGTTCAAAGCCAGGAGGACTGTTTGGGGAAATCCAGAGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCCTCAGGGAATCCCACAGTGCAGTGCAATTCGGAGTTGCCACGCCCCAGGCATTCAGCAGGCCTaGCTCACCTGGCCCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWPQGIPQCSAIRSCHAPGIQQA*LTWPSL Trigger: AAGACTGGGCCAGGTGAGCAAGGCCTGCTGAATGCC...TGGGGCGTGGCAACTCCGAATTGCACTGCACTGTGGGATTCCCTGAGGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | CCAAAACTTCTGGAGCTCACTGGCAGGCAAACTGGTTTCATTTTCAGAGATGATCCCTGCCTTCGCAGCTaGGGGCGCTGGGTGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKLLELTGRQTGFIFRDDPCLRS*GRWVGG Trigger: ACCTCCCACCCAGCGCCCCAAGCTGCGAAGGCAGGG...ATCATCTCTGAAAATGAAACCAGTTTGCCTGCCAGTGAGCTCCAGAAGTTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | AAAAAGACATGTGGCTCCCTTCCTCTGAAAACAGTGAGACTGAACCTGCAACCTGCCACAGTCACTGGTTaGCGCCCACCTCGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKTCGSLPLKTVRLNLQPATVTG*RPPRCK Trigger: CTTGCATCGAGGTGGGCGCAAACCAGTGACTGTGGC...AGGTTGCAGGTTCAGTCTCACTGTTTTCAGAGGAAGGGAGCCACATGTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | CAGACAATGCCTTATAGTGAGGTCAGCCTTTTCTTTCTCTCTGCTGCCAAAACTTCATCATCGGAGGCGTaGGTGAAGCGCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTMPYSEVSLFFLSAAKTSSSEA*VKRSSS Trigger: GCTGCTGCTGCGCTTCACCAACGCCTCCGATGATGA...AGTTTTGGCAGCAGAGAGAAAGAAAAGGCTGACCTCACTATAAGGCATTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | AACCCAGATCACAGGAAAACAAAGGAACTGGTTGGTATGGGACAGCCAATCCAGACATGCTTCTCCCTGTaGTCGATGACGTGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: NPDHRKTKELVGMGQPIQTCFSL*SMTCTP Trigger: GGGTGTGCACGTCATCGACAACAGGGAGAAGCATGT...CTGGATTGGCTGTCCCATACCAACCAGTTCCTTTGTTTTCCTGTGATCTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | CTTTATCAGCTCAGAGCACAGGAGACAAGGCAAAATCTAACCCTTAAACCCAGATCACGTTCACTGTTGTaGCCTGTCACTTCCTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LYQLRAQETRQNLTLKPRSRSLL*PVTSFT Trigger: GGTAAAGGAAGTGACAGGCAACAACAGTGAACGTGA...TCTGGGTTTAAGGGTTAGATTTTGCCTTGTCTCCTGTGCTCTGAGCTGATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTCCTTTTGGTTTCACCCGCTaGATCCCCTTGCCGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKDWEHSRHLFSKTVLCPFGFTR*IPLPSS Trigger: GGAAGACGGCAAGGGGATCAAGCGGGTGAAACCAAA...AGGACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS-3UTR CAA 90 bp | GATAGGAAAGACTGGGAACACTCAAGACATTTATTTAGTAAAACAGTGCTCTGTGTGCTTGGGTTTCAATaGCACCTCCAAGAGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DRKDWEHSRHLFSKTVLCVLGFQ*HLQERG Trigger: TCCCCTCTCTTGGAGGTGCAATTGAAACCCAAGCAC...ACAGAGCACTGTTTTACTAAATAAATGTCTTGAGTGTTCCCAGTCTTTCCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||
| CDS GCA 72 bp | AGTGGGAGCCCAAGGTGGCCTCACGTTCACTGTTGTTaGCTGTCACTTCCTTTACCTGGCGGTAGGCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGSPRWPHVHCC*LSLPLPGGRHS Trigger: TGAATGCCTACCGCCAGGTAAAGGAAGTGACAGGCAACAACAGTGAACGTGAGGCCACCTTGGGCTCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025728.13 |
||