Pregenerated sensors for FRMD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036131Ensembl transcript IDs: ENSMUST00000060650.7, ENSMUST00000164311.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGGGATGGGTGGAGCGATGTGGCCTCTGCCTCCGGTTTAGAATaGTCCAGCTCGGCTGCAAAGGTCACTTCAACTGCAGAGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LWDGWSDVASASGLE*SSSAAKVTSTAEFL Trigger: GAGGAACTCTGCAGTTGAAGTGACCTTTGCAGCCGAGCTGGAGCATTCTAAACCGGAGGCAGAGGCCACATCGCTCCACCCATCCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 90 bp | CCAGGTGAATCTGCATCCCTTCACCATCACTGGCGGGCTGCGGTCTaGTGCCATACATATCCAGCTTCCTTGCTATGTCCAGTAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: PGESASLHHHWRAAV*CHTYPASLLCPVAE Trigger: TTCTGCTACTGGACATAGCAAGGAAGCTGGATATGTATGGCATCAGACCGCAGCCCGCCAGTGATGGTGAAGGGATGCAGATTCACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CCA 90 bp | GCTGCCTTGCTGGACTCGCTTTGCTTGTGTGACTATCCGCAAACTTaGAGGTTGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: AALLDSLCLCDYPQT*RLFGRSLEDSAPQR Trigger: TCTTTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGAGTCCAGCAAGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 90 bp | GAAGAAAGCATGGTACTCTACGCAAGTCTTCCAGAAAGCCTTGCATaGATCTCGGCTGGCCATGGTGAACTCCAAAGTGTCTTTGCACAA | + |
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Preference number: 1 (lower is better) Translates to: EESMVLYASLPESLA*ISAGHGELQSVFAQ Trigger: TTGTGCAAAGACACTTTGGAGTTCACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGACTTGCGTAGAGTACCATGCTTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 90 bp | TATAGGGTACATCGGTGTATGTTAGCTGCCTTGCTGGACTCGCTTTaGTTGTGTGACTATCCGCAAACTTGGAGGTTGTTTGGAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: YRVHRCMLAALLDSL*LCDYPQTWRLFGRS Trigger: GCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGAGTCCAGCAAGGCAGCTAACATACACCGATGTACCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 90 bp | TATTGCACTATGATCTACATAGCTGTCTGGTCTCATATTTTCCTCTaGCATGATCAGAGACCGTCTGGGTACCTGGGGTGGCTTGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: YCTMIYIAVWSHIFL*HDQRPSGYLGWLVH Trigger: GTGGACAAGCCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAATATGAGACCAGACAGCTATGTAGATCATAGTGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 90 bp | CACTATGATCTACATAGCTGTCTGGTCTCATATTTTCCTCTGCCATaGTCAGAGACCGTCTGGGTACCTGGGGTGGCTTGTCCACATAAA | + |
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Preference number: 1 (lower is better) Translates to: HYDLHSCLVSYFPLP*SETVWVPGVACPHK Trigger: TTTATGTGGACAAGCCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAATATGAGACCAGACAGCTATGTAGATCATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 90 bp | AGTCTCCTAATTCTGACTGTAAGATGTGCGACACCATTAAAGCTGTaGAGTTGTCACTGCATGGAAGCCTTCCCAGAGCCAAATCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SLLILTVRCATPLKL*SCHCMEAFPEPNPS Trigger: AGAAGGATTTGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTCAGAATTAGGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 90 bp | AAAGTTGCCTTTGAGTTCTTCCACTGTAGCGGAAACTGGAACCTTTaGTACAGAGTAGTGTTTTGGGCTTTGATTTGGGCTCTTCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: KVAFEFFHCSGNWNL*YRVVFWALIWALRR Trigger: TCTCCGAAGAGCCCAAATCAAAGCCCAAAACACTACTCTGTAGCAAAGGTTCCAGTTTCCGCTACAGTGGAAGAACTCAAAGGCAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGAGCGATGTGGCCTCTGCCTCCGGTTTAGAATGCTCCAGCTCGGCTGCCCATCACTGGCGGGCTaGGGTCTGATGCCATACATA | + |
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Preference number: 2 (lower is better) Translates to: WVERCGLCLRFRMLQLGCPSLAG*GLMPYI Trigger: TATGTATGGCATCAGACCGCAGCCCGCCAGTGATGG...GCAGCCGAGCTGGAGCATTCTAAACCGGAGGCAGAGGCCACATCGCTCCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR TCA 90 bp | CCAATACTCCCATGTGAGCAACAGCCAGGTGAATCTGCATCCCTTCACCATCACTGGCGGGCTGCGGTCTaGTGCCATACATATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PILPCEQQPGESASLHHHWRAAV*CHTYPA Trigger: AGCTGGATATGTATGGCATCAGACCGCAGCCCGCCA...GTGATGGTGAAGGGATGCAGATTCACCTGGCTGTTGCTCACATGGGAGTATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR GCA 90 bp | GCATGGTACTCTACGCAAGTCTTCCAGAAAGCCTTGCATGCATCTCGGCTGGCCCTGTGCAGTTGTCACTaGATGGAAGCCTTCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AWYSTQVFQKALHASRLALCSCH*MEAFPE Trigger: CTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAG...GGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGACTTGCGTAGAGTACCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGCTCTGCAAACGTACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGGGAACTGCTTTGGGATaGGTGGAGCGATGTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLLCKRTCKQIGFTSQSRGTALG*VERCGL Trigger: GAGGCCACATCGCTCCACCCATCCCAAAGCAGTTCC...CCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTACGTTTGCAGAGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGCTCTGCAAACGTACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGCCAGAAAGCCTTGCATaGATCTCGGCTGGCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLCKRTCKQIGFTSQSRPESLA*ISAGHG Trigger: ACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGG...CCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTACGTTTGCAGAGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTGCTCTGCAAACGTACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGCTCGGCTGGCCATGGTaGACTCCAAAGTGTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: TPALQTYMQTDRFYESEQLGWPW*TPKCLC Trigger: GCAAAGACACTTTGGAGTTCACCATGGCCAGCCGAG...CTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTACGTTTGCAGAGCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 90 bp | AGCCTGAAGAAAGCATGGTACTCTACGCAAGTCTTCCAGAAAGCCTaGCATGCATCTCGGCTGGCCATGGTGAACTCCAAAGTGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLKKAWYSTQVFQKA*HASRLAMVNSKVSL Trigger: CAAAGACACTTTGGAGTTCACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGACTTGCGTAGAGTACCATGCTTTCTTCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAAAGAACTCTATGGGCTGCTCTTCGGAGAGCCTaGAGAAAGCATGGTACTCTA | + |
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Preference number: 2 (lower is better) Translates to: RLFGRSLEDSAPQRTLWAALRRA*RKHGTL Trigger: TAGAGTACCATGCTTTCTTCAGGCTCTCCGAAGAGC...AGCCCATAGAGTTCTTTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 90 bp | TTGCTGGACTCGCTTTGCTTGTGTGACTATCCGCAAACTTGGAGGTaGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAAAGAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLDSLCLCDYPQTWR*FGRSLEDSAPQRTL Trigger: TAGAGTTCTTTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGAGTCCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 90 bp | AGGGTACATCGGTGTATGTTAGCTGCCTTGCTGGACTCGCTTTGCTaGTGTGACTATCCGCAAACTTGGAGGTTGTTTGGAAGGAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: RVHRCMLAALLDSLC*CDYPQTWRLFGRSL Trigger: TAAGCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGAGTCCAGCAAGGCAGCTAACATACACCGATGTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 90 bp | GGTAGTAGCTGCTGCCATATGTCAGTCTCAGATCTTCCACTTGTTTaGACACATCAGAGAGAATGTCTGGTGATGATCTGCACTGCCGTT | + |
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Preference number: 2 (lower is better) Translates to: GSSCCHMSVSDLPLV*THQRECLVMICTAV Trigger: AACGGCAGTGCAGATCATCACCAGACATTCTCTCTGATGTGTCAAAACAAGTGGAAGATCTGAGACTGACATATGGCAGCAGCTACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR GCA 90 bp | CGAGTCAGAGCAGGACATGGTCCTAAAGGTCTAAATTCTGACCCAAAAGGAAAAACACCATTAAAGCTGTaGAGTTGTCACTGCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: RVRAGHGPKGLNSDPKGKTPLKL*SCHCME Trigger: TTCCATGCAGTGACAACTGCACAGCTTTAATGGTGT...TTTTCCTTTTGGGTCAGAATTTAGACCTTTAGGACCATGTCCTGCTCTGACTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CCA 90 bp | CGAGTCAGAGCAGGACATGGTCCTAAAGGTCTAAATTCTGACCCAAAAGGAAAACTCTCTAAACTGGCTTaGCTTGGTAAGTACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: RVRAGHGPKGLNSDPKGKLSKLA*LGKYCV Trigger: AACACAGTACTTACCAAGCCAAGCCAGTTTAGAGAG...TTTTCCTTTTGGGTCAGAATTTAGACCTTTAGGACCATGTCCTGCTCTGACTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 90 bp | GCAAATGCATCATCTAAATGTGGATCTTCCTCCTCTGGCTCTACATaGATATTGCTTCTACCACTAGTTCTAGCCATAGCTTCTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: ANASSKCGSSSSGST*ILLLPLVLAIASWS Trigger: ACTCCAAGAAGCTATGGCTAGAACTAGTGGTAGAAGCAATATCAATGTAGAGCCAGAGGAGGAAGATCCACATTTAGATGATGCATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCATAATATCAACCTTCTGACTAGTACAAGGAATATAGGGTACATCGGTGTACACTGTAGCGGAAACTaGAACCTTTGCTACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: RHNINLLTSTRNIGYIGVHCSGN*NLCYRV Trigger: TACTCTGTAGCAAAGGTTCCAGTTTCCGCTACAGTG...TACACCGATGTACCCTATATTCCTTGTACTAGTCAGAAGGTTGATATTATGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | GGGTGGAGCGATGTGGCCTCTGCCTCCGGTTTAGAATaGTCCAGCTCGGCTGCAAAGGTCACTTCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: GWSDVASASGLE*SSSAAKVTSTA Trigger: TGCAGTTGAAGTGACCTTTGCAGCCGAGCTGGAGCATTCTAAACCGGAGGCAGAGGCCACATCGCTCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | GGAACTGCTTTGGGATGGGTGGAGCGATGTGGCCTCTaGCTCCGGTTTAGAATGCTCCAGCTCGGCTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GTALGWVERCGL*LRFRMLQLGCK Trigger: TTTGCAGCCGAGCTGGAGCATTCTAAACCGGAGGCAGAGGCCACATCGCTCCACCCATCCCAAAGCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCCTCTGCCATGATCAGAGACCGTCTGGGTACCTGGGGTGGCTTGTCCACGTCTTCCAGAAAGCCTaGCATGCATCTCGGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: IFLCHDQRPSGYLGWLVHVFQKA*HASRLA Trigger: GGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGAC...GTGGACAAGCCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | GGCCTCTGCCTCCGGTTTAGAATGCTCCAGCTCGGCTaGAAAGGTCACTTCAACTGCAGAGTTCCTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GLCLRFRMLQLG*KGHFNCRVPPP Trigger: AGGAGGAGGAACTCTGCAGTTGAAGTGACCTTTGCAGCCGAGCTGGAGCATTCTAAACCGGAGGCAGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 72 bp | TCTGCATCCCTTCACCATCACTGGCGGGCTGCGGTCTaGTGCCATACATATCCAGCTTCCTTGCTATGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SASLHHHWRAAV*CHTYPASLLCP Trigger: TGGACATAGCAAGGAAGCTGGATATGTATGGCATCAGACCGCAGCCCGCCAGTGATGGTGAAGGGATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 72 bp | CTACATAGCTGTCTGGTCTCATATTTTCCTCTGCCATaGTCAGAGACCGTCTGGGTACCTGGGGTGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LHSCLVSYFPLP*SETVWVPGVAC Trigger: ACAAGCCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAATATGAGACCAGACAGCTATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | ATGGTACTCTACGCAAGTCTTCCAGAAAGCCTTGCATaGATCTCGGCTGGCCATGGTGAACTCCAAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: MVLYASLPESLA*ISAGHGELQSV Trigger: GACACTTTGGAGTTCACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGACTTGCGTAGAGTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CCA 72 bp | CTGGACTCGCTTTGCTTGTGTGACTATCCGCAAACTTaGAGGTTGTTTGGAAGGAGCTTAGAGGACTCCGCT | + |
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Preference number: 3 (lower is better) Translates to: LDSLCLCDYPQT*RLFGRSLEDSA Trigger: AGCGGAGTCCTCTAAGCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGAGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 72 bp | CTGGGCTCCGGCCTATGTGCTGCTGATGAAATTGCATaGTCTTGCTCTCTAAACTGGCTTGGCTTGGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LGSGLCAADEIA*SCSLNWLGLVS Trigger: ACTTACCAAGCCAAGCCAGTTTAGAGAGCAAGATCATGCAATTTCATCAGCAGCACATAGGCCGGAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | ATGATCTACATAGCTGTCTGGTCTCATATTTTCCTCTaGCATGATCAGAGACCGTCTGGGTACCTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MIYIAVWSHIFL*HDQRPSGYLGW Trigger: CCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAATATGAGACCAGACAGCTATGTAGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | ATTCTGACTGTAAGATGTGCGACACCATTAAAGCTGTaGAGTTGTCACTGCATGGAAGCCTTCCCAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ILTVRCATPLKL*SCHCMEAFPEP Trigger: TGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAAAGAACTCTATGGGCTCTAAACTGGCTTGGCTaGGTAAGTACTGTGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: RLFGRSLEDSAPQRTLWALNWLG*VSTVFA Trigger: TGCAAACACAGTACTTACCAAGCCAAGCCAGTTTAG...AGCCCATAGAGTTCTTTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGCTCTGCAAACGTACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGACATATCCAGCTTCCTaGCTATGTCCAGTAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLLCKRTCKQIGFTSQSRTYPAS*LCPVAE Trigger: TTCTGCTACTGGACATAGCAAGGAAGCTGGATATGT...CCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTACGTTTGCAGAGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR TCA 72 bp | TCCAGAAAGCCTTGCATGCATCTCGGCTGGCCATGGTaGACTCCAAAGTGTCTTTGCACAACACCAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: SRKPCMHLGWPW*TPKCLCTTPKY Trigger: ATATTTTGGTGTTGTGCAAAGACACTTTGGAGTTCACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | TACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGACATGGTCCTAAAGGTCATTAAAGCTGTGCAGTaGTCACTGCATGGAAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: YMQTDRFYESEQDMVLKVIKAVQ*SLHGSL Trigger: AAGGCTTCCATGCAGTGACAACTGCACAGCTTTAAT...GACCTTTAGGACCATGTCCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | GTTGCCTTTGAGTTCTTCCACTGTAGCGGAAACTGGAACCTTTGCTACAGAGTACTCTTAAAACTCAGCTaGCGAATCTTAGCCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: VAFEFFHCSGNWNLCYRVLLKLS*RILAQL Trigger: CAACTGGGCTAAGATTCGCAAGCTGAGTTTTAAGAG...TACTCTGTAGCAAAGGTTCCAGTTTCCGCTACAGTGGAAGAACTCAAAGGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | CGAGTCAGAGCAGGACATGGTCCTAAAGGTCTAAATTCTGACCCAAAAGGAAAATCTAGCCATAGCTTCTaGGAGTTCTTGAAGGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RVRAGHGPKGLNSDPKGKSSHSF*EFLKVL Trigger: CAAGACCTTCAAGAACTCCAAGAAGCTATGGCTAGA...TTTTCCTTTTGGGTCAGAATTTAGACCTTTAGGACCATGTCCTGCTCTGACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR GCA 72 bp | TTTGAGTTCTTCCACTGTAGCGGAAACTGGAACCTTTaGTACAGAGTAGTGTTTTGGGCTTTGATTTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: FEFFHCSGNWNL*YRVVFWALIWA Trigger: AGCCCAAATCAAAGCCCAAAACACTACTCTGTAGCAAAGGTTCCAGTTTCCGCTACAGTGGAAGAACTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CCA 72 bp | AAAGTTGCCTTTGAGTTCTTCCACTGTAGCGGAAACTaGAACCTTTGCTACAGAGTAGTGTTTTGGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: KVAFEFFHCSGN*NLCYRVVFWAL Trigger: CAAAGCCCAAAACACTACTCTGTAGCAAAGGTTCCAGTTTCCGCTACAGTGGAAGAACTCAAAGGCAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR-3UTR CAA 90 bp | ACTATGATCTACATAGCTGTCTGGTCTCATATTTTCCTCTGCCATGATCAGAGAGTAGTGTTTTGGGCTTaGATTTGGGCTCTTCGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TMIYIAVWSHIFLCHDQRVVFWA*IWALRR Trigger: TCTCCGAAGAGCCCAAATCAAAGCCCAAAACACTAC...TCTCTGATCATGGCAGAGGAAAATATGAGACCAGACAGCTATGTAGATCATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR TCA 90 bp | TGCATCCCTTCACCATCACTGGCGGGCTGCGGTCTGATGCCATACATATCCAGCAGATACCCCATCCCTTaGGTGATCTTCCATACTTAC | + |
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Preference number: 4 (lower is better) Translates to: CIPSPSLAGCGLMPYISSRYPIP*VIFHTY Trigger: GTAAGTATGGAAGATCACTCAAGGGATGGGGTATCT...GCTGGATATGTATGGCATCAGACCGCAGCCCGCCAGTGATGGTGAAGGGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR TCA 90 bp | TCCCATGTGAGCAACAGCCAGGTGAATCTGCATCCCTTCACCATCACTGGCGGGACCCCATCCCTTGAGTaGTCTTCCATACTTACTTTT | + |
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Preference number: 4 (lower is better) Translates to: SHVSNSQVNLHPFTITGGTPSLE*SSILTF Trigger: AAAAGTAAGTATGGAAGATCACTCAAGGGATGGGGT...CCCGCCAGTGATGGTGAAGGGATGCAGATTCACCTGGCTGTTGCTCACATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGCTCTGCAAACGTACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGTCAGCAAGATTGAGATaGCCGCAGCTCAGGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLCKRTCKQIGFTSQSRSARLR*PQLRLK Trigger: CTTCAACCTGAGCTGCGGCCATCTCAATCTTGCTGA...CCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTACGTTTGCAGAGCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 72 bp | GACTGTAAGATGTGCGACACCATTAAAGCTGTGCAGTaGTCACTGCATGGAAGCCTTCCCAGAGCCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: DCKMCDTIKAVQ*SLHGSLPRAKS Trigger: GGATTTGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 72 bp | AAAGCATGGTACTCTACGCAAGTCTTCCAGAAAGCCTaGCATGCATCTCGGCTGGCCATGGTGAACTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KAWYSTQVFQKA*HASRLAMVNSK Trigger: TTTGGAGTTCACCATGGCCAGCCGAGATGCATGCAAGGCTTTCTGGAAGACTTGCGTAGAGTACCATGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 72 bp | TCGCTTTGCTTGTGTGACTATCCGCAAACTTGGAGGTaGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLCLCDYPQTWR*FGRSLEDSAPQ Trigger: TTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCTCCAAGTTTGCGGATAGTCACACAAGCAAAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR TCA 90 bp | TCTCCTAATTCTGACTGTAAGATGTGCGACACCATTAAAGCTGTGCAGTTGTCACCTTTTCAGCAAGATTaGGATGGCCGCAGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SPNSDCKMCDTIKAVQLSPFQQD*DGRSSG Trigger: ACCTGAGCTGCGGCCATCTCAATCTTGCTGAAAAGG...TGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTCAGAATTAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 72 bp | AAGGAATATAGGGTACATCGGTGTATGTTAGCTGCCTaGCTGGACTCGCTTTGCTTGTGTGACTATCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: KEYRVHRCMLAA*LDSLCLCDYPQ Trigger: TTGCGGATAGTCACACAAGCAAAGCGAGTCCAGCAAGGCAGCTAACATACACCGATGTACCCTATATTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| 3UTR CAA 72 bp | TTTCTCTTAAAACTCAGCTTGCGAATCTTAGCCCAGTaGAAGGTGTTAATCTTTGTGTTTCCCCGTAACACC | + |
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Preference number: 4 (lower is better) Translates to: FLLKLSLRILAQ*KVLIFVFPRNT Trigger: GGTGTTACGGGGAAACACAAAGATTAACACCTTCAACTGGGCTAAGATTCGCAAGCTGAGTTTTAAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR TCA 90 bp | ATGCCATACATATCCAGCTTCCTTGCTATGTCCAGTAGCAGAATGTCTGATTCATTCCATACTTACTTTTaGCTTGCTTCGTTATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: MPYISSFLAMSSSRMSDSFHTYF*LASLWA Trigger: AGCCCATAACGAAGCAAGTCAAAAGTAAGTATGGAA...TGAATCAGACATTCTGCTACTGGACATAGCAAGGAAGCTGGATATGTATGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR CAA 90 bp | ACTGTAAGATGTGCGACACCATTAAAGCTGTGCAGTTGTCACTGCATGGAAGCCTCCTTTTCAGCAAGATaGAGATGGCCGCAGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVRCATPLKLCSCHCMEASFSAR*RWPQLR Trigger: CCTGAGCTGCGGCCATCTCAATCTTGCTGAAAAGGA...GGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR CAA 90 bp | ATTTTCCTCTGCCATGATCAGAGACCGTCTGGGTACCTGGGGTGGCTTGTCCACAAGATACCCCATCCCTaGAGTGATCTTCCATACTTA | + |
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Preference number: 5 (lower is better) Translates to: IFLCHDQRPSGYLGWLVHKIPHP*SDLPYL Trigger: TAAGTATGGAAGATCACTCAAGGGATGGGGTATCTT...GTGGACAAGCCACCCCAGGTACCCAGACGGTCTCTGATCATGGCAGAGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS GCA 90 bp | CTGACTGTAAGATGTGCGACACCATTAAAGCTGTGCAGTTGTCACTaGATGGAAGCCTTCCCAGAGCCAAATCCTTCTTTATTTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LTVRCATPLKLCSCH*MEAFPEPNPSLFEE Trigger: CTCTTCAAATAAAGAAGGATTTGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060650.7 |
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| CDS-3UTR CAA 90 bp | AGGTTGTTTGGAAGGAGCTTAGAGGACTCCGCTCCTCAAAGAACTCTATGGGCTATACTTACTTTTGACTaGCTTCGTTATGGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RLFGRSLEDSAPQRTLWAILTFD*LRYGLQ Trigger: CTGAAGCCCATAACGAAGCAAGTCAAAAGTAAGTAT...AGCCCATAGAGTTCTTTGAGGAGCGGAGTCCTCTAAGCTCCTTCCAAACAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS-3UTR CAA 90 bp | TACATGCAAACAGATCGGTTTTACGAGTCAGAGCAGGACATGGTCCTAAAGGTCCTTCCATACTTACTTTaGACTTGCTTCGTTATGGGC | + |
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Preference number: 5 (lower is better) Translates to: YMQTDRFYESEQDMVLKVLPYLL*TCFVMG Trigger: GCCCATAACGAAGCAAGTCAAAAGTAAGTATGGAAG...GACCTTTAGGACCATGTCCTGCTCTGACTCGTAAAACCGATCTGTTTGCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS GCA 72 bp | AGATGTGCGACACCATTAAAGCTGTGCAGTTGTCACTaGATGGAAGCCTTCCCAGAGCCAAATCCTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RCATPLKLCSCH*MEAFPEPNPSL Trigger: TAAAGAAGGATTTGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060650.7 |
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| CDS CAA 90 bp | GAATGGCTGCAGAATTCTAGTCCAAAATATTCCTTTTCAGCAAGATaGAGATGGCCGCAGCTCAGGTTGAAGAGCGCCTTTCCAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: EWLQNSSPKYSFSAR*RWPQLRLKSAFPDD Trigger: ATCATCTGGAAAGGCGCTCTTCAACCTGAGCTGCGGCCATCTCAATCTTGCTGAAAAGGAATATTTTGGACTAGAATTCTGCAGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060650.7 ENSMUST00000164311.7 |
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| CDS CCA 72 bp | TCTAGTCCAAAATATTCCTTTTCAGCAAGATTGAGATaGCCGCAGCTCAGGTTGAAGAGCGCCTTTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSPKYSFSARLR*PQLRLKSAFPD Trigger: ATCTGGAAAGGCGCTCTTCAACCTGAGCTGCGGCCATCTCAATCTTGCTGAAAAGGAATATTTTGGACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060650.7 ENSMUST00000164311.7 |
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| CDS CAA 90 bp | CCTAATTCTGACTGTAAGATGTGCGACACCATTAAAGCTGTGCAGTaGTCACTGCATGGAAGCCTTCCCAGAGCCAAATCCTTCTTTATT | + |
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Preference number: 6 (lower is better) Translates to: PNSDCKMCDTIKAVQ*SLHGSLPRAKSFFI Trigger: AATAAAGAAGGATTTGGCTCTGGGAAGGCTTCCATGCAGTGACAACTGCACAGCTTTAATGGTGTCGCACATCTTACAGTCAGAATTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060650.7 |
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| CDS CAA 72 bp | CAGAATTCTAGTCCAAAATATTCCTTTTCAGCAAGATaGAGATGGCCGCAGCTCAGGTTGAAGAGCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QNSSPKYSFSAR*RWPQLRLKSAF Trigger: AAAGGCGCTCTTCAACCTGAGCTGCGGCCATCTCAATCTTGCTGAAAAGGAATATTTTGGACTAGAATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060650.7 ENSMUST00000164311.7 |
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| CDS CAA 72 bp | ATACCCCATCCCTTGAGTGATCTTCCATACTTACTTTaGACTTGCTTCGTTATGGGCTTCAGAAGTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: IPHPLSDLPYLL*TCFVMGFRSSN Trigger: GTTGGAACTTCTGAAGCCCATAACGAAGCAAGTCAAAAGTAAGTATGGAAGATCACTCAAGGGATGGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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| CDS GCA 72 bp | CATCCCTTGAGTGATCTTCCATACTTACTTTTGACTTaGTTCGTTATGGGCTTCAGAAGTTCCAACCAAACA | + |
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Preference number: 6 (lower is better) Translates to: HPLSDLPYLLLT*FVMGFRSSNQT Trigger: TGTTTGGTTGGAACTTCTGAAGCCCATAACGAAGCAAGTCAAAAGTAAGTATGGAAGATCACTCAAGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164311.7 |
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