Pregenerated sensors for FRMD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048285Ensembl transcript IDs: ENSMUST00000057859.9
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGATaGACTGGTGCGTCTGCCAGCCATGGACACGCTAGCAAGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SPLQIQMQVTQGGDR*TGASASHGHASKCS Trigger: GCTGCACTTGCTAGCGTGTCCATGGCTGGCAGACGCACCAGTGCATCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 90 bp | GGCCACCACGGGCTCTGGGACACTGACCTAGCCAGGGGGAAACACTaGTATGTTCTGCCTGACCCTACATCTATTTCTTCCTTACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: GHHGLWDTDLARGKH*YVLPDPTSISSLLG Trigger: TCCAAGTAAGGAAGAAATAGATGTAGGGTCAGGCAGAACATAGCAGTGTTTCCCCCTGGCTAGGTCAGTGTCCCAGAGCCCGTGGTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 90 bp | ACACAGCCAAGCAAGCAACCTTTCCATCTCTGCATCTGCAAGAGATaGCGAGGGCTGTGGGAATACACGGCCATCTGTGCTCTGGAGATC | + |
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Preference number: 1 (lower is better) Translates to: TQPSKQPFHLCICKR*RGLWEYTAICALEI Trigger: GATCTCCAGAGCACAGATGGCCGTGTATTCCCACAGCCCTCGGCATCTCTTGCAGATGCAGAGATGGAAAGGTTGCTTGCTTGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 90 bp | TGTGAAGGAGCCCAGTGTCCCGGCACACGCCTTCTGGACTCTGAGTaGGGCTTCCATCTTCCATCACATACACATCTTTGGCTAGAACAT | + |
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Preference number: 1 (lower is better) Translates to: CEGAQCPGTRLLDSE*GFHLPSHTHLWLEH Trigger: ATGTTCTAGCCAAAGATGTGTATGTGATGGAAGATGGAAGCCCCACTCAGAGTCCAGAAGGCGTGTGCCGGGACACTGGGCTCCTTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 90 bp | CACTGTCCATTTGTGAAGGAGCCCAGTGTCCCGGCACACGCCTTCTaGACTCTGAGTGGGGCTTCCATCTTCCATCACATACACATCTTT | + |
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Preference number: 1 (lower is better) Translates to: HCPFVKEPSVPAHAF*TLSGASIFHHIHIF Trigger: AAAGATGTGTATGTGATGGAAGATGGAAGCCCCACTCAGAGTCCAGAAGGCGTGTGCCGGGACACTGGGCTCCTTCACAAATGGACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | GCACTGGTGCGTCTGCCAGCCATGGACACGCTAGCAAGTGCAGCGTaGGTGACGGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGAC | + |
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Preference number: 1 (lower is better) Translates to: ALVRLPAMDTLASAA*VTALYFPPFTLEND Trigger: GTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTTGCTAGCGTGTCCATGGCTGGCAGACGCACCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 90 bp | GACAGATGCACTGGTGCGTCTGCCAGCCATGGACACGCTAGCAAGTaGAGCGTGAGTGACGGCTTTATACTTTCCTCCTTTTACTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: DRCTGASASHGHASK*SVSDGFILSSFYFG Trigger: TCCAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTTGCTAGCGTGTCCATGGCTGGCAGACGCACCAGTGCATCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | TCTGGAGATCGCGTACTTCACCAGGGTGTGGCCCCTAAGCATCTGTaGGCAATGATGAGACTATGCAATGACTCGGAAGCAAAAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: SGDRVLHQGVAPKHL*AMMRLCNDSEAKEA Trigger: GGCTTCTTTTGCTTCCGAGTCATTGCATAGTCTCATCATTGCTCACAGATGCTTAGGGGCCACACCCTGGTGAAGTACGCGATCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | ATGATGAGACTATGCAATGACTCGGAAGCAAAAGAAGCCATCAGGTaGCGGACCCCTTTGCCCTTTGCCTATCTGTGGACACTGAGACAC | + |
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Preference number: 1 (lower is better) Translates to: MMRLCNDSEAKEAIR*RTPLPFAYLWTLRH Trigger: GTGTCTCAGTGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTCACCTGATGGCTTCTTTTGCTTCCGAGTCATTGCATAGTCTCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | AACCGGAACACAAGAGATGAACAAACACACTGCAGTCTGACAGTCTaGAATCTGGGTAAAGCTGGAAAGCACACTTCCTTCCAAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: NRNTRDEQTHCSLTV*NLGKAGKHTSFQRG Trigger: GCCCCTTTGGAAGGAAGTGTGCTTTCCAGCTTTACCCAGATTTCAGACTGTCAGACTGCAGTGTGTTTGTTCATCTCTTGTGTTCCGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 90 bp | CTGAGACATTCCCAATGGTTGTTAACATACACCAGCTTTGTAAACTaGAAAATGTACCATGTCACAAGCACAGGCCAATCCCAGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LRHSQWLLTYTSFVN*KMYHVTSTGQSQSF Trigger: GAAGCTCTGGGATTGGCCTGTGCTTGTGACATGGTACATTTTGCAGTTTACAAAGCTGGTGTATGTTAACAACCATTGGGAATGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | GAATGTCAATTCTTCAAAGTGGAGCTCCACATACATATATGTCTATaGTTCTCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: ECQFFKVELHIHICL*FSRGSEMRNCFLAD Trigger: ATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGAGAATCATAGACATATATGTATGTGGAGCTCCACTTTGAAGAATTGACATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 90 bp | TTAAAAACATCTCCTAGAAAGACATTGTGCTATGAAGTTCTCTCCTaGAGGGCGAGCAACGTCTTCAATGGATATCAAGTTGACCAAACT | + |
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Preference number: 1 (lower is better) Translates to: LKTSPRKTLCYEVLS*RASNVFNGYQVDQT Trigger: AGTTTGGTCAACTTGATATCCATTGAAGACGTTGCTCGCCCTTCAGGAGAGAACTTCATAGCACAATGTCTTTCTAGGAGATGTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 90 bp | ACAAAGGAAATACAACCAAACAAATGTCTTCTGAGACATTCCCAATaGTTGTTAACATACACCAGCTTTGTAAACTGCAAAATGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: TKEIQPNKCLLRHSQ*LLTYTSFVNCKMYH Trigger: ATGGTACATTTTGCAGTTTACAAAGCTGGTGTATGTTAACAACCATTGGGAATGTCTCAGAAGACATTTGTTTGGTTGTATTTCCTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGAACCCTGCTGAGGCCGTaGCAGCACAGGAGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRTLLRP*QHRRAA Trigger: TGCTGCCCTCCTGTGCTGGCACGGCCTCAGCAGGGT...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTTACAGCTTACTTAGATACAAAGCTCACCGTTGCAAATACAGATGCAGGCCAGCAGACAGCGGCTaGCCGCAGGGCTGCCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TVYSLLRYKAHRCKYRCRPADSG*PQGCPQ Trigger: CTGCGGGCAGCCCTGCGGGCAGCCGCTGTCTGCTGG...CCTGCATCTGTATTTGCAACGGTGAGCTTTGTATCTAAGTAAGCTGTAAACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR CCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCTCTGTGAGGCAACAATaGCTATGTACTAAGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: INLPATGDWFKLAWWDPGSVRQQ*LCTKNG Trigger: GCCATTCTTAGTACATAGCCATTGTTGCCTCACAGA...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGATACTTCACCAGGGTGTaGCCCCTAAGCATCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRYFTRV*PLSICE Trigger: CTCACAGATGCTTAGGGGCCACACCCTGGTGAAGTA...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACCTCCCCCTCAAACCGTaGCTCATGAGGAAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SRGSEMRNCFLADLVFENLPLKP*LMRKWL Trigger: CAGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAG...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTTAAAAGCACTGTCCATTTGTaGAGGAGCCCAGTGTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: THSPGFIIHCNSSRPCLKSTVHL*RSPVSR Trigger: CCGGGACACTGGGCTCCTTCACAAATGGACAGTGCT...TTTAAGACAGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTCCATCTCTGCATCTGCAAGAGATGCCGAGGGCTGTGGGAATACACGGCAACACTGCTATGTTCTaGCTGACCCTACATCTATTT | + |
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Preference number: 2 (lower is better) Translates to: TFPSLHLQEMPRAVGIHGNTAMF*LTLHLF Trigger: AAATAGATGTAGGGTCAGGCAGAACATAGCAGTGTT...GCCGTGTATTCCCACAGCCCTCGGCATCTCTTGCAGATGCAGAGATGGAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTTACAGCTTACTTAGATACAAAGCTCACCGTTGCAAATACAGATGCAGGCAGGGAGGTGACAGATaGACTGGTGCGTCTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVYSLLRYKAHRCKYRCRQGGDR*TGASAS Trigger: GCTGGCAGACGCACCAGTGCATCTGTCACCTCCCTG...CCTGCATCTGTATTTGCAACGGTGAGCTTTGTATCTAAGTAAGCTGTAAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGATTCCTGGGAAGGTCATaGAAGAACAAAACAGCGGAC | + |
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Preference number: 2 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRFLGRS*KNKTAD Trigger: GTCCGCTGTTTTGTTCTTCCATGACCTTCCCAGGAA...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTACCATGTCACAAGCACAGGCCAATCCCAGAGCTTCCTGGGAAGGTCATGTCACATACACATCTTTaGCTAGAACATAAGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: NVPCHKHRPIPELPGKVMSHTHL*LEHKTP Trigger: GGGAGTCTTATGTTCTAGCCAAAGATGTGTATGTGA...CATGACCTTCCCAGGAAGCTCTGGGATTGGCCTGTGCTTGTGACATGGTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTTAAACCGGAACACAAGAGATaGACAAACACACTGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: THSPGFIIHCNSSRPCLKPEHKR*TNTLQS Trigger: AGACTGCAGTGTGTTTGTTCATCTCTTGTGTTCCGG...TTTAAGACAGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTTTATGCAATCAGGGTTaGGAATCTTGGCCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LTKLILLASLYTVTVAGPLCNQG*ESWPKA Trigger: TGCCTTTGGCCAAGATTCTCAACCCTGATTGCATAA...AGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCTGCAGTCTGACAGTCTaGAATCTGGGTAAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TSITICWPPLKTNKGNTTCSLTV*NLGKAG Trigger: TCCAGCTTTACCCAGATTTCAGACTGTCAGACTGCA...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGAGTCAATTCTTCAAAGTaGAGCTCCACATACATATAT | + |
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Preference number: 2 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRVNSSK*SSTYIY Trigger: ATATATGTATGTGGAGCTCCACTTTGAAGAATTGAC...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CAA 90 bp | GGAAAGCACACTTCCTTCCAAAGGGGCAATAGACAATCTGGGCACTaGTCTTCCTCTTACATTCTCTGTTTCTTTTACCTCTGCATAATA | + |
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Preference number: 2 (lower is better) Translates to: GKHTSFQRGNRQSGH*SSSYILCFFYLCII Trigger: TATTATGCAGAGGTAAAAGAAACAGAGAATGTAAGAGGAAGACAAGTGCCCAGATTGTCTATTGCCCCTTTGGAAGGAAGTGTGCTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CAA 90 bp | AAGTTCTCTCCTGAAGGGCGAGCAACGTCTTCAATGGATATCAAGTaGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTA | + |
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Preference number: 2 (lower is better) Translates to: KFSPEGRATSSMDIK*TKLILLASLYTVTV Trigger: TACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTTGCTCGCCCTTCAGGAGAGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACGTGCAAGACATATACTaGAGTCCAAATGAAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SRGSEMRNCFLADLVFENVQDIY*SPNEES Trigger: TGACTCTTCATTTGGACTTCAGTATATGTCTTGCAC...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTAAGCTAAGTTTGGGGTaGAAAAGTTATGGCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LTKLILLASLYTVTVAGPKLSLG*KSYGTN Trigger: ATTTGTGCCATAACTTTTTCACCCCAAACTTAGCTT...AGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGACTGCCCAATACAAGAATGTTCTTTAGTGTCAGGTaGGAGTTACTGGATGTGACC | + |
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Preference number: 2 (lower is better) Translates to: GFILSSFYFGKRLPNTRMFFSVR*ELLDVT Trigger: GGTCACATCCAGTAACTCTCACCTGACACTAAAGAA...CATTCTTGTATTGGGCAGTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR GCA 90 bp | TTGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTACCAGCTTTGTAAACTaGAAAATGTACCATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: LTKLILLASLYTVTVAGPTSFVN*KMYHVT Trigger: TGTGACATGGTACATTTTGCAGTTTACAAAGCTGGT...AGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CAA 90 bp | AAAAGCTCTCTGGACAAGTCTATTATGCAATCAGGGTTGAGAATCTaGGCCAAAGGCACACATGGAAAAGTCACTCTTAACTCTACATTT | + |
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Preference number: 2 (lower is better) Translates to: KSSLDKSIMQSGLRI*AKGTHGKVTLNSTF Trigger: AAATGTAGAGTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCTCAACCCTGATTGCATAATAGACTTGTCCAGAGAGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | AGAATCTTGGCCAAAGGCACACATGGAAAAGTCACTCTTAACTCTACATTTATCCAAACAAATGTCTTCTaGGACATTCCCAATGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RILAKGTHGKVTLNSTFIQTNVF*DIPNGC Trigger: ACAACCATTGGGAATGTCTCAGAAGACATTTGTTTG...GATAAATGTAGAGTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR-3UTR TCA 90 bp | AGAATCTTGGCCAAAGGCACACATGGAAAAGTCACTCTTAACTCTACATTTATCATACTGAAGTCCAAATaGAGAGTCACTAAGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: RILAKGTHGKVTLNSTFIILKSK*RVTKLQ Trigger: TTGAAGCTTAGTGACTCTTCATTTGGACTTCAGTAT...GATAAATGTAGAGTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CAA 90 bp | AAGGAAATACAACCAAACAAATGTCTTCTGAGACATTCCCAATGGTaGTTAACATACACCAGCTTTGTAAACTGCAAAATGTACCATGTC | + |
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Preference number: 2 (lower is better) Translates to: KEIQPNKCLLRHSQW*LTYTSFVNCKMYHV Trigger: GACATGGTACATTTTGCAGTTTACAAAGCTGGTGTATGTTAACAACCATTGGGAATGTCTCAGAAGACATTTGTTTGGTTGTATTTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 72 bp | CAAATACAGATGCAGGTGACGCAGGGAGGTGACAGATaGACTGGTGCGTCTGCCAGCCATGGACACGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: QIQMQVTQGGDR*TGASASHGHAS Trigger: GCTAGCGTGTCCATGGCTGGCAGACGCACCAGTGCATCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 72 bp | GCCCAGTGTCCCGGCACACGCCTTCTGGACTCTGAGTaGGGCTTCCATCTTCCATCACATACACATCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: AQCPGTRLLDSE*GFHLPSHTHLW Trigger: CCAAAGATGTGTATGTGATGGAAGATGGAAGCCCCACTCAGAGTCCAGAAGGCGTGTGCCGGGACACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 72 bp | GAAGAACAAAACAGCGGACAGAGCACTGTCCATTTGTaGAGGAGCCCAGTGTCCCGGCACACGCCTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: EEQNSGQSTVHL*RSPVSRHTPSG Trigger: TCCAGAAGGCGTGTGCCGGGACACTGGGCTCCTTCACAAATGGACAGTGCTCTGTCCGCTGTTTTGTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 72 bp | ACACAGCCAAGCAAGCAACCTTTCCATCTCTGCATCTaGAAGAGATGCCGAGGGCTGTGGGAATACACGGCC | + |
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Preference number: 3 (lower is better) Translates to: TQPSKQPFHLCI*KRCRGLWEYTA Trigger: GGCCGTGTATTCCCACAGCCCTCGGCATCTCTTGCAGATGCAGAGATGGAAAGGTTGCTTGCTTGGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR GCA 72 bp | AGCAAGCAACCTTTCCATCTCTGCATCTGCAAGAGATaGCGAGGGCTGTGGGAATACACGGCCATCTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SKQPFHLCICKR*RGLWEYTAICA Trigger: AGCACAGATGGCCGTGTATTCCCACAGCCCTCGGCATCTCTTGCAGATGCAGAGATGGAAAGGTTGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 72 bp | CGCGTACTTCACCAGGGTGTGGCCCCTAAGCATCTGTaGGCAATGATGAGACTATGCAATGACTCGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: RVLHQGVAPKHL*AMMRLCNDSEA Trigger: TGCTTCCGAGTCATTGCATAGTCTCATCATTGCTCACAGATGCTTAGGGGCCACACCCTGGTGAAGTACGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 72 bp | AGCACAGGCCAATCCCAGAGCTTCCTGGGAAGGTCATaGAAGAACAAAACAGCGGACAGAGCACTGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: STGQSQSFLGRS*KNKTADRALSI Trigger: AATGGACAGTGCTCTGTCCGCTGTTTTGTTCTTCCATGACCTTCCCAGGAAGCTCTGGGATTGGCCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR CCA 72 bp | ACCATGTCACAAGCACAGGCCAATCCCAGAGCTTCCTaGGAAGGTCATGGAAGAACAAAACAGCGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: TMSQAQANPRAS*EGHGRTKQRTE Trigger: CTCTGTCCGCTGTTTTGTTCTTCCATGACCTTCCCAGGAAGCTCTGGGATTGGCCTGTGCTTGTGACATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 72 bp | CTATGCAATGACTCGGAAGCAAAAGAAGCCATCAGGTaGCGGACCCCTTTGCCCTTTGCCTATCTGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: LCNDSEAKEAIR*RTPLPFAYLWT Trigger: TGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTCACCTGATGGCTTCTTTTGCTTCCGAGTCATTGCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| 3UTR TCA 72 bp | CGTCTGCCAGCCATGGACACGCTAGCAAGTGCAGCGTaGGTGACGGCTTTATACTTTCCTCCTTTTACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RLPAMDTLASAA*VTALYFPPFTL Trigger: CAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTTGCTAGCGTGTCCATGGCTGGCAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCATGTTTTAAAAGCAGACAATCTGGGCACTaGTCTTCCTCTTACATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQETGLNWPGGTRACFKSRQSGH*SSSYIL Trigger: GAGAATGTAAGAGGAAGACAAGTGCCCAGATTGTCT...GCTTTTAAAACATGCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | GACGGACCCCTTTGCCCTTTGCCTATCTGTGGACACTaGGACACTTATACATTCTGGCATCTGAAACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DGPLCPLPICGH*DTYTFWHLKLW Trigger: CCAAAGTTTCAGATGCCAGAATGTATAAGTGTCTCAGTGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGAATTATGCAATCAGGGTaGAGAATCTTGGCCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRIMQSG*RILAKG Trigger: GCCTTTGGCCAAGATTCTCAACCCTGATTGCATAAT...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR GCA 72 bp | AAAAGAAGCCATCAGGTGACGGACCCCTTTGCCCTTTaGCTATCTGTGGACACTGAGACACTTATACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: KRSHQVTDPFAL*LSVDTETLIHS Trigger: AGAATGTATAAGTGTCTCAGTGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTCACCTGATGGCTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | AACGTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATAAGAGAGAACTCCCCTTaGTCCTCCCCCTCAAACCGT | + |
|
Preference number: 3 (lower is better) Translates to: NVFNGYQVDQTHSPGFIIRENSP*SSPSNR Trigger: ACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCTCT...TATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | ACAAGAGATGAACAAACACACTGCAGTCTGACAGTCTaGAATCTGGGTAAAGCTGGAAAGCACACTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TRDEQTHCSLTV*NLGKAGKHTSF Trigger: GAAGGAAGTGTGCTTTCCAGCTTTACCCAGATTTCAGACTGTCAGACTGCAGTGTGTTTGTTCATCTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | CTGAAGGGCGAGCAACGTCTTCAATGGATATCAAGTTaGCCAAACTCATTCTCCTGGCTTCATTATACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LKGEQRLQWISS*PNSFSWLHYTL Trigger: CAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTTGCTCGCCCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CCA 72 bp | AGTGTTCATTTCGGACCAACCTCTGTGAGGCAACAATaGCTATGTACTAAGAATGGCTCTCCAGAAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVHFGPTSVRQQ*LCTKNGSPEKK Trigger: CTTCTTTTCTGGAGAGCCATTCTTAGTACATAGCCATTGTTGCCTCACAGAGGTTGGTCCGAAATGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | TCTCCTAGAAAGACATTGTGCTATGAAGTTCTCTCCTaGAGGGCGAGCAACGTCTTCAATGGATATCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPRKTLCYEVLS*RASNVFNGYQV Trigger: AACTTGATATCCATTGAAGACGTTGCTCGCCCTTCAGGAGAGAACTTCATAGCACAATGTCTTTCTAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCAGCGTGAGTGACGGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGATCAATGGATATCAAGTaGACCAAACTCATTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCSVSDGFILSSFYFGKRSMDIK*TKLILL Trigger: CAGGAGAATGAGTTTGGTCAACTTGATATCCATTGA...TCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | TTCTTCAAAGTGGAGCTCCACATACATATATGTCTATaGTTCTCCCGTGGGTCAGAAATGAGAAACTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFKVELHIHICL*FSRGSEMRNCF Trigger: GAAACAGTTTCTCATTTCTGACCCACGGGAGAATCATAGACATATATGTATGTGGAGCTCCACTTTGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CCA 72 bp | ACGACTGCCCAATACAAGAATGTCAATTCTTCAAAGTaGAGCTCCACATACATATATGTCTATGATTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TTAQYKNVNSSK*SSTYIYVYDSP Trigger: GGGAGAATCATAGACATATATGTATGTGGAGCTCCACTTTGAAGAATTGACATTCTTGTATTGGGCAGTCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCTTGGCCAAAGGCACACATGGAAAAGTCACTCTTAACTCTACATTTATCAGACATTCCCAATGGTaGTTAACATACACCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RILAKGTHGKVTLNSTFIRHSQW*LTYTSF Trigger: AAAGCTGGTGTATGTTAACAACCATTGGGAATGTCT...GATAAATGTAGAGTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCACTAAGCTTCAAACACATAAACACACAGAGTCCCACGTATCTAGATACTACAGTAAGGGTATCTaGTTAAAGCAGAAACTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RVTKLQTHKHTESHVSRYYSKGI*LKQKLA Trigger: TGCTAGTTTCTGCTTTAACAAGATACCCTTACTGTA...GTATCTAGATACGTGGGACTCTGTGTGTTTATGTGTTTGAAGCTTAGTGACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | TCTGTGGACACTGAGACACTTATACATTCTGGCATCTaGAACTTTGGTTCTTCTAAAAGCATTCAACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVDTETLIHSGI*NFGSSKSIQQK Trigger: CTTTTGTTGAATGCTTTTAGAAGAACCAAAGTTTCAGATGCCAGAATGTATAAGTGTCTCAGTGTCCACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR GCA 72 bp | GCTTTATACTTTCCTCCTTTTACTTTGGAAAACGACTaGCCAATACAAGAATGTCAATTCTTCAAAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ALYFPPFTLEND*PIQECQFFKVE Trigger: CTCCACTTTGAAGAATTGACATTCTTGTATTGGGCAGTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CCA 72 bp | TATCTTGTTAAAGCAGAAACTAGCATCACCATCTGTTaGCCACCATTAAAAACCAACAAAGGAAATACAACC | + |
|
Preference number: 3 (lower is better) Translates to: YLVKAETSITIC*PPLKTNKGNTT Trigger: GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGTTTCTGCTTTAACAAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR TCA 72 bp | AATTCTATGTGTGCAAGACATATACTGAAGTCCAAATaGAGAGTCACTAAGCTTCAAACACATAAACACACA | + |
|
Preference number: 3 (lower is better) Translates to: NSMCARHILKSK*RVTKLQTHKHT Trigger: TGTGTGTTTATGTGTTTGAAGCTTAGTGACTCTTCATTTGGACTTCAGTATATGTCTTGCACACATAGAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCTCGATGCCGGAGGTGTaGGAGCTGCTGTGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: INLPATGDWFKLAWWDPGSMPEV*ELLWLA Trigger: GGCCAGCCACAGCAGCTCCCACACCTCCGGCATCGA...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTGCTGGGTCCCGGGGCTTaGTGTCTGCCTCGATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RELPFVLPLKPCLMRKWLLGPGA*CLPRCR Trigger: CCGGCATCGAGGCAGACACCAAGCCCCGGGACCCAG...CAGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTGGGGAGCTGCCGTGGCTaGTCATGGAGCTGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RELPFVLPLKPCLMRKWLGSCRG*SWSCRS Trigger: AGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCC...CAGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCAGTCCTTCCCCCGCTTaGAAACAACCCATGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: INLPATGDWFKLAWWDPGSPSPA*KQPMPG Trigger: TCCCGGCATGGGTTGTTTCCAAGCGGGGGAAGGACT...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCAGTAGACCAGCTTCCTaGCGGAGGGAAGGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: INLPATGDWFKLAWWDPGSRPAS*RREGHL Trigger: CAGATGGCCTTCCCTCCGCCAGGAAGCTGGTCTACT...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AGCCATCAGGTGACGGACCCCTTTGCCCTTTGCCTATCTGTGGACACTGAGACAGTGTGGGAGCTGCCGTaGCTGGTCATGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHQVTDPFALCLSVDTETVWELP*LVMELQ Trigger: CTGCAGCTCCATGACCAGCCACGGCAGCTCCCACAC...TGTCTCAGTGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTCACCTGATGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTTGCCGTGGCTGGTCATaGAGCTGCAGGTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPLCPPPQTVPHEEVACRGWS*SCRSSA Trigger: AGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCA...AGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTGGTCCAGGTTGTCGCTaGTGTAGGATTCCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPLCPPPQTVPHEEVAGPGCR*CRIPGT Trigger: AGTACCGGGAATCCTACATCAGCGACAACCTGGACC...AGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | AGCCATCAGGTGACGGACCCCTTTGCCCTTTGCCTATCTGTGGACACTGAGACAGGCTGGTCATGGAGCTaGAGGTCTTCAGCTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHQVTDPFALCLSVDTETGWSWS*RSSASG Trigger: ACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCC...TGTCTCAGTGTCCACAGATAGGCAAAGGGCAAAGGGGTCCGTCACCTGATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | ACCTTTCCATCTCTGCATCTGCAAGAGATGCCGAGGGCTGTGGGAATACACGGCATGCGTCCTGTATGTTaGCACACTGCTGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFPSLHLQEMPRAVGIHGMRPVC*HTAEPG Trigger: GCCTGGCTCAGCAGTGTGTCAACATACAGGACGCAT...GCCGTGTATTCCCACAGCCCTCGGCATCTCTTGCAGATGCAGAGATGGAAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTGCGGGAAGTAAGCCTCTaGCTCAAAGTAGTCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RELPFVLPLKPCLMRKWLREVSL*LKVVSV Trigger: CACGGAGACTACTTTGAGCCAGAGGCTTACTTCCCG...CAGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTGCTGAGACCAAAGAGGTaGCTGTCCTTTAACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RELPFVLPLKPCLMRKWLLRPKR*LSFNLS Trigger: GCTCAGGTTAAAGGACAGTCACCTCTTTGGTCTCAG...CAGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | GTTATGGCACAAATAATGTGTAAAGACCCTCAGACTCCACAGCCTCCAGCAGACTGGTGTCTGCCTCGATaGCGGAGGTGTGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMAQIMCKDPQTPQPPADWCLPR*RRCGSC Trigger: GCAGCTCCCACACCTCCGGCATCGAGGCAGACACCA...GTCTGCTGGAGGCTGTGGAGTCTGAGGGTCTTTACACATTATTTGTGCCATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCATTACTGTCTCAACCTGGTACACTTTAAATCAATCTCCCAGCCACAGTGCTGTGGCTGGCCGTaGAGTGGCGGGACAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHYCLNLVHFKSISQPQCCGWP*SGGTGA Trigger: AGCGCCTGTCCCGCCACTCCACGGCCAGCCACAGCA...CTGTGGCTGGGAGATTGATTTAAAGTGTACCAGGTTGAGACAGTAATGCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACGGGAGCTGCTGTGGCTaGCCGTGGAGTGGCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSEMRNCFLADLVFENGSCCG*PWSGGT Trigger: TGTCCCGCCACTCCACGGCCAGCCACAGCAGCTCCC...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACGCTGTCTTCCGGCCCTaGGTCCCGGGGCTTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSEMRNCFLADLVFENAVFRP*VPGLGV Trigger: GACACCAAGCCCCGGGACCCAGGGCCGGAAGACAGC...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | TTGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTCCGGGGCTTGGTGTCTaGCTCGATGCCGGAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTKLILLASLYTVTVAGPPGLGV*LDAGGV Trigger: CACACCTCCGGCATCGAGGCAGACACCAAGCCCCGG...AGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCTCACGGACTTGTCATTaGGGAGGAAAATACACACTC | + |
|
Preference number: 4 (lower is better) Translates to: INLPATGDWFKLAWWDPGSRTCH*GGKYTL Trigger: GAGTGTGTATTTTCCTCCCCAATGACAAGTCCGTGA...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | AATGTACCATGTCACAAGCACAGGCCAATCCCAGAGCTTCCTGGGAAGGTCATGTACACATCTCTGGGCTaGCTTCCAGCGACTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVPCHKHRPIPELPGKVMYTSLG*LPATLQ Trigger: CTGAAGAGTCGCTGGAAGTCAGCCCAGAGATGTGTA...CATGACCTTCCCAGGAAGCTCTGGGATTGGCCTGTGCTTGTGACATGGTACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGATTGCAGTGCAAAGGCTaGCAGCAGGAAGTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRLQCKG*QQEVGL Trigger: GAGGCCTACTTCCTGCTGGCAGCCTTTGCACTGCAA...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCTCTTTTCACTGGGAATaGGTCCTGTATGTTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: INLPATGDWFKLAWWDPGSFHWE*VLYVDT Trigger: TGTGTCAACATACAGGACGCATTCCCAGTGAAAAGA...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACTCAACCCCAGAGGTGTaGGAGCTGCCGTGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSEMRNCFLADLVFENSTPEV*ELPWLV Trigger: GACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGA...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTTAAACGGGACAGGCGCTTATaGTTCACGCTGCCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THSPGFIIHCNSSRPCLKRDRRL*FTLPAL Trigger: CAGCGCTGGCAGCGTGAAGCATAAGCGCCTGTCCCG...TTTAAGACAGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | GTTATGGCACAAATAATGTGTAAAGACCCTCAGACTCCACAGCCTCCAGCAGACGACTGTCCTTTAACCTaGGCAGGTCACACACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VMAQIMCKDPQTPQPPADDCPLT*AGHTPG Trigger: TCCAGGTGTGTGACCTGCTCAGGTTAAAGGACAGTC...GTCTGCTGGAGGCTGTGGAGTCTGAGGGTCTTTACACATTATTTGTGCCATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGCATTACTGTCTCAACCTGGTACACTTTAAATCAATCTCCCAGCCACAGGATGTTGACACACTGCTaGGCCAGGCAGCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCITVSTWYTLNQSPSHRMLTHC*ARQLLQ Trigger: CTGCAACAGCTGCCTGGCTCAGCAGTGTGTCAACAT...CCTGTGGCTGGGAGATTGATTTAAAGTGTACCAGGTTGAGACAGTAATGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACAGAGGCGGTGGCTGTTaGTCAGGAGCTGCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSEMRNCFLADLVFENRGGGC*SGAAGD Trigger: ATCTCCTGCAGCTCCTGAGCAACAGCCACCGCCTCT...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTGGCCAAAGGCACACATGGAAAAGTCACTCTTAACTCTACATTTATCTGGCTGGCCGTGGAGTaGCGGGACAGGCGCTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: RILAKGTHGKVTLNSTFIWLAVE*RDRRLC Trigger: GCATAAGCGCCTGTCCCGCCACTCCACGGCCAGCCA...GATAAATGTAGAGTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGAGGCTATGGCGATCGGTaGAAGTCTTTGGTTTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRGYGDR*KSLVFD Trigger: GTCGAAAACCAAAGACTTCCACCGATCGCCATAGCC...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCGCTTATGCTTCACGCTaGCAGCGCTGCTCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSITICWPPLKTNKGNTTAYASR*QRCSHW Trigger: CCAGTGGGAGCAGCGCTGGCAGCGTGAAGCATAAGC...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGACTGCCCAATACAAGAATGCAGAGGTGTGGGAGCTaGCGTGGCTGGTCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFILSSFYFGKRLPNTRMQRCGS*RGWSWS Trigger: GCTCCATGACCAGCCACGGCAGCTCCCACACCTCTG...CATTCTTGTATTGGGCAGTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGCGTGAGTGACGGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGAGAGGTCAGCTTGCAGTaGAAAGGCTGCCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCSVSDGFILSSFYFGKREVSLQ*KGCQQE Trigger: TTCCTGCTGGCAGCCTTTGCACTGCAAGCTGACCTC...TCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | AACGTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACTGTTGCTCAGGAGCTaGAGGAGATGCCGGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NVFNGYQVDQTHSPGFIILLLRS*RRCRER Trigger: GCGCTCCCGGCATCTCCTGCAGCTCCTGAGCAACAG...TATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | AACGTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACATTCTCCTCCTGCTTaGGGAGGTGGCGCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NVFNGYQVDQTHSPGFIIHSPPA*GGGAGR Trigger: CCGTCCTGCGCCACCTCCGCAAGCAGGAGGAGAATG...TATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAGCTCACCGTTGCAAATACAGATGCAGGTGACGCAGGGAGGTGACAGACCAGAGAAAAGTACTTaGTGGCTCTTTTCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSSPLQIQMQVTQGGDRPEKST*WLFSLG Trigger: TCCCAGTGAAAAGAGCCAGCAAGTACTTTTCTCTGG...TCTGTCACCTCCCTGCGTCACCTGCATCTGTATTTGCAACGGTGAGCTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | TTGACCAAACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTGTAGTAATGGATaGCGACGTCGTCCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTKLILLASLYTVTVAGPVCSNG*RRRPVG Trigger: TCCGACTGGACGACGTCGCCATCCATTACTACAGAC...AGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCAGCACACACTGGGAGTaGAGCACCTGTTTCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSITICWPPLKTNKGNTTSTHWE*STCFRR Trigger: CCTACGGAAACAGGTGCTGCACTCCCAGTGTGTGCT...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | TACTTTGGAAAACGACTGCCCAATACAAGAATGTCAATTCTTCAAAGTGGAGCTGACACAGGCCCGCGATaGGCAGGAAGTCTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFGKRLPNTRMSILQSGADTGPR*AGSLSG Trigger: ACCAGAAAGACTTCCTGCGCATCGCGGGCCTGTGTC...AGCTCCACTTTGAAGAATTGACATTCTTGTATTGGGCAGTCGTTTTCCAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACGTAGATACACATCTCTaGGCTGACTTCCAGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSEMRNCFLADLVFENVDTHL*ADFQRL Trigger: GAGTCGCTGGAAGTCAGCCCAGAGATGTGTATCTAC...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | ACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTTAAAGGTGCAGTTTCCTTTTaGAGTTGCCGAGGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: THSPGFIIHCNSSRPCLKGAVSF*SCRGQL Trigger: AAGCTGACCTCGGCAACTTCAAAAGGAAACTGCACC...TTTAAGACAGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCACTAAGCTTCAAACACATAAACACACAGAGTCCCACGTATCTAGATACCAAGTGACTTCGTATTaGCGTACCTTGCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTKLQTHKHTESHVSRYQVTSY*RTLLAS Trigger: GGAGGCCAGCAAGGTACGGCAATACGAAGTCACTTG...GTATCTAGATACGTGGGACTCTGTGTGTTTATGTGTTTGAAGCTTAGTGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACACGCCGTCAGGGCAAACTaGTCCTTGTGCATGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFNGYQVDQTHSPGFIIHAVRAN*SLCMFG Trigger: CCCAAACATGCACAAGGACCAGTTTGCCCTGACGGC...GTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCTCTGGGACTTCGTCGTaGGTAAGGTCCAGAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSITICWPPLKTNKGNTTSGTSS*VRSREK Trigger: CTTTTCTCTGGACCTTACTCACGACGAAGTCCCAGA...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | ACTCATTCTCCTGGCTTCATTATACACTGTAACAGTAGCAGGCCCTGTCTTAAACGCAGGAAGTCTTTCTaGTACAGTCTGATGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: THSPGFIIHCNSSRPCLKRRKSF*YSLMSS Trigger: TGACGACATCAGACTGTACCAGAAAGACTTCCTGCG...TTTAAGACAGGGCCTGCTACTGTTACAGTGTATAATGAAGCCAGGAGAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CAA 72 bp | CCTGAAGGGCGAGCAACGTCTTCAATGGATATCAAGTaGACCAAACTCATTCTCCTGGCTTCATTATACACT | + |
|
Preference number: 4 (lower is better) Translates to: PEGRATSSMDIK*TKLILLASLYT Trigger: AGTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTTGCTCGCCCTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGCGTGAGTGACGGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGAGGAGGGAAGGCCATCTaGCAAAATCTCAAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCSVSDGFILSSFYFGKRGGKAI*QNLKLL Trigger: AAGAAGTTTGAGATTTTGCCAGATGGCCTTCCCTCC...TCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCCGTCACTCACGCTGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CAA 72 bp | CTGGACAAGTCTATTATGCAATCAGGGTTGAGAATCTaGGCCAAAGGCACACATGGAAAAGTCACTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LDKSIMQSGLRI*AKGTHGKVTLN Trigger: GTTAAGAGTGACTTTTCCATGTGTGCCTTTGGCCAAGATTCTCAACCCTGATTGCATAATAGACTTGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CAA 72 bp | AAAAGCTCTCTGGACAAGTCTATTATGCAATCAGGGTaGAGAATCTTGGCCAAAGGCACACATGGAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLDKSIMQSG*RILAKGTHGKV Trigger: GACTTTTCCATGTGTGCCTTTGGCCAAGATTCTCAACCCTGATTGCATAATAGACTTGTCCAGAGAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCATTACTGTCTCAACCTGGTACACTTTAAATCAATCTCCCAGCCACAGTGGACCAGCAACTGGTaGCACAGAATTTTAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVHYCLNLVHFKSISQPQWTSNW*HRILTF Trigger: AAATGTTAAAATTCTGTGTCACCAGTTGCTGGTCCA...CTGTGGCTGGGAGATTGATTTAAAGTGTACCAGGTTGAGACAGTAATGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCGCAAACTGGTCCTTGTaGATGTTTGGGATGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSITICWPPLKTNKGNTTANWSL*MFGMCF Trigger: GAAACACATCCCAAACATGCACAAGGACCAGTTTGC...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGACTGCCCAATACAAGAATGGCTGGCTCTTTTCACTaGGAATGCGTCCTGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFILSSFYFGKRLPNTRMAGSFH*ECVLYV Trigger: AACATACAGGACGCATTCCCAGTGAAAAGAGCCAGC...CATTCTTGTATTGGGCAGTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGAAAACGACTGCCCAATACAAGAATGTCAATTCTTCAAAGTGGAGCTGGAGCATATCTTCCGTaGTGTAGATACACATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFGKRLPNTRMSILQSGAGAYLP*CRYTSL Trigger: CAGAGATGTGTATCTACATCACGGAAGATATGCTCC...AGCTCCACTTTGAAGAATTGACATTCTTGTATTGGGCAGTCGTTTTCCAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACACGTCCTTGTGCATGTTTaGGATGTGTTTCAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VFNGYQVDQTHSPGFIIHVLVHV*DVFQDV Trigger: TACATCCTGAAACACATCCCAAACATGCACAAGGAC...GTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACACATCGGTGGAAGTCTTTaGTTTTCGACATATCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFNGYQVDQTHSPGFIIHIGGSL*FSTYRL Trigger: CAGACGATATGTCGAAAACCAAAGACTTCCACCGAT...GTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTTATACTTTCCTCCTTTTACTTTGGAAAACGACTGCCCAATACAAGAATGGAGAAAAGTACTTGCTaGCTCTTTTCACTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GFILSSFYFGKRLPNTRMEKSTC*LFSLGM Trigger: CATTCCCAGTGAAAAGAGCCAGCAAGTACTTTTCTC...CATTCTTGTATTGGGCAGTCGTTTTCCAAAGTAAAAGGAGGAAAGTATAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| 3UTR CAA 72 bp | CAACCAAACAAATGTCTTCTGAGACATTCCCAATGGTaGTTAACATACACCAGCTTTGTAAACTGCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPNKCLLRHSQW*LTYTSFVNCKM Trigger: CATTTTGCAGTTTACAAAGCTGGTGTATGTTAACAACCATTGGGAATGTCTCAGAAGACATTTGTTTGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | TGGCGCTGCCTGAACAGCTGTCTTCCGGCCCTGGGTCCCGGGGCTTaGTGTCTGCCTCGATGCCGGAGGTGTGGGAGCTGCTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WRCLNSCLPALGPGA*CLPRCRRCGSCCGW Trigger: CCAGCCACAGCAGCTCCCACACCTCCGGCATCGAGGCAGACACCAAGCCCCGGGACCCAGGGCCGGAAGACAGCTGTTCAGGCAGCGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | GGTGGCGCAGGACGGGCTGCAGGTTCATGTAGAGGCGGTGGCTGTTaGTCAGGAGCTGCAGGAGATGCCGGGAGCGCGTGGGACACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAGRAAGSCRGGGC*SGAAGDAGSAWDTL Trigger: CAGGGTGTCCCACGCGCTCCCGGCATCTCCTGCAGCTCCTGAGCAACAGCCACCGCCTCTACATGAACCTGCAGCCCGTCCTGCGCCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | GAGCTGCCGTGGCTGGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTaGATGGCGCTGCCTGAACAGCTGTCTTCCGGCCCTGGGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELPWLVMELQVFSFR*MALPEQLSSGPGSR Trigger: CCGGGACCCAGGGCCGGAAGACAGCTGTTCAGGCAGCGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | GGCGGTGGCTGTTGCTCAGGAGCTGCAGGAGATGCCGGGAGCGCGTaGGACACCCTGTGTAGTAGACCAGCTTCCTGGCGGAGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGCCSGAAGDAGSA*DTLCSRPASWRREG Trigger: GCCTTCCCTCCGCCAGGAAGCTGGTCTACTACACAGGGTGTCCCACGCGCTCCCGGCATCTCCTGCAGCTCCTGAGCAACAGCCACCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | TGCCGTGGCTGGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTGCATaGCGCTGCCTGAACAGCTGTCTTCCGGCCCTGGGTCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRGWSWSCRSSASGA*RCLNSCLPALGPGA Trigger: AGCCCCGGGACCCAGGGCCGGAAGACAGCTGTTCAGGCAGCGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | CCGTGGAGTGGCGGGACAGGCGCTTATGCTTCACGCTGCCAGCGCTaGTCCCACTGGCTCGGGACCGCTTTTCCAGCGGGTCCATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PWSGGTGAYASRCQR*SHWLGTAFPAGPCQ Trigger: TTGACATGGACCCGCTGGAAAAGCGGTCCCGAGCCAGTGGGAGCAGCGCTGGCAGCGTGAAGCATAAGCGCCTGTCCCGCCACTCCACGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | GGCTGGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTGCATGGCGCTaGCTGAACAGCTGTCTTCCGGCCCTGGGTCCCGGGGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWSWSCRSSASGAWR*LNSCLPALGPGAWC Trigger: ACACCAAGCCCCGGGACCCAGGGCCGGAAGACAGCTGTTCAGGCAGCGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | CCAGGCGGTCTTTGCCTCCACTCTCAACCCCAGAGGTGTGGGAGCTaGCGTGGCTGGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGGLCLHSQPQRCGS*RGWSWSCRSSASGA Trigger: TGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAGACCGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | CTTTGCCTCCACTCTCAACCCCAGAGGTGTGGGAGCTGCCGTGGCTaGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTGCATGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LCLHSQPQRCGSCRG*SWSCRSSASGAWRC Trigger: GCAGCGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | CGGTCTTTGCCTCCACTCTCAACCCCAGAGGTGTGGGAGCTGCCGTaGCTGGTCATGGAGCTGCAGGTCTTCAGCTTCCGGTGCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RSLPPLSTPEVWELP*LVMELQVFSFRCMA Trigger: CGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAGACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | TCCTCTTCCAGGCGGTCTTTGCCTCCACTCTCAACCCCAGAGGTGTaGGAGCTGCCGTGGCTGGTCATGGAGCTGCAGGTCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRRSLPPLSTPEV*ELPWLVMELQVFSF Trigger: GAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | GATGCCGGGAGCGCGTGGGACACCCTGTGTAGTAGACCAGCTTCCTaGCGGAGGGAAGGCCATCTGGCAAAATCTCAAACTTCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DAGSAWDTLCSRPAS*RREGHLAKSQTSCP Trigger: TGGGCAAGAAGTTTGAGATTTTGCCAGATGGCCTTCCCTCCGCCAGGAAGCTGGTCTACTACACAGGGTGTCCCACGCGCTCCCGGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS GCA 90 bp | TCCAGGTCCCTGGGGTCATCCACCAGCATCTCGATTTCCTCATCTTaGGAGTCCTCTTCCAGGCGGTCTTTGCCTCCACTCTCAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSLGSSTSISISSS*ESSSRRSLPPLSTP Trigger: TGGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAATCGAGATGCTGGTGGATGACCCCAGGGACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS TCA 90 bp | GACATATCGTCTGTGGAAGGGAGTCGGTGCTCTGTCCACGCAGCCTaGCAACCGTTTCCGAAGAGCTGGAGGTGGAGGAGCCGATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DISSVEGSRCSVHAA*QPFPKSWRWRSRFL Trigger: AAGAAATCGGCTCCTCCACCTCCAGCTCTTCGGAAACGGTTGTCAGGCTGCGTGGACAGAGCACCGACTCCCTTCCACAGACGATATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS TCA 90 bp | CCTGACACAGGCCCGCGATGCGCAGGAAGTCTTTCTGGTACAGTCTaGTGTCGTCAAGGCTCAGGCTATGGCGATCGGTGGAAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PDTGPRCAGSLSGTV*CRQGSGYGDRWKSL Trigger: CAAAGACTTCCACCGATCGCCATAGCCTGAGCCTTGACGACATCAGACTGTACCAGAAAGACTTCCTGCGCATCGCGGGCCTGTGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS TCA 90 bp | GTCTGTAGTAATGGATGGCGACGTCGTCCAGTCGGACGGCTTCTTTaGTGTACTTTAGGTAGGCCTCGGAGGCCGTCAGGGCAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCSNGWRRRPVGRLL*CTLGRPRRPSGQTG Trigger: ACCAGTTTGCCCTGACGGCCTCCGAGGCCTACCTAAAGTACATCAAAGAAGCCGTCCGACTGGACGACGTCGCCATCCATTACTACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | GTAGGCCTCGGAGGCCGTCAGGGCAAACTGGTCCTTGTGCATGTTTaGGATGTGTTTCAGGATGTAGTCCTTCCCCCGCTTGGAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGLGGRQGKLVLVHV*DVFQDVVLPPLGNN Trigger: GTTGTTTCCAAGCGGGGGAAGGACTACATCCTGAAACACATCCCAAACATGCACAAGGACCAGTTTGCCCTGACGGCCTCCGAGGCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS-3UTR CAA 90 bp | ATCAATCTCCCAGCCACAGGAGACTGGTTTAAACTGGCCTGGTGGGACCCGGGCAGGGCAAACTGGTCCTaGTGCATGTTTGGGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: INLPATGDWFKLAWWDPGRANWS*CMFGMC Trigger: ACACATCCCAAACATGCACAAGGACCAGTTTGCCCT...GCCCGGGTCCCACCAGGCCAGTTTAAACCAGTCTCCTGTGGCTGGGAGATTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | GTCCTTCCCCCGCTTGGAAACAACCCATGCCGGGAAGTAAGCCTCTaGCTCAAAGTAGTCTCCGTGGTGCAGTTTCCTTTTGAAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLPPLGNNPCREVSL*LKVVSVVQFPFEVA Trigger: GGCAACTTCAAAAGGAAACTGCACCACGGAGACTACTTTGAGCCAGAGGCTTACTTCCCGGCATGGGTTGTTTCCAAGCGGGGGAAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
||
| CDS CCA 90 bp | CTTCCTCGACAGGAGCATATCTTCCGTGATGTAGATACACATCTCTaGGCTGACTTCCAGCGACTCTTCAGGCATCGGCTCCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRQEHIFRDVDTHL*ADFQRLFRHRLQVP Trigger: AGGGACCTGGAGCCGATGCCTGAAGAGTCGCTGGAAGTCAGCCCAGAGATGTGTATCTACATCACGGAAGATATGCTCCTGTCGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 90 bp | GCTATGGCGATCGGTGGAAGTCTTTGGTTTTCGACATATCGTCTGTaGAAGGGAGTCGGTGCTCTGTCCACGCAGCCTGACAACCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: AMAIGGSLWFSTYRL*KGVGALSTQPDNRF Trigger: GAAACGGTTGTCAGGCTGCGTGGACAGAGCACCGACTCCCTTCCACAGACGATATGTCGAAAACCAAAGACTTCCACCGATCGCCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 90 bp | AGTAAGCCTCTGGCTCAAAGTAGTCTCCGTGGTGCAGTTTCCTTTTaGAGTTGCCGAGGTCAGCTTGCAGTGCAAAGGCTGCCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SKPLAQSSLRGAVSF*SCRGQLAVQRLPAG Trigger: TCCTGCTGGCAGCCTTTGCACTGCAAGCTGACCTCGGCAACTTCAAAAGGAAACTGCACCACGGAGACTACTTTGAGCCAGAGGCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 90 bp | GGGACCGCTTTTCCAGCGGGTCCATGTCAAGGTCCAGGTTGTCGCTaGTGTAGGATTCCCGGTACTGCTTTTTCTCTTCATTCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GTAFPAGPCQGPGCR*CRIPGTAFSLHSPP Trigger: AGGAGGAGAATGAAGAGAAAAAGCAGTACCGGGAATCCTACATCAGCGACAACCTGGACCTTGACATGGACCCGCTGGAAAAGCGGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | GAGAGAACTCCCCTTTGTCCTCCCCCTCAAACCGTGCCTCATGAGGAAGTGGCTCCAACTTCCCAACATTaGTCCAGGGGAAATCATAGA | + |
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Preference number: 5 (lower is better) Translates to: ERTPLCPPPQTVPHEEVAPTSQH*SRGNHR Trigger: TCTATGATTTCCCCTGGACAAATGTTGGGAAGTTGG...AGCCACTTCCTCATGAGGCACGGTTTGAGGGGGAGGACAAAGGGGAGTTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | ACTAGCATCACCATCTGTTGGCCACCATTAAAAACCAACAAAGGAAATACAACCTCATTCTCCTCCTGCTaGCGGAGGTGGCGCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: TSITICWPPLKTNKGNTTSFSSC*RRWRRT Trigger: CGTCCTGCGCCACCTCCGCAAGCAGGAGGAGAATGA...GGTTGTATTTCCTTTGTTGGTTTTTAATGGTGGCCAACAGATGGTGATGCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | TCCCGTGGGTCAGAAATGAGAAACTGTTTCCTGGCTGATCTTGTCTTTGAAAACTCTTCCAGGCGGTCTTaGCCTCCACTCTCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: SRGSEMRNCFLADLVFENSSRRS*PPLSTP Trigger: TGGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGA...GTTTTCAAAGACAAGATCAGCCAGGAAACAGTTTCTCATTTCTGACCCACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 90 bp | AGGAAGTCTTTCTGGTACAGTCTGATGTCGTCAAGGCTCAGGCTATaGCGATCGGTGGAAGTCTTTGGTTTTCGACATATCGTCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RKSFWYSLMSSRLRL*RSVEVFGFRHIVCG Trigger: TCCACAGACGATATGTCGAAAACCAAAGACTTCCACCGATCGCCATAGCCTGAGCCTTGACGACATCAGACTGTACCAGAAAGACTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | TACTTTGGAAAACGACTGCCCAATACAAGAATGTCAATTCTTCAAAGTGGAGCTCCAAGTGACTTCGTATaGCCGTACCTTGCTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: YFGKRLPNTRMSILQSGAPSDFV*PYLAGL Trigger: GAGGCCAGCAAGGTACGGCAATACGAAGTCACTTGG...AGCTCCACTTTGAAGAATTGACATTCTTGTATTGGGCAGTCGTTTTCCAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | ACTGTTTACAGCTTACTTAGATACAAAGCTCACCGTTGCAAATACAGATGCAGGTCCTGCATGGCTTTGTaGTTATGGAAGGTCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TVYSLLRYKAHRCKYRCRSCMAL*LWKVSL Trigger: CAAACTGACCTTCCATAACAACAAAGCCATGCAGGA...CCTGCATCTGTATTTGCAACGGTGAGCTTTGTATCTAAGTAAGCTGTAAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | ACTGTGCATTACTGTCTCAACCTGGTACACTTTAAATCAATCTCCCAGCCACAGAAAATCTCAAACTTCTaGCCCACAAACACCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: TVHYCLNLVHFKSISQPQKISNF*PTNTNF Trigger: GAAGTTGGTGTTTGTGGGCAAGAAGTTTGAGATTTT...CTGTGGCTGGGAGATTGATTTAAAGTGTACCAGGTTGAGACAGTAATGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | GTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATACACATGATGCTCACGGACTaGTCATTGGGGAGGAAAATA | + |
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Preference number: 5 (lower is better) Translates to: VFNGYQVDQTHSPGFIIHMMLTD*SLGRKI Trigger: TATTTTCCTCCCCAATGACAAGTCCGTGAGCATCAT...GTGTATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | AACGTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATAAGTTTCCTTTTGAAGTaGCCGAGGTCAGCTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: NVFNGYQVDQTHSPGFIISFLLK*PRSACS Trigger: ACTGCAAGCTGACCTCGGCAACTTCAAAAGGAAACT...TATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS-3UTR CAA 90 bp | AACGTCTTCAATGGATATCAAGTTGACCAAACTCATTCTCCTGGCTTCATTATAGGTCCTTGTGCATGTTaGGGATGTGTTTCAGGATGT | + |
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Preference number: 5 (lower is better) Translates to: NVFNGYQVDQTHSPGFIIGPCAC*GCVSGC Trigger: ACATCCTGAAACACATCCCAAACATGCACAAGGACC...TATAATGAAGCCAGGAGAATGAGTTTGGTCAACTTGATATCCATTGAAGACGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | GCTGTCTTCCGGCCCTGGGTCCCGGGGCTTGGTGTCTaGCTCGATGCCGGAGGTGTGGGAGCTGCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVFRPWVPGLGV*LDAGGVGAAVA Trigger: AGCCACAGCAGCTCCCACACCTCCGGCATCGAGGCAGACACCAAGCCCCGGGACCCAGGGCCGGAAGACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | GGCGGGACAGGCGCTTATGCTTCACGCTGCCAGCGCTaGTCCCACTGGCTCGGGACCGCTTTTCCAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGTGAYASRCQR*SHWLGTAFPAG Trigger: ACCCGCTGGAAAAGCGGTCCCGAGCCAGTGGGAGCAGCGCTGGCAGCGTGAAGCATAAGCGCCTGTCCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | CTGAACAGCTGTCTTCCGGCCCTGGGTCCCGGGGCTTaGTGTCTGCCTCGATGCCGGAGGTGTGGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LNSCLPALGPGA*CLPRCRRCGSC Trigger: GCAGCTCCCACACCTCCGGCATCGAGGCAGACACCAAGCCCCGGGACCCAGGGCCGGAAGACAGCTGTTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | GGACGGGCTGCAGGTTCATGTAGAGGCGGTGGCTGTTaGTCAGGAGCTGCAGGAGATGCCGGGAGCGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRAAGSCRGGGC*SGAAGDAGSAW Trigger: CCACGCGCTCCCGGCATCTCCTGCAGCTCCTGAGCAACAGCCACCGCCTCTACATGAACCTGCAGCCCGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | CAGAGGTGTGGGAGCTGCCGTGGCTGGTCATGGAGCTaGAGGTCTTCAGCTTCCGGTGCATGGCGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QRCGSCRGWSWS*RSSASGAWRCL Trigger: CAGGCAGCGCCATGCACCGGAAGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | GGCGCTTATGCTTCACGCTGCCAGCGCTGCTCCCACTaGCTCGGGACCGCTTTTCCAGCGGGTCCATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: GAYASRCQRCSH*LGTAFPAGPCQ Trigger: TTGACATGGACCCGCTGGAAAAGCGGTCCCGAGCCAGTGGGAGCAGCGCTGGCAGCGTGAAGCATAAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 72 bp | TCTGTGGAAGGGAGTCGGTGCTCTGTCCACGCAGCCTaGCAACCGTTTCCGAAGAGCTGGAGGTGGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SVEGSRCSVHAA*QPFPKSWRWRS Trigger: GCTCCTCCACCTCCAGCTCTTCGGAAACGGTTGTCAGGCTGCGTGGACAGAGCACCGACTCCCTTCCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | CTTTGCCTCCACTCTCAACCCCAGAGGTGTGGGAGCTaGCGTGGCTGGTCATGGAGCTGCAGGTCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LCLHSQPQRCGS*RGWSWSCRSSA Trigger: AGCTGAAGACCTGCAGCTCCATGACCAGCCACGGCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 72 bp | GGCCCGCGATGCGCAGGAAGTCTTTCTGGTACAGTCTaGTGTCGTCAAGGCTCAGGCTATGGCGATCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPRCAGSLSGTV*CRQGSGYGDRW Trigger: CCACCGATCGCCATAGCCTGAGCCTTGACGACATCAGACTGTACCAGAAAGACTTCCTGCGCATCGCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CAA 90 bp | CTCCAGGTCCCTGGGGTCATCCACCAGCATCTCGATTTCCTCATCTaGCGAGTCCTCTTCCAGGCGGTCTTTGCCTCCACTCTCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: LQVPGVIHQHLDFLI*RVLFQAVFASTLNP Trigger: GGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAATCGAGATGCTGGTGGATGACCCCAGGGACCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 72 bp | AATGGATGGCGACGTCGTCCAGTCGGACGGCTTCTTTaGTGTACTTTAGGTAGGCCTCGGAGGCCGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NGWRRRPVGRLL*CTLGRPRRPSG Trigger: CCCTGACGGCCTCCGAGGCCTACCTAAAGTACATCAAAGAAGCCGTCCGACTGGACGACGTCGCCATCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | GATTCCCGGTACTGCTTTTTCTCTTCATTCTCCTCCTaGTTGCGGAGGTGGCGCAGGACGGGCTGCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: DSRYCFFSSFSS*LRRWRRTGCRF Trigger: GAACCTGCAGCCCGTCCTGCGCCACCTCCGCAAGCAGGAGGAGAATGAAGAGAAAAAGCAGTACCGGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | TTTCCTCATCTTGCGAGTCCTCTTCCAGGCGGTCTTTaGCTCCACTCTCAACCCCAGAGGTGTGGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FPHLASPLPGGL*LHSQPQRCGSC Trigger: GCAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | CTGGGGTCATCCACCAGCATCTCGATTTCCTCATCTTaGGAGTCCTCTTCCAGGCGGTCTTTGCCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LGSSTSISISSS*ESSSRRSLPPL Trigger: GAGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAATCGAGATGCTGGTGGATGACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | AGCGCGTGGGACACCCTGTGTAGTAGACCAGCTTCCTaGCGGAGGGAAGGCCATCTGGCAAAATCTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SAWDTLCSRPAS*RREGHLAKSQT Trigger: AGTTTGAGATTTTGCCAGATGGCCTTCCCTCCGCCAGGAAGCTGGTCTACTACACAGGGTGTCCCACGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CAA 72 bp | CGGAGGCCGTCAGGGCAAACTGGTCCTTGTGCATGTTaGGGATGTGTTTCAGGATGTAGTCCTTCCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: RRPSGQTGPCAC*GCVSGCSPSPA Trigger: AGCGGGGGAAGGACTACATCCTGAAACACATCCCAAACATGCACAAGGACCAGTTTGCCCTGACGGCCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CAA 72 bp | ATTTCCTCATCTTGCGAGTCCTCTTCCAGGCGGTCTTaGCCTCCACTCTCAACCCCAGAGGTGTGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ISSSCESSSRRS*PPLSTPEVWEL Trigger: CAGCTCCCACACCTCTGGGGTTGAGAGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CAA 72 bp | CCTGGGGTCATCCACCAGCATCTCGATTTCCTCATCTaGCGAGTCCTCTTCCAGGCGGTCTTTGCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: PGVIHQHLDFLI*RVLFQAVFAST Trigger: AGTGGAGGCAAAGACCGCCTGGAAGAGGACTCGCAAGATGAGGAAATCGAGATGCTGGTGGATGACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | GGAGGCCGTCAGGGCAAACTGGTCCTTGTGCATGTTTaGGATGTGTTTCAGGATGTAGTCCTTCCCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGRQGKLVLVHV*DVFQDVVLPPL Trigger: AAGCGGGGGAAGGACTACATCCTGAAACACATCCCAAACATGCACAAGGACCAGTTTGCCCTGACGGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | ATCGGTGGAAGTCTTTGGTTTTCGACATATCGTCTGTaGAAGGGAGTCGGTGCTCTGTCCACGCAGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: IGGSLWFSTYRL*KGVGALSTQPD Trigger: GTCAGGCTGCGTGGACAGAGCACCGACTCCCTTCCACAGACGATATGTCGAAAACCAAAGACTTCCACCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | CCGCTTGGAAACAACCCATGCCGGGAAGTAAGCCTCTaGCTCAAAGTAGTCTCCGTGGTGCAGTTTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLGNNPCREVSL*LKVVSVVQFPF Trigger: AAAAGGAAACTGCACCACGGAGACTACTTTGAGCCAGAGGCTTACTTCCCGGCATGGGTTGTTTCCAAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | CAGGAGCATATCTTCCGTGATGTAGATACACATCTCTaGGCTGACTTCCAGCGACTCTTCAGGCATCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QEHIFRDVDTHL*ADFQRLFRHRL Trigger: GAGCCGATGCCTGAAGAGTCGCTGGAAGTCAGCCCAGAGATGTGTATCTACATCACGGAAGATATGCTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CAA 72 bp | GGGCCCAAACTGGTCGATGCCCCAAGTGACTTCGTATaGCCGTACCTTGCTGGCCTCCTTTTTCCATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GPKLVDAPSDFV*PYLAGLLFPFF Trigger: AAAGAATGGAAAAAGGAGGCCAGCAAGGTACGGCAATACGAAGTCACTTGGGGCATCGACCAGTTTGGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | GGCCCAAACTGGTCGATGCCCCAAGTGACTTCGTATTaGCGTACCTTGCTGGCCTCCTTTTTCCATTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPNWSMPQVTSY*RTLLASFFHSF Trigger: AAAAGAATGGAAAAAGGAGGCCAGCAAGGTACGGCAATACGAAGTCACTTGGGGCATCGACCAGTTTGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 72 bp | TTTCCAGCGGGTCCATGTCAAGGTCCAGGTTGTCGCTaGTGTAGGATTCCCGGTACTGCTTTTTCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPAGPCQGPGCR*CRIPGTAFSLH Trigger: ATGAAGAGAAAAAGCAGTACCGGGAATCCTACATCAGCGACAACCTGGACCTTGACATGGACCCGCTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | TCACGGACTTGTCATTGGGGAGGAAAATACACACTCTaGGACGGTCCTGCATGGCTTTGTTGTTATGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTCHWGGKYTL*DGPAWLCCYGR Trigger: CCTTCCATAACAACAAAGCCATGCAGGACCGTCGCAGAGTGTGTATTTTCCTCCCCAATGACAAGTCCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS CCA 72 bp | TTCTGGTACAGTCTGATGTCGTCAAGGCTCAGGCTATaGCGATCGGTGGAAGTCTTTGGTTTTCGACATATC | + |
|
Preference number: 6 (lower is better) Translates to: FWYSLMSSRLRL*RSVEVFGFRHI Trigger: GATATGTCGAAAACCAAAGACTTCCACCGATCGCCATAGCCTGAGCCTTGACGACATCAGACTGTACCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS TCA 72 bp | GGTGCCAGTAATAATAGTATCTTGCAATTCGGTCACTaGTCAGCTTCCCATTCTCCACGTAGTACTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GASNNSILQFGH*SASHSPRSTAP Trigger: GGGTGCAGTACTACGTGGAGAATGGGAAGCTGATCAGTGACCGAATTGCAAGATACTATTATTACTGGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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| CDS GCA 72 bp | TCATTGGGGAGGAAAATACACACTCTGCGACGGTCCTaGATGGCTTTGTTGTTATGGAAGGTCAGTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SLGRKIHTLRRS*MALLLWKVSLF Trigger: GAACAAACTGACCTTCCATAACAACAAAGCCATGCAGGACCGTCGCAGAGTGTGTATTTTCCTCCCCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057859.9 |
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