RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMD4A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026657

Ensembl transcript IDs: ENSMUST00000075767.14, ENSMUST00000091497.11, ENSMUST00000115037.9, ENSMUST00000175669.8, ENSMUST00000175944.8, ENSMUST00000176803.8, ENSMUST00000176828.8, ENSMUST00000176864.3, ENSMUST00000177457.8, ENSMUST00000239018.2

Found 776 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCGTAGGCTGAAGCCCCTGCATAGGGCAGTCCTAATGGTACCCTaGTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: GRRLKPLHRAVLMVP*SSHVQTDRVRVCQA
Trigger: GGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTACCATTAGGACTGCCCTATGCAGGGGCTTCAGCCTACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 90 bp GGTGGTCACATCCAGCCTGGCCGGCTCACACGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGAT +
Preference number: 1 (lower is better)
Translates to: GGHIQPGRLTRGSRA*LFPARTIGHQLALD
Trigger: ATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGTGTGAGCCGGCCAGGCTGGATGTGACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR TCA 90 bp TTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTaGATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: LGSLARRRAASVIWD*IANSRSRRSSSASF
Trigger: GAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR CCA 90 bp GGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTaGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: GRRWCIEVTDTAGGV*ALWELSCCNSALPA
Trigger: GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 90 bp CTGGTGCAGGTGACAGTGCATCTGGGTAAGGCAAATGAGAGGCAGTaGGGTGACTTGGAATGGCGTGGCGGTGGTCACATCCAGCCTGGC +
Preference number: 1 (lower is better)
Translates to: LVQVTVHLGKANERQ*GDLEWRGGGHIQPG
Trigger: GCCAGGCTGGATGTGACCACCGCCACGCCATTCCAAGTCACCTCACTGCCTCTCATTTGCCTTACCCAGATGCACTGTCACCTGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 90 bp TGGGCTCATCACGCCAACCATGCCCAGCTCTGGGGTACCCAGCCTTaGATGGGAGAGAAAAGGCCTCAGGCCACATGGGATGAATGCTCC +
Preference number: 1 (lower is better)
Translates to: WAHHANHAQLWGTQP*MGEKRPQATWDECS
Trigger: GGAGCATTCATCCCATGTGGCCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTACCCCAGAGCTGGGCATGGTTGGCGTGATGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR GCA 90 bp ATGGTACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTaGCAGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGT +
Preference number: 1 (lower is better)
Translates to: MVPCSSHVQTDRVRV*QASRASFIFTVPLG
Trigger: ACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 90 bp TCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTaGGTTGTTGCAACTCTGCTCTGCCTGCCAACTGGTAGACGTGTG +
Preference number: 1 (lower is better)
Translates to: SRSQILLEGSGPFGS*VVATLLCLPTGRRV
Trigger: CACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp TGGGAAGAGTACTGCTTCTGGAAGCTGGGCTCATCACGCCAACCATaGCCAGCTCTGGGGTACCCAGCCTTGAATGGGAGAGAAAAGGCC +
Preference number: 1 (lower is better)
Translates to: WEEYCFWKLGSSRQP*PALGYPALNGREKA
Trigger: GGCCTTTTCTCTCCCATTCAAGGCTGGGTACCCCAGAGCTGGGCATGGTTGGCGTGATGAGCCCAGCTTCCAGAAGCAGTACTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CCA 90 bp TCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTaGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTT +
Preference number: 1 (lower is better)
Translates to: SPEHSPLEALGRPIG*QPETASVSAGRASF
Trigger: AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 90 bp CTCATCACGCCAACCATGCCCAGCTCTGGGGTACCCAGCCTTGAATaGGAGAGAAAAGGCCTCAGGCCACATGGGATGAATGCTCCCACT +
Preference number: 1 (lower is better)
Translates to: LITPTMPSSGVPSLE*ERKGLRPHGMNAPT
Trigger: AGTGGGAGCATTCATCCCATGTGGCCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTACCCCAGAGCTGGGCATGGTTGGCGTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR TCA 90 bp TTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTaGGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACAC +
Preference number: 1 (lower is better)
Translates to: LWPGYHGRRKPPRCH*GLLSGSLGKRARGH
Trigger: GTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp CCACTCACCCTACAGGGTTATCCCTCAAGTGTCTGGGAAGAGTACTaGTTCTGGAAGCTGGGCTCATCACGCCAACCATGCCCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: PLTLQGYPSSVWEEY*FWKLGSSRQPCPAL
Trigger: CAGAGCTGGGCATGGTTGGCGTGATGAGCCCAGCTTCCAGAAGCAGTACTCTTCCCAGACACTTGAGGGATAACCCTGTAGGGTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CCA 90 bp TCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTaGCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGA +
Preference number: 1 (lower is better)
Translates to: SWQTETTKVPLRIVV*LSGQESQGTHSGFG
Trigger: TCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 90 bp TGGTATCTGTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTaGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGC +
Preference number: 1 (lower is better)
Translates to: WYLWTEVVYRGHRYC*RGLGPLGAELLQLC
Trigger: GCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCACAGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp CTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTaGTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGATGGTTG +
Preference number: 1 (lower is better)
Translates to: LHLHCPVGFVPSSQE*SRRRVTTGRGLRWL
Trigger: CAACCATCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp GGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTaGCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCG +
Preference number: 1 (lower is better)
Translates to: GLGPLGAELLQLCSA*QLVDVCKKSSYLRA
Trigger: CGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp TGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTaGTCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTAC +
Preference number: 1 (lower is better)
Translates to: CWRGLGPLGAELLQL*SACQLVDVCKKSSY
Trigger: GTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 90 bp GATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTaGGTTCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTTGAG +
Preference number: 1 (lower is better)
Translates to: DCCLALWAREPGDTQ*VRNLPECLLSQVFE
Trigger: CTCAAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 90 bp GAATGCTCCCACTTGACTTCCAGAGGTTTCCAAGCCACTGCAAAGTaGGGGTCAGTCCTTTCTGCTGTTCATTTCTTACCTTCCCAGTCT +
Preference number: 1 (lower is better)
Translates to: ECSHLTSRGFQATAK*GSVLSAVHFLPSQS
Trigger: AGACTGGGAAGGTAAGAAATGAACAGCAGAAAGGACTGACCCTCACTTTGCAGTGGCTTGGAAACCTCTGGAAGTCAAGTGGGAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR GCA 90 bp ACCGTAGGTTGGCAGAGACTCCACGATACTCATGTAGTTCACGATTaGTTGTCCCCTCGTCTGGCCATTCAGCTTCTTGTAGTACTCAAT +
Preference number: 1 (lower is better)
Translates to: TVGWQRLHDTHVVHD*LSPRLAIQLLVVLN
Trigger: ATTGAGTACTACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAACCTACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR CCA 90 bp ACTCTTGTGCCATCGTTAGTGCCATGCCCCACTAAGACTGTGCACTaGTTAGTTAGTATAGAAGTGGTTCTGAGGCCTTTGGAGATTGAT +
Preference number: 1 (lower is better)
Translates to: TLVPSLVPCPTKTVH*LVSIEVVLRPLEID
Trigger: ATCAATCTCCAAAGGCCTCAGAACCACTTCTATACTAACTAACCAGTGCACAGTCTTAGTGGGGCATGGCACTAACGATGGCACAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp AATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTTaGTTTTCTTTCCCTTGGTGGTGGTTACTCTTAATTGTCAAATGT +
Preference number: 1 (lower is better)
Translates to: NRKLSFQAFQLSFLP*FSFPWWWLLLIVKC
Trigger: ACATTTGACAATTAAGAGTAACCACCACCAAGGGAAAGAAAAGCAAGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR GCA 90 bp CTTTCACTTGTGCTGCGTAGGAGCAGTTTAGAATTGAAATTTCGCTaGAGAAAAAGTGTGTTCCTCTTGGCCCCTCCTATCTGTTCATTG +
Preference number: 1 (lower is better)
Translates to: LSLVLRRSSLELKFR*RKSVFLLAPPICSL
Trigger: CAATGAACAGATAGGAGGGGCCAAGAGGAACACACTTTTTCTGCAGCGAAATTTCAATTCTAAACTGCTCCTACGCAGCACAAGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 90 bp CCAGACTATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTaGTCCCCAAATCTATTACATTTAGATTCTTTCTGCATCTCTCAT +
Preference number: 1 (lower is better)
Translates to: PDYRDGVHSSHSVSL*SPNLLHLDSFCISH
Trigger: ATGAGAGATGCAGAAAGAATCTAAATGTAATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGATAGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR GCA 90 bp TCCGTTTCCCTCTGCTCCCCAAATCTATTACATTTAGATTCTTTCTaGATCTCTCATAGATCCGAAGGACTTCAGAATCAATTTTCAAAC +
Preference number: 1 (lower is better)
Translates to: SVSLCSPNLLHLDSF*ISHRSEGLQNQFSN
Trigger: GTTTGAAAATTGATTCTGAAGTCCTTCGGATCTATGAGAGATGCAGAAAGAATCTAAATGTAATAGATTTGGGGAGCAGAGGGAAACGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp CGGTGGTCACATCCAGCCTGGCCGGCTCACACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: RWSHPAWPAHTRVPG*AFSCPYHWTSASSG
Trigger: TCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGTGTGAGCCGGCCAGGCTGGATGTGACCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGATAGAGTCCGAGTCTaGCAGGCCAGCCGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFDRVRV*QASRAS
Trigger: GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATC...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 2 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTGTTGTCTGGCTCTCTaGGCAAGAGAGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RPAYRVAARNSFSICRQGCCLAL*AREPGD
Trigger: GTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACA...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 90 bp TGCCAGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTaGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAG +
Preference number: 2 (lower is better)
Translates to: CQASRASFIFTVPLG*FPALRSAPGEGSRQ
Trigger: CTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGGCAGTGAGGTGACTTaGAATGGCGTGGCGGTGGTC +
Preference number: 2 (lower is better)
Translates to: RGLGPLGAELLQLCSACQGSEVT*NGVAVV
Trigger: GACCACCGCCACGCCATTCCAAGTCACCTCACTGCC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCCAGGGGACACACAGTaGGTTCGGAACCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GGVWALWELSCCNSALPAPGDTQ*VRNLPE
Trigger: TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAACGAAGCTGGTGCAGGTaGCAGTGCATCTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: RGLGPLGAELLQLCSACQRSWCR*QCIWVR
Trigger: CCTTACCCAGATGCACTGTCACCTGCACCAGCTTCG...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTTGGTCACATCCAGCCTaGCCGGCTCACACGAGGGTC +
Preference number: 2 (lower is better)
Translates to: RASFIFTVPLGLFPALRSWSHPA*PAHTRV
Trigger: GACCCTCGTGTGAGCCGGCCAGGCTGGATGTGACCA...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCGAAGCTGGTGCAGGTaGCAGTGCATCTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGRSWCR*QCIWVR
Trigger: CCTTACCCAGATGCACTGTCACCTGCACCAGCTTCG...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAACTGCTTTTGGCTATaGTCACCGTTGGCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: GGVWALWELSCCNSALPANCFWL*SPLASS
Trigger: GGAGGAAGCCAACGGTGACCATAGCCAAAAGCAGTT...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACCCCTTAGGAGCTCTTaGTGGCTGTCTCACTATGGC +
Preference number: 2 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQPLRSS*WLSHYG
Trigger: GCCATAGTGAGACAGCCAGCAAGAGCTCCTAAGGGG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGATCCTGCCCGTACCATTaGACATCAGCTAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRSCPYH*TSASSG
Trigger: TCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGA...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGGCAGTGAGGTGACTTaGAATGGCGTGGCGGTGGTC +
Preference number: 2 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKGSEVT*NGVAVV
Trigger: GACCACCGCCACGCCATTCCAAGTCACCTCACTGCC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACCAGGGGACACACAGTaGGTTCGGAACCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQPGDTQ*VRNLPE
Trigger: TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTTGTTGTCTGGCTCTCTaGGCAAGAGAGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: ASFIFTVPLGLFPALRSACCLAL*AREPGD
Trigger: GTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACA...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAAAAAGGAAGGAAGCTTTaGGGGCGTAGGCTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQKGRKL*GRRLKP
Trigger: GGGCTTCAGCCTACGCCCCCAAAGCTTCCTTCCTTT...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGACTGCTGGAGGGGTCTaGGCCCTTTGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKTAGGV*ALWELS
Trigger: ACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGT...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp TTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: FVAWVSWQTETTKVP*RIVVWLSGQESQGT
Trigger: TGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTaGTTGCAACTCTGCTCTGCCTGCCAACTGGTAGACGTGTGTAAA +
Preference number: 2 (lower is better)
Translates to: GHRYCWRGLGPLGAE*LQLCSACQLVDVCK
Trigger: TTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTCGAAGCTGGTGCAGGTaGCAGTGCATCTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGRSWCR*QCIWVR
Trigger: CCTTACCCAGATGCACTGTCACCTGCACCAGCTTCG...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTCGAAGCTGGTGCAGGTaGCAGTGCATCTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVRSWCR*QCIWVR
Trigger: CCTTACCCAGATGCACTGTCACCTGCACCAGCTTCG...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACCACCAAGGTGCCATTaGGGATTGTTGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQPPRCH*GLLSGS
Trigger: AGAGCCAGACAACAATCCTCAATGGCACCTTGGTGG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCACCCCTTAGGAGCTCTTaGTGGCTGTCTCACTATGGC +
Preference number: 2 (lower is better)
Translates to: TPASHTTSTETLVPSLVPPLRSS*WLSHYG
Trigger: GCCATAGTGAGACAGCCAGCAAGAGCTCCTAAGGGG...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGATAGAGTCCGAGTCTaGCAGGCCAGCCGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYDRVRV*QASRAS
Trigger: GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATC...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGGGCAGTGAGGTGACTTaGAATGGCGTGGCGGTGGTC +
Preference number: 2 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALGSEVT*NGVAVV
Trigger: GACCACCGCCACGCCATTCCAAGTCACCTCACTGCC...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTCCAGGGGACACACAGTaGGTTCGGAACCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RASFIFTVPLGLFPALRSPGDTQ*VRNLPE
Trigger: TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGG...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGTGTTGTCTGGCTCTCTaGGCAAGAGAGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: TVCGLGIMADGNHQGAIECCLAL*AREPGD
Trigger: GTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACA...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAGGTCACAGATACTGCTaGAGGGGTCTGGGCCCTTTG +
Preference number: 2 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGGHRYC*RGLGPL
Trigger: CAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp CACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTaGCAACTCTGCTCTGCCTGCCAACTGGTAGACGTGTGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: HRYCWRGLGPLGAEL*QLCSACQLVDVCKK
Trigger: CTTTTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 2 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCCTGGCTGTCTCACTATaGCAGATTTATTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: YPAPPMSRQIESESARPALAVSL*QIYFRC
Trigger: ACACCTGAAATAAATCTGCCATAGTGAGACAGCCAG...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAAAAGTGTGTTCCTCTTaGCCCCTCCTATCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: RGLGPLGAELLQLCSACQKVCSS*PLLSVH
Trigger: ATGAACAGATAGGAGGGGCCAAGAGGAACACACTTT...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCTATCTGTTCATTGTTaGATGTGTCTAATCTTTGGC +
Preference number: 2 (lower is better)
Translates to: GGVWALWELSCCNSALPALSVHC*MCLIFG
Trigger: GCCAAAGATTAGACACATTCAACAATGAACAGATAG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTGGCAGTGAGGTGACTTaGAATGGCGTGGCGGTGGTC +
Preference number: 2 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTGSEVT*NGVAVV
Trigger: GACCACCGCCACGCCATTCCAAGTCACCTCACTGCC...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAACTGGCTGTCTCACTATaGCAGATTTATTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: RGLGPLGAELLQLCSACQLAVSL*QIYFRC
Trigger: ACACCTGAAATAAATCTGCCATAGTGAGACAGCCAG...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAACTGCTTTTGGCTATaGTCACCGTTGGCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGNCFWL*SPLASS
Trigger: GGAGGAAGCCAACGGTGACCATAGCCAAAAGCAGTT...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTAACTGCTTTTGGCTATaGTCACCGTTGGCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPNCFWL*SPLASS
Trigger: GGAGGAAGCCAACGGTGACCATAGCCAAAAGCAGTT...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTTCCTCTTGGTATCTGTaGACGGAGGTGGTGTATCGA +
Preference number: 2 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPSSWYL*TEVVYR
Trigger: TCGATACACCACCTCCGTCCACAGATACCAAGAGGA...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TTGCTGACATTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTTTTCTTTCCCTTGGTaGTGGTTACTCTTAATTGTC +
Preference number: 2 (lower is better)
Translates to: LLTLGSLARRRAASVIWDFSFPW*WLLLIV
Trigger: GACAATTAAGAGTAACCACCACCAAGGGAAAGAAAA...GTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAATGTCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR-3UTR CCA 90 bp ATACTGGAAAATTCCTTTGTAGCTCAGTCCCAGCCACCATGGTATCCCCTGCTTCCTTCAGGGCTTGGGTaGGTAGCGCTGGCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: ILENSFVAQSQPPWYPLLPSGLG*VALAAF
Trigger: AAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGG...AAGCAGGGGATACCATGGTGGCTGGGACTGAGCTACAAAGGAATTTTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR-3UTR TCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATCAAGCCACTGCAAAGTaGGGGTCAGTCCTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYQATAK*GSVLSA
Trigger: AGCAGAAAGGACTGACCCTCACTTTGCAGTGGCTTG...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGGGCTTGGCTTTTTCCTaGCCGTACCATTGGACATCA +
Preference number: 2 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALGLAFS*PYHWTS
Trigger: TGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCC...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTGGCTGTCTCACTATaGCAGATTTATTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGLAVSL*QIYFRC
Trigger: ACACCTGAAATAAATCTGCCATAGTGAGACAGCCAG...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATGTACCCAGCCTTGAATaGGAGAGAAAAGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYVPSLE*ERKGLR
Trigger: CCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTAC...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp CACCGTAGGTTGGCAGAGACTCCACGATACTCATGTAGTTCACGATaGCTTGTCCCCTCGTCTGGCCATTCAGCTTCTTGTAGTACTCAA +
Preference number: 2 (lower is better)
Translates to: HRRLAETPRYSCSSR*LVPSSGHSASCSTQ
Trigger: TTGAGTACTACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAACCTACGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR-3UTR TCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTCCACCAAGGTGCCATTaGGGATTGTTGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSPPRCH*GLLSGS
Trigger: AGAGCCAGACAACAATCCTCAATGGCACCTTGGTGG...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGTTTCCTGACAGTTTGTaGCCTGGGTATCATGGCAGA +
Preference number: 2 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALFPDSL*PGYHGR
Trigger: TCTGCCATGATACCCAGGCCACAAACTGTCAGGAAA...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CCTAGAGCGTTCATCACCAACCACAGCGACCATTTATTATGTCAGTCTCAAAGGAAAGGAAGGAAGCTTTaGGGGCGTAGGCTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: PRAFITNHSDHLLCQSQRKGRKL*GRRLKP
Trigger: GGGCTTCAGCCTACGCCCCCAAAGCTTCCTTCCTTT...CCTTTGAGACTGACATAATAAATGGTCGCTGTGGTTGGTGATGAACGCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CCTAGAGCGTTCATCACCAACCACAGCGACCATTTATTATGTCAGTCTCAAAGGGCTTTCTTCCCACCCTaGCTCCTGGTCCTAGATGTC +
Preference number: 2 (lower is better)
Translates to: PRAFITNHSDHLLCQSQRAFFPP*LLVLDV
Trigger: GACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC...CCTTTGAGACTGACATAATAAATGGTCGCTGTGGTTGGTGATGAACGCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp TTGTTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTaGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: LFSSTGIACVGFPDS*WPGYHGRRKPPRCH
Trigger: ATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 90 bp GTAGGTTGGCAGAGACTCCACGATACTCATGTAGTTCACGATTGCTaGTCCCCTCGTCTGGCCATTCAGCTTCTTGTAGTACTCAATGAC +
Preference number: 2 (lower is better)
Translates to: VGWQRLHDTHVVHDC*SPRLAIQLLVVLND
Trigger: GTCATTGAGTACTACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR-3UTR TCA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCTATCTGTTCATTGTTaGATGTGTCTAATCTTTGGC +
Preference number: 2 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGLSVHC*MCLIFG
Trigger: GCCAAAGATTAGACACATTCAACAATGAACAGATAG...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTGTTGTCTGGCTCTCTaGGCAAGAGAGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGCCLAL*AREPGD
Trigger: GTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCTATCTGTTCATTGTTaGATGTGTCTAATCTTTGGC +
Preference number: 2 (lower is better)
Translates to: ASFIFTVPLGLFPALRSALSVHC*MCLIFG
Trigger: GCCAAAGATTAGACACATTCAACAATGAACAGATAG...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATGATAGAGTCCGAGTCTaGCAGGCCAGCCGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNDRVRV*QASRAS
Trigger: GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATC...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTTGCTTTTCTTTCCCTTaGTGGTGGTTACTCTTAATT +
Preference number: 2 (lower is better)
Translates to: LGLNRKLSFQAFQLSFLPCFSFP*WWLLLI
Trigger: AATTAAGAGTAACCACCACCAAGGGAAAGAAAAGCA...AGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTCCTGCCCGTACCATTaGACATCAGCTAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGSCPYH*TSASSG
Trigger: TCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTGGTCACAGATACTGCTaGAGGGGTCTGGGCCCTTTG +
Preference number: 2 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGGHRYC*RGLGPL
Trigger: CAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp ATGGTAGTCATACTGGAAAATTCCTTTGTAGCTCAGTCCCAGCCACCATGGTATGTGAACACCGTAGGTTaGCAGAGACTCCACGATACT +
Preference number: 2 (lower is better)
Translates to: MVVILENSFVAQSQPPWYVNTVG*QRLHDT
Trigger: AGTATCGTGGAGTCTCTGCCAACCTACGGTGTTCAC...ATACCATGGTGGCTGGGACTGAGCTACAAAGGAATTTTCCAGTATGACTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR-3UTR TCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGAGAAGAAAAGTGCTaGGGGCCGAAGCTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: KQAISYMYPTNPIGALNWGEEKC*GPKLVQ
Trigger: CTGCACCAGCTTCGGCCCTCAGCACTTTTCTTCTCC...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp AGTGAACACCGTAGGTTGGCAGAGACTCCACGATACTCATGTAGTTCACGATTGTCTTGTAGTACTCAATaGCTCTGTCTTCACAGTAGG +
Preference number: 2 (lower is better)
Translates to: SEHRRLAETPRYSCSSRLSCSTQ*LCLHSR
Trigger: CCTACTGTGAAGACAGAGTCATTGAGTACTACAAGA...CAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAACCTACGGTGTTCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR-3UTR CCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGGAAGAGTACTGCTTCTaGAAGCTGGGCTCATCACGC +
Preference number: 2 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGEEYCF*KLGSSR
Trigger: GCGTGATGAGCCCAGCTTCCAGAAGCAGTACTCTTC...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp CGCTGCAGAAAAAGTGTGTTCCTCTTGGCCCCTCCTATCTGTTCATaGTTGAATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGAT +
Preference number: 2 (lower is better)
Translates to: RCRKSVFLLAPPICS*LNVSNLWQHRTNCD
Trigger: ATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATTCAACAATGAACAGATAGGAGGGGCCAAGAGGAACACACTTTTTCTGCAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTCCCCTTAGGAGCTCTTaGTGGCTGTCTCACTATGGC +
Preference number: 2 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLPLRSS*WLSHYG
Trigger: GCCATAGTGAGACAGCCAGCAAGAGCTCCTAAGGGG...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAAAAGGAAGGAAGCTTTaGGGGCGTAGGCTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPKGRKL*GRRLKP
Trigger: GGGCTTCAGCCTACGCCCCCAAAGCTTCCTTCCTTT...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTGGTCACAGATACTGCTaGAGGGGTCTGGGCCCTTTG +
Preference number: 2 (lower is better)
Translates to: LFISYLPSLVMSIVILGFGHRYC*RGLGPL
Trigger: CAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp TGCAGAAAAAGTGTGTTCCTCTTGGCCCCTCCTATCTGTTCATTGTaGAATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCT +
Preference number: 2 (lower is better)
Translates to: CRKSVFLLAPPICSL*NVSNLWQHRTNCDP
Trigger: AGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATTCAACAATGAACAGATAGGAGGGGCCAAGAGGAACACACTTTTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCACCACCAAGGTGCCATTaGGGATTGTTGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPPPRCH*GLLSGS
Trigger: AGAGCCAGACAACAATCCTCAATGGCACCTTGGTGG...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATTCAGGCCACATGGGATaGATGCTCCCACTTGACTTC +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNSGHMG*MLPLDF
Trigger: GAAGTCAAGTGGGAGCATTCATCCCATGTGGCCTGA...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTGGCTTGGCTTTTTCCTaGCCGTACCATTGGACATCA +
Preference number: 2 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGGLAFS*PYHWTS
Trigger: TGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCC...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATGTACCCAGCCTTGAATaGGAGAGAAAAGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNVPSLE*ERKGLR
Trigger: CCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTAC...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGTACCCAGCCTTGAATaGGAGAGAAAAGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: KQAISYMYPTNPIGALNWVPSLE*ERKGLR
Trigger: CCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTAC...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATGAAGAGTACTGCTTCTaGAAGCTGGGCTCATCACGC +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNEEYCF*KLGSSR
Trigger: GCGTGATGAGCCCAGCTTCCAGAAGCAGTACTCTTC...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGAGGTTTCCAAGCCACTaGAAAGTGAGGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: KQAISYMYPTNPIGALNWRFPSH*KVRVSP
Trigger: AGGACTGACCCTCACTTTGCAGTGGCTTGGAAACCT...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTTTTCCTGACAGTTTGTaGCCTGGGTATCATGGCAGA +
Preference number: 2 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPFPDSL*PGYHGR
Trigger: TCTGCCATGATACCCAGGCCACAAACTGTCAGGAAA...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTAATCTCTGTCCTTACTaGCAGACTATCGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPNLCPY*QTIVMV
Trigger: CACCATCACGATAGTCTGGCAGTAAGGACAGAGATT...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR TCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTGAGGCCTTTGGAGATTaGTGGCTTTTTGGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: LFISYLPSLVMSIVILGFEAFGD*WLFGCV
Trigger: CACACAACCAAAAAGCCATCAATCTCCAAAGGCCTC...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGAAAGTGTGTTCCTCTTaGCCCCTCCTATCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: KQAISYMYPTNPIGALNWKVCSS*PLLSVH
Trigger: ATGAACAGATAGGAGGGGCCAAGAGGAACACACTTT...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAAAGTGTGTTCCTCTTaGCCCCTCCTATCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNKVCSS*PLLSVH
Trigger: ATGAACAGATAGGAGGGGCCAAGAGGAACACACTTT...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATGGACGTGGTCTAAGATaGTTGACTTTCACTTGTGCT +
Preference number: 2 (lower is better)
Translates to: HSLLAETSNFLHVSNESNGRGLR*LTFTCA
Trigger: AGCACAAGTGAAAGTCAACCATCTTAGACCACGTCC...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGACGTGGTCTAAGATaGTTGACTTTCACTTGTGCT +
Preference number: 2 (lower is better)
Translates to: KQAISYMYPTNPIGALNWGRGLR*LTFTCA
Trigger: AGCACAAGTGAAAGTCAACCATCTTAGACCACGTCC...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 90 bp GCTGTCTCTGTTATAACCTGTAACCATGTAACCTTGTCTTGTTCTTaGTTTCCTTTTGGACGTTTTCTGTTCAGGCAAATTATTCAGGCA +
Preference number: 2 (lower is better)
Translates to: AVSVITCNHVTLSCS*FPFGRFLFRQIIQA
Trigger: TGCCTGAATAATTTGCCTGAACAGAAAACGTCCAAAAGGAAACAAAGAACAAGACAAGGTTACATGGTTACAGGTTATAACAGAGACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTTGTAAACAAGCAGCTTaGACGCGTGCTTTTATGTTT +
Preference number: 2 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGCKQAA*TRAFMF
Trigger: AAACATAAAAGCACGCGTGCAAGCTGCTTGTTTACA...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 3 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFTRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR TCA 72 bp CTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTaGATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: LARRRAASVIWD*IANSRSRRSSS
Trigger: TGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR TCA 72 bp CATTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTaGTCTGGGACTGAATCGCAAACTCTCGTTCCAGGC +
Preference number: 3 (lower is better)
Translates to: HWGHWLDGGRPL*SGTESQTLVPG
Trigger: GCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR-3UTR CAA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 3 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSTRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR GCA 72 bp CTGTGGACGGAGGTGGTGTATCGAGGTCACAGATACTaGTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTG +
Preference number: 3 (lower is better)
Translates to: LWTEVVYRGHRY*WRGLGPLGAEL
Trigger: CAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTaGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: RPAEPPSSSLSR*VCSQLSGVLQE
Trigger: CTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GGVWALWELSCCNSALPATTKVP*RIVVWL
Trigger: GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGT...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp CAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTaGGTTGTTGCAACTCTGCTCTGCCTGCCAACTGGT +
Preference number: 3 (lower is better)
Translates to: QILLEGSGPFGS*VVATLLCLPTG
Trigger: ACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp TGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTaGCAGGCCAGCCGAGCCTCCTTCATCTTCACTGTC +
Preference number: 3 (lower is better)
Translates to: CSSHVQTDRVRV*QASRASFIFTV
Trigger: GACAGTGAAGATGAAGGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp ATCTGGGTAAGGCAAATGAGAGGCAGTGAGGTGACTTaGAATGGCGTGGCGGTGGTCACATCCAGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: IWVRQMRGSEVT*NGVAVVTSSLA
Trigger: GGCCAGGCTGGATGTGACCACCGCCACGCCATTCCAAGTCACCTCACTGCCTCTCATTTGCCTTACCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp CTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTaGGTTCGGAACCTTCCAGAATGTCTCCTCAGTCAG +
Preference number: 3 (lower is better)
Translates to: LALWAREPGDTQ*VRNLPECLLSQ
Trigger: CTGACTGAGGAGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp TGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTaGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: WTEVVYRGHRYC*RGLGPLGAELL
Trigger: CAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLTTKVP*RIVVWL
Trigger: GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGT...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTATCTTCACTGTCCCGTaGGGTTTGTTCCCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFIFTVP*GLFPAL
Trigger: GAGAGCTGGGAACAAACCCAACGGGACAGTGAAGAT...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCAAGGGGTCTGGGCCCTTaGGGAGCTGAGTTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: TPASHTTSTETLVPSLVPRGLGP*GAELLQ
Trigger: TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp CTGAAGCCCCTGCATAGGGCAGTCCTAATGGTACCCTaGTCCTCCCATGTCCAGACAGATAGAGTCCGAGTC +
Preference number: 3 (lower is better)
Translates to: LKPLHRAVLMVP*SSHVQTDRVRV
Trigger: GACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTACCATTAGGACTGCCCTATGCAGGGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp CCAACCATGCCCAGCTCTGGGGTACCCAGCCTTGAATaGGAGAGAAAAGGCCTCAGGCCACATGGGATGAAT +
Preference number: 3 (lower is better)
Translates to: PTMPSSGVPSLE*ERKGLRPHGMN
Trigger: ATTCATCCCATGTGGCCTGAGGCCTTTTCTCTCCCATTCAAGGCTGGGTACCCCAGAGCTGGGCATGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATCCTCAGTCAGGTTTTaGAGGGTGAAAGGGATGTGG +
Preference number: 3 (lower is better)
Translates to: RGLGPLGAELLQLCSACQSSVRF*RVKGMW
Trigger: CCACATCCCTTTCACCCTCAAAAACCTGACTGAGGA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATTTGGGAGCTGAGTTGTaGCAACTCTGCTCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHLGAEL*QLCSAC
Trigger: GCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAA...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTAGGGGTCTGGGCCCTTaGGGAGCTGAGTTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPRGLGP*GAELLQ
Trigger: TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp GGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTaGGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: GYHGRRKPPRCH*GLLSGSLGKRA
Trigger: GGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp GCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATaGCAAGGTAACCCCTGCAAGCCACACTACCTCCAC +
Preference number: 3 (lower is better)
Translates to: APGPRCLPHRKS*QGNPCKPHYLH
Trigger: GTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp ACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTaGCTCTCTGGGCAAGAGAGCCAGGGGACACACAGT +
Preference number: 3 (lower is better)
Translates to: TETTKVPLRIVV*LSGQESQGTHS
Trigger: ACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTTCCTCAGTCAGGTTTTaGAGGGTGAAAGGGATGTGG +
Preference number: 3 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGSSVRF*RVKGMW
Trigger: CCACATCCCTTTCACCCTCAAAAACCTGACTGAGGA...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHTTKVP*RIVVWL
Trigger: GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGT...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAAAAAGTGTGTTCCTCTaGGCCCCTCCTATCTGTTCA +
Preference number: 3 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRKSVFL*APPICS
Trigger: TGAACAGATAGGAGGGGCCAAGAGGAACACACTTTT...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp GAGAAGAAAAGTGCTGAGGGCCGAAGCTGGTGCAGGTaGCAGTGCATCTGGGTAAGGCAAATGAGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: EKKSAEGRSWCR*QCIWVRQMRGS
Trigger: ACTGCCTCTCATTTGCCTTACCCAGATGCACTGTCACCTGCACCAGCTTCGGCCCTCAGCACTTTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp GGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTaGTCTGCCTGCCAACTGGTAGACGTGTGTAAAAAG +
Preference number: 3 (lower is better)
Translates to: GLGPLGAELLQL*SACQLVDVCKK
Trigger: CTTTTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp CTACAGGGTTATCCCTCAAGTGTCTGGGAAGAGTACTaGTTCTGGAAGCTGGGCTCATCACGCCAACCATGC +
Preference number: 3 (lower is better)
Translates to: LQGYPSSVWEEY*FWKLGSSRQPC
Trigger: GCATGGTTGGCGTGATGAGCCCAGCTTCCAGAAGCAGTACTCTTCCCAGACACTTGAGGGATAACCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTTCTCTTCTACAGGAATaGCATGTGTTGGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFSLLQE*HVLAFL
Trigger: CAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGA...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TTGCTGACATTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTTGCTTTTCTTTCCCTaGGTGGTGGTTACTCTTAAT +
Preference number: 3 (lower is better)
Translates to: LLTLGSLARRRAASVIWDLLFFP*VVVTLN
Trigger: ATTAAGAGTAACCACCACCAAGGGAAAGAAAAGCAA...GTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAATGTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
3UTR TCA 72 bp AAAGGCCTCAGGCCACATGGGATGAATGCTCCCACTTaGCTTCCAGAGGTTTCCAAGCCACTGCAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: KGLRPHGMNAPT*LPEVSKPLQSE
Trigger: CTCACTTTGCAGTGGCTTGGAAACCTCTGGAAGTCAAGTGGGAGCATTCATCCCATGTGGCCTGAGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR GCA 72 bp ATGGGAGAGAAAAGGCCTCAGGCCACATGGGATGAATaGTCCCACTTGACTTCCAGAGGTTTCCAAGCCACT +
Preference number: 3 (lower is better)
Translates to: MGEKRPQATWDE*SHLTSRGFQAT
Trigger: AGTGGCTTGGAAACCTCTGGAAGTCAAGTGGGAGCATTCATCCCATGTGGCCTGAGGCCTTTTCTCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CCA 72 bp TCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTaGTCTAAGATGGTTGACTTTCACTTGTGCTGCGTA +
Preference number: 3 (lower is better)
Translates to: SGVLQEKGHDRT*SKMVDFHLCCV
Trigger: TACGCAGCACAAGTGAAAGTCAACCATCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGTCCTCAGTCAGGTTTTaGAGGGTGAAAGGGATGTGG +
Preference number: 3 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALSSVRF*RVKGMW
Trigger: CCACATCCCTTTCACCCTCAAAAACCTGACTGAGGA...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTAAAAGTGTGTTCCTCTaGGCCCCTCCTATCTGTTCA +
Preference number: 3 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPKSVFL*APPICS
Trigger: TGAACAGATAGGAGGGGCCAAGAGGAACACACTTTT...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAAGGAGCAGTTTAGAATaGAAATTTCGCTGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRRSSLE*KFRCRK
Trigger: TTTTCTGCAGCGAAATTTCAATTCTAAACTGCTCCT...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp CCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTaGCAACTGGTAGACGTGTGTAAAAAGTCTTCCTAC +
Preference number: 3 (lower is better)
Translates to: PLGAELLQLCSA*QLVDVCKKSSY
Trigger: GTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp TGGCAGAGACTCCACGATACTCATGTAGTTCACGATTaGTTGTCCCCTCGTCTGGCCATTCAGCTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: WQRLHDTHVVHD*LSPRLAIQLLV
Trigger: TACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
3UTR GCA 72 bp CCAGTCTTCTTTCTCACACGTCCCCTTAGGAGCTCTTaGTGGCTGTCTCACTATGGCAGATTTATTTCAGGT +
Preference number: 3 (lower is better)
Translates to: PVFFLTRPLRSS*WLSHYGRFISG
Trigger: ACCTGAAATAAATCTGCCATAGTGAGACAGCCAGCAAGAGCTCCTAAGGGGACGTGTGAGAAAGAAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR GCA 72 bp ATGCTCCCACTTGACTTCCAGAGGTTTCCAAGCCACTaGAAAGTGAGGGTCAGTCCTTTCTGCTGTTCATTT +
Preference number: 3 (lower is better)
Translates to: MLPLDFQRFPSH*KVRVSPFCCSF
Trigger: AAATGAACAGCAGAAAGGACTGACCCTCACTTTGCAGTGGCTTGGAAACCTCTGGAAGTCAAGTGGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTTGATGGCTTTTTGGTaGTGTGTTAAGCATAGCTCA +
Preference number: 3 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKLMAFW*CVKHSS
Trigger: TGAGCTATGCTTAACACACAACCAAAAAGCCATCAA...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGCTGGGGTACCCAGCCTaGAATGGGAGAGAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGLGYPA*NGREKA
Trigger: GGCCTTTTCTCTCCCATTCAAGGCTGGGTACCCCAG...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTATCTTCACTGTCCCGTaGGGTTTGTTCCCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGIFTVP*GLFPAL
Trigger: GAGAGCTGGGAACAAACCCAACGGGACAGTGAAGAT...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp CACTTGACTTCCAGAGGTTTCCAAGCCACTGCAAAGTaGGGGTCAGTCCTTTCTGCTGTTCATTTCTTACCT +
Preference number: 3 (lower is better)
Translates to: HLTSRGFQATAK*GSVLSAVHFLP
Trigger: AGGTAAGAAATGAACAGCAGAAAGGACTGACCCTCACTTTGCAGTGGCTTGGAAACCTCTGGAAGTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CCA 72 bp GTCTTCTTTCTCACACGTCCCCTTAGGAGCTCTTGCTaGCTGTCTCACTATGGCAGATTTATTTCAGGTGTA +
Preference number: 3 (lower is better)
Translates to: VFFLTRPLRSSC*LSHYGRFISGV
Trigger: TACACCTGAAATAAATCTGCCATAGTGAGACAGCCAGCAAGAGCTCCTAAGGGGACGTGTGAGAAAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGCCTATCTGTTCATTGTaGAATGTGTCTAATCTTTGG +
Preference number: 3 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALPICSL*NVSNLW
Trigger: CCAAAGATTAGACACATTCAACAATGAACAGATAGG...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR TCA 72 bp CTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTaGTGCGTCTCTGAAGCACCAGTCTTCTTTCTCACA +
Preference number: 3 (lower is better)
Translates to: LIFGSIEPTVIL*CVSEAPVFFLT
Trigger: TGTGAGAAAGAAGACTGGTGCTTCAGAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCACCTTTGGGAGCTGAGTaGTTGCAACTCTGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPPLGAE*LQLCSA
Trigger: GGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGG...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: HSLLAETSNFLHVSNESNTTKVP*RIVVWL
Trigger: GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGT...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGTTGCCTTTTATCCTCTaGGTATCTGTGGACGGAGGT +
Preference number: 3 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGLPFIL*VSVDGG
Trigger: ACCTCCGTCCACAGATACCAAGAGGATAAAAGGCAA...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CCA 72 bp CCTCCTATCTGTTCATTGTTGAATGTGTCTAATCTTTaGCAGCATAGAACCAACTGTGATCCTCTGATGCGT +
Preference number: 3 (lower is better)
Translates to: PPICSLLNVSNL*QHRTNCDPLMR
Trigger: ACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATTCAACAATGAACAGATAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CCA 72 bp AAAGAAACAGGGATGTGTAAAGAATCTGCAGGTGCTTaGATACAATACCTAGAGCGTTCATCACCAACCACA +
Preference number: 3 (lower is better)
Translates to: KETGMCKESAGA*IQYLERSSPTT
Trigger: TGTGGTTGGTGATGAACGCTCTAGGTATTGTATCCAAGCACCTGCAGATTCTTTACACATCCCTGTTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTAGGAGCAGTTTAGAATaGAAATTTCGCTGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTRSSLE*KFRCRK
Trigger: TTTTCTGCAGCGAAATTTCAATTCTAAACTGCTCCT...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTTCTCTTCTACAGGAATaGCATGTGTTGGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: FKLGTSSPLKETGMCKESSLLQE*HVLAFL
Trigger: CAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGA...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATGTTCTTTGTTTCCTTTaGGACGTTTTCTGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: HSLLAETSNFLHVSNESNVLCFL*DVFCSG
Trigger: GCCTGAACAGAAAACGTCCAAAAGGAAACAAAGAAC...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTCCTATCTGTTCATTGTaGAATGTGTCTAATCTTTGG +
Preference number: 3 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPPICSL*NVSNLW
Trigger: CCAAAGATTAGACACATTCAACAATGAACAGATAGG...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR-3UTR CAA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAACCTTGTCTTGTTCTTaGTTTCCTTTTGGACGTTTT +
Preference number: 3 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPTLSCS*FPFGRF
Trigger: AAAACGTCCAAAAGGAAACAAAGAACAAGACAAGGT...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCGCTGCCAGAGCTGGCTaGGCCCAGGGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGAARAG*AQGACC
Trigger: GCAGCAGGCGCCCTGGGCTCAGCCAGCTCTGGCAGC...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCGCTGCCAGAGCTGGCTaGGCCCAGGGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLAARAG*AQGACC
Trigger: GCAGCAGGCGCCCTGGGCTCAGCCAGCTCTGGCAGC...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCACACGCCACCTCCAGTaGTTGCAGCCCCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPTRHLQ*LQPRCG
Trigger: CCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGT...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCTGCGGGCCGCCAGGTTaGGCATGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVWALWELSCCNSALPACGPPG*ACCQSW
Trigger: CCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCA...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTGCGCCTGCTGCCCGCTaGCTCTGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSAPAAR*LCRCRC
Trigger: GCAGCGACAGCGGCAGAGGCAGCGGGCAGCAGGCGC...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCGGCGGGCGGCCTCTGTaGTCTGGGACTGAATCGCAA +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASGGRPL*SGTESQ
Trigger: TTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCC...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTTGCTTGCAGCCCCGCTaGGGGCCGCCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGCLQPR*GPPGWA
Trigger: TGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCA...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCGGATGTGGTGGGGGCTaGTTGGTGGGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GGVWALWELSCCNSALPAGCGGG*LVGWLQ
Trigger: TTGGAGCCACCCCACCAAGCAGCCCCCACCACATCC...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCAGCGCTTGTGGCTGCTaGAATGGCCGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASSACGC*NGRGRS
Trigger: GCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCT...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGEAVER*YHWRSS
Trigger: TGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTC...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTGCCAGGTCAGGATGTaGTGGGGGCTGCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPCQVRM*WGLLGG
Trigger: CCCACCAAGCAGCCCCCACCACATCCTGACCTGGCA...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCGATAGTGCAGCTGCCTaGGTCCCTCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASDSAAA*VPPGTV
Trigger: CACAGTCCCTGGAGGGACTCAGGCAGCTGCACTATC...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGCTGCCAGAGCTGGCTaGGCCCAGGGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVAARAG*AQGACC
Trigger: GCAGCAGGCGCCCTGGGCTCAGCCAGCTCTGGCAGC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGVWALWELSCCNSALPARYSFL*WGSACG
Trigger: GCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGRYSFL*WGSACG
Trigger: GCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCG...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTGCGCCTGCTGCCCGCTaGCTCTGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPAPAAR*LCRCRC
Trigger: GCAGCGACAGCGGCAGAGGCAGCGGGCAGCAGGCGC...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCCCAGGTTGGGCATGCTaGCAGAGCTGGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAPGWAC*QSWLSP
Trigger: TGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGG...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAACCGCCAGGTTGGGCATaGTGCCAGAGCTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPEPPGWA*CQSWLS
Trigger: GCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGG...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTCCGCCAGGTTGGGCATaGTGCCAGAGCTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFPPGWA*CQSWLS
Trigger: GCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGG...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGGATGTGGTGGGGGCTaGTTGGTGGGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAGCGGG*LVGWLQ
Trigger: TTGGAGCCACCCCACCAAGCAGCCCCCACCACATCC...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCCTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGLSSSG*CRTSSR
Trigger: ACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAG...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: GGVWALWELSCCNSALPAPYARL*SAGTTG
Trigger: GCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 72 bp CATCCAGCCTGGCCGGCTCACACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTACCATTGGACATCAGCT +
Preference number: 4 (lower is better)
Translates to: HPAWPAHTRVPG*AFSCPYHWTSA
Trigger: AGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGTGTGAGCCGGCCAGGCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGGCGGGCGGCCTCTGTaGTCTGGGACTGAATCGCAA +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQGGRPL*SGTESQ
Trigger: TTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCGTCGTCCATGGGGTCTaGGCCATTGCTGCTACGAGT +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASVVHGV*AIAATS
Trigger: ACTCGTAGCAGCAATGGCTCAGACCCCATGGACGAC...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPASLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGA...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAACGCGCCAGCTCTCTTTaGACAGGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPERASSL*TGRQLC
Trigger: ACACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCG...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCGCGCCAGCTCTCTTTaGACAGGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWERASSL*TGRQLC
Trigger: ACACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCG...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAATCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTGCAGTGCAAGGCTGTaGAGTCTCGTGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGCSARL*SLVGLM
Trigger: CATCAGCCCCACGAGACTGCACAGCCTTGCACTGCA...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTTGCTTGCAGCCCCGCTaGGGGCCGCCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGCLQPR*GPPGWA
Trigger: TGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCA...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTTGCTTGCAGCCCCGCTaGGGGCCGCCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVCLQPR*GPPGWA
Trigger: TGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCA...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGTGCTTGCAGCCCCGCTaGGGGCCGCCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIECLQPR*GPPGWA
Trigger: TGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCA...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGGGATGTGGTGGGGGCTaGTTGGTGGGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWEGCGGG*LVGWLQ
Trigger: TTGGAGCCACCCCACCAAGCAGCCCCCACCACATCC...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGACCGGACGCGCAGGTCTaGGGTGGATGGCATGCTAGA +
Preference number: 4 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRPDAQV*GGWHAR
Trigger: TCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGG...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSSQECSRRRVTTGRGLREAVER*YHWRSS
Trigger: TGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTC...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCTCAAGGAGATGTACTTaGCATCGACGGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASSRRCT*HRRPSV
Trigger: GACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGA...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAGATAGTGCAGCTGCCTaGGTCCCTCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRDSAAA*VPPGTV
Trigger: CACAGTCCCTGGAGGGACTCAGGCAGCTGCACTATC...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQGGAGV*QTAVLL
Trigger: AAGGAGCACAGCCGTCTGTCACACACCAGCTCCACC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLSSSGW*RTSSRP
Trigger: TGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCT...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGCACTCGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: STRPAYRVAARNSFSICRSSSGW*RTSSRP
Trigger: TGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCT...CCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCACACGCCACCTCCAGTaGTTGCAGCCCCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESTRHLQ*LQPRCG
Trigger: CCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGT...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAACACGCCACCTCCAGTaGTTGCAGCCCCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARTRHLQ*LQPRCG
Trigger: CCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGT...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTGGCTGGCTCTGGCTGTaGAGGTACACGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGGWLWL*RYTPPP
Trigger: TGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCC...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGGTCGCTCTCCAGGCTaGGTACCACCACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSGRSPG*VPPRVW
Trigger: CCACACCCGTGGTGGTACGCAGCCTGGAGAGCGACC...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQRLCSL*EAVERW
Trigger: CCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCCCGGCCCAGACTTTTTaGGGAAGTCATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGPAQTF*GSHAPG
Trigger: TCCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGG...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCCCTTCAGGGCTTGGGTaGGTAGCGCTGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAPSGLG*VALAAF
Trigger: AAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGG...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTGCTGACATTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCAC +
Preference number: 4 (lower is better)
Translates to: LLTLGSLARRRAASVIWDRWFLA*IQGIFH
Trigger: GTGGAATATCCCCTGGATCCAGGCGAGGAACCACCT...GTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAATGTCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGTGCTCTGAGCTCGAGTaGCTGGTGCAGGACGAGCAG +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQCSELE*LVQDEQ
Trigger: CTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCA...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTTGCGGGCCGCCAGGTTaGGCATGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVCGPPG*ACCQSW
Trigger: CCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCA...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATGCGGGCCGCCAGGTTaGGCATGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPCGPPG*ACCQSW
Trigger: CCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCA...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTGAGCTGGGCTGGCTCTaGCTGTGCAGGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGELGWL*LCRYTP
Trigger: TGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGCTC...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATGCGGTACTGAGAGCTaGGCTGGCTCTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQCGTES*AGSGCA
Trigger: TGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAACCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQPYARL*SAGTTG
Trigger: GCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGG...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCCGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLRCPRR*SWCVTD
Trigger: GTCTGTCACACACCAGCTCCACCTCCTCGGACAGCG...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGCACTCGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: STRPAYRVAARNSFSICRVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...CCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTTGCCAGGTCAGGATGTaGTGGGGGCTGCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSCQVRM*WGLLGG
Trigger: CCCACCAAGCAGCCCCCACCACATCCTGACCTGGCA...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
3UTR CAA 72 bp CAGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTaGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QASRASFIFTVP*GLFPALRSAPG
Trigger: TCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 72 bp TGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTaGCAACTCTGCTCTGCCTGCCAACTGGTAGACGTG +
Preference number: 4 (lower is better)
Translates to: CWRGLGPLGAEL*QLCSACQLVDV
Trigger: CACGTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTCGCCCAAATGGACTTaGTCAATGCCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPSPKWT*SMPDTH
Trigger: ATGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGA...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCCAGGCAATTTTCCTGTaGGTTCAGCTTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPQAIFL*VQLPGD
Trigger: GTCTCCGGGAAGCTGAACTCACAGGAAAATTGCCTG...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCCAGGCAATTTTCCTGTaGGTTCAGCTTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASQAIFL*VQLPGD
Trigger: GTCTCCGGGAAGCTGAACTCACAGGAAAATTGCCTG...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGGCGGGCGGCCTCTGTaGTCTGGGACTGAATCGCAA +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHGGRPL*SGTESQ
Trigger: TTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCC...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAAGATAGTGCAGCTGCCTaGGTCCCTCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQDSAAA*VPPGTV
Trigger: CACAGTCCCTGGAGGGACTCAGGCAGCTGCACTATC...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTTGGGGTCTGAGCCATTaGTGCTACGAGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGWGLSH*CYESSG
Trigger: CCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCA...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSSSSGW*RTSSRP
Trigger: TGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCT...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGACCGCCAGGTTGGGCATaGTGCCAGAGCTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGPPGWA*CQSWLS
Trigger: GCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGG...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGGTCGCTCTCCAGGCTaGGTACCACCACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGGRSPG*VPPRVW
Trigger: CCACACCCGTGGTGGTACGCAGCCTGGAGAGCGACC...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGGTCGCTCTCCAGGCTaGGTACCACCACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKGRSPG*VPPRVW
Trigger: CCACACCCGTGGTGGTACGCAGCCTGGAGAGCGACC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGTGTGCGCCACGAAGGTaGTCTGGGAAGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWECAPRR*SGKRCC
Trigger: ACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACA...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAPPNNR*FLAWIQ
Trigger: CTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGG...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAAGTGGGAGGCTTCGGATaGGACTGTTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPEVGGFG*DCSARS
Trigger: GCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCAC...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGGTGGGAGGCTTCGGATaGGACTGTTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQVGGFG*DCSARS
Trigger: GCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCAC...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGTGGGAGGCTTCGGATaGGACTGTTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQVGGFG*DCSARS
Trigger: GCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCAC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGCACTCGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGACGAGCAGTCGTCCATaGGGTCTGAGCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: STRPAYRVAARNSFSICRTSSRP*GLSHCC
Trigger: GCAGCAATGGCTCAGACCCCATGGACGACTGCTCGT...CCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQLSSSG*CRTSSR
Trigger: ACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTTGCTCTGAGCTCGAGTaGCTGGTGCAGGACGAGCAG +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGCSELE*LVQDEQ
Trigger: CTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCA...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPPALSS*RSSVLG
Trigger: ACCCAGCACAGATGAACGCCAACTACTCAACGCTGG...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGCCCTGCGAGGGTCATaGACTTCCACGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFALRGS*TSTENF
Trigger: GAAGTTTTCCGTGGAAGTTCATGACCCTCGCAGGGC...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCTCGCCCAAATGGACTTaGTCAATGCCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPASPKWT*SMPDTH
Trigger: ATGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGA...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGGCGGGCGGCCTCTGTaGTCTGGGACTGAATCGCAA +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEGGRPL*SGTESQ
Trigger: TTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCC...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCATCATCGATGACAAGTaGAGCCCTCTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASIIDDK*SPLGGF
Trigger: AAACCCACCCAGAGGGCTTCACTTGTCATCGATGAT...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGTCCTCAGCCAGCGTTaGGTAGTTGGCGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQVLSQR*VVGVHL
Trigger: CAGATGAACGCCAACTACTCAACGCTGGCTGAGGAC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHSLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGA...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCGCGCCAGCTCTCTTTaGACAGGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESRASSL*TGRQLC
Trigger: ACACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCG...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACGCGCCAGCTCTCTTTaGACAGGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPRASSL*TGRQLC
Trigger: ACACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAEEVLY*EPLSEE
Trigger: CTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGACGGCAATGCCACTGTaGCCAAAAGTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQTAMPL*PKVLLV
Trigger: GACCAGGAGGACTTTTGGGCACAGTGGCATTGCCGT...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATCCTCCAGAGCTTCCTaGCTGGATTTCAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQSSRAS*LDFKAA
Trigger: GGCTGCCTTGAAATCCAGGCAGGAAGCTCTGGAGGA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGTCCTCCAGAGCTTCCTaGCTGGATTTCAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQSSRAS*LDFKAA
Trigger: GGCTGCCTTGAAATCCAGGCAGGAAGCTCTGGAGGA...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGGGAGCTGCTTACTCCTaGCTCGGTACAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQGAAYS*LGTASC
Trigger: ACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCC...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCCTTCGATGCCTAAAGTaGAGTGCAAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSHVQTDRVRVCQASRASLRCLK*SARLCS
Trigger: ACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAG...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCCTTCGATGCCTAAAGTaGAGTGCAAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGLRCLK*SARLCS
Trigger: ACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAG...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CCTAGAGCGTTCATCACCAACCACAGCGACCATTTATTATGTCAGTCTCAAAGGGCGCCTGCTGCCCGCTaGCTCTGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRAFITNHSDHLLCQSQRAPAAR*LCRCRC
Trigger: GCAGCGACAGCGGCAGAGGCAGCGGGCAGCAGGCGC...CCTTTGAGACTGACATAATAAATGGTCGCTGTGGTTGGTGATGAACGCTCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTCCAGGTTGGGCATGCTaGCAGAGCTGGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVPGWAC*QSWLSP
Trigger: TGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGG...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGGCTGGCTCTGGCTGTaGAGGTACACGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVGWLWL*RYTPPP
Trigger: TGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAGGCTGGCTCTGGCTGTaGAGGTACACGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPGWLWL*RYTPPP
Trigger: TGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCC...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCGGGCCGCATGGATCTTaGACTTACTCTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGGPHGS*TYSAFC
Trigger: ACAGAAAGCAGAGTAAGTCCAAGATCCATGCGGCCC...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPPTCLS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGG...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCAC +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWERWFLA*IQGIFH
Trigger: GTGGAATATCCCCTGGATCCAGGCGAGGAACCACCT...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAAAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCAC +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPERWFLA*IQGIFH
Trigger: GTGGAATATCCCCTGGATCCAGGCGAGGAACCACCT...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCGCTTGTGGCTGCTaGAATGGCCGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGSACGC*NGRGRS
Trigger: GCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCT...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAAGCGCTTGTGGCTGCTaGAATGGCCGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPSACGC*NGRGRS
Trigger: GCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCT...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGATAGAGGGCTGGGGAAGCGCTTGTaGCTGCTGGAATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AWLFPARTIGHQLALDRGLGKRL*LLEWPW
Trigger: CCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAG...CCCTCTATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGACTGGGGAAGCGCTTGTaGCTGCTGGAATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARLGKRL*LLEWPW
Trigger: CCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAG...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGCTGGGGAAGCGCTTGTaGCTGCTGGAATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIELGKRL*LLEWPW
Trigger: CCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAG...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAATACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQYSFLC*GSACGC
Trigger: GCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTA...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGVWALWELSCCNSALPADGMLD*EFQCGR
Trigger: CCTCCCACATTGGAATTCCCAGTCTAGCATGCCATC...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACCGGACGCGCAGGTCTaGGGTGGATGGCATGCTAGA +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPPDAQV*GGWHAR
Trigger: TCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGAGCTGGGCTGGCTCTaGCTGTGCAGGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVELGWL*LCRYTP
Trigger: TGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGCTC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGAGCTGGGCTGGCTCTaGCTGTGCAGGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKELGWL*LCRYTP
Trigger: TGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGCTC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGAGCTGGGCTGGCTCTaGCTGTGCAGGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEELGWL*LCRYTP
Trigger: TGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGCTC...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACG +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHGCLVG*LQFHWT
Trigger: CGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCC...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGTGCCAGGTCAGGATGTaGTGGGGGCTGCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIECQVRM*WGLLGG
Trigger: CCCACCAAGCAGCCCCCACCACATCCTGACCTGGCA...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGATGCCAGGTCAGGATGTaGTGGGGGCTGCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGCQVRM*WGLLGG
Trigger: CCCACCAAGCAGCCCCCACCACATCCTGACCTGGCA...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
3UTR CAA 72 bp AGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTaGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRASFIFTVPLG*FPALRSAPGEG
Trigger: CCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 72 bp TACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTaGTTGCAACTCTGCTCTGCCTGCCAACTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: YCWRGLGPLGAE*LQLCSACQLVD
Trigger: GTCTACCAGTTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGGGTGGGTTTCTTCCCTaGCTTGATGCGGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWEGGFLP*LDAVLV
Trigger: AACGAGAACCGCATCAAGTCAGGGAAGAAACCCACC...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGTCGTCCATGGGGTCTaGGCCATTGCTGCTACGAGT +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSVVHGV*AIAATS
Trigger: ACTCGTAGCAGCAATGGCTCAGACCCCATGGACGAC...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTGTCCTCAGCCAGCGTTaGGTAGTTGGCGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGVLSQR*VVGVHL
Trigger: CAGATGAACGCCAACTACTCAACGCTGGCTGAGGAC...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVSLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGA...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGATAGTGGGTACTCCTTaGTGCGGTACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWEIVGTP*CGTESW
Trigger: CCAGCTCTCAGTACCGCATCAAGGAGTACCCACTAT...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACACGGCAATGCCACTGTaGCCAAAAGTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHTAMPL*PKVLLV
Trigger: GACCAGGAGGACTTTTGGGCACAGTGGCATTGCCGT...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTTGCAGTGCAAGGCTGTaGAGTCTCGTGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSCSARL*SLVGLM
Trigger: CATCAGCCCCACGAGACTGCACAGCCTTGCACTGCA...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTAGGCTGGAGCTTCGATaGCTAAAGTGCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFRLELR*LKCSAR
Trigger: CCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCT...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATGGGGTCTGAGCCATTaGTGCTACGAGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPWGLSH*CYESSG
Trigger: CCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCA...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTTGGGGTCTGAGCCATTaGTGCTACGAGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGWGLSH*CYESSG
Trigger: CCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCA...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCCCAGGTTGGGCATGCTaGCAGAGCTGGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLPGWAC*QSWLSP
Trigger: TGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGG...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGGCTTGGCTTTTTCCTaGCCGTACCATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAGLAFS*PYHWTS
Trigger: TGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCC...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
CDS-3UTR CCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTCCGGCCCAGACTTTTTaGGGAAGTCATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSPAQTF*GSHAPG
Trigger: TCCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGG...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCAC +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGRWFLA*IQGIFH
Trigger: GTGGAATATCCCCTGGATCCAGGCGAGGAACCACCT...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTCTGCTGGAATGGCCGTaGGAGGAGCGTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSLLEWP*EERFFT
Trigger: GGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAG...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLPALSS*RSSVLG
Trigger: ACCCAGCACAGATGAACGCCAACTACTCAACGCTGG...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGCACTCGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGGTACCACCACGGGTGTaGCACTGCCCTCGATATATA +
Preference number: 4 (lower is better)
Translates to: STRPAYRVAARNSFSICRVPPRV*HCPRYI
Trigger: TATATATCGAGGGCAGTGCCACACCCGTGGTGGTAC...CCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACG +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPERWYH*RSSSDT
Trigger: CGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTC...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACG +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARERWYH*RSSSDT
Trigger: CGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTC...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALEAVER*YHWRSS
Trigger: TGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTC...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTCCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGPYARL*SAGTTG
Trigger: GCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGG...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGATAGAGGGCGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: AWLFPARTIGHQLALDRGRCPRR*SWCVTD
Trigger: GTCTGTCACACACCAGCTCCACCTCCTCGGACAGCG...CCCTCTATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPRCPRR*SWCVTD
Trigger: GTCTGTCACACACCAGCTCCACCTCCTCGGACAGCG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTTCAAGGAGATGTACTTaGCATCGACGGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSASRRCT*HRRPSV
Trigger: GACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGA...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTGCTGACATTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTTTGTTCATCCAGCTTaGAGGCTGTTCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLTLGSLARRRAASVIWDFVHPA*RLFQFS
Trigger: GGAGAATTGGAACAGCCTTCAAGCTGGATGAACAAA...GTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAATGTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR TCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACGGTGGGTTTCTTCCCTaGCTTGATGCGGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHGGFLP*LDAVLV
Trigger: AACGAGAACCGCATCAAGTCAGGGAAGAAACCCACC...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCATCATCGATGACAAGTaGAGCCCTCTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLIIDDK*SPLGGF
Trigger: AAACCCACCCAGAGGGCTTCACTTGTCATCGATGAT...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGTCGTCCATGGGGTCTaGGCCATTGCTGCTACGAGT +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKVVHGV*AIAATS
Trigger: ACTCGTAGCAGCAATGGCTCAGACCCCATGGACGAC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATGGGTAGTAGTGCTCTaGGCTCGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPWVVVL*ARVAGA
Trigger: TGCACCAGCCACTCGAGCTCAGAGCACTACTACCCA...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCTGGGTAGTAGTGCTCTaGGCTCGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESWVVVL*ARVAGA
Trigger: TGCACCAGCCACTCGAGCTCAGAGCACTACTACCCA...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGTCCTCAGCCAGCGTTaGGTAGTTGGCGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAVLSQR*VVGVHL
Trigger: CAGATGAACGCCAACTACTCAACGCTGGCTGAGGAC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALGGAGV*QTAVLL
Trigger: AAGGAGCACAGCCGTCTGTCACACACCAGCTCCACC...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACTTCACTGGACGGTGTTaGGCTTCTCTGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHFTGRC*ASLALR
Trigger: CCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAA...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCAACGGCAATGCCACTGTaGCCAAAAGTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TPASHTTSTETLVPSLVPTAMPL*PKVLLV
Trigger: GACCAGGAGGACTTTTGGGCACAGTGGCATTGCCGT...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTTCCTCCAGAGCTTCCTaGCTGGATTTCAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGLNRKLSFQAFQLSFLPSSRAS*LDFKAA
Trigger: GGCTGCCTTGAAATCCAGGCAGGAAGCTCTGGAGGA...AGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR GCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALRYSFL*WGSACG
Trigger: GCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCG...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTTGCAGTGCAAGGCTGTaGAGTCTCGTGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFCSARL*SLVGLM
Trigger: CATCAGCCCCACGAGACTGCACAGCCTTGCACTGCA...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGATGCCTAAAGTGCAGTaGAAGGCTGTGCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQMPKVQ*KAVQSR
Trigger: ACGAGACTGCACAGCCTTGCACTGCACTTTAGGCAT...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAATGCCTAAAGTGCAGTaGAAGGCTGTGCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRMPKVQ*KAVQSR
Trigger: ACGAGACTGCACAGCCTTGCACTGCACTTTAGGCAT...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLSSSGW*RTSSRP
Trigger: TGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCT...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTACACGCCACCTCCAGTaGTTGCAGCCCCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTTRHLQ*LQPRCG
Trigger: CCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGT...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGTGTGCGCCACGAAGGTaGTCTGGGAAGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIECAPRR*SGKRCC
Trigger: ACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACA...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGGGAGAGTTTTCTGTTaGTTCTCCAGTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQGRVFC*FSSLPG
Trigger: ACCTGGCAGACTGGAGAAGCAACAGAAAACTCTCCC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCCTTCAGGGCTTGGGTaGGTAGCGCTGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKPSGLG*VALAAF
Trigger: AAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGG...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGGGGCCGCATGGATCTTaGACTTACTCTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQGPHGS*TYSAFC
Trigger: ACAGAAAGCAGAGTAAGTCCAAGATCCATGCGGCCC...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQPTCLS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGG...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCACTCGCTCCACATTTTaGGCTTTAAGGGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: RPAYRVAARNSFSICRQGTRSTF*ALRVTC
Trigger: ACAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGT...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTCTGCTGGAATGGCCGTaGGAGGAGCGTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFLLEWP*EERFFT
Trigger: GGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAG...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACTGCTGGAATGGCCGTaGGAGGAGCGTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPLLEWP*EERFFT
Trigger: GGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGATTGTGGCTGCTGGAATaGCCGTGGGAGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGLWLLE*PWEERF
Trigger: GAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAA...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTTTGTGGCTGCTGGAATaGCCGTGGGAGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFLWLLE*PWEERF
Trigger: GAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAA...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTTACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGYSFLC*GSACGC
Trigger: GCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTA...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCTGTCCACTGACCTTGTaGAATGAACATAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPACPLTL*NEHSGD
Trigger: GTCCCCACTATGTTCATTCCACAAGGTCAGTGGACA...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTACGAGCAGTCGTCCATaGGGTCTGAGCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGTSSRP*GLSHCC
Trigger: GCAGCAATGGCTCAGACCCCATGGACGACTGCTCGT...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTGTACCACCACGGGTGTaGCACTGCCCTCGATATATA +
Preference number: 4 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGVPPRV*HCPRYI
Trigger: TATATATCGAGGGCAGTGCCACACCCGTGGTGGTAC...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACG +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLERWYH*RSSSDT
Trigger: CGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTC...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTGTGGGGGCTGCTTGGTaGGGTGGCTCCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFVGAAW*GGSNFT
Trigger: AGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCAC...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTGTGGGGGCTGCTTGGTaGGGTGGCTCCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPVGAAW*GGSNFT
Trigger: AGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCAC...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTTCCTTCAGGTTGAAATaGGAGGCCACGAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGSFRLK*EATRSR
Trigger: TCTTGACCTCGTGGCCTCTCATTTCAACCTGAAGGA...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTGCCCTGCGAGGGTCATaGACTTCCACGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFALRGS*TSTENF
Trigger: GAAGTTTTCCGTGGAAGTTCATGACCCTCGCAGGGC...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCCAGGCAATTTTCCTGTaGGTTCAGCTTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: SGTESQTLVPGVPAQLPSQAIFL*VQLPGD
Trigger: GTCTCCGGGAAGCTGAACTCACAGGAAAATTGCCTG...GGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR TCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGGTGGGTTTCTTCCCTaGCTTGATGCGGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSGGFLP*LDAVLV
Trigger: AACGAGAACCGCATCAAGTCAGGGAAGAAACCCACC...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGGTGGGTTTCTTCCCTaGCTTGATGCGGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAGGFLP*LDAVLV
Trigger: AACGAGAACCGCATCAAGTCAGGGAAGAAACCCACC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATATTTCCATCATCGATaGCAAGTGAAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQYFHHR*QVKPSG
Trigger: CCCAGAGGGCTTCACTTGTCATCGATGATGGAAATA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGTATTTCCATCATCGATaGCAAGTGAAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQYFHHR*QVKPSG
Trigger: CCCAGAGGGCTTCACTTGTCATCGATGATGGAAATA...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPAIVLVT*ESSSSR
Trigger: TCTGGAAGATGAAGACTCTCAGGTTACCAGCACAAT...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATGATAGTGCAGCTGCCTaGGTCCCTCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYDSAAA*VPPGTV
Trigger: CACAGTCCCTGGAGGGACTCAGGCAGCTGCACTATC...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCCTCAGCCAGCGTTaGGTAGTTGGCGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVVLSQR*VVGVHL
Trigger: CAGATGAACGCCAACTACTCAACGCTGGCTGAGGAC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATATAGTGGGTACTCCTTaGTGCGGTACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHIVGTP*CGTESW
Trigger: CCAGCTCTCAGTACCGCATCAAGGAGTACCCACTAT...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGATCAGCTCCTTGTAGATaGAGGACTTGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRSAPCR*RTWHSG
Trigger: TCCTGAATGCCAAGTCCTGCATCTACAAGGAGCTGA...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGAATGGACTTGATCAATaGCGGACACGCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQNGLDQ*RTRIPG
Trigger: ACCTGGTATGCGTGTCCGGCATTGATCAAGTCCATT...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCTCCTCCAGAGCTTCCTaGCTGGATTTCAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESSSRAS*LDFKAA
Trigger: GGCTGCCTTGAAATCCAGGCAGGAAGCTCTGGAGGA...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAGGAGCTGCTTACTCCTaGCTCGGTACAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPGAAYS*LGTASC
Trigger: ACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCC...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATCGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCT +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHRMGLF*KELLTP
Trigger: AGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCG...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGTGCAGTGCAAGGCTGTaGAGTCTCGTGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALCSARL*SLVGLM
Trigger: CATCAGCCCCACGAGACTGCACAGCCTTGCACTGCA...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTATGCCTAAAGTGCAGTaGAAGGCTGTGCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGMPKVQ*KAVQSR
Trigger: ACGAGACTGCACAGCCTTGCACTGCACTTTAGGCAT...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACCTTCGATGCCTAAAGTaGAGTGCAAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHLRCLK*SARLCS
Trigger: ACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAG...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGGGATGTGGTGGGGGCTaGTTGGTGGGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGGCGGG*LVGWLQ
Trigger: TTGGAGCCACCCCACCAAGCAGCCCCCACCACATCC...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTTGCTTCTCCAGTCTaGCAGGTCAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVVASPV*QVRMWW
Trigger: CCACCACATCCTGACCTGGCAGACTGGAGAAGCAAC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHPTCLS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGG...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCAC +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESRWFLA*IQGIFH
Trigger: GTGGAATATCCCCTGGATCCAGGCGAGGAACCACCT...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKPPNNR*FLAWIQ
Trigger: CTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGG...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGTGATCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CDLGLNRKLSFQAFQLSFPPNNR*FLAWIQ
Trigger: CTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGG...GAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CCA 90 bp TACCCTGCTCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCACTCGCTCCACATTTTaGGCTTTAAGGGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: YPAPPMSRQIESESARPATRSTF*ALRVTC
Trigger: ACAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGT...GGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGAGCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACTGCGGTACTGAGAGCTaGGCTGGCTCTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYCGTES*AGSGCA
Trigger: TGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCA...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGTGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RWCIEVTDTAGGVWALWEWLQFH*TVLSFS
Trigger: AGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCA...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 72 bp TGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATaGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: WVSWQTETTKVP*RIVVWLSGQES
Trigger: GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGATAGAGGGTCGCCCAAATGGACTTaGTCAATGCCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: AWLFPARTIGHQLALDRGSPKWT*SMPDTH
Trigger: ATGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGA...CCCTCTATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTGAGCTATCTGATTCCTaGGAACCTGAGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLNRKLSFQAFQLSFLPELSDS*EPEDSR
Trigger: TCTGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTC...AGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR TCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATTTGTTCATCCAGCTTaGAGGCTGTTCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPEFVHPA*RLFQFS
Trigger: GGAGAATTGGAACAGCCTTCAAGCTGGATGAACAAA...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATATCATCGATGACAAGTaGAGCCCTCTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHIIDDK*SPLGGF
Trigger: AAACCCACCCAGAGGGCTTCACTTGTCATCGATGAT...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGEEVLY*EPLSEE
Trigger: CTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTC...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCTCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTTTCACTGGACGGTGTTaGGCTTCTCTGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVFTGRC*ASLALR
Trigger: CCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAA...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGRYSFL*WGSACG
Trigger: GCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCG...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCT +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPRMGLF*KELLTP
Trigger: AGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTCGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCT +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGRMGLF*KELLTP
Trigger: AGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCG...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTCTTCGATGCCTAAAGTaGAGTGCAAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSLRCLK*SARLCS
Trigger: ACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAG...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTGCGCCTGCTGCCCGCTaGCTCTGCCGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPAPAAR*LCRCRC
Trigger: GCAGCGACAGCGGCAGAGGCAGCGGGCAGCAGGCGC...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTGGCTGGCTCTGGCTGTaGAGGTACACGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTGWLWL*RYTPPP
Trigger: TGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCC...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTCCTTGGCCAAAAGCTTaGGCTGTACTAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPPWPKA*AVLAAP
Trigger: TGGAGCTGCTAGTACAGCCCAAGCTTTTGGCCAAGG...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGACCTTGGCCAAAAGCTTaGGCTGTACTAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARPWPKA*AVLAAP
Trigger: TGGAGCTGCTAGTACAGCCCAAGCTTTTGGCCAAGG...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTCCTTGGCCAAAAGCTTaGGCTGTACTAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFPWPKA*AVLAAP
Trigger: TGGAGCTGCTAGTACAGCCCAAGCTTTTGGCCAAGG...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCCCGGCCCAGACTTTTTaGGGAAGTCATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLPAQTF*GSHAPG
Trigger: TCCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGG...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGCACTCGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGTGTAGATGCAGGACTTaGCATTCAGGAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: STRPAYRVAARNSFSICRCRCRT*HSGRRA
Trigger: AGCTCTTCTTCCTGAATGCCAAGTCCTGCATCTACA...CCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCGAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGGGCCGCATGGATCTTaGACTTACTCTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAGPHGS*TYSAFC
Trigger: ACAGAAAGCAGAGTAAGTCCAAGATCCATGCGGCCC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: LGLNRKLSFQAFQLSFLPPTCLS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGG...AGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CCA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCACCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: TPASHTTSTETLVPSLVPPTCLS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGG...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCACTCGCTCCACATTTTaGGCTTTAAGGGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLTRSTF*ALRVTC
Trigger: ACAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGT...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTACCACCACGGGTGTaGCACTGCCCTCGATATATA +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVVPPRV*HCPRYI
Trigger: TATATATCGAGGGCAGTGCCACACCCGTGGTGGTAC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGCCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGPYARL*SAGTTG
Trigger: GCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGG...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACG +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYGCLVG*LQFHWT
Trigger: CGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCC...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTAGTACTTTGGTGTGTTaGAGACTCAGACCCATCCAT +
Preference number: 4 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFSTLVC*RLRPIH
Trigger: ATGGATGGGTCTGAGTCTCCAACACACCAAAGTACT...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGTCCTGCCCGTACCATTaGACATCAGCTAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIESCPYH*TSASSG
Trigger: TCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGA...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
CDS-3UTR TCA 90 bp GGAAAATTCCTTTGTAGCTCAGTCCCAGCCACCATGGTATCCCCTGCTTGTCTTTCAAGGAGATGTACTTaGCATCGACGGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GKFLCSSVPATMVSPACLSRRCT*HRRPSV
Trigger: GACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGA...AAGACAAGCAGGGGATACCATGGTGGCTGGGACTGAGCTACAAAGGAATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR TCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATTCAAGGAGATGTACTTaGCATCGACGGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYSRRCT*HRRPSV
Trigger: GACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGA...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCTTGTAGTACTCAATaGCTCTGTCTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLSCSTQ*LCLHSR
Trigger: CCTACTGTGAAGACAGAGTCATTGAGTACTACAAGA...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATCTTGTAGTACTCAATaGCTCTGTCTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: RGLGPLGAELLQLCSACQSCSTQ*LCLHSR
Trigger: CCTACTGTGAAGACAGAGTCATTGAGTACTACAAGA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATGCCCTGCGAGGGTCATaGACTTCCACGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYALRGS*TSTENF
Trigger: GAAGTTTTCCGTGGAAGTTCATGACCCTCGCAGGGC...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGAGCTATCTGATTCCTaGGAACCTGAGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEELSDS*EPEDSR
Trigger: TCTGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTC...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCGAGCTATCTGATTCCTaGGAACCTGAGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESELSDS*EPEDSR
Trigger: TCTGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTC...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGATAGTGGGTACTCCTTaGTGCGGTACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALIVGTP*CGTESW
Trigger: CCAGCTCTCAGTACCGCATCAAGGAGTACCCACTAT...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCCGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLRLCSL*EAVERW
Trigger: CCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCG...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGGGAGAGTTTTCTGTTaGTTCTCCAGTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARGRVFC*FSSLPG
Trigger: ACCTGGCAGACTGGAGAAGCAACAGAAAACTCTCCC...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CACGATACTCATGTAGTTCACGATTGCTTGTCCCCTCGTCTGGCCATTCAGCTTCCGGCCCAGACTTTTTaGGGAAGTCATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HDTHVVHDCLSPRLAIQLPAQTF*GSHAPG
Trigger: TCCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGG...AAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CCA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGTGAACACCGTAGGTTaGCAGAGACTCCACGATACT +
Preference number: 4 (lower is better)
Translates to: DGNHQGAIEDCCLALWARVNTVG*QRLHDT
Trigger: AGTATCGTGGAGTCTCTGCCAACCTACGGTGTTCAC...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAGTGAACACCGTAGGTTaGCAGAGACTCCACGATACT +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGVNTVG*QRLHDT
Trigger: AGTATCGTGGAGTCTCTGCCAACCTACGGTGTTCAC...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGGGCCGCATGGATCTTaGACTTACTCTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEGPHGS*TYSAFC
Trigger: ACAGAAAGCAGAGTAAGTCCAAGATCCATGCGGCCC...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTTGTGGCTGCTGGAATaGCCGTGGGAGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSLWLLE*PWEERF
Trigger: GAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAA...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSYSFLC*GSACGC
Trigger: GCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTA...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVDGMLD*EFQCGR
Trigger: CCTCCCACATTGGAATTCCCAGTCTAGCATGCCATC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACG +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTERWYH*RSSSDT
Trigger: CGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTC...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCATGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPASHTTSTETLVPSLVPWLQFH*TVLSFS
Trigger: AGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCA...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTGTCCCGTCTCATCTGTaGATGCTATTCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAVPSHL*MLFQST
Trigger: AGTACTTTGGAATAGCATTCACAGATGAGACGGGAC...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTTCTTGTAGTACTCAATaGCTCTGTCTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSSCSTQ*LCLHSR
Trigger: CCTACTGTGAAGACAGAGTCATTGAGTACTACAAGA...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTTTTGTTCATCCAGCTTaGAGGCTGTTCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: RASFIFTVPLGLFPALRSFVHPA*RLFQFS
Trigger: GGAGAATTGGAACAGCCTTCAAGCTGGATGAACAAA...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTTATTTCCATCATCGATaGCAAGTGAAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGYFHHR*QVKPSG
Trigger: CCCAGAGGGCTTCACTTGTCATCGATGATGGAAATA...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAIVLVT*ESSSSR
Trigger: TCTGGAAGATGAAGACTCTCAGGTTACCAGCACAAT...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACTTCACTGGACGGTGTTaGGCTTCTCTGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYFTGRC*ASLALR
Trigger: CCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAA...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAACGTCTCATCTGTGAATaGTATTCCAAAGTACTCCTT +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPERLICE*YSKVLL
Trigger: AAGGAGTACTTTGGAATAGCATTCACAGATGAGACG...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGAATGGACTTGATCAATaGCGGACACGCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: TVCGLGIMADGNHQGAIENGLDQ*RTRIPG
Trigger: ACCTGGTATGCGTGTCCGGCATTGATCAAGTCCATT...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCAATGGACTTGATCAATaGCGGACACGCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESNGLDQ*RTRIPG
Trigger: ACCTGGTATGCGTGTCCGGCATTGATCAAGTCCATT...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAACTGCAGCTTCTTCAGTaGATTCAAATAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALWAREPGDTQWVRNLPELQLLQ*IQIRGL
Trigger: AAGACCTCTTATTTGAATGCACTGAAGAAGCTGCAG...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGRLCSL*EAVERW
Trigger: CCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGAGAGCTGTCTTCGCTaGCGATATTTCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGESCLR*RYFHHR
Trigger: TCGATGATGGAAATATCGCCAGCGAAGACAGCTCTC...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGGAGAGCTGTCTTCGCTaGCGATATTTCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKESCLR*RYFHHR
Trigger: TCGATGATGGAAATATCGCCAGCGAAGACAGCTCTC...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCTGGGGAAGCGCTTGTaGCTGCTGGAATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGLGKRL*LLEWPW
Trigger: CCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLDGMLD*EFQCGR
Trigger: CCTCCCACATTGGAATTCCCAGTCTAGCATGCCATC...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCCGGACGCGCAGGTCTaGGGTGGATGGCATGCTAGA +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGPDAQV*GGWHAR
Trigger: TCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGATGTCCACTGACCTTGTaGAATGAACATAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGCPLTL*NEHSGD
Trigger: GTCCCCACTATGTTCATTCCACAAGGTCAGTGGACA...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGGCCCTCCGTCATCTTaGTTCTCATCGGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYGPPSS*FSSEIG
Trigger: TCCTATCTCCGATGAGAACCAAGATGACGGAGGGCC...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091497.11
CDS-3UTR TCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPIVLVT*ESSSSR
Trigger: TCTGGAAGATGAAGACTCTCAGGTTACCAGCACAAT...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGATAGAGGGATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AWLFPARTIGHQLALDRGIVLVT*ESSSSR
Trigger: TCTGGAAGATGAAGACTCTCAGGTTACCAGCACAAT...CCCTCTATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGGGAGV*QTAVLL
Trigger: AAGGAGCACAGCCGTCTGTCACACACCAGCTCCACC...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTTCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACGTCTCATCTGTGAATaGTATTCCAAAGTACTCCTT +
Preference number: 4 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQRLICE*YSKVLL
Trigger: AAGGAGTACTTTGGAATAGCATTCACAGATGAGACG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTCGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCT +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSRMGLF*KELLTP
Trigger: AGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCG...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGAGGCTGGAGCTTCGATaGCTAAAGTGCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGRLELR*LKCSAR
Trigger: CCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCT...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTGGTCGCTCTCCAGGCTaGGTACCACCACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGGRSPG*VPPRVW
Trigger: CCACACCCGTGGTGGTACGCAGCCTGGAGAGCGACC...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTPPNNR*FLAWIQ
Trigger: CTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGG...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYDGMLD*EFQCGR
Trigger: CCTCCCACATTGGAATTCCCAGTCTAGCATGCCATC...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSPALSS*RSSVLG
Trigger: ACCCAGCACAGATGAACGCCAACTACTCAACGCTGG...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCATGCGGGCCGCCAGGTTaGGCATGCTGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPCGPPG*ACCQSW
Trigger: CCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCA...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTGCGGTACTGAGAGCTaGGCTGGCTCTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGCGTES*AGSGCA
Trigger: TGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAAGTACTTTGGTGTGTTaGAGACTCAGACCCATCCAT +
Preference number: 4 (lower is better)
Translates to: HDKVTPASHTTSTETLVPSTLVC*RLRPIH
Trigger: ATGGATGGGTCTGAGTCTCCAACACACCAAAGTACT...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR CAA 72 bp TTGGCAGAGACTCCACGATACTCATGTAGTTCACGATaGCTTGTCCCCTCGTCTGGCCATTCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LAETPRYSCSSR*LVPSSGHSASC
Trigger: ACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR TCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCATTGGACATCAGCTAGCTCTGGATAGAGGGTCCAACTGTCTCCATTaGAATATCTTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AWLFPARTIGHQLALDRGSNCLH*NIFLGF
Trigger: GAAGCCAAGGAAGATATTTCAATGGAGACAGTTGGA...CCCTCTATCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTTCCAACTGTCTCCATTaGAATATCTTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PIGWQPETASVSAGRASFSNCLH*NIFLGF
Trigger: GAAGCCAAGGAAGATATTTCAATGGAGACAGTTGGA...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTTCCAACTGTCTCCATTaGAATATCTTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPSNCLH*NIFLGF
Trigger: GAAGCCAAGGAAGATATTTCAATGGAGACAGTTGGA...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTGAGCTATCTGATTCCTaGGAACCTGAGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSELSDS*EPEDSR
Trigger: TCTGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTC...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTATAGTGGGTACTCCTTaGTGCGGTACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTIVGTP*CGTESW
Trigger: CCAGCTCTCAGTACCGCATCAAGGAGTACCCACTAT...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCGGAGCTGCTTACTCCTaGCTCGGTACAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLGAAYS*LGTASC
Trigger: ACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCC...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTCTCTGACTAGGCTGGAGCTTCGATaGCTAAAGTGCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VDVCKKSSYLRAYVSSLTRLELR*LKCSAR
Trigger: CCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCT...AGTCAGAGAACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGTGGGGTCTGAGCCATTaGTGCTACGAGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGWGLSH*CYESSG
Trigger: CCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCA...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTCCAGGTTGGGCATGCTaGCAGAGCTGGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGPGWAC*QSWLSP
Trigger: TGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGG...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTCGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGRLCSL*EAVERW
Trigger: CCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCG...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTGTGAACACCGTAGGTTaGCAGAGACTCCACGATACT +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSVNTVG*QRLHDT
Trigger: AGTATCGTGGAGTCTCTGCCAACCTACGGTGTTCAC...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLPPNNR*FLAWIQ
Trigger: CTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGG...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCTGCTGGAATGGCCGTaGGAGGAGCGTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGLLEWP*EERFFT
Trigger: GGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTTGTGGCTGCTGGAATaGCCGTGGGAGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGLWLLE*PWEERF
Trigger: GAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGCTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGLSSSG*CRTSSR
Trigger: ACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAG...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACTGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYWLQFH*TVLSFS
Trigger: AGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCA...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTGTGGGGGCTGCTTGGTaGGGTGGCTCCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGVGAAW*GGSNFT
Trigger: AGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCAC...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCATATTCATCAGTACTTTaGTGTGTTGGAGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: TPASHTTSTETLVPSLVPYSSVL*CVGDSD
Trigger: GTCTGAGTCTCCAACACACCAAAGTACTGATGAATA...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
3UTR CAA 72 bp CAGAGACTCCACGATACTCATGTAGTTCACGATTGCTaGTCCCCTCGTCTGGCCATTCAGCTTCTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: QRLHDTHVVHDC*SPRLAIQLLVV
Trigger: TACTACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR TCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPSLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGA...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPEEVLY*EPLSEE
Trigger: CTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTC...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCTGCAGCTTCTTCAGTaGATTCAAATAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKLQLLQ*IQIRGL
Trigger: AAGACCTCTTATTTGAATGCACTGAAGAAGCTGCAG...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCAGGCTGGAGCTTCGATaGCTAAAGTGCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLRLELR*LKCSAR
Trigger: CCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCT...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ATGGTAGTCATACTGGAAAATTCCTTTGTAGCTCAGTCCCAGCCACCATGGTATCCTTGGCCAAAAGCTTaGGCTGTACTAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MVVILENSFVAQSQPPWYPWPKA*AVLAAP
Trigger: TGGAGCTGCTAGTACAGCCCAAGCTTTTGGCCAAGG...ATACCATGGTGGCTGGGACTGAGCTACAAAGGAATTTTCCAGTATGACTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CCA 90 bp CACGATTGCTTGTCCCCTCGTCTGGCCATTCAGCTTCTTGTAGTACTCAATGACTGTAGATGCAGGACTTaGCATTCAGGAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: HDCLSPRLAIQLLVVLNDCRCRT*HSGRRA
Trigger: AGCTCTTCTTCCTGAATGCCAAGTCCTGCATCTACA...GTCATTGAGTACTACAAGAAGCTGAATGGCCAGACGAGGGGACAAGCAATCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGGAGAGCTGTCTTCGCTaGCGATATTTCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGESCLR*RYFHHR
Trigger: TCGATGATGGAAATATCGCCAGCGAAGACAGCTCTC...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTAGCGCTTGTGGCTGCTaGAATGGCCGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLSACGC*NGRGRS
Trigger: GCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCT...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATCCGGACGCGCAGGTCTaGGGTGGATGGCATGCTAGA +
Preference number: 4 (lower is better)
Translates to: HSLLAETSNFLHVSNESNPDAQV*GGWHAR
Trigger: TCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGG...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGTGTCCACTGACCTTGTaGAATGAACATAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGCPLTL*NEHSGD
Trigger: GTCCCCACTATGTTCATTCCACAAGGTCAGTGGACA...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTTGTCCACTGACCTTGTaGAATGAACATAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSCPLTL*NEHSGD
Trigger: GTCCCCACTATGTTCATTCCACAAGGTCAGTGGACA...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTTGCTCTGAGCTCGAGTaGCTGGTGCAGGACGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGCSELE*LVQDEQ
Trigger: CTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCA...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KQAISYMYPTNPIGALNWEAVER*YHWRSS
Trigger: TGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTC...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGGTGGGGGCTGCTTGGTaGGGTGGCTCCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGVGAAW*GGSNFT
Trigger: AGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCAC...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCAGGCAATTTTCCTGTaGGTTCAGCTTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGQAIFL*VQLPGD
Trigger: GTCTCCGGGAAGCTGAACTCACAGGAAAATTGCCTG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTTGGGTAGTAGTGCTCTaGGCTCGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGWVVVL*ARVAGA
Trigger: TGCACCAGCCACTCGAGCTCAGAGCACTACTACCCA...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLGGAGV*QTAVLL
Trigger: AAGGAGCACAGCCGTCTGTCACACACCAGCTCCACC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPEEVLY*EPLSEE
Trigger: CTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTC...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTTCACTGGACGGTGTTaGGCTTCTCTGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGFTGRC*ASLALR
Trigger: CCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTGCTCTGAGCTCGAGTaGCTGGTGCAGGACGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLCSELE*LVQDEQ
Trigger: CTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGTGCGGTACTGAGAGCTaGGCTGGCTCTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KQAISYMYPTNPIGALNWCGTES*AGSGCA
Trigger: TGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCA...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTCGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: FKLGTSSPLKETGMCKESRCPRR*SWCVTD
Trigger: GTCTGTCACACACCAGCTCCACCTCCTCGGACAGCG...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp GTAAAACCTGTTTTACTTAAATCTCTGTCCTTACTGCCAGACTATCGTGATGGTGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACG +
Preference number: 4 (lower is better)
Translates to: VKPVLLKSLSLLPDYRDGGCLVG*LQFHWT
Trigger: CGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCC...ACCATCACGATAGTCTGGCAGTAAGGACAGAGATTTAAGTAAAACAGGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGCAGGCAATTTTCCTGTaGGTTCAGCTTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGQAIFL*VQLPGD
Trigger: GTCTCCGGGAAGCTGAACTCACAGGAAAATTGCCTG...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTGTCGTCCATGGGGTCTaGGCCATTGCTGCTACGAGT +
Preference number: 4 (lower is better)
Translates to: FKLGTSSPLKETGMCKESVVHGV*AIAATS
Trigger: ACTCGTAGCAGCAATGGCTCAGACCCCATGGACGAC...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCATGGGTAGTAGTGCTCTaGGCTCGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPWVVVL*ARVAGA
Trigger: TGCACCAGCCACTCGAGCTCAGAGCACTACTACCCA...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACCGTCTCATCTGTGAATaGTATTCCAAAGTACTCCTT +
Preference number: 4 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYRLICE*YSKVLL
Trigger: AAGGAGTACTTTGGAATAGCATTCACAGATGAGACG...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATCTGCAGCTTCTTCAGTaGATTCAAATAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYLQLLQ*IQIRGL
Trigger: AAGACCTCTTATTTGAATGCACTGAAGAAGCTGCAG...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTGTGCGCCACGAAGGTaGTCTGGGAAGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLCAPRR*SGKRCC
Trigger: ACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTCCTTCAGGGCTTGGGTaGGTAGCGCTGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FKLGTSSPLKETGMCKESPSGLG*VALAAF
Trigger: AAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGG...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLYSFLC*GSACGC
Trigger: GCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTACGAGCAGTCGTCCATaGGGTCTGAGCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLTSSRP*GLSHCC
Trigger: GCAGCAATGGCTCAGACCCCATGGACGACTGCTCGT...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTCTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LFISYLPSLVMSIVILGFLSSSG*CRTSSR
Trigger: ACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAG...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACG +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLGCLVG*LQFHWT
Trigger: CGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCTTTGTTCATCCAGCTTaGAGGCTGTTCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLFVHPA*RLFQFS
Trigger: GGAGAATTGGAACAGCCTTCAAGCTGGATGAACAAA...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTTATTTCCATCATCGATaGCAAGTGAAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGYFHHR*QVKPSG
Trigger: CCCAGAGGGCTTCACTTGTCATCGATGATGGAAATA...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGAGGTGTGCACGGCAATaGCACTGTGCCCAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: KQAISYMYPTNPIGALNWRCARQ*HCAQKS
Trigger: GGACTTTTGGGCACAGTGGCATTGCCGTGCACACCT...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTAGGTGTGCACGGCAATaGCACTGTGCCCAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FKLGTSSPLKETGMCKESRCARQ*HCAQKS
Trigger: GGACTTTTGGGCACAGTGGCATTGCCGTGCACACCT...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAAGGTGTGCACGGCAATaGCACTGTGCCCAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPRCARQ*HCAQKS
Trigger: GGACTTTTGGGCACAGTGGCATTGCCGTGCACACCT...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGCTGCAGCTTCTTCAGTaGATTCAAATAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGLQLLQ*IQIRGL
Trigger: AAGACCTCTTATTTGAATGCACTGAAGAAGCTGCAG...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGGAGCTGCTTACTCCTaGCTCGGTACAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLGAAYS*LGTASC
Trigger: ACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTTGTGCGCCACGAAGGTaGTCTGGGAAGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFISYLPSLVMSIVILGFCAPRR*SGKRCC
Trigger: ACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACA...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGTTGCTTCTCCAGTCTaGCAGGTCAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLVASPV*QVRMWW
Trigger: CCACCACATCCTGACCTGGCAGACTGGAGAAGCAAC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGGGTCAAGAAGCTCCTTaGCCAAAAGCTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGGQEAP*PKAWAV
Trigger: TACAGCCCAAGCTTTTGGCCAAGGAGCTTCTTGACC...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AATGTGTCTAATCTTTGGCAGCATAGAACCAACTGTGATCCTCTGATGCGTCTCTGTAGATGCAGGACTTaGCATTCAGGAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NVSNLWQHRTNCDPLMRLCRCRT*HSGRRA
Trigger: AGCTCTTCTTCCTGAATGCCAAGTCCTGCATCTACA...GAGACGCATCAGAGGATCACAGTTGGTTCTATGCTGCCAAAGATTAGACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTGAGAGCTGTCTTCGCTaGCGATATTTCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGESCLR*RYFHHR
Trigger: TCGATGATGGAAATATCGCCAGCGAAGACAGCTCTC...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
3UTR CAA 72 bp AGTGTGTTCCTCTTGGCCCCTCCTATCTGTTCATTGTaGAATGTGTCTAATCTTTGGCAGCATAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: SVFLLAPPICSL*NVSNLWQHRTN
Trigger: GTTGGTTCTATGCTGCCAAAGATTAGACACATTCAACAATGAACAGATAGGAGGGGCCAAGAGGAACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTATCATCGATGACAAGTaGAGCCCTCTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPIIDDK*SPLGGF
Trigger: AAACCCACCCAGAGGGCTTCACTTGTCATCGATGAT...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLPALSS*RSSVLG
Trigger: ACCCAGCACAGATGAACGCCAACTACTCAACGCTGG...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTGTACCACCACGGGTGTaGCACTGCCCTCGATATATA +
Preference number: 4 (lower is better)
Translates to: FKLGTSSPLKETGMCKESVPPRV*HCPRYI
Trigger: TATATATCGAGGGCAGTGCCACACCCGTGGTGGTAC...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGTCCTGCCCGTACCATTaGACATCAGCTAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KQAISYMYPTNPIGALNWSCPYH*TSASSG
Trigger: TCCAGAGCTAGCTGATGTCCAATGGTACGGGCAGGA...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091497.11
3UTR CAA 72 bp AAAAGTGTGTTCCTCTTGGCCCCTCCTATCTGTTCATaGTTGAATGTGTCTAATCTTTGGCAGCATAGAACC +
Preference number: 4 (lower is better)
Translates to: KSVFLLAPPICS*LNVSNLWQHRT
Trigger: GGTTCTATGCTGCCAAAGATTAGACACATTCAACAATGAACAGATAGGAGGGGCCAAGAGGAACACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGGTCCCGTCTCATCTGTaGATGCTATTCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGVPSHL*MLFQST
Trigger: AGTACTTTGGAATAGCATTCACAGATGAGACGGGAC...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CCA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGTGTAGATGCAGGACTTaGCATTCAGGAAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGCRCRT*HSGRRA
Trigger: AGCTCTTCTTCCTGAATGCCAAGTCCTGCATCTACA...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
3UTR CAA 72 bp GAATTGAAATTTCGCTGCAGAAAAAGTGTGTTCCTCTaGGCCCCTCCTATCTGTTCATTGTTGAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: ELKFRCRKSVFL*APPICSLLNVS
Trigger: AGACACATTCAACAATGAACAGATAGGAGGGGCCAAGAGGAACACACTTTTTCTGCAGCGAAATTTCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp TTGGCTTCACTTTATCATGGTAGTCATACTGGAAAATTCCTTTGTAGCTCAGTCGTCCCGTCTCATCTGTaGATGCTATTCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LASLYHGSHTGKFLCSSVVPSHL*MLFQST
Trigger: AGTACTTTGGAATAGCATTCACAGATGAGACGGGAC...GACTGAGCTACAAAGGAATTTTCCAGTATGACTACCATGATAAAGTGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR GCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTATGCCTAAAGTGCAGTaGAAGGCTGTGCAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LFISYLPSLVMSIVILGFMPKVQ*KAVQSR
Trigger: ACGAGACTGCACAGCCTTGCACTGCACTTTAGGCAT...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTGGCTTGGCTTTTTCCTaGCCGTACCATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: LFISYLPSLVMSIVILGFGLAFS*PYHWTS
Trigger: TGATGTCCAATGGTACGGGCAGGAAAAAGCCAAGCC...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091497.11
CDS-3UTR CCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCATGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPWLQFH*TVLSFS
Trigger: AGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCA...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp AACATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAGTCCCGTCTCATCTGTaGATGCTATTCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: NIVFWLKQAISYMYPTNPVPSHL*MLFQST
Trigger: AGTACTTTGGAATAGCATTCACAGATGAGACGGGAC...TGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTTTGTTCATCCAGCTTaGAGGCTGTTCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLFVHPA*RLFQFS
Trigger: GGAGAATTGGAACAGCCTTCAAGCTGGATGAACAAA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR TCA 90 bp CTGTTCATTTCTTACCTTCCCAGTCTGGTAATGTCTATTGTTATTCTTGGATTTACTCAGACCCATCCATaGTGGGAGAGTTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LFISYLPSLVMSIVILGFTQTHP*WESFLL
Trigger: CAACAGAAAACTCTCCCATCATGGATGGGTCTGAGT...AAATCCAAGAATAACAATAGACATTACCAGACTGGGAAGGTAAGAAATGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR GCA 90 bp TCTTCCTTGGCTTCACTTTATCATGGTAGTCATACTGGAAAATTCCTTTGTAGCCGTCTCATCTGTGAATaGTATTCCAAAGTACTCCTT +
Preference number: 4 (lower is better)
Translates to: SSLASLYHGSHTGKFLCSRLICE*YSKVLL
Trigger: AAGGAGTACTTTGGAATAGCATTCACAGATGAGACG...GCTACAAAGGAATTTTCCAGTATGACTACCATGATAAAGTGAAGCCAAGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CCA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTTATTCATCAGTACTTTaGTGTGTTGGAGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPYSSVL*CVGDSD
Trigger: GTCTGAGTCTCCAACACACCAAAGTACTGATGAATA...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS TCA 90 bp AGCCCCGCTGCGGGCCGCCAGGTTGGGCATGCTGCCAGAGCTGGCTaGGCCCAGGGCGCCTGCTGCCCGCTGCCTCTGCCGCTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: SPAAGRQVGHAARAG*AQGACCPLPLPLSL
Trigger: CAGCGACAGCGGCAGAGGCAGCGGGCAGCAGGCGCCCTGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAGCGGGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TTGCAGCCCCGCTGCGGGCCGCCAGGTTGGGCATGCTGCCAGAGCTaGCTGAGCCCAGGGCGCCTGCTGCCCGCTGCCTCTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LQPRCGPPGWACCQS*LSPGRLLPAASAAV
Trigger: GACAGCGGCAGAGGCAGCGGGCAGCAGGCGCCCTGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp GCTGGGCTGGCTCTGGCTGTGCAGGTACACGCCACCTCCAGTGCTTaGAGCCCCGCTGCGGGCCGCCAGGTTGGGCATGCTGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: AGLALAVQVHATSSA*SPAAGRQVGHAARA
Trigger: AGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp TCTGGCTGTGCAGGTACACGCCACCTCCAGTGCTTGCAGCCCCGCTaGGGGCCGCCAGGTTGGGCATGCTGCCAGAGCTGGCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SGCAGTRHLQCLQPR*GPPGWACCQSWLSP
Trigger: TGGGCTCAGCCAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGTACCTGCACAGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp TTGTCGTGGGCGCCGTCACGCCCCAACGAAGGAGTCCGCAGGATCTaGGACCGAGATGGTGTAAGGCGGCCTGCATCCCCCTCGTCGCCA +
Preference number: 5 (lower is better)
Translates to: LSWAPSRPNEGVRRI*DRDGVRRPASPSSP
Trigger: TGGCGACGAGGGGGATGCAGGCCGCCTTACACCATCTCGGTCTCAGATCCTGCGGACTCCTTCGTTGGGGCGTGACGGCGCCCACGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp GAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGTGACAGACGGCTGTaGTCCTTATGCGAGGCTGTGGAGCGCTGGTACCACTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: EPLSEEVELVCDRRL*SLCEAVERWYHWRS
Trigger: GCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp AGACGGCTGTGCTCCTTATGCGAGGCTGTGGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACGGCGGCACGGCCGGAGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: RRLCSLCEAVERWYH*RSSSDTAARPEPLS
Trigger: CGACAAAGGCTCCGGCCGTGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp GTGTGTGACAGACGGCTGTGCTCCTTATGCGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCATCAGACACGGCGGCACGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: VCDRRLCSLCEAVER*YHWRSSSDTAARPE
Trigger: CTCCGGCCGTGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGCCAGCCGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGC +
Preference number: 5 (lower is better)
Translates to: RPAEPPSSSLSRWVCSQLARPEP*SWAPSR
Trigger: GCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGC...GAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCGGCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp CGAAGGAGTCCGCAGGATCTGAGACCGAGATGGTGTAAGGCGGCCTaGATCCCCCTCGTCGCCACCCCCGCGCCAGCTCTCTTTGAACAG +
Preference number: 5 (lower is better)
Translates to: RRSPQDLRPRWCKAA*IPLVATPAPALFEQ
Trigger: CTGTTCAAAGAGAGCTGGCGCGGGGGTGGCGACGAGGGGGATGCAGGCCGCCTTACACCATCTCGGTCTCAGATCCTGCGGACTCCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTCTGCGGGCCGCCAGGTaGGGCATGCTGCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFLRAAR*GMLPEL
Trigger: CAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAG...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTCGCCACCTCCAGTGCTaGCAGCCCCGCTGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: RASFIFTVPLGLFPALRSRHLQC*QPRCGP
Trigger: CGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCG...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCCGCGCCAGCTCTCTTaGAACAGGCCGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGVWALWELSCCNSALPAPRQLS*NRPPAV
Trigger: CACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCGG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAAGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGC +
Preference number: 5 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQARPEP*SWAPSR
Trigger: GCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGC...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGC +
Preference number: 5 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGARPEP*SWAPSR
Trigger: GCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGC...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp ACCCTGCTGTGCGCCACGAAGGTGCTCTGGGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGTGACAGACGG +
Preference number: 5 (lower is better)
Translates to: TLLCATKVLWEEVLY*EPLSEEVELVCDRR
Trigger: CCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACAGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGGAGCTGGTGTGTGACAGACGGCTGTGCTCCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGCGCAGCTCATCAGACACGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: WSWCVTDGCAPYARL*SAGTTGAAHQTRRH
Trigger: GTGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTGCGGGCCGCCAGGTaGGGCATGCTGCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGLRAAR*GMLPEL
Trigger: CAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAG...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACGCCACCTCCAGTGCTaGCAGCCCCGCTGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: HDKVTPASHTTSTETLVPRHLQC*QPRCGP
Trigger: CGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp GGTGCTGTACTGAGAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTTATGCGAGGCTGTGGAGCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: GAVLRAAVRGGGAGV*QTAVLLMRGCGALV
Trigger: TACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp GAGGTAAGGCAGCTGACGTGGCCTTGCACATCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGAAGGTGCTCTGGGAAGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVRQLTWPCTSGASW*PCCAPRRCSGKRCC
Trigger: ACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp TCCGAGGAGGTGGAGCTGGTGTGTGACAGACGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGGTACCACTGGCGCAGCTCATCAGAC +
Preference number: 5 (lower is better)
Translates to: SEEVELVCDRRLCSL*EAVERWYHWRSSSD
Trigger: GTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp AAGTCGGGGCTTCCGGTGTCGTTCTCCGAGCCCAGGAGCTTGCCCTaGGACTCCAGGCTGGAGCTTCGATGCCTAAAGTGCAGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: KSGLPVSFSEPRSLP*DSRLELRCLKCSAR
Trigger: CCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCTGGAGTCCCAGGGCAAGCTCCTGGGCTCGGAGAACGACACCGGAAGCCCCGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp GCTGCCGCGCCTTGGACGGCGAGTCCTCAGCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGTAGTAGTGCTCTGAGCTCGAGTGGC +
Preference number: 5 (lower is better)
Translates to: AAAPWTASPQPALSS*RSSVLGSSALSSSG
Trigger: GCCACTCGAGCTCAGAGCACTACTACCCAGCACAGATGAACGCCAACTACTCAACGCTGGCTGAGGACTCGCCGTCCAAGGCGCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAAGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: ALWAREPGDTQWVRNLPEVLGKR*WLLEWP
Trigger: CGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCAC...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: RWCIEVTDTAGGVWALWEVLGKR*WLLEWP
Trigger: CGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCAC...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTCCGCGCCAGCTCTCTTaGAACAGGCCGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFPRQLS*NRPPAV
Trigger: CACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCGG...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp TGTTCTGCAAGGAGCTGCTTACTCCTGCCTCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGCTGCTGGAATGGCCGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CSARSCLLLPRYSFL*WGSACGCWNGRGRS
Trigger: GCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TCTGCAAGGAGCTGCTTACTCCTGCCTCGGTACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGCTGGAATGGCCGTGGGAGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: SARSCLLLPRYSFLC*GSACGCWNGRGRSV
Trigger: AACGCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGCTCTGGGAAGAGGTGCTGTACTGAGAGCCGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGACGGCTGTGCTCCTTATGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CSGKRCCTESRCPRR*SWCVTDGCAPYARL
Trigger: CAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTCCCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCACCGGCCCAGACTTTTaGGGGAAGTCATGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGVWALWELSCCNSALPATGPDF*GKSCSR
Trigger: CCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGGT...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAACGAGGAGGGAGTCCCTaGTGTGGCGACTGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGLGPLGAELLQLCSACQRGGSP*CGDCKG
Trigger: CCCCTTACAGTCGCCACACAAGGGACTCCCTCCTCG...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGACTGCGGGCCGCCAGGTaGGGCATGCTGCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: DGNHQGAIEDCCLALWARLRAAR*GMLPEL
Trigger: CAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAG...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCCGCGCCAGCTCTCTTaGAACAGGCCGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FVPSSQECSRRRVTTGRGPRQLS*NRPPAV
Trigger: CACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCGG...ACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp TTGGGGTCACTGGCTAGACGGCGGGCGGCCTCTGTGATCTGGGACTaGATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LGSLARRRAASVIWD*IANSRSRRSSSASS
Trigger: AGAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACAGAGGCCGCCCGCCGTCTAGCCAGTGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGGGGACTCCGGACGCGCAGGTCTGGGGTGGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGGCTTCGGATGGGACTGTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: WGLRTRRSGVDGMLD*EFQCGRLRMGLFCK
Trigger: CTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGGAGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp AGTGCTCTGAGCTCGAGTGGCTGGTGCAGGACGAGCAGTCGTCCATaGGGTCTGAGCCATTGCTGCTACGAGTCCTCGGGGTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: SALSSSGWCRTSSRP*GLSHCCYESSGCRS
Trigger: ACTTCTACACCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGGCGTTCATCTGTGCTGGGTAGTAGTGCTCTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGTCCATGGGGTCTGAGCCATTGCTGC +
Preference number: 5 (lower is better)
Translates to: WRSSVLGSSALSSSG*CRTSSRPWGLSHCC
Trigger: GCAGCAATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACTACTACCCAGCACAGATGAACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAAATGGGGTCTGAGCCATaGCTGCTACGAGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: ALWAREPGDTQWVRNLPEMGSEP*LLRVLG
Trigger: CCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCAT...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTCGCCACCTCCAGTGCTaGCAGCCCCGCTGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSRHLQC*QPRCGP
Trigger: CGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCG...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp GTGGCACTGCCCTCGATATATAGTGGGTACTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGGCTGTGCAGGTACACGCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: VALPSIYSGYSLMRY*ELGWLWLCRYTPPP
Trigger: TGGAGGTGGCGTGTACCTGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGAGTACCCACTATATATCGAGGGCAGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp CCACCACGGGTGTGGCACTGCCCTCGATATATAGTGGGTACTCCTTaGTGCGGTACTGAGAGCTGGGCTGGCTCTGGCTGTGCAGGTACA +
Preference number: 5 (lower is better)
Translates to: PPRVWHCPRYIVGTP*CGTESWAGSGCAGT
Trigger: TGTACCTGCACAGCCAGAGCCAGCCCAGCTCTCAGTACCGCATCAAGGAGTACCCACTATATATCGAGGGCAGTGCCACACCCGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp CGTTCATCTGTGCTGGGTAGTAGTGCTCTGAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCATGGGGTCTGAGCCATTGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: RSSVLGSSALSSSGW*RTSSRPWGLSHCCY
Trigger: GTAGCAGCAATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACTACTACCCAGCACAGATGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp GGAATGAACATAGTGGGGACTCCGGACGCGCAGGTCTGGGGTGGATaGCATGCTAGACTGGGAATTCCAATGTGGGAGGCTTCGGATGGG +
Preference number: 5 (lower is better)
Translates to: GMNIVGTPDAQVWGG*HARLGIPMWEASDG
Trigger: CCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGGAGTCCCCACTATGTTCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp CTCCAGTCTGCCAGGTCAGGATGTGGTGGGGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACGGTGTTGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LQSARSGCGGGCLVG*LQFHWTVLSFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCACCACATCCTGACCTGGCAGACTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS CCA 90 bp TCCCAGTCTGCCAGGTCAGGATGTGGTGGGGGCTGCTTGGTGGGGTaGCTCCAATTTCACTGGACGGTGTTGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SQSARSGCGGGCLVG*LQFHWTVLSFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCACCACATCCTGACCTGGCAGACTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
CDS-3UTR CAA 90 bp GTGGACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCAGGTCAAGAAGCTCCTaGGCCAAAAGCTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: VDGGGVSRSQILLEGSGPRSRSS*AKSLGC
Trigger: ACAGCCCAAGCTTTTGGCCAAGGAGCTTCTTGACCT...GGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGACCATGTTGGCCAGCTTaGAGGTCTTCAGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRPCWPA*RSSGSL
Trigger: CAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGG...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTCCGCGCCAGCTCTCTTaGAACAGGCCGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGPRQLS*NRPPAV
Trigger: CACAGCTGGCGGCCTGTTCAAAGAGAGCTGGCGCGG...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: AFFPPWLLVLDVFPTGSHAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...ATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: ASFIFTVPLGLFPALRSATRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091497.11
ENSMUST00000176828.8
CDS TCA 90 bp GCTCCCGCTGATGATCTTCCCCTTGCTCCCCATGTTGGCCAGCTTTaGGGTCTTCAGGGTCCCTGTTTCCGTCAGGTCAATGGCGATCTC +
Preference number: 5 (lower is better)
Translates to: APADDLPLAPHVGQL*GLQGPCFRQVNGDL
Trigger: GAGATCGCCATTGACCTGACGGAAACAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 90 bp GCGCAGGTCTGGGGTGGATGGCATGCTAGACTGGGAATTCCAATGTaGGAGGCTTCGGATGGGACTGTTCTGCAAGGAGCTGCTTACTCC +
Preference number: 5 (lower is better)
Translates to: AQVWGGWHARLGIPM*EASDGTVLQGAAYS
Trigger: GGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TCAGGATGTGGTGGGGGCTGCTTGGTGGGGTGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCTGGCTTTGAGGTAAGGCAGCTGACG +
Preference number: 5 (lower is better)
Translates to: SGCGGGCLVGWLQFH*TVLSFSGFEVRQLT
Trigger: CGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCACCACATCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GHRYCWRGLGPLGAELLQPLLPM*ASFEVF
Trigger: GAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGG...TTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAATGTCTCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGKRARGHTVGSEPSRMSLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAG...AGACATTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCGAGGAGGGAGTCCCTaGTGTGGCGACTGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKRGGSP*CGDCKG
Trigger: CCCCTTACAGTCGCCACACAAGGGACTCCCTCCTCG...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGACGAGGAGGGAGTCCCTaGTGTGGCGACTGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: DGNHQGAIEDCCLALWARRGGSP*CGDCKG
Trigger: CCCCTTACAGTCGCCACACAAGGGACTCCCTCCTCG...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCGAGGAGGGAGTCCCTaGTGTGGCGACTGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESRGGSP*CGDCKG
Trigger: CCCCTTACAGTCGCCACACAAGGGACTCCCTCCTCG...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCAGGGGGAGGAGGCCTGTaGTGTGATGAAGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: HDKVTPASHTTSTETLVPGGGGL*CDEGGR
Trigger: TCGGCCACCTTCATCACACAACAGGCCTCCTCCCCC...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTGGGGGAGGAGGCCTGTaGTGTGATGAAGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: PIGWQPETASVSAGRASFGGGGL*CDEGGR
Trigger: TCGGCCACCTTCATCACACAACAGGCCTCCTCCCCC...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTGGGGGAGGAGGCCTGTaGTGTGATGAAGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPGGGGL*CDEGGR
Trigger: TCGGCCACCTTCATCACACAACAGGCCTCCTCCCCC...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: DGNHQGAIEDCCLALWARAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...TCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp AATTCCAATGTGGGAGGCTTCGGATGGGACTGTTCTGCAAGGAGCTaGTTACTCCTGCCTCGGTACAGCTTCCTGTGCTGGGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: NSNVGGFGWDCSARS*LLLPRYSFLCWGSA
Trigger: AGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGGCCAGCTTTGAGGTCTTCAGGGTCCCTGTTTCCGTCAGGTCAATaGCGATCTCGCTCAGACTTCGGGCCGCATGGATCTTGGACTTAC +
Preference number: 5 (lower is better)
Translates to: WPALRSSGSLFPSGQ*RSRSDFGPHGSWTY
Trigger: GTAAGTCCAAGATCCATGCGGCCCGAAGTCTGAGCGAGATCGCCATTGACCTGACGGAAACAGGGACCCTGAAGACCTCAAAGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 90 bp AGTTCAGCTTCCCGGAGACACAATCTCTTCAGTTCCTCCAGCCTCTaGCGCAGCGTCTCCTCCAGAGCTTCCTGCCTGGATTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SSASRRHNLFSSSSL*RSVSSRASCLDFKA
Trigger: TGCCTTGAAATCCAGGCAGGAAGCTCTGGAGGAGACGCTGCGCCAGAGGCTGGAGGAACTGAAGAGATTGTGTCTCCGGGAAGCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTCACGACAGGACGTGGTCTAAGAAGTGAACACCGTAGGTaGGCAGAGACTCCACGATAC +
Preference number: 5 (lower is better)
Translates to: PSSQECSRRRVTTGRGLRSEHRR*AETPRY
Trigger: GTATCGTGGAGTCTCTGCCAACCTACGGTGTTCACT...TCTTAGACCACGTCCTGTCGTGACCCTTCTCCTGGAGCACTCCTGAGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAAGTGAACACCGTAGGTaGGCAGAGACTCCACGATAC +
Preference number: 5 (lower is better)
Translates to: RGLGPLGAELLQLCSACQSEHRR*AETPRY
Trigger: GTATCGTGGAGTCTCTGCCAACCTACGGTGTTCACT...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTATCGCCCAAATGGACTaGATCAATGCCGGACACGCA +
Preference number: 5 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFIAQMD*INAGHA
Trigger: TGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGAT...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SGTESQTLVPGVPAQLPSPLLPM*ASFEVF
Trigger: GAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGG...GGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CAA 90 bp TCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SGTESQTLVPGVPAQLPSLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAG...GGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCGGTTTCTTCCCTGACTaGATGCGGTTCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: GGVWALWELSCCNSALPAGFFPD*MRFSLI
Trigger: AATCAACGAGAACCGCATCAAGTCAGGGAAGAAACC...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAATGGGGTCTGAGCCATaGCTGCTACGAGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: RFAFFPPWLLVLDVFPTGMGSEP*LLRVLG
Trigger: CCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCAT...TCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTATGGGGTCTGAGCCATaGCTGCTACGAGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVMGSEP*LLRVLG
Trigger: CCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCAT...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTATGGGGTCTGAGCCATaGCTGCTACGAGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPMGSEP*LLRVLG
Trigger: CCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCAT...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCT +
Preference number: 5 (lower is better)
Translates to: RGLGPLGAELLQLCSACQSPQPA*SSWRSS
Trigger: AGATGAACGCCAACTACTCAACGCTGGCTGAGGACT...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTCTCTGGGCAAGAGAGCCAGGGGACACACAGTGGGTTCGGAACCTTCCAGAAAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCT +
Preference number: 5 (lower is better)
Translates to: ALWAREPGDTQWVRNLPESPQPA*SSWRSS
Trigger: AGATGAACGCCAACTACTCAACGCTGGCTGAGGACT...TTCTGGAAGGTTCCGAACCCACTGTGTGTCCCCTGGCTCTCTTGCCCAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp CTAGACTGGGAATTCCAATGTGGGAGGCTTCGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCTGCCTCGGTACAGCTTCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LDWEFQCGRLRMGLF*KELLTPASVQLPVL
Trigger: CAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TGTCTTCACAGTAGGCCAGGGAGGGGTGTTCCTTCAGGGCTTGGGTaGGTAGCGCTGGCAGCTTTTTCAGATCACTTCTCACCACCTCAT +
Preference number: 5 (lower is better)
Translates to: CLHSRPGRGVPSGLG*VALAAFSDHFSPPH
Trigger: ATGAGGTGGTGAGAAGTGATCTGAAAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGGAACACCCCTCCCTGGCCTACTGTGAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACATCGCCCAAATGGACTaGATCAATGCCGGACACGCA +
Preference number: 5 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHIAQMD*INAGHA
Trigger: TGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGAT...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACCATGTTGGCCAGCTTaGAGGTCTTCAGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HDKVTPASHTTSTETLVPPCWPA*RSSGSL
Trigger: CAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGTGATCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCCATGTTGGCCAGCTTaGAGGTCTTCAGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CDLGLNRKLSFQAFQLSFPCWPA*RSSGSL
Trigger: CAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGG...GAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CAA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVPLLPM*ASFEVF
Trigger: GAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGG...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PIGWQPETASVSAGRASFPLLPM*ASFEVF
Trigger: GAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGG...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TVCGLGIMADGNHQGAIEPLLPM*ASFEVF
Trigger: GAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGG...CTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PIGWQPETASVSAGRASFLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAG...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CATGACAAGGTAACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCACTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HDKVTPASHTTSTETLVPLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAG...TGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGTTACCTTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSVLGKR*WLLEWP
Trigger: CGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCAC...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACTGGGAGAGTTTTCTGTaGCTTCTCCAGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHWESFL*LLQSAR
Trigger: CCTGGCAGACTGGAGAAGCAACAGAAAACTCTCCCA...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCTTTCCTGACAGTTTGTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTCGGCCCTCCGTCATCTaGGTTCTCATCGGAGATAGG +
Preference number: 5 (lower is better)
Translates to: AFLTVCGLGIMADGNHQGRPSVI*VLIGDR
Trigger: CCTATCTCCGATGAGAACCAAGATGACGGAGGGCCG...ACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCACAAACTGTCAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091497.11
CDS-3UTR CAA 90 bp GGTGTTCCTTCAGGGCTTGGGTGGGTAGCGCTGGCAGCTTTTTCAGATCACTTCATCAAGGAGATGTACTaGACATCGACGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: GVPSGLGWVALAAFSDHFIKEMY*TSTALR
Trigger: ACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGAT...GAAGTGATCTGAAAAAGCTGCCAGCGCTACCCACCCAAGCCCTGAAGGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCTTCTCACCACCTCATaGCTAGAGAAATCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GGVWALWELSCCNSALPALLTTS*LEKSPF
Trigger: AAAAGGAGATTTCTCTAGCAATGAGGTGGTGAGAAG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TCCTCCCATGTCCAGACAGATAGAGTCCGAGTCTGCCAGGCCAGCCGAGCCTCCCTCCAACTGTCTCCATaGAAATATCTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SSHVQTDRVRVCQASRASLQLSP*KYLPWL
Trigger: AAGCCAAGGAAGATATTTCAATGGAGACAGTTGGAG...GGAGGCTCGGCTGGCCTGGCAGACTCGGACTCTATCTGTCTGGACATGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GGAGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCCTCCAACTGTCTCCATaGAAATATCTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: GGVWALWELSCCNSALPALQLSP*KYLPWL
Trigger: AAGCCAAGGAAGATATTTCAATGGAGACAGTTGGAG...GGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTGGCTATGGTCACCGTTGGCTTCCTCCCCATCCCAAAAGGAAGGAAGCTTTGCCATGTTGGCCAGCTTaGAGGTCTTCAGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FGYGHRWLPPHPKRKEALPCWPA*RSSGSL
Trigger: CAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGG...CAAAGCTTCCTTCCTTTTGGGATGGGGAGGAAGCCAACGGTGACCATAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VSWQTETTKVPLRIVVWLLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAG...GAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGGCCGGCCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTTTAGGCAGGATTTTTaGTTCATCCAGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RPAYRVAARNSFSICRQGFRQDF*FIQLEG
Trigger: GCCTTCAAGCTGGATGAACAAAAAATCCTGCCTAAA...GCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGGCCGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAAGGTTTCTTCCCTGACTaGATGCGGTTCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: RGLGPLGAELLQLCSACQGFFPD*MRFSLI
Trigger: AATCAACGAGAACCGCATCAAGTCAGGGAAGAAACC...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGGGTTTCTTCCCTGACTaGATGCGGTTCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQGFFPD*MRFSLI
Trigger: AATCAACGAGAACCGCATCAAGTCAGGGAAGAAACC...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCCAGGAGAAGGGTGACTCGCTCCACATTTaGGGCTTTAAGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: SLSRWVCSQLSGVLQEKGDSLHI*GFKGDL
Trigger: CAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTC...ACCCTTCTCCTGGAGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGTCTGTCCGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTCTGCGGGCCGCCAGGTaGGGCATGCTGCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: RSVRVHTSVNKHKMNHNGLRAAR*GMLPEL
Trigger: CAGCTCTGGCAGCATGCCCAACCTGGCGGCCCGCAG...ACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCGGACAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 90 bp AGTCCCTTGTGTGGCGACTGTAAGGGGGATATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGAACGAGGGCATCCGAGAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPLCGDCKGDIVLVT*ESSSSRTRASEREL
Trigger: CAGCTCTCTCTCGGATGCCCTCGTTCTGGAAGATGAAGACTCTCAGGTTACCAGCACAATATCCCCCTTACAGTCGCCACACAAGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp CCAGAGCTTCCTGCCTGGATTTCAAGGCAGCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTGATTCCTGAGAACCTGAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PELPAWISRQPTCLS*PTASYLIPENLRTA
Trigger: TGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGGCTGCCTTGAAATCCAGGCAGGAAGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCTATAGGGTGGCAGCCAGAAACAGCTTCAGTATCTGCAGGCAGGGCTAGCTTTATCGCCCAAATGGACTaGATCAATGCCGGACACGCA +
Preference number: 5 (lower is better)
Translates to: PIGWQPETASVSAGRASFIAQMD*INAGHA
Trigger: TGCGTGTCCGGCATTGATCAAGTCCATTTGGGCGAT...AAAGCTAGCCCTGCCTGCAGATACTGAAGCTGTTTCTGGCTGCCACCCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGGGTCTGGGCCCTTTGGGAGCTGAGTTGTTGCAACTCTGCTCTGCCTGCCAATGCTTCTTCAGTTTTTaGCTGACATTGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: RGLGPLGAELLQLCSACQCFFSF*LTLGSL
Trigger: CAGTGACCCCAATGTCAGCAAAAAACTGAAGAAGCA...TTGGCAGGCAGAGCAGAGTTGCAACAACTCAGCTCCCAAAGGGCCCAGACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTGGGAGTGCTTCTTCAGTTTTTaGCTGACATTGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: RWCIEVTDTAGGVWALWECFFSF*LTLGSL
Trigger: CAGTGACCCCAATGTCAGCAAAAAACTGAAGAAGCA...CTCCCAAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ACCCCTGCAAGCCACACTACCTCCACAGAGACTCTTGTGCCATCGTTAGTGCCAGACTCGCTCCACATTTaGGGCTTTAAGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: TPASHTTSTETLVPSLVPDSLHI*GFKGDL
Trigger: CAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTC...TGGCACTAACGATGGCACAAGAGTCTCTGTGGAGGTAGTGTGGCTTGCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTCGCCACCTCCAGTGCTaGCAGCCCCGCTGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLRHLQC*QPRCGP
Trigger: CGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCG...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 90 bp CTTGACATCGACGGCCCTCCGTCATCTGGTAGACAGCATTGGGGATaGACCACGGTTTTAACATCAGCTGCAGACGATGTAGGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LDIDGPPSSGRQHWG*TTVLTSAADDVGFL
Trigger: AAGGAAACCTACATCGTCTGCAGCTGATGTTAAAACCGTGGTGCATCCCCAATGCTGTCTACCAGATGACGGAGGGCCGTCGATGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000175944.8
CDS CCA 90 bp GATGTACTTGACATCGACGGCCCTCCGTCATCTGGTAGACAGCATTaGGGATGCACCACGGTTTTAACATCAGCTGCAGACGATGTAGGT +
Preference number: 5 (lower is better)
Translates to: DVLDIDGPPSSGRQH*GCTTVLTSAADDVG
Trigger: ACCTACATCGTCTGCAGCTGATGTTAAAACCGTGGTGCATCCCCAATGCTGTCTACCAGATGACGGAGGGCCGTCGATGTCAAGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175944.8
CDS-3UTR CAA 90 bp AACACCGTAGGTTGGCAGAGACTCCACGATACTCATGTAGTTCACGATTGCTTGACCGGCCCAGACTTTTaGGGGAAGTCATGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NTVGWQRLHDTHVVHDCLTGPDF*GKSCSR
Trigger: CCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGGT...CAAGCAATCGTGAACTACATGAGTATCGTGGAGTCTCTGCCAACCTACGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176803.8
CDS-3UTR CAA 90 bp GACGGAGGTGGTGTATCGAGGTCACAGATACTGCTGGAGGGGTCTGGGCCCTTTCTTCTCACCACCTCATaGCTAGAGAAATCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DGGGVSRSQILLEGSGPFLLTTS*LEKSPF
Trigger: AAAAGGAGATTTCTCTAGCAATGAGGTGGTGAGAAG...AAAGGGCCCAGACCCCTCCAGCAGTATCTGTGACCTCGATACACCACCTCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGCTCCAACTGTCTCCATaGAAATATCTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQLQLSP*KYLPWL
Trigger: AAGCCAAGGAAGATATTTCAATGGAGACAGTTGGAG...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATATCCCCTGAGCACTCTCCTCTAGAAGCACTCGGCCGGCCTATAGGGTGGCAGTTTTGTTCATCCAGCTaGAAGGCTGTTCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: ISPEHSPLEALGRPIGWQFCSSS*KAVPIL
Trigger: GAGAATTGGAACAGCCTTCAAGCTGGATGAACAAAA...CTGCCACCCTATAGGCCGGCCGAGTGCTTCTAGAGGAGAGTGCTCAGGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGC +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLARPEP*SWAPSR
Trigger: GCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTTTTCACTGGACGGTGTaGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVFHWTV*SFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAA...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp CCAGACTTTTTGGGGAAGTCATGCTCCAGGACTCTCCGATCGAGCTaGAGCCAATTCAAGTGTCCCGTCTCATCTGTGAATGCTATTCCA +
Preference number: 5 (lower is better)
Translates to: PDFLGKSCSRTLRSS*SQFKCPVSSVNAIP
Trigger: TGGAATAGCATTCACAGATGAGACGGGACACTTGAATTGGCTCCAGCTCGATCGGAGAGTCCTGGAGCATGACTTCCCCAAAAAGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000115037.9
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176803.8
ENSMUST00000177457.8
CDS CCA 90 bp GAAGGCTGTTCCAATTCTCCTCCGAACAATAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCACAGGCAATTTTCCTGTGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EGCSNSPPNNRWFLA*IQGIFHRQFSCEFS
Trigger: GCTGAACTCACAGGAAAATTGCCTGTGGAATATCCCCTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGGAGAATTGGAACAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCCAGGGGACACACTTTTGTTCATCCAGCTaGAAGGCTGTTCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: VPLRIVVWLSGQESQGTHFCSSS*KAVPIL
Trigger: GAGAATTGGAACAGCCTTCAAGCTGGATGAACAAAA...GTGTGTCCCCTGGCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTTGCTTCTTCAGTTTTTaGCTGACATTGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: ASFIFTVPLGLFPALRSACFFSF*LTLGSL
Trigger: CAGTGACCCCAATGTCAGCAAAAAACTGAAGAAGCA...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GTGGCCTGGGTATCATGGCAGACGGAAACCACCAAGGTGCCATTGAGGATTGTTGGTTTCTTCCCTGACTaGATGCGGTTCTCGTTGATT +
Preference number: 5 (lower is better)
Translates to: VAWVSWQTETTKVPLRIVGFFPD*MRFSLI
Trigger: AATCAACGAGAACCGCATCAAGTCAGGGAAGAAACC...AACAATCCTCAATGGCACCTTGGTGGTTTCCGTCTGCCATGATACCCAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATCGTGATGGTGTTCACAGCTCCCATTCCGTTTCCCTCTGCTCCCCAAATCTATAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCT +
Preference number: 5 (lower is better)
Translates to: IVMVFTAPIPFPSAPQIYSPQPA*SSWRSS
Trigger: AGATGAACGCCAACTACTCAACGCTGGCTGAGGACT...ATAGATTTGGGGAGCAGAGGGAAACGGAATGGGAGCTGTGAACACCATCACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS CCA 90 bp TTCATCCAGCTTGAAGGCTGTTCCAATTCTCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAGGGGATATTCCACAGGCAATTTTCC +
Preference number: 5 (lower is better)
Translates to: FIQLEGCSNSPPNNR*FLAWIQGIFHRQFS
Trigger: GGAAAATTGCCTGTGGAATATCCCCTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGGAGAATTGGAACAGCCTTCAAGCTGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 90 bp TCTTCGCTGGCGATATTTCCATCATCGATGACAAGTGAAGCCCTCTaGGTGGGTTTCTTCCCTGACTTGATGCGGTTCTCGTTGATTGCA +
Preference number: 5 (lower is better)
Translates to: SSLAIFPSSMTSEAL*VGFFPDLMRFSLIA
Trigger: TGCAATCAACGAGAACCGCATCAAGTCAGGGAAGAAACCCACCCAGAGGGCTTCACTTGTCATCGATGATGGAAATATCGCCAGCGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTATCAAGGAGATGTACTaGACATCGACGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSIKEMY*TSTALR
Trigger: ACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGAT...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTCTTCTCACCACCTCATaGCTAGAGAAATCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: RASFIFTVPLGLFPALRSLLTTS*LEKSPF
Trigger: AAAAGGAGATTTCTCTAGCAATGAGGTGGTGAGAAG...ACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGAGTGAACACCGTAGGTaGGCAGAGACTCCACGATAC +
Preference number: 5 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGSEHRR*AETPRY
Trigger: GTATCGTGGAGTCTCTGCCAACCTACGGTGTTCACT...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTTTTTGTTCATCCAGCTaGAAGGCTGTTCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: ASFIFTVPLGLFPALRSAFCSSS*KAVPIL
Trigger: GAGAATTGGAACAGCCTTCAAGCTGGATGAACAAAA...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTTCCTTTTTGTTCATCCAGCTaGAAGGCTGTTCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: LGLNRKLSFQAFQLSFLPFCSSS*KAVPIL
Trigger: GAGAATTGGAACAGCCTTCAAGCTGGATGAACAAAA...AGGAAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CAA 90 bp TCTGCCTGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACTTTCACTGGACGGTGTaGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SACQLVDVCKKSSYLRAYFHWTV*SFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAA...GTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GCCTCCTTCATCTTCACTGTCCCGTTGGGTTTGTTCCCAGCTCTCAGGAGTGCTCTATTCATCAGTACTTaGGTGTGTTGGAGACTCAGA +
Preference number: 5 (lower is better)
Translates to: ASFIFTVPLGLFPALRSALFIST*VCWRLR
Trigger: TCTGAGTCTCCAACACACCAAAGTACTGATGAATAG...AGCACTCCTGAGAGCTGGGAACAAACCCAACGGGACAGTGAAGATGAAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCTTTTGTTCATCCAGCTaGAAGGCTGTTCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESFCSSS*KAVPIL
Trigger: GAGAATTGGAACAGCCTTCAAGCTGGATGAACAAAA...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGTCATGACAAGGTAACCCCTTTTAGGCAGGATTTTTaGTTCATCCAGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: WLLVLDVFPTGSHDKVTPFRQDF*FIQLEG
Trigger: GCCTTCAAGCTGGATGAACAAAAAATCCTGCCTAAA...AGGGGTTACCTTGTCATGACTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGTGATCTGGGACTGAATCGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCTTTAGGCAGGATTTTTaGTTCATCCAGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: CDLGLNRKLSFQAFQLSFFRQDF*FIQLEG
Trigger: GCCTTCAAGCTGGATGAACAAAAAATCCTGCCTAAA...GAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCGATTCAGTCCCAGATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176864.3
CDS-3UTR CAA 90 bp GAAACCACCAAGGTGCCATTGAGGATTGTTGTCTGGCTCTCTGGGCAAGAGAGCTTTAGGCAGGATTTTTaGTTCATCCAGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: ETTKVPLRIVVWLSGQESFRQDF*FIQLEG
Trigger: GCCTTCAAGCTGGATGAACAAAAAATCCTGCCTAAA...GCTCTCTTGCCCAGAGAGCCAGACAACAATCCTCAATGGCACCTTGGTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TGCCAACTGGTAGACGTGTGTAAAAAGTCTTCCTACCTAAGGGCGTACGTGAGTGACTCGCTCCACATTTaGGGCTTTAAGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: CQLVDVCKKSSYLRAYVSDSLHI*GFKGDL
Trigger: CAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTC...ACTCACGTACGCCCTTAGGTAGGAAGACTTTTTACACACGTCTACCAGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLVLGKR*WLLEWP
Trigger: CGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCAC...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ATTTGCTTTCTTCCCACCCTGGCTCCTGGTCCTAGATGTCTTCCCCACAGGAAGCTATTCATCAGTACTTaGGTGTGTTGGAGACTCAGA +
Preference number: 5 (lower is better)
Translates to: ICFLPTLAPGPRCLPHRKLFIST*VCWRLR
Trigger: TCTGAGTCTCCAACACACCAAAGTACTGATGAATAG...CTTCCTGTGGGGAAGACATCTAGGACCAGGAGCCAGGGTGGGAAGAAAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp ACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGGGCCATGTTGGCCAGCTTaGAGGTCTTCAGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSNFLHVSNESNRGFKLGPCWPA*RSSGSL
Trigger: CAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGG...CCCCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CCTAGAGCGTTCATCACCAACCACAGCGACCATTTATTATGTCAGTCTCAAAGGGACTCGCTCCACATTTaGGGCTTTAAGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: PRAFITNHSDHLLCQSQRDSLHI*GFKGDL
Trigger: CAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTC...CCTTTGAGACTGACATAATAAATGGTCGCTGTGGTTGGTGATGAACGCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: FKLGTSSPLKETGMCKESTRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091497.11
CDS-3UTR CAA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGTGCTTCTTCAGTTTTTaGCTGACATTGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGCFFSF*LTLGSL
Trigger: CAGTGACCCCAATGTCAGCAAAAAACTGAAGAAGCA...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 90 bp TCACCTTCTCATAAGGCTCATCTAAAGATGACTCGCTCCACATTTTaGGCTTTAAGGGTGACTTGTCATAGTCGGTACGGTGATAGTGCA +
Preference number: 5 (lower is better)
Translates to: SPSHKAHLKMTRSTF*ALRVTCHSRYGDSA
Trigger: TGCACTATCACCGTACCGACTATGACAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTCATCTTTAGATGAGCCTTATGAGAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTACCGGCCCAGACTTTTaGGGGAAGTCATGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FKLGTSSPLKETGMCKESTGPDF*GKSCSR
Trigger: CCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGGT...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CATAGTCTTCTGGCTGAAACAAGCAATTTCTTACATGTATCCAACGAATCCAATACCGGCCCAGACTTTTaGGGGAAGTCATGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HSLLAETSNFLHVSNESNTGPDF*GKSCSR
Trigger: CCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGGT...ATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTTCAGCCAGAAGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTCTCTTCTACAGGAATTGCATGTGTTGGCTTTCCTGACAGTTTGTGGCCTGGGTTTAGGCAGGATTTTTaGTTCATCCAGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: FSSTGIACVGFPDSLWPGFRQDF*FIQLEG
Trigger: GCCTTCAAGCTGGATGAACAAAAAATCCTGCCTAAA...CCCAGGCCACAAACTGTCAGGAAAGCCAACACATGCAATTCCTGTAGAAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CAGAATCCAGTAAAATCATTTTACATGCTCTACAGTCAGTTTCAGGAGCAACCTATCAAGGAGATGTACTaGACATCGACGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: QNPVKSFYMLYSQFQEQPIKEMY*TSTALR
Trigger: ACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGAT...AGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATTTTACTGGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTATCAAGGAGATGTACTaGACATCGACGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLIKEMY*TSTALR
Trigger: ACGGAGGGCCGTCGATGTCAAGTACATCTCCTTGAT...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp TTTAAACTGGGGACTTCATCTCCCTTAAAAGAAACAGGGATGTGTAAAGAATCTAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCT +
Preference number: 5 (lower is better)
Translates to: FKLGTSSPLKETGMCKESSPQPA*SSWRSS
Trigger: AGATGAACGCCAACTACTCAACGCTGGCTGAGGACT...AGATTCTTTACACATCCCTGTTTCTTTTAAGGGAGATGAAGTCCCCAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTGGGAGAGTTTTCTGTaGCTTCTCCAGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLWESFL*LLQSAR
Trigger: CCTGGCAGACTGGAGAAGCAACAGAAAACTCTCCCA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075767.14
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp AAACAAGCAATTTCTTACATGTATCCAACGAATCCAATAGGGGCTTTAAACTGGTTTCACTGGACGGTGTaGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KQAISYMYPTNPIGALNWFHWTV*SFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAA...CCAGTTTAAAGCCCCTATTGGATTCGTTGGATACATGTAAGAAATTGCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000177457.8
CDS-3UTR CAA 90 bp CGAGTGCACACAAGTGTTAACAAACATAAAATGAACCACAACGGTAAAACACTTTTTCACTGGACGGTGTaGAGCTTCTCTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RVHTSVNKHKMNHNGKTLFHWTV*SFSGFE
Trigger: CTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAA...AAGTGTTTTACCGTTGTGGTTCATTTTATGTTTGTTAACACTTGTGTGCACTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GCTCTGGCTGTGCAGGTACACGCCACCTCCAGTGCTTaGAGCCCCGCTGCGGGCCGCCAGGTTGGGCATGCT +
Preference number: 6 (lower is better)
Translates to: ALAVQVHATSSA*SPAAGRQVGHA
Trigger: AGCATGCCCAACCTGGCGGCCCGCAGCGGGGCTGCAAGCACTGGAGGTGGCGTGTACCTGCACAGCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp CCGCAGGATCTGAGACCGAGATGGTGTAAGGCGGCCTaGATCCCCCTCGTCGCCACCCCCGCGCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: PQDLRPRWCKAA*IPLVATPAPAL
Trigger: GAGAGCTGGCGCGGGGGTGGCGACGAGGGGGATGCAGGCCGCCTTACACCATCTCGGTCTCAGATCCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TCATCAGACACGGCGGCACGGCCGGAGCCTTTGTCGTaGGCGCCGTCACGCCCCAACGAAGGAGTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSDTAARPEPLS*APSRPNEGVRR
Trigger: CCTGCGGACTCCTTCGTTGGGGCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGCCGCCGTGTCTGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 72 bp CGCAGCTCATCAGACACGGCGGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGCCCCAACGAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: RSSSDTAARPEP*SWAPSRPNEGV
Trigger: GACTCCTTCGTTGGGGCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGCCGCCGTGTCTGATGAGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 90 bp TACCACTGGCGCAGCTCATCAGACACGGCGGCACGGCCGGAGCCTTaGTCGTGGGCGCCGTCACGCCCCAACGAAGGAGTCCGCAGGATC +
Preference number: 6 (lower is better)
Translates to: YHWRSSSDTAARPEP*SWAPSRPNEGVRRI
Trigger: GATCCTGCGGACTCCTTCGTTGGGGCGTGACGGCGCCCACGACAAAGGCTCCGGCCGTGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp GCGCCGTCACGCCCCAACGAAGGAGTCCGCAGGATCTaGGACCGAGATGGTGTAAGGCGGCCTGCATCCCCC +
Preference number: 6 (lower is better)
Translates to: APSRPNEGVRRI*DRDGVRRPASP
Trigger: GGGGGATGCAGGCCGCCTTACACCATCTCGGTCTCAGATCCTGCGGACTCCTTCGTTGGGGCGTGACGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TGCTCCTTATGCGAGGCTGTGGAGCGCTGGTACCACTaGCGCAGCTCATCAGACACGGCGGCACGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: CSLCEAVERWYH*RSSSDTAARPE
Trigger: CTCCGGCCGTGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp CCCTGCTGTGCGCCACGAAGGTGCTCTGGGAAGAGGTaGTGTACTGAGAGCCGCTGTCCGAGGAGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: PCCAPRRCSGKR*CTESRCPRRWS
Trigger: GCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACAGCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp CCCCAACGAAGGAGTCCGCAGGATCTGAGACCGAGATaGTGTAAGGCGGCCTGCATCCCCCTCGTCGCCACC +
Preference number: 6 (lower is better)
Translates to: PQRRSPQDLRPR*CKAACIPLVAT
Trigger: GGTGGCGACGAGGGGGATGCAGGCCGCCTTACACCATCTCGGTCTCAGATCCTGCGGACTCCTTCGTTGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp CAGCTGACGTGGCCTTGCACATCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGAAGGTGCTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: QLTWPCTSGASW*PCCAPRRCSGK
Trigger: CTTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GTGGAGCTGGTGTGTGACAGACGGCTGTGCTCCTTATaGGAGGCTGTGGAGCGCTGGTACCACTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: VELVCDRRLCSL*EAVERWYHWRS
Trigger: GCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp AGCTCGAGTGGCTGGTGCAGGACGAGCAGTCGTCCATaGGGTCTGAGCCATTGCTGCTACGAGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SSSGWCRTSSRP*GLSHCCYESSG
Trigger: CCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp AGACGGCTGTGCTCCTTATGCGAGGCTGTGGAGCGCTaGTACCACTGGCGCAGCTCATCAGACACGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RRLCSLCEAVER*YHWRSSSDTAA
Trigger: TGCCGCCGTGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 72 bp CCTGCCTCGGTACAGCTTCCTGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCGTGGGAGGAGCGTTTC +
Preference number: 6 (lower is better)
Translates to: PASVQLPVLGKR*WLLEWPWEERF
Trigger: GAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 90 bp GCCGCTGTCGCTGCCGCGCCTTGGACGGCGAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCTGTGCTGGGTAGTAGTGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: AAVAAAPWTASPQPA*SSWRSSVLGSSALS
Trigger: GCTCAGAGCACTACTACCCAGCACAGATGAACGCCAACTACTCAACGCTGGCTGAGGACTCGCCGTCCAAGGCGCGGCAGCGACAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp CTGAGAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGTaGCAGACGGCTGTGCTCCTTATGCGAGGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LRAAVRGGGAGV*QTAVLLMRGCG
Trigger: TCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp TGCGCCACGAAGGTGCTCTGGGAAGAGGTGCTGTACTaGGAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: CATKVLWEEVLY*EPLSEEVELVC
Trigger: ACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp TCCGAGGAGGTGGAGCTGGTGTGTGACAGACGGCTGTaGTCCTTATGCGAGGCTGTGGAGCGCTGGTACCAC +
Preference number: 6 (lower is better)
Translates to: SEEVELVCDRRL*SLCEAVERWYH
Trigger: GTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GCCTTGCACATCTGGGGCATCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGGGAAGAGGTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: ALHIWGILVTLL*ATKVLWEEVLY
Trigger: GTACAGCACCTCTTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp AGCTGCTTACTCCTGCCTCGGTACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGCTGGAATGGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: SCLLLPRYSFLC*GSACGCWNGRG
Trigger: CCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp CTTCCGGTGTCGTTCTCCGAGCCCAGGAGCTTGCCCTaGGACTCCAGGCTGGAGCTTCGATGCCTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: LPVSFSEPRSLP*DSRLELRCLKC
Trigger: GCACTTTAGGCATCGAAGCTCCAGCCTGGAGTCCCAGGGCAAGCTCCTGGGCTCGGAGAACGACACCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp GTGGCTGGTGCAGGACGAGCAGTCGTCCATGGGGTCTaGGCCATTGCTGCTACGAGTCCTCGGGGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: VAGAGRAVVHGV*AIAATSPRGVE
Trigger: TTCTACACCCCGAGGACTCGTAGCAGCAATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp CGGTACAGCTTCCTGTGCTGGGGAAGCGCTTGTGGCTaGTGGAATGGCCGTGGGAGGAGCGTTTCTTCACCT +
Preference number: 6 (lower is better)
Translates to: RYSFLCWGSACG*WNGRGRSVSSP
Trigger: AGGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp AGGAGCTGCTTACTCCTGCCTCGGTACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGCTGCTGGAATGGCCGT +
Preference number: 6 (lower is better)
Translates to: RSCLLLPRYSFL*WGSACGCWNGR
Trigger: ACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GTGCTGGGTAGTAGTGCTCTGAGCTCGAGTGGCTGGTaGAGGACGAGCAGTCGTCCATGGGGTCTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: VLGSSALSSSGW*RTSSRPWGLSH
Trigger: ATGGCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACTACTACCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp CGGACGCGCAGGTCTGGGGTGGATGGCATGCTAGACTaGGAATTCCAATGTGGGAGGCTTCGGATGGGACTG +
Preference number: 6 (lower is better)
Translates to: RTRRSGVDGMLD*EFQCGRLRMGL
Trigger: CAGTCCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TCTGTGCTGGGTAGTAGTGCTCTGAGCTCGAGTGGCTaGTGCAGGACGAGCAGTCGTCCATGGGGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: SVLGSSALSSSG*CRTSSRPWGLS
Trigger: GCTCAGACCCCATGGACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACTACTACCCAGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 72 bp GCTGCCGCGCCTTGGACGGCGAGTCCTCAGCCAGCGTaGAGTAGTTGGCGTTCATCTGTGCTGGGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: AAAPWTASPQPA*SSWRSSVLGSS
Trigger: ACTACTACCCAGCACAGATGAACGCCAACTACTCAACGCTGGCTGAGGACTCGCCGTCCAAGGCGCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 90 bp CTGCTTACTCCTGCCTCGGTACAGCTTCCTGTGCTGGGGAAGCGCTaGTGGCTGCTGGAATGGCCGTGGGAGGAGCGTTTCTTCACCTTC +
Preference number: 6 (lower is better)
Translates to: LLTPASVQLPVLGKR*WLLEWPWEERFFTF
Trigger: GAAGGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GGACACGCATACCAGGTGTGCACGGCAATGCCACTGTaGCCAAAAGTCCTCCTGGTCACTGAAGCCCTGCGA +
Preference number: 6 (lower is better)
Translates to: GHAYQVCTAMPL*PKVLLVTEALR
Trigger: TCGCAGGGCTTCAGTGACCAGGAGGACTTTTGGGCACAGTGGCATTGCCGTGCACACCTGGTATGCGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000177457.8
CDS GCA 72 bp GTGGGAGGCTTCGGATGGGACTGTTCTGCAAGGAGCTaGTTACTCCTGCCTCGGTACAGCTTCCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: VGGFGWDCSARS*LLLPRYSFLCW
Trigger: CCAGCACAGGAAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GGACTCCAGGCTGGAGCTTCGATGCCTAAAGTGCAGTaGAAGGCTGTGCAGTCTCGTGGGGCTGATGTCCAC +
Preference number: 6 (lower is better)
Translates to: GLQAGASMPKVQ*KAVQSRGADVH
Trigger: GTGGACATCAGCCCCACGAGACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAGCTCCAGCCTGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp ATAGTGGGGACTCCGGACGCGCAGGTCTGGGGTGGATaGCATGCTAGACTGGGAATTCCAATGTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: IVGTPDAQVWGG*HARLGIPMWEA
Trigger: AGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGGAGTCCCCACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TGTGTGACAGACGGCTGTGCTCCTTATGCGAGGCTGTaGAGCGCTGGTACCACTGGCGCAGCTCATCAGACA +
Preference number: 6 (lower is better)
Translates to: CVTDGCAPYARL*SAGTTGAAHQT
Trigger: TGTCTGATGAGCTGCGCCAGTGGTACCAGCGCTCCACAGCCTCGCATAAGGAGCACAGCCGTCTGTCACACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 90 bp CCTGAGGACAGCAGACTCCCACTGCTCCCGCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGCTTTGAGGTCTTCAGGGTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: PEDSRLPLLPLMIFP*LPMLASFEVFRVPV
Trigger: AACAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAGCGGGAGCAGTGGGAGTCTGCTGTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CAA 90 bp AGACTCCCACTGCTCCCGCTGATGATCTTCCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTCAGGGTCCCTGTTTCCGTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: RLPLLPLMIFPLLPM*ASFEVFRVPVSVRS
Trigger: TGACCTGACGGAAACAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAGCGGGAGCAGTGGGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS TCA 72 bp GTAGTTGGCGTTCATCTGTGCTGGGTAGTAGTGCTCTaGGCTCGAGTGGCTGGTGCAGGACGAGCAGTCGTC +
Preference number: 6 (lower is better)
Translates to: VVGVHLCWVVVL*ARVAGAGRAVV
Trigger: GACGACTGCTCGTCCTGCACCAGCCACTCGAGCTCAGAGCACTACTACCCAGCACAGATGAACGCCAACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TACAGCTTCCTGTGCTGGGGAAGCGCTTGTGGCTGCTaGAATGGCCGTGGGAGGAGCGTTTCTTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: YSFLCWGSACGC*NGRGRSVSSPS
Trigger: AGAAGGTGAAGAAACGCTCCTCCCACGGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp CCTTGGACGGCGAGTCCTCAGCCAGCGTTGAGTAGTTaGCGTTCATCTGTGCTGGGTAGTAGTGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: PWTASPQPALSS*RSSVLGSSALS
Trigger: GCTCAGAGCACTACTACCCAGCACAGATGAACGCCAACTACTCAACGCTGGCTGAGGACTCGCCGTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp AAGAGGTGCTGTACTGAGAGCCGCTGTCCGAGGAGGTaGAGCTGGTGTGTGACAGACGGCTGTGCTCCTTAT +
Preference number: 6 (lower is better)
Translates to: KRCCTESRCPRR*SWCVTDGCAPY
Trigger: ATAAGGAGCACAGCCGTCTGTCACACACCAGCTCCACCTCCTCGGACAGCGGCTCTCAGTACAGCACCTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp GGTGGGGGCTGCTTGGTGGGGTGGCTCCAATTTCACTaGACGGTGTTGAGCTTCTCTGGCTTTGAGGTAAGG +
Preference number: 6 (lower is better)
Translates to: GGGCLVGWLQFH*TVLSFSGFEVR
Trigger: CCTTACCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCACCCCACCAAGCAGCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 72 bp CTGCTCCCGCTGATGATCTTCCCCTTGCTCCCCATGTaGGCCAGCTTTGAGGTCTTCAGGGTCCCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: LLPLMIFPLLPM*ASFEVFRVPVS
Trigger: GGAAACAGGGACCCTGAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAGCGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CAA 72 bp AGCAGACTCCCACTGCTCCCGCTGATGATCTTCCCCTaGCTCCCCATGTTGGCCAGCTTTGAGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRLPLLPLMIFP*LPMLASFEVFR
Trigger: CCTGAAGACCTCAAAGCTGGCCAACATGGGGAGCAAGGGGAAGATCATCAGCGGGAGCAGTGGGAGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS GCA 72 bp TCAATGCCGGACACGCATACCAGGTGTGCACGGCAATaGCACTGTGCCCAAAAGTCCTCCTGGTCACTGAAG +
Preference number: 6 (lower is better)
Translates to: SMPDTHTRCARQ*HCAQKSSWSLK
Trigger: CTTCAGTGACCAGGAGGACTTTTGGGCACAGTGGCATTGCCGTGCACACCTGGTATGCGTGTCCGGCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000177457.8
CDS GCA 72 bp CTGGAGCTTCGATGCCTAAAGTGCAGTGCAAGGCTGTaGAGTCTCGTGGGGCTGATGTCCACTGACCTTGTG +
Preference number: 6 (lower is better)
Translates to: LELRCLKCSARL*SLVGLMSTDLV
Trigger: CACAAGGTCAGTGGACATCAGCCCCACGAGACTGCACAGCCTTGCACTGCACTTTAGGCATCGAAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TTGAGGTCTTCAGGGTCCCTGTTTCCGTCAGGTCAATaGCGATCTCGCTCAGACTTCGGGCCGCATGGATCT +
Preference number: 6 (lower is better)
Translates to: LRSSGSLFPSGQ*RSRSDFGPHGS
Trigger: AGATCCATGCGGCCCGAAGTCTGAGCGAGATCGCCATTGACCTGACGGAAACAGGGACCCTGAAGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 72 bp GGAATGAACATAGTGGGGACTCCGGACGCGCAGGTCTaGGGTGGATGGCATGCTAGACTGGGAATTCCAATG +
Preference number: 6 (lower is better)
Translates to: GMNIVGTPDAQV*GGWHARLGIPM
Trigger: CATTGGAATTCCCAGTCTAGCATGCCATCCACCCCAGACCTGCGCGTCCGGAGTCCCCACTATGTTCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS TCA 72 bp ATGTCTTTCTTGGCCGACTGCGAGCTATCTGATTCCTaGGAACCTGAGGACAGCAGACTCCCACTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: MSFLADCELSDS*EPEDSRLPLLP
Trigger: CGGGAGCAGTGGGAGTCTGCTGTCCTCAGGTTCTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS GCA 72 bp ATGGACTTGATCAATGCCGGACACGCATACCAGGTGTaGACGGCAATGCCACTGTGCCCAAAAGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: MDLINAGHAYQV*TAMPLCPKVLL
Trigger: CAGGAGGACTTTTGGGCACAGTGGCATTGCCGTGCACACCTGGTATGCGTGTCCGGCATTGATCAAGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000177457.8
CDS CCA 72 bp TGGGGTGGATGGCATGCTAGACTGGGAATTCCAATGTaGGAGGCTTCGGATGGGACTGTTCTGCAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: WGGWHARLGIPM*EASDGTVLQGA
Trigger: AGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATTCCCAGTCTAGCATGCCATCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp GACATCGACGGCCCTCCGTCATCTGGTAGACAGCATTaGGGATGCACCACGGTTTTAACATCAGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: DIDGPPSSGRQH*GCTTVLTSAAD
Trigger: GTCTGCAGCTGATGTTAAAACCGTGGTGCATCCCCAATGCTGTCTACCAGATGACGGAGGGCCGTCGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175944.8
CDS CAA 72 bp CTGACACAGAAGTACAGAACCACCGGCCCAGACTTTTaGGGGAAGTCATGCTCCAGGACTCTCCGATCGAGC +
Preference number: 6 (lower is better)
Translates to: LTQKYRTTGPDF*GKSCSRTLRSS
Trigger: GCTCGATCGGAGAGTCCTGGAGCATGACTTCCCCAAAAAGTCTGGGCCGGTGGTTCTGTACTTCTGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000115037.9
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176803.8
ENSMUST00000177457.8
CDS CAA 72 bp CTGTTGTGTGATGAAGGTGGCCGAGGAGGGAGTCCCTaGTGTGGCGACTGTAAGGGGGATATTGTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LLCDEGGRGGSP*CGDCKGDIVLV
Trigger: TACCAGCACAATATCCCCCTTACAGTCGCCACACAAGGGACTCCCTCCTCGGCCACCTTCATCACACAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CAA 72 bp TGCTTGGTGGGGTGGCTCCAATTTCACTGGACGGTGTaGAGCTTCTCTGGCTTTGAGGTAAGGCAGCTGACG +
Preference number: 6 (lower is better)
Translates to: CLVGWLQFHWTV*SFSGFEVRQLT
Trigger: CGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTCAACACCGTCCAGTGAAATTGGAGCCACCCCACCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp GAATTCCAATGTGGGAGGCTTCGGATGGGACTGTTCTaGAAGGAGCTGCTTACTCCTGCCTCGGTACAGCTT +
Preference number: 6 (lower is better)
Translates to: EFQCGRLRMGLF*KELLTPASVQL
Trigger: AAGCTGTACCGAGGCAGGAGTAAGCAGCTCCTTGCAGAACAGTCCCATCCGAAGCCTCCCACATTGGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp CGACGGCCCTCCGTCATAAACACATCCATGAACAGGTaGTCCAGTGTCATCTCGAAGTCATCCAGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: RRPSVINTSMNR*SSVISKSSSLA
Trigger: TGCCAGACTGGATGACTTCGAGATGACACTGGAGCACCTGTTCATGGATGTGTTTATGACGGAGGGCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239018.2
CDS TCA 72 bp TGTGGCGACTGTAAGGGGGATATTGTGCTGGTAACCTaGGAGTCTTCATCTTCCAGAACGAGGGCATCCGAG +
Preference number: 6 (lower is better)
Translates to: CGDCKGDIVLVT*ESSSSRTRASE
Trigger: CTCGGATGCCCTCGTTCTGGAAGATGAAGACTCTCAGGTTACCAGCACAATATCCCCCTTACAGTCGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS GCA 72 bp TTAACATCAGCTGCAGACGATGTAGGTTTCCTTCCCTaGAAGTCCTTAGTAGCCGGCAAGCAAGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: LTSAADDVGFLP*KSLVAGKQGPS
Trigger: GCTGGGACCTTGCTTGCCGGCTACTAAGGACTTGCAGGGAAGGAAACCTACATCGTCTGCAGCTGATGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175944.8
CDS CCA 72 bp CCTGCCTGGATTTCAAGGCAGCCAACATGTCTTTCTTaGCCGACTGCGAGCTATCTGATTCCTGAGAACCTG +
Preference number: 6 (lower is better)
Translates to: PAWISRQPTCLS*PTASYLIPENL
Trigger: CAGGTTCTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAAGACATGTTGGCTGCCTTGAAATCCAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 72 bp CTTGAAGGCTGTTCCAATTCTCCTCCGAACAATAGGTaGTTCCTCGCCTGGATCCAGGGGATATTCCACAGG +
Preference number: 6 (lower is better)
Translates to: LEGCSNSPPNNR*FLAWIQGIFHR
Trigger: CCTGTGGAATATCCCCTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGGAGAATTGGAACAGCCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS CCA 72 bp TGGCGATCTCGCTCAGACTTCGGGCCGCATGGATCTTaGACTTACTCTGCTTTCTGTCCAGATAGAACTGAT +
Preference number: 6 (lower is better)
Translates to: WRSRSDFGPHGS*TYSAFCPDRTD
Trigger: ATCAGTTCTATCTGGACAGAAAGCAGAGTAAGTCCAAGATCCATGCGGCCCGAAGTCTGAGCGAGATCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000177457.8
CDS CCA 72 bp TCCAATTCTCCTCCGAACAATAGGTGGTTCCTCGCCTaGATCCAGGGGATATTCCACAGGCAATTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: SNSPPNNRWFLA*IQGIFHRQFSC
Trigger: ACAGGAAAATTGCCTGTGGAATATCCCCTGGATCCAGGCGAGGAACCACCTATTGTTCGGAGGAGAATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000175944.8
ENSMUST00000176828.8
ENSMUST00000176864.3
ENSMUST00000177457.8
CDS TCA 72 bp CGAGCTGGAGCCAATTCAAGTGTCCCGTCTCATCTGTaGATGCTATTCCAAAGTACTCCTTCTCCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: RAGANSSVPSHL*MLFQSTPSPSG
Trigger: ACCTGAAGGAGAAGGAGTACTTTGGAATAGCATTCACAGATGAGACGGGACACTTGAATTGGCTCCAGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000115037.9
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176803.8
ENSMUST00000177457.8
CDS TCA 72 bp TGTCCTTCAGGTAGGAGATGCTCTCTATGTAGAATCTaGCACAGAAGTACAGAACCACCGGCCCAGACTTTT +
Preference number: 6 (lower is better)
Translates to: CPSGRRCSLCRI*HRSTEPPAQTF
Trigger: AAAAGTCTGGGCCGGTGGTTCTGTACTTCTGTGTCAGATTCTACATAGAGAGCATCTCCTACCTGAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000115037.9
ENSMUST00000175669.8
ENSMUST00000175944.8
ENSMUST00000176803.8
ENSMUST00000177457.8
CDS CCA 72 bp CATAAGGCTCATCTAAAGATGACTCGCTCCACATTTTaGGCTTTAAGGGTGACTTGTCATAGTCGGTACGGT +
Preference number: 6 (lower is better)
Translates to: HKAHLKMTRSTF*ALRVTCHSRYG
Trigger: ACCGTACCGACTATGACAAGTCACCCTTAAAGCCCAAAATGTGGAGCGAGTCATCTTTAGATGAGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075767.14
ENSMUST00000091497.11
ENSMUST00000176828.8
ENSMUST00000177457.8